Modulation of gut microbiota dysbioses in type 2 diabetic patients by macrobiotic Ma-Pi 2 diet

British Journal of Nutrition

Volumn 116, Issue 1, 2016, Pages 80-93

  Candela, Marco ^a   Biagi, Elena ^a   Soverini, Matteo ^a   Consolandi, Clarissa ^b   Quercia, Sara ^a   Severgnini, Marco ^b   Peano, Clelia ^b   Turroni, Silvia ^a   Rampelli, Simone ^a   Pozzilli, Paolo ^c   Pianesi, Mario ^d   Fallucca, Francesco ^e   Brigidi, Patrizia ^a  

^a UNIVERSITY OF BOLOGNA   (Italy)

^b INSTITUTE OF BIOMEDICAL TECHNOLOGIES   (Italy)

^c UNIVERSITY CAMPUS BIO MEDICO   (Italy)

^d Agriculture   (Italy)

^e SAPIENZA UNIVERSITY OF ROME   (Italy)

Author keywords

Dysbiosis; Fibre rich diets; Gut microbiota; Macrobiotic diets; Type 2 diabetes

Indexed keywords

RIBOSOME RNA; SHORT CHAIN FATTY ACID;

ADULT; AGED; AKKERMANSIA; ARTICLE; BACTEROIDES; CLINICAL EFFECTIVENESS; COLLINSELLA; CONTROLLED STUDY; DIABETIC PATIENT; DIET THERAPY; DYSBIOSIS; FAECALIBACTERIUM; FECES ANALYSIS; FEMALE; HUMAN; INTESTINE FLORA; LACHNOSPIRA; MACROBIOTIC DIET; MAJOR CLINICAL STUDY; MALE; METABOLIC REGULATION; METAGENOMICS; MICROBIAL COMMUNITY; MICROBIAL DIVERSITY; NON INSULIN DEPENDENT DIABETES MELLITUS; RNA SEQUENCE; ROSEBURIA; STREPTOCOCCUS; BACTERIUM; CLASSIFICATION; INTESTINE; MICROBIOLOGY; MICROFLORA; MIDDLE AGED; OBESITY; YOUNG ADULT;

ADULT; AGED; BACTERIA; DIABETES MELLITUS, TYPE 2; DIET, MACROBIOTIC; FEMALE; HUMANS; INTESTINES; MALE; MICROBIOTA; MIDDLE AGED; OVERWEIGHT; YOUNG ADULT;

EID: 84965026274     PISSN: 00071145     EISSN: 14752662     Source Type: Journal    
DOI: 10.1017/S0007114516001045     Document Type: Article

References (58)

1. Xu Y (2013) Prevalence and control of diabetes in Chinese adults. JAMA 310, 948
2. Zhang P, Zhang X, Brown J, et al. (2010) Global healthcare expenditure on diabetes for 2010 and 2030. Diabetes Res Clin Pract 87, 293-301
3. Zhang X, Shen D, Fang Z, et al. (2013) Human gut microbiota changes reveal the progression of glucose intolerance. PLOS ONE 8, e71108
4. Xu Z, Malmer D, Langille MGI, et al. (2014) Which is more important for classifying microbial communities: who's there or what they can do? ISME J 8, 2357-2359
5. Qin J, Li R, Raes J, et al. (2010) A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464, 59-65
6. Karlsson FH, Tremaroli V, Nookaew I, et al. (2013) Gut metagenome in European women with normal, impaired and diabetic glucose control. Nature 498, 99-103
7. Larsen N, Vogensen FK, Berg FWJ, et al. (2010) Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults. PLoS ONE 5, e9085
8. Tremaroli V &Bäckhed F (2012) Functional interactions between the gut microbiota and host metabolism. Nature 489, 242-249
9. De Vadder F, Kovatcheva-Datchary P, Goncalves D, et al. (2014) Microbiota-generated metabolites promote metabolic benefits via gut-brain neural circuits. Cell 156, 84-96
10. Backhed F, Ding H, Wang T, et al. (2004) The gut microbiota as an environmental factor that regulates fat storage. Proc Natl Acad Sci U S A 101, 15718-15723
11. Tilg H &Moschen AR (2014) Microbiota and diabetes: an evolving relationship. Gut 63, 1513-1521
12. Khan MT, Nieuwdorp M &Bäckhed F (2014) Microbial modulation of insulin sensitivity. Cell Metab 20, 753-760
13. Amar J, Chabo C, Waget A, et al. (2011) Intestinal mucosal adherence and translocation of commensal bacteria at the early onset of type 2 diabetes: molecular mechanisms and probiotic treatment. EMBO Mol Med 3, 559-572
14. Burcelin R (2012) Regulation of metabolism: a cross talk between gut microbiota and its human host. Physiology (Bethesda) 27, 300-307
15. Cani PD, Amar J, Iglesias MA, et al. (2007) Metabolic endotoxemia initiates obesity and insulin resistance. Diabetes 56, 1761-1772
16. Everard A &Cani PD (2013) Diabetes, obesity and gut microbiota. Best Pract Res Clin Gastroenterol 27, 73-83
17. Karlsson F, Tremaroli V, Nielsen J, et al. (2013) Assessing the human gut microbiota in metabolic diseases. Diabetes 62, 3341-3349
18. Turnbaugh PJ, Hamady M, Yatsunenko T, et al. (2009) A core gut microbiome in obese and lean twins. Nature 457, 480-484
19. David LA, Maurice CF, Carmody RN, et al. (2013) Diet rapidly and reproducibly alters the human gut microbiome. Nature 505, 559-563
20. He C, Shan Y &Song W (2015) Targeting gut microbiota as a possible therapy for diabetes. Nutr Res 35, 361-367
21. Soare A, Khazrai YM, Del Toro R, et al. (2014) The effect of the macrobiotic Ma-Pi 2 diet vs. the recommended diet in the management of type 2 diabetes: the randomized controlled MADIAB trial. Nutr Metab 11, 39
22. Craig WJ &Mangels AR, &American Dietetic Association (2009) Position of the American Dietetic Association: vegetarian diets. J Am Diet Assoc 9, 1266-1282
23. Centanni M, Turroni S, Consolandi C, et al. (2013) The enterocyte-associated intestinal microbiota of breast-fed infants and adults responds differently to a TNF-α-mediated pro-inflammatory stimulus. PLOS ONE 8, e81762
24. Klindworth A, Pruesse E, Schweer T, et al. (2013) Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies. Nucleic Acids Res 41, e1
25. Masella AP, Bartram AK, Truszkowski JM, et al. (2012) PANDAseq: paired-end assembler for illumina sequences. BMC Bioinformatics 3, 31
26. Caporaso JG, Kuczynski J, Stombaugh J, et al. (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7, 335-336
27. Edgar RC (2010) Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26, 2460-2461
28. Langille MGI, Zaneveld J, Caporaso JG, et al. (2013) Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat Biotechnol 31, 814-821
29. Kanehisa M, Goto S, Sato Y, et al. (2012) KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids Res 40, D109-D114
30. Asnicar F, Weingart G, Tickle TL, et al. (2015) Compact graphical representation of phylogenetic data and metadata with GraPhlAn. PeerJ 3, e1029
31. Lozupone CA, Stombaugh J, Gonzalez A, et al. (2013) Meta-analyses of studies of the human microbiota. Genome Res 23, 1704-1714
32. Marchesi JR, Dutilh BE, Hall N, et al. (2011) Towards the human colorectal cancer microbiome. PLoS ONE 6, e20447
33. Morgan XC, Tickle TL, Sokol H, et al. (2012) Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment. Genome Biol 13, R79
34. Thams P &Capito K (1999) L-arginine stimulation of glucoseinduced insulin secretion through membrane depolarization and independent of nitric oxide. Eur J Endocrinol 140, 87-93
35. Holmes E, Loo RL, Stamler J, et al. (2008) Human metabolic phenotype diversity and its association with diet and blood pressure. Nature 453, 396-400
36. Nicholson JK, Holmes E, Kinross J, et al. (2012) Host-gut microbiota metabolic interactions. Science 336, 1262-1267
37. Sorrell TC, Muller M &Sztelma K (1992) Bacterial metabolism of human polymorphonuclear leukocyte-derived arachidonic acid. Infect Immun 60, 1779-1785
38. Ridley CP, Lee HY &Khosla C (2008) Evolution of polyketide synthases in bacteria. Proc Natl Acad Sci U S A 105, 4595-4600
39. Faber F &Bäumler AJ (2014) The impact of intestinal inflammation on the nutritional environment of the gut microbiota. Immunol Lett 162, 48-53
40. Wieland Brown LC, Penaranda C, Kashyap PC, et al. (2013) Production of α-galactosylceramide by a prominent member of the human gut microbiota. PLoS Biol 11, e1001610
41. Biagi E, Nylund L, Candela M, et al. (2010) Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians. PLoS ONE 5, e10667
42. Tong M, Li X, Wegener Parfrey L, et al. (2013) A modular organization of the human intestinal mucosal microbiota and its association with inflammatory bowel disease. PLOS ONE 8, e80702
43. Joossens M, Huys G, Cnockaert M, et al. (2011) Dysbiosis of the faecal microbiota in patients with Crohn's disease and their unaffected relatives. Gut 5, 631-637
44. Karlsson FH, Fåk F, Nookaew I, et al. (2012) Symptomatic atherosclerosis is associated with an altered gut metagenome. Nat Commun 3, 1245
45. Jiang W, Wu N, Wang X, et al. (2015) Dysbiosis gut microbiota associated with inflammation and impaired mucosal immune function in intestine of humans with non-alcoholic fatty liver disease. Sci Rep 5, 8096
46. Kamada N, Seo SU, Chen GY, et al. (2013) Role of the gut microbiota in immunity and inflammatory disease. Nat Rev Immunol 13, 321-335
47. Qin J, Li Y, Cai Z, et al. (2012) A metagenome-wide association study of gut microbiota in type 2 diabetes. Nature 490, 55-60
48. Flint HJ, Duncan SH, Scott KP, et al. (2015) Links between diet, gut microbiota composition and gut metabolism. Proc Nutr Soc 74, 13-22
49. Russell WR, Hoyles L, Flint HJ, et al. (2013) Colonic bacterial metabolites and human health. Curr Opin Microbiol 16, 246-254
50. Trompette A, Gollwitzer ES, Yadava K, et al. (2014) Gut microbiota metabolism of dietary fiber influences allergic airway disease and hematopoiesis. Nat Med 20, 159-166
51. Segain JP, Raingeard Blétière D, Bourreille A, et al. (2000) Butyrate inhibits inflammatory responses through NFkappaB inhibition: implications for Crohn's disease. Gut 47, 397-403
52. Johnson AMF &Olefsky JM (2013) The origins and drivers of insulin resistance. Cell 152, 673-684
53. Sonnenburg ED &Sonnenburg JL (2014) Starving our microbial self: the deleterious consequences of a diet deficient in microbiota-accessible carbohydrates. Cell Metab 20, 779-786
54. Everard A, Belzer C, Geurts L, et al. (2013) Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity. Proc Natl Acad Sci U S A 110, 9066-9071
55. Xu J, Lian F, Zhao L, et al. (2015) Structural modulation of gut microbiota during alleviation of type 2 diabetes with a Chinese herbal formula. ISME J 9, 552-562
56. Brahe LK, Le Chatelier E, Prifti E, et al. (2015) Specific gut microbiota features and metabolic markers in postmenopausal women with obesity. Nutr Diabetes 5, e159
57. Donath MY &Shoelson SE (2011) Type 2 diabetes as an inflammatory disease. Nat Rev Immunol 11, 98-107
58. Schnorr SL, Candela M, Rampelli S, et al. (2014) Gut microbiome of the Hadza hunter-gatherers. Nat Commun 5, 3654