-
1
-
-
0021144092
-
Bacterial glycogen synthesis and its regulation
-
COI: 1:CAS:528:DyaL2cXmtVOhtrk%3D, PID: 6093684
-
Preiss J (1984) Bacterial glycogen synthesis and its regulation. Annu Rev Microbiol 38:419–458. doi:10.1146/annurev.mi.38.100184.002223
-
(1984)
Annu Rev Microbiol
, vol.38
, pp. 419-458
-
-
Preiss, J.1
-
2
-
-
0142040430
-
From bacterial glycogen to starch: understanding the biogenesis of the plant starch granule
-
COI: 1:CAS:528:DC%2BD3sXntFSgu7o%3D, PID: 14502990
-
Ball SG, Morell KM (2003) From bacterial glycogen to starch: understanding the biogenesis of the plant starch granule. Annu Rev Plant Biol 54:207–233. doi:10.1146/annurev.arplant.54.031902.134927
-
(2003)
Annu Rev Plant Biol
, vol.54
, pp. 207-233
-
-
Ball, S.G.1
Morell, K.M.2
-
3
-
-
84922753905
-
Starch biosynthesis in rice endosperm
-
Fujita N (2014) Starch biosynthesis in rice endosperm. AGri Biosci Monogr 4:1–18. doi:10.5047/agbm.2014.00401.0001
-
(2014)
AGri Biosci Monogr
, vol.4
, pp. 1-18
-
-
Fujita, N.1
-
4
-
-
84930146241
-
A review of starch-branching enzymes and their role in amylopectin biosynthesis
-
COI: 1:CAS:528:DC%2BC2cXhsVyrsb%2FN, PID: 25196474
-
Tetlow IJ, Emes MJ (2014) A review of starch-branching enzymes and their role in amylopectin biosynthesis. IUBMB Life 66:546–558. doi:10.1002/iub.1297
-
(2014)
IUBMB Life
, vol.66
, pp. 546-558
-
-
Tetlow, I.J.1
Emes, M.J.2
-
5
-
-
0032964202
-
X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the α-amylase family
-
COI: 1:CAS:528:DyaK1MXjtlajsrg%3D, PID: 10331869
-
Uitdehaag JC, Mosi R, Kalk KH, van der Veen BA, Dijkhuizen L, Withers SG, Dijkstra BW (1999) X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the α-amylase family. Nat Struct Biol 6:432–436. doi:10.1038/8235
-
(1999)
Nat Struct Biol
, vol.6
, pp. 432-436
-
-
Uitdehaag, J.C.1
Mosi, R.2
Kalk, K.H.3
van der Veen, B.A.4
Dijkhuizen, L.5
Withers, S.G.6
Dijkstra, B.W.7
-
6
-
-
79952804176
-
Thermus thermophilus glycoside hydrolase family 57 branching enzyme: crystal structure, mechanism of action, and products formed
-
COI: 1:CAS:528:DC%2BC3MXhtFKktrY%3D, PID: 21097495
-
Palomo M, Pijning T, Booiman T, Dobruchowska JM, van der Vlist J, Kralj S, Planas A, Loos K, Kamerling JP, Dijkstra BW, van der Maarel MJ, Dijkhuizen L, Leemhuis H (2011) Thermus thermophilus glycoside hydrolase family 57 branching enzyme: crystal structure, mechanism of action, and products formed. J Biol Chem 286:3520–3530. doi:10.1074/jbc.M110.179515
-
(2011)
J Biol Chem
, vol.286
, pp. 3520-3530
-
-
Palomo, M.1
Pijning, T.2
Booiman, T.3
Dobruchowska, J.M.4
van der Vlist, J.5
Kralj, S.6
Planas, A.7
Loos, K.8
Kamerling, J.P.9
Dijkstra, B.W.10
van der Maarel, M.J.11
Dijkhuizen, L.12
Leemhuis, H.13
-
7
-
-
29344449390
-
Common evolutionary origin of starch biosynthetic enzymes in green and red algae
-
Parton NJ, Keeling PJ (2005) Common evolutionary origin of starch biosynthetic enzymes in green and red algae. J Phycol 41:1131–1141. doi:10.1111/j.1529-8817.2005.00135.x
-
(2005)
J Phycol
, vol.41
, pp. 1131-1141
-
-
Parton, N.J.1
Keeling, P.J.2
-
8
-
-
39749173052
-
Metabolic symbiosis and the birth of the plant kingdom
-
COI: 1:CAS:528:DC%2BD1cXjt1CltLc%3D, PID: 18093994
-
Deschamps P, Colleoni C, Nakamura Y, Suzuki E, Putaux JL, Buléon A, Haebel S, Ritte G, Steup M, Falcón LI, Moreira D, Löffelhardt W, Raj JN, Plancke C, d’Hulst C, Dauvillée D, Ball S (2008) Metabolic symbiosis and the birth of the plant kingdom. Mol Biol Evol 25:536–548. doi:10.1093/molbev/msm280
-
(2008)
Mol Biol Evol
, vol.25
, pp. 536-548
-
-
Deschamps, P.1
Colleoni, C.2
Nakamura, Y.3
Suzuki, E.4
Putaux, J.L.5
Buléon, A.6
Haebel, S.7
Ritte, G.8
Steup, M.9
Falcón, L.I.10
Moreira, D.11
Löffelhardt, W.12
Raj, J.N.13
Plancke, C.14
d’Hulst, C.15
Dauvillée, D.16
Ball, S.17
-
9
-
-
0023025007
-
Biosynthesis of bacterial glycogen. Primary structure of Escherichia coli 1,4-α-d-glucan:1,4-α-d-glucan 6-α-d-(1,4-α-d-glucano)-transferase as deduced from the nucleotide sequence of the glg B gene
-
COI: 1:CAS:528:DyaL28XltV2lt7o%3D, PID: 3013861
-
Baecker PA, Greenberg E, Preiss J (1986) Biosynthesis of bacterial glycogen. Primary structure of Escherichia coli 1,4-α-d-glucan:1,4-α-d-glucan 6-α-d-(1,4-α-d-glucano)-transferase as deduced from the nucleotide sequence of the glg B gene. J Biol Chem 261:8738–8743
-
(1986)
J Biol Chem
, vol.261
, pp. 8738-8743
-
-
Baecker, P.A.1
Greenberg, E.2
Preiss, J.3
-
10
-
-
0023841829
-
Regional distant sequence homology between amylases, α-glucosidases and transglucanosylases
-
COI: 1:CAS:528:DyaL1cXktVaqurY%3D, PID: 2450787
-
Svensson B (1988) Regional distant sequence homology between amylases, α-glucosidases and transglucanosylases. FEBS Lett 230:72–76. doi:10.1016/0014-5793(88)80644-6
-
(1988)
FEBS Lett
, vol.230
, pp. 72-76
-
-
Svensson, B.1
-
11
-
-
0023792288
-
Analysis of the Escherichia coli glycogen gene cluster suggests that catabolic enzymes are encoded among the biosynthetic genes
-
COI: 1:CAS:528:DyaL1MXksFWhu7g%3D, PID: 2975249
-
Romeo T, Kumar A, Preiss J (1988) Analysis of the Escherichia coli glycogen gene cluster suggests that catabolic enzymes are encoded among the biosynthetic genes. Gene 70:363–376. doi:10.1016/0378-1119(88)90208-9
-
(1988)
Gene
, vol.70
, pp. 363-376
-
-
Romeo, T.1
Kumar, A.2
Preiss, J.3
-
12
-
-
0026344059
-
Sequence conservation of the catalytic regions of anylolytic enzymes in maize branching enzyme-I
-
COI: 1:CAS:528:DyaK3sXhvVCntQ%3D%3D, PID: 1720313
-
Baba T, Kimura K, Mizuno K, Etoh H, Ishida Y, Shida O, Arai Y (1991) Sequence conservation of the catalytic regions of anylolytic enzymes in maize branching enzyme-I. Biochem Biophys Res Commun 181:87–94. doi:10.1016/S0006491X(05)81385-3
-
(1991)
Biochem Biophys Res Commun
, vol.181
, pp. 87-94
-
-
Baba, T.1
Kimura, K.2
Mizuno, K.3
Etoh, H.4
Ishida, Y.5
Shida, O.6
Arai, Y.7
-
13
-
-
0026764917
-
Action of neopullulanase. Neopullulanase catalyzes both hydrolysis and transglycosylation at α-(1->4)- and α-(1->6)-glucosidic linkages
-
COI: 1:CAS:528:DyaK38XlsVGqurs%3D, PID: 1388153
-
Takata H, Kuriki T, Okada S, Takesada Y, Iizuka M, Minamiura N, Imanaka T (1992) Action of neopullulanase. Neopullulanase catalyzes both hydrolysis and transglycosylation at α-(1->4)- and α-(1->6)-glucosidic linkages. J Biol Chem 267:18447–18452
-
(1992)
J Biol Chem
, vol.267
, pp. 18447-18452
-
-
Takata, H.1
Kuriki, T.2
Okada, S.3
Takesada, Y.4
Iizuka, M.5
Minamiura, N.6
Imanaka, T.7
-
14
-
-
0027991845
-
Properties and active center of the thermostable branching enzyme from Bacillus stearothermophilus
-
COI: 1:CAS:528:DyaK2MXmvVGntA%3D%3D, PID: 7944355
-
Takata H, Takaha T, Kuriki T, Okada S, Takagi M, Imanaka T (1994) Properties and active center of the thermostable branching enzyme from Bacillus stearothermophilus. Appl Environ Microbiol 60:3096–3104
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 3096-3104
-
-
Takata, H.1
Takaha, T.2
Kuriki, T.3
Okada, S.4
Takagi, M.5
Imanaka, T.6
-
15
-
-
0026055308
-
A classification of glycosyl hydrolases based on amino acid sequence similarities
-
COI: 1:CAS:528:DyaK3MXmslCmu78%3D, PID: 1747104
-
Henrissat B (1991) A classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J 280:309–316. doi:10.1042/bj2800309
-
(1991)
Biochem J
, vol.280
, pp. 309-316
-
-
Henrissat, B.1
-
16
-
-
33845665889
-
Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of α-amylase-related proteins
-
COI: 1:CAS:528:DC%2BD28Xht1Ohu7rJ, PID: 17085431
-
Stam MR, Danchin EG, Rancurel C, Coutinho PM, Henrissat B (2006) Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of α-amylase-related proteins. Protein Eng Des Sel 19:555–564. doi:10.1093/protein/gzl044
-
(2006)
Protein Eng Des Sel
, vol.19
, pp. 555-564
-
-
Stam, M.R.1
Danchin, E.G.2
Rancurel, C.3
Coutinho, P.M.4
Henrissat, B.5
-
17
-
-
0024289849
-
Cloning and nucleotide sequence of a heat-stable amylase gene from an anaerobic thermophile, Dictyoglomus thermophilum
-
COI: 1:CAS:528:DyaL1MXhvVSj, PID: 2453362
-
Fukusumi S, Kamizono A, Horinouchi S, Beppu T (1988) Cloning and nucleotide sequence of a heat-stable amylase gene from an anaerobic thermophile, Dictyoglomus thermophilum. Eur J Biochem 174:15–21. doi:10.1111/j.1432-1033.1988.tb14056.x
-
(1988)
Eur J Biochem
, vol.174
, pp. 15-21
-
-
Fukusumi, S.1
Kamizono, A.2
Horinouchi, S.3
Beppu, T.4
-
18
-
-
0027358798
-
α-amylase from the hyperthermophilic archaebacterium Pyrococcus furiosus. Cloning and sequencing of the gene and expression in Escherichia coli
-
COI: 1:CAS:528:DyaK3sXmtFyrsbo%3D, PID: 8226990
-
Laderman KA, Asada K, Uemori T, Mukai H, Taguchi Y, Kato I, Anfinsen CB (1993) α-amylase from the hyperthermophilic archaebacterium Pyrococcus furiosus. Cloning and sequencing of the gene and expression in Escherichia coli. J Biol Chem 268:24402–24407
-
(1993)
J Biol Chem
, vol.268
, pp. 24402-24407
-
-
Laderman, K.A.1
Asada, K.2
Uemori, T.3
Mukai, H.4
Taguchi, Y.5
Kato, I.6
Anfinsen, C.B.7
-
19
-
-
0027496724
-
The purification and characterization of an extremely thermostable α-amylase from the hyperthermophilic archaebacterium Pyrococcus furiosus
-
COI: 1:CAS:528:DyaK3sXlvFyhsbo%3D, PID: 8226989
-
Laderman KA, Davis BR, Krutzsch HC, Lewis MS, Griko YV, Privalov PL, Anfinsen CB (1993) The purification and characterization of an extremely thermostable α-amylase from the hyperthermophilic archaebacterium Pyrococcus furiosus. J Biol Chem 268:24394–24401
-
(1993)
J Biol Chem
, vol.268
, pp. 24394-24401
-
-
Laderman, K.A.1
Davis, B.R.2
Krutzsch, H.C.3
Lewis, M.S.4
Griko, Y.V.5
Privalov, P.L.6
Anfinsen, C.B.7
-
20
-
-
11144256486
-
Transglycosylation activity of Dictyoglomus thermophilum amylase A
-
COI: 1:CAS:528:DC%2BD2cXhtVKltr%2FL, PID: 15564678
-
Nakajima M, Imamura H, Shoun H, Horinouchi S, Wakagi T (2004) Transglycosylation activity of Dictyoglomus thermophilum amylase A. Biosci Biotechnol Biochem 68:2369–2373. doi:10.1271/bbb.68.2369
-
(2004)
Biosci Biotechnol Biochem
, vol.68
, pp. 2369-2373
-
-
Nakajima, M.1
Imamura, H.2
Shoun, H.3
Horinouchi, S.4
Wakagi, T.5
-
21
-
-
0029929874
-
Updating the sequence-based classification of glycosyl hydrolases
-
PID: 8687420
-
Henrissat B, Bairoch A (1996) Updating the sequence-based classification of glycosyl hydrolases. Biochem J 316:695–696. doi:10.1042/bj3160695
-
(1996)
Biochem J
, vol.316
, pp. 695-696
-
-
Henrissat, B.1
Bairoch, A.2
-
22
-
-
3242816124
-
Bioinformatics of the glycoside hydrolase family 57 and identification of catalytic residues in amylopullulanase from Thermococcus hydrothermalis
-
COI: 1:CAS:528:DC%2BD2cXmtVyrtLw%3D, PID: 15233783
-
Zona R, Chang-Pi-Hin F, O’Donohue MJ, Janeček S (2004) Bioinformatics of the glycoside hydrolase family 57 and identification of catalytic residues in amylopullulanase from Thermococcus hydrothermalis. Eur J Biochem 271:2863–2872. doi:10.1111/j.1432-1033.2004.04144.x
-
(2004)
Eur J Biochem
, vol.271
, pp. 2863-2872
-
-
Zona, R.1
Chang-Pi-Hin, F.2
O’Donohue, M.J.3
Janeček, S.4
-
23
-
-
33748668694
-
A novel branching enzyme of the GH-57 family in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1
-
COI: 1:CAS:528:DC%2BD28XosVehtb8%3D, PID: 16885460
-
Murakami T, Kanai T, Takata H, Kuriki T, Imanaka T (2006) A novel branching enzyme of the GH-57 family in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1. J Bacteriol 188:5915–5924. doi:10.1128/JB.00390-06
-
(2006)
J Bacteriol
, vol.188
, pp. 5915-5924
-
-
Murakami, T.1
Kanai, T.2
Takata, H.3
Kuriki, T.4
Imanaka, T.5
-
24
-
-
0034052144
-
Characterization and crystallization of an active N-terminally truncated form of the Escherichia coli glycogen branching enzyme
-
COI: 1:CAS:528:DC%2BD3cXjsF2ltr0%3D, PID: 10759837
-
Hilden I, Lo Leggio L, Larsen S, Poulsen P (2000) Characterization and crystallization of an active N-terminally truncated form of the Escherichia coli glycogen branching enzyme. Eur J Biochem 267:2150–2155. doi:10.1046/j.1432-1327.2000.01221.x
-
(2000)
Eur J Biochem
, vol.267
, pp. 2150-2155
-
-
Hilden, I.1
Lo Leggio, L.2
Larsen, S.3
Poulsen, P.4
-
25
-
-
0036830152
-
The X-ray crystallographic structure of Escherichia coli branching enzyme
-
COI: 1:CAS:528:DC%2BD38XotF2gtLY%3D, PID: 12196524
-
Abad MC, Binderup K, Rios-Steiner J, Arni RK, Preiss J, Geiger JH (2002) The X-ray crystallographic structure of Escherichia coli branching enzyme. J Biol Chem 277:42164–42170. doi:10.1074/jbc.M205746400
-
(2002)
J Biol Chem
, vol.277
, pp. 42164-42170
-
-
Abad, M.C.1
Binderup, K.2
Rios-Steiner, J.3
Arni, R.K.4
Preiss, J.5
Geiger, J.H.6
-
26
-
-
77954240010
-
Crystal structure of full-length Mycobacterium tuberculosis H37Rv glycogen branching enzyme: insights of N-terminal beta-sandwich in substrate specificity and enzymatic activity
-
COI: 1:CAS:528:DC%2BC3cXnvFSitbk%3D, PID: 20444687
-
Pal K, Kumar S, Sharma S, Garg SK, Alam MS, Xu HE, Agrawal P, Swaminathan K (2010) Crystal structure of full-length Mycobacterium tuberculosis H37Rv glycogen branching enzyme: insights of N-terminal beta-sandwich in substrate specificity and enzymatic activity. J Biol Chem 285:20897–20903. doi:10.1074/jbc.M110.121707
-
(2010)
J Biol Chem
, vol.285
, pp. 20897-20903
-
-
Pal, K.1
Kumar, S.2
Sharma, S.3
Garg, S.K.4
Alam, M.S.5
Xu, H.E.6
Agrawal, P.7
Swaminathan, K.8
-
27
-
-
57349180133
-
Domain evolution in the GH13 pullulanase subfamily with focus on the carbohydrate-binding module family 48
-
Machovič M, Janeček Š (2008) Domain evolution in the GH13 pullulanase subfamily with focus on the carbohydrate-binding module family 48. Biologia 63:1057–1068. doi:10.2478/s11756-008-0164-4
-
(2008)
Biologia
, vol.63
, pp. 1057-1068
-
-
Machovič, M.1
Janeček, Š.2
-
28
-
-
0035831255
-
Relationship of sequence and structure to specificity in the α-amylase family of enzymes
-
COI: 1:CAS:528:DC%2BD3MXhvVagtLk%3D, PID: 11257505
-
MacGregor EA, Janeček S, Svensson B (2001) Relationship of sequence and structure to specificity in the α-amylase family of enzymes. Biochim Biophys Acta 1546:1–20. doi:10.1016/S0167-4838(00)00302-2
-
(2001)
Biochim Biophys Acta
, vol.1546
, pp. 1-20
-
-
MacGregor, E.A.1
Janeček, S.2
Svensson, B.3
-
29
-
-
0028429952
-
Protein engineering in the alpha-amylase family: catalytic mechanism, substrate specificity, and stability
-
COI: 1:CAS:528:DyaK2cXltVamtbw%3D, PID: 8018865
-
Svensson B (1994) Protein engineering in the alpha-amylase family: catalytic mechanism, substrate specificity, and stability. Plant Mol Biol 25:141–157. doi:10.1007/BF00023233
-
(1994)
Plant Mol Biol
, vol.25
, pp. 141-157
-
-
Svensson, B.1
-
30
-
-
0030008619
-
Analysis of the active center of branching enzyme II from maize endosperm
-
COI: 1:CAS:528:DyaK28Xjs1Kns7c%3D, PID: 8804578
-
Kuriki T, Guan H, Sivak M, Preiss J (1996) Analysis of the active center of branching enzyme II from maize endosperm. J Protein Chem 15:305–313. doi:10.1007/BF01887119
-
(1996)
J Protein Chem
, vol.15
, pp. 305-313
-
-
Kuriki, T.1
Guan, H.2
Sivak, M.3
Preiss, J.4
-
31
-
-
0012286188
-
How many conserved sequence regions are there in the α-amylase family?
-
Janeček Š (2002) How many conserved sequence regions are there in the α-amylase family? Biol Bratisl 57:29–41
-
(2002)
Biol Bratisl
, vol.57
, pp. 29-41
-
-
Janeček, Š.1
-
32
-
-
84860839630
-
Sequence fingerprints of enzyme specificities from the glycoside hydrolase family GH57
-
PID: 22527043
-
Blesák K, Janeček S (2012) Sequence fingerprints of enzyme specificities from the glycoside hydrolase family GH57. Extremophiles 16:497–506. doi:10.1007/s00792-012-0449-9
-
(2012)
Extremophiles
, vol.16
, pp. 497-506
-
-
Blesák, K.1
Janeček, S.2
-
33
-
-
78650791313
-
Structural basis for branching-enzyme activity of glycoside hydrolase family 57: structure and stability studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1
-
COI: 1:CAS:528:DC%2BC3MXitVCit74%3D, PID: 21104698
-
Santos CR, Tonoli CC, Trindade DM, Betzel C, Takata H, Kuriki T, Kanai T, Imanaka T, Arni RK, Murakami MT (2011) Structural basis for branching-enzyme activity of glycoside hydrolase family 57: structure and stability studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1. Proteins 79:547–557. doi:10.1002/prot.22902
-
(2011)
Proteins
, vol.79
, pp. 547-557
-
-
Santos, C.R.1
Tonoli, C.C.2
Trindade, D.M.3
Betzel, C.4
Takata, H.5
Kuriki, T.6
Kanai, T.7
Imanaka, T.8
Arni, R.K.9
Murakami, M.T.10
-
34
-
-
0035443118
-
Glycoside hydrolases and glycosyltransferases: families and functional modules
-
COI: 1:CAS:528:DC%2BD3MXntlyisL0%3D, PID: 11785761
-
Bourne Y, Henrissat B (2001) Glycoside hydrolases and glycosyltransferases: families and functional modules. Curr Opin Struct Biol 11:593–600. doi:10.1016/S0959-440X(00)00253-0
-
(2001)
Curr Opin Struct Biol
, vol.11
, pp. 593-600
-
-
Bourne, Y.1
Henrissat, B.2
-
35
-
-
49449087287
-
Glycosyltransferases: structures, functions, and mechanisms
-
COI: 1:CAS:528:DC%2BD1cXos1ekurY%3D, PID: 18518825
-
Lairson LL, Henrissat B, Davies GJ, Withers SG (2008) Glycosyltransferases: structures, functions, and mechanisms. Annu Rev Biochem 77:521–555. doi:10.1146/annurev.biochem.76.061005.092322
-
(2008)
Annu Rev Biochem
, vol.77
, pp. 521-555
-
-
Lairson, L.L.1
Henrissat, B.2
Davies, G.J.3
Withers, S.G.4
-
36
-
-
4444373841
-
Crystal structure of glycogen synthase: homologous enzymes catalyze glycogen synthesis and degradation
-
COI: 1:CAS:528:DC%2BD2cXmslWht74%3D, PID: 15272305
-
Buschiazzo A, Ugalde JE, Guerin ME, Shepard W, Ugalde RA, Alzari PM (2004) Crystal structure of glycogen synthase: homologous enzymes catalyze glycogen synthesis and degradation. EMBO J 23:3196–3205. doi:10.1038/sj.emboj.7600324
-
(2004)
EMBO J
, vol.23
, pp. 3196-3205
-
-
Buschiazzo, A.1
Ugalde, J.E.2
Guerin, M.E.3
Shepard, W.4
Ugalde, R.A.5
Alzari, P.M.6
-
37
-
-
33646338642
-
Crystal structure of an archaeal glycogen synthase: insights into oligomerization and substrate binding of eukaryotic glycogen synthases
-
COI: 1:CAS:528:DC%2BD28XovVenug%3D%3D, PID: 16319074
-
Horcajada C, Guinovart JJ, Fita I, Ferrer JC (2006) Crystal structure of an archaeal glycogen synthase: insights into oligomerization and substrate binding of eukaryotic glycogen synthases. J Biol Chem 281:2923–2931. doi:10.1074/jbc.M507394200
-
(2006)
J Biol Chem
, vol.281
, pp. 2923-2931
-
-
Horcajada, C.1
Guinovart, J.J.2
Fita, I.3
Ferrer, J.C.4
-
38
-
-
84944096734
-
Crystal Structures of Escherichia coli branching enzyme bound to linear oligosaccharides
-
Feng L, Fawaz R, Hovde S, Gilbert L, Choi J, Geiger JH (2015) Crystal Structures of Escherichia coli branching enzyme bound to linear oligosaccharides. Biochemistry 54:6407–6418. doi:10.1021/acs.biochem.5b00228
-
(2015)
Biochemistry
, vol.54
, pp. 6407-6418
-
-
Feng, L.1
Fawaz, R.2
Hovde, S.3
Gilbert, L.4
Choi, J.5
Geiger, J.H.6
-
39
-
-
80054923047
-
Occurrence and functional significance of secondary carbohydrate binding sites in glycoside hydrolases
-
COI: 1:CAS:528:DC%2BC38XmsFOjur4%3D, PID: 21711082
-
Cuyvers S, Dornez E, Delcour JA, Courtin CM (2012) Occurrence and functional significance of secondary carbohydrate binding sites in glycoside hydrolases. Crit Rev Biotechnol 32:93–107. doi:10.3109/07388551.2011.561537
-
(2012)
Crit Rev Biotechnol
, vol.32
, pp. 93-107
-
-
Cuyvers, S.1
Dornez, E.2
Delcour, J.A.3
Courtin, C.M.4
-
40
-
-
84899860464
-
Analysis of surface binding sites (SBSs) in carbohydrate active enzymes with focus on glycoside hydrolase families 13 and 77—a mini-review
-
COI: 1:CAS:528:DC%2BC2cXnslWisLg%3D
-
Cockburn D, Wilkens C, Ruzanski C, Andersen S, Nielsen JW, Smith AM, Field RA, Willemoës M, Hachem MA, Svensson B (2014) Analysis of surface binding sites (SBSs) in carbohydrate active enzymes with focus on glycoside hydrolase families 13 and 77—a mini-review. Biologia 69:705–712. doi:10.2478/s11756-014-0373-9
-
(2014)
Biologia
, vol.69
, pp. 705-712
-
-
Cockburn, D.1
Wilkens, C.2
Ruzanski, C.3
Andersen, S.4
Nielsen, J.W.5
Smith, A.M.6
Field, R.A.7
Willemoës, M.8
Hachem, M.A.9
Svensson, B.10
-
41
-
-
79960223188
-
Crystal structure of the branching enzyme I (BEI) from Oryza sativa L with implications for catalysis and substrate binding
-
COI: 1:CAS:528:DC%2BC3MXoslOrtr0%3D, PID: 21493662
-
Noguchi J, Chaen K, Vu NT, Akasaka T, Shimada H, Nakashima T, Nishi A, Satoh H, Omori T, Kakuta Y, Kimura M (2011) Crystal structure of the branching enzyme I (BEI) from Oryza sativa L with implications for catalysis and substrate binding. Glycobiology 21:1108–1116. doi:10.1093/glycob/cwr049
-
(2011)
Glycobiology
, vol.21
, pp. 1108-1116
-
-
Noguchi, J.1
Chaen, K.2
Vu, N.T.3
Akasaka, T.4
Shimada, H.5
Nakashima, T.6
Nishi, A.7
Satoh, H.8
Omori, T.9
Kakuta, Y.10
Kimura, M.11
-
42
-
-
84864758794
-
Crystal structure of the rice branching enzyme I (BEI) in complex with maltopentaose
-
COI: 1:CAS:528:DC%2BC38XhtVOqu7vL, PID: 22771800
-
Chaen K, Noguchi J, Omori T, Kakuta Y, Kimura M (2012) Crystal structure of the rice branching enzyme I (BEI) in complex with maltopentaose. Biochem Biophys Res Commun 424:508–511. doi:10.1016/J.BBRC.2012.06.145
-
(2012)
Biochem Biophys Res Commun
, vol.424
, pp. 508-511
-
-
Chaen, K.1
Noguchi, J.2
Omori, T.3
Kakuta, Y.4
Kimura, M.5
-
43
-
-
84943763050
-
Structural basis of glycogen branching enzyme deficiency and pharmacologic rescue by rational peptide design
-
COI: 1:CAS:528:DC%2BC2MXitVelurvP, PID: 26199317
-
Froese DS, Michaeli A, McCorvie TJ, Krojer T, Sasi M, Melaev E, Goldblum A, Zatsepin M, Lossos A, Álvarez R, Escribá PV, Minassian BA, von Delft F, Kakhlon O, Yue WW (2015) Structural basis of glycogen branching enzyme deficiency and pharmacologic rescue by rational peptide design. Hum Mol Genet 24:5667–5676. doi:10.1093/hmg/ddv280
-
(2015)
Hum Mol Genet
, vol.24
, pp. 5667-5676
-
-
Froese, D.S.1
Michaeli, A.2
McCorvie, T.J.3
Krojer, T.4
Sasi, M.5
Melaev, E.6
Goldblum, A.7
Zatsepin, M.8
Lossos, A.9
Álvarez, R.10
Escribá, P.V.11
Minassian, B.A.12
von Delft, F.13
Kakhlon, O.14
Yue, W.W.15
-
44
-
-
84907815572
-
Characterization of starch branching enzymes from various sources
-
COI: 1:CAS:528:DC%2BC3sXpvVehs7k%3D
-
Sawada T, Nakagami T, Utsumi Y, Ohdan T, Suzuki E, Nakamura Y (2013) Characterization of starch branching enzymes from various sources. J Appl Glycosci 60:69–78. doi:10.5458/jag.jag.JAG-2012_011
-
(2013)
J Appl Glycosci
, vol.60
, pp. 69-78
-
-
Sawada, T.1
Nakagami, T.2
Utsumi, Y.3
Ohdan, T.4
Suzuki, E.5
Nakamura, Y.6
-
45
-
-
84907856033
-
Diversity of reaction characteristics of glucan branching enzymes and the fine structure of α-glucan from various sources
-
Sawada T, Nakamura Y, Ohdan T, Saitoh A, Francisco PB Jr, Suzuki E, Fujita N, Shimonaga T, Fujiwara S, Tsuzuki M, Colleoni C, Ball S (2014) Diversity of reaction characteristics of glucan branching enzymes and the fine structure of α-glucan from various sources. Arch Biochem Biophys 564:9–21. doi:10.1016/j.abb.2014.07.032
-
(2014)
Arch Biochem Biophys
, vol.564
, pp. 9-21
-
-
Sawada, T.1
Nakamura, Y.2
Ohdan, T.3
Saitoh, A.4
Francisco, P.B.5
Suzuki, E.6
Fujita, N.7
Shimonaga, T.8
Fujiwara, S.9
Tsuzuki, M.10
Colleoni, C.11
Ball, S.12
-
46
-
-
50549207068
-
Branching enzyme of Arthrobacter globiformis
-
COI: 1:CAS:528:DyaF2cXosVSqtw%3D%3D, PID: 14171890
-
Zevenhuizen LPTM (1964) Branching enzyme of Arthrobacter globiformis. Biochim Biophys Acta 81:608–611. doi:10.1016/0926-6569(64)90150-6
-
(1964)
Biochim Biophys Acta
, vol.81
, pp. 608-611
-
-
Zevenhuizen, L.P.T.M.1
-
47
-
-
0025786512
-
Characterization of the Butyrivibrio fibrisolvens glgB gene, which encodes a glycogen-branching enzyme with starch-clearing activity
-
COI: 1:CAS:528:DyaK3sXhslWhtQ%3D%3D, PID: 1938880
-
Rumbak E, Rawlings DE, Lindsey GG, Woods DR (1991) Characterization of the Butyrivibrio fibrisolvens glgB gene, which encodes a glycogen-branching enzyme with starch-clearing activity. J Bacteriol 173:6732–6741
-
(1991)
J Bacteriol
, vol.173
, pp. 6732-6741
-
-
Rumbak, E.1
Rawlings, D.E.2
Lindsey, G.G.3
Woods, D.R.4
-
48
-
-
61649113784
-
The unique branching patterns of Deinococcus glycogen branching enzymes are determined by their N-terminal domains
-
COI: 1:CAS:528:DC%2BD1MXjtVyqs7k%3D, PID: 19139240
-
Palomo M, Kralj S, van der Maarel MJ, Dijkhuizen L (2009) The unique branching patterns of Deinococcus glycogen branching enzymes are determined by their N-terminal domains. Appl Environ Microbiol 75:1355–1364. doi:10.1128/AEM.02141-08
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 1355-1364
-
-
Palomo, M.1
Kralj, S.2
van der Maarel, M.J.3
Dijkhuizen, L.4
-
49
-
-
33747093499
-
Heterologous expression and characterization of a novel branching enzyme from the thermoalkaliphilic anaerobic bacterium Anaerobranca gottschalkii
-
COI: 1:CAS:528:DC%2BD28XotVygtLc%3D, PID: 16408175
-
Thiemann V, Saake B, Vollstedt A, Schäfer T, Puls J, Bertoldo C, Freudl R, Antranikian G (2006) Heterologous expression and characterization of a novel branching enzyme from the thermoalkaliphilic anaerobic bacterium Anaerobranca gottschalkii. Appl Microbiol Biotechnol 72:60–71. doi:10.1007/s00253-005-0248-7
-
(2006)
Appl Microbiol Biotechnol
, vol.72
, pp. 60-71
-
-
Thiemann, V.1
Saake, B.2
Vollstedt, A.3
Schäfer, T.4
Puls, J.5
Bertoldo, C.6
Freudl, R.7
Antranikian, G.8
-
50
-
-
84933519304
-
Vibrio vulnificus glycogen branching enzyme preferentially transfers very short chains: N1 domain determines the chain length transferred
-
COI: 1:CAS:528:DC%2BC2MXlsVKktbk%3D, PID: 25819440
-
Jo HJ, Park S, Jeong HG, Kim JW, Park JT (2015) Vibrio vulnificus glycogen branching enzyme preferentially transfers very short chains: N1 domain determines the chain length transferred. FEBS Lett 589:1089–1094. doi:10.1016/j.febslet.2015.03.011
-
(2015)
FEBS Lett
, vol.589
, pp. 1089-1094
-
-
Jo, H.J.1
Park, S.2
Jeong, H.G.3
Kim, J.W.4
Park, J.T.5
-
51
-
-
43449136962
-
Biochemical characterisation of a glycogen branching enzyme from Streptococcus mutans: enzymatic modification of starch
-
COI: 1:CAS:528:DC%2BD1cXlvFKmur8%3D, PID: 26047289
-
Kim EJ, Ryu SI, Bae HA, Huong NT, Lee SB (2008) Biochemical characterisation of a glycogen branching enzyme from Streptococcus mutans: enzymatic modification of starch. Food Chem 110:979–984. doi:10.1016/j.foodchem.2008.03.025
-
(2008)
Food Chem
, vol.110
, pp. 979-984
-
-
Kim, E.J.1
Ryu, S.I.2
Bae, H.A.3
Huong, N.T.4
Lee, S.B.5
-
52
-
-
46749153941
-
Purification and characterization of branching specificity of a novel extracellular amylolytic enzyme from marine hyperthermophilic Rhodothermus marinus
-
COI: 1:CAS:528:DC%2BD1MXotVCht7Y%3D, PID: 18388462
-
Yoon SA, Ryu SI, Lee SB, Moon TW (2008) Purification and characterization of branching specificity of a novel extracellular amylolytic enzyme from marine hyperthermophilic Rhodothermus marinus. J Microbiol Biotechnol 18:457–464
-
(2008)
J Microbiol Biotechnol
, vol.18
, pp. 457-464
-
-
Yoon, S.A.1
Ryu, S.I.2
Lee, S.B.3
Moon, T.W.4
-
53
-
-
84868232077
-
Characterization of substrate and product specificity of the purified recombinant glycogen branching enzyme of Rhodothermus obamensis
-
COI: 1:CAS:528:DC%2BC38Xhsleitr3P, PID: 23041072
-
Roussel X, Lancelon-Pin C, Viksø-Nielsen A, Rolland-Sabaté A, Grimaud F, Potocki-Véronèse G, Buléon A, Putaux JL, D’Hulst C (2013) Characterization of substrate and product specificity of the purified recombinant glycogen branching enzyme of Rhodothermus obamensis. Biochim Biophys Acta 1830:2167–2177. doi:10.1016/j.bbagen.2012.09.022
-
(2013)
Biochim Biophys Acta
, vol.1830
, pp. 2167-2177
-
-
Roussel, X.1
Lancelon-Pin, C.2
Viksø-Nielsen, A.3
Rolland-Sabaté, A.4
Grimaud, F.5
Potocki-Véronèse, G.6
Buléon, A.7
Putaux, J.L.8
D’Hulst, C.9
-
54
-
-
84938820984
-
Crystallization and crystallographic analysis of branching enzymes from Cyanothece sp. ATCC 51142
-
COI: 1:CAS:528:DC%2BC2MXht12gs7nN, PID: 26249708
-
Hayashi M, Suzuki R, Colleoni C, Ball SG, Fujita N, Suzuki E (2015) Crystallization and crystallographic analysis of branching enzymes from Cyanothece sp. ATCC 51142. Acta Crystallogr F Struct Biol Commun 71:1109–1113. doi:10.1107/S2053230X1501198X
-
(2015)
Acta Crystallogr F Struct Biol Commun
, vol.71
, pp. 1109-1113
-
-
Hayashi, M.1
Suzuki, R.2
Colleoni, C.3
Ball, S.G.4
Fujita, N.5
Suzuki, E.6
-
55
-
-
0034657390
-
Limited proteolysis of branching enzyme from Escherichia coli
-
COI: 1:CAS:528:DC%2BD3cXjvFCkt7o%3D, PID: 10845715
-
Binderup K, Mikkelsen R, Preiss J (2000) Limited proteolysis of branching enzyme from Escherichia coli. Arch Biochem Biophys 377:366–371. doi:10.1006/abbi.2000.1815
-
(2000)
Arch Biochem Biophys
, vol.377
, pp. 366-371
-
-
Binderup, K.1
Mikkelsen, R.2
Preiss, J.3
-
56
-
-
84924386365
-
Functional characterization of three (GH13) branching enzymes involved in cyanobacterial starch biosynthesis from Cyanobacterium sp. NBRC 102756
-
COI: 1:CAS:528:DC%2BC2MXjslymtbw%3D, PID: 25731081
-
Suzuki R, Koide K, Hayashi M, Suzuki T, Sawada T, Ohdan T, Takahashi H, Nakamura Y, Fujita N, Suzuki E (2015) Functional characterization of three (GH13) branching enzymes involved in cyanobacterial starch biosynthesis from Cyanobacterium sp. NBRC 102756. Biochim Biophys Acta 1854:476–484. doi:10.1016/j.bbapap.2015.02.012
-
(2015)
Biochim Biophys Acta
, vol.1854
, pp. 476-484
-
-
Suzuki, R.1
Koide, K.2
Hayashi, M.3
Suzuki, T.4
Sawada, T.5
Ohdan, T.6
Takahashi, H.7
Nakamura, Y.8
Fujita, N.9
Suzuki, E.10
-
57
-
-
0346196461
-
Properties of branching enzyme from hyperthermophilic bacterium, Aquifex aeolicus, and its potential for production of highly-branched cyclic dextrin
-
COI: 1:CAS:528:DC%2BD3sXhs1eksLo%3D
-
Takata H, Ohdan K, Takaha T, Kuriki T, Okada S (2003) Properties of branching enzyme from hyperthermophilic bacterium, Aquifex aeolicus, and its potential for production of highly-branched cyclic dextrin. J Appl Glycosci 50:15–20. doi:10.5458/jag.50.15
-
(2003)
J Appl Glycosci
, vol.50
, pp. 15-20
-
-
Takata, H.1
Ohdan, K.2
Takaha, T.3
Kuriki, T.4
Okada, S.5
-
58
-
-
0347337768
-
Properties of the glucan branching enzyme of the hyperthermophilic bacterium Aquifex aeolicus
-
van der Maarel MJEC, Vos A, Sanders P, Dijkhuizen L (2003) Properties of the glucan branching enzyme of the hyperthermophilic bacterium Aquifex aeolicus. Biocatal Biotransform 21:199–207. doi:10.1080/10292920310001618528
-
(2003)
Biocatal Biotransform
, vol.21
, pp. 199-207
-
-
van der Maarel, M.J.E.C.1
Vos, A.2
Sanders, P.3
Dijkhuizen, L.4
-
59
-
-
77952391959
-
Characterization of the reactions of starch branching enzymes from rice endosperm
-
COI: 1:CAS:528:DC%2BC3cXmtFOgs7Y%3D, PID: 20305271
-
Nakamura Y, Utsumi Y, Sawada T, Aihara S, Utsumi C, Yoshida M, Kitamura S (2010) Characterization of the reactions of starch branching enzymes from rice endosperm. Plant Cell Physiol 51:776–794. doi:10.1093/pcp/pcq035
-
(2010)
Plant Cell Physiol
, vol.51
, pp. 776-794
-
-
Nakamura, Y.1
Utsumi, Y.2
Sawada, T.3
Aihara, S.4
Utsumi, C.5
Yoshida, M.6
Kitamura, S.7
-
60
-
-
84946221538
-
Molecular genetic analysis of glucan branching enzymes from plants and bacteria in Arabidopsis reveals marked differences in their functions and capacity to mediate starch granule formation
-
COI: 1:CAS:528:DC%2BC28XlvVGnu7c%3D, PID: 26358415
-
Lu KJ, Streb S, Meier F, Pfister B, Zeeman SC (2015) Molecular genetic analysis of glucan branching enzymes from plants and bacteria in Arabidopsis reveals marked differences in their functions and capacity to mediate starch granule formation. Plant Physiol 169:1638–1655. doi:10.1104/pp.15.00792
-
(2015)
Plant Physiol
, vol.169
, pp. 1638-1655
-
-
Lu, K.J.1
Streb, S.2
Meier, F.3
Pfister, B.4
Zeeman, S.C.5
-
61
-
-
0141567087
-
Characterization of the branching patterns of glycogen branching enzyme truncated on the N-terminus
-
COI: 1:CAS:528:DC%2BD3sXnt1ygsb0%3D, PID: 13679080
-
Devillers CH, Piper ME, Ballicora MA, Preiss J (2003) Characterization of the branching patterns of glycogen branching enzyme truncated on the N-terminus. Arch Biochem Biophys 418:34–38. doi:10.1016/S0003-9861(03)00341-2
-
(2003)
Arch Biochem Biophys
, vol.418
, pp. 34-38
-
-
Devillers, C.H.1
Piper, M.E.2
Ballicora, M.A.3
Preiss, J.4
-
62
-
-
0030613631
-
Construction of chimeric enzymes out of maize endosperm branching enzymes I and II: activity and properties
-
COI: 1:CAS:528:DyaK2sXnsVKktbY%3D, PID: 9360973
-
Kuriki T, Stewart DC, Preiss J (1997) Construction of chimeric enzymes out of maize endosperm branching enzymes I and II: activity and properties. J Biol Chem 272:28999–29004. doi:10.1074/jbc.272.4648999
-
(1997)
J Biol Chem
, vol.272
, pp. 28999-29004
-
-
Kuriki, T.1
Stewart, D.C.2
Preiss, J.3
-
63
-
-
80155132373
-
The glgB-encoded glycogen branching enzyme is essential for glycogen accumulation in Corynebacterium glutamicum
-
COI: 1:CAS:528:DC%2BC3MXhsFyqtL3L, PID: 21903753
-
Seibold GM, Breitinger KJ, Kempkes R, Both L, Krämer M, Dempf S, Eikmanns BJ (2011) The glgB-encoded glycogen branching enzyme is essential for glycogen accumulation in Corynebacterium glutamicum. Microbiology 157:3243–3251. doi:10.1099/mic.0.051565-0
-
(2011)
Microbiology
, vol.157
, pp. 3243-3251
-
-
Seibold, G.M.1
Breitinger, K.J.2
Kempkes, R.3
Both, L.4
Krämer, M.5
Dempf, S.6
Eikmanns, B.J.7
-
64
-
-
0028839801
-
Tissue-specific glycogen branching isoenzymes in a multicellular prokaryote, Streptomyces coelicolor A3(2)
-
COI: 1:CAS:528:DyaK2MXptlersLc%3D, PID: 8596463
-
Bruton CJ, Plaskitt KA, Chater KF (1995) Tissue-specific glycogen branching isoenzymes in a multicellular prokaryote, Streptomyces coelicolor A3(2). Mol Microbiol 18:89–99. doi:10.1111/j.1365-2958.1995.mmi_18010089.x
-
(1995)
Mol Microbiol
, vol.18
, pp. 89-99
-
-
Bruton, C.J.1
Plaskitt, K.A.2
Chater, K.F.3
-
65
-
-
15844416486
-
The interplay of glycogen metabolism and differentiation provides an insight into the developmental biology of Streptomyces coelicolor
-
PID: 15758231
-
Yeo M, Chater K (2005) The interplay of glycogen metabolism and differentiation provides an insight into the developmental biology of Streptomyces coelicolor. Microbiology 151:855–861. doi:10.1099/mic.0.27428-0
-
(2005)
Microbiology
, vol.151
, pp. 855-861
-
-
Yeo, M.1
Chater, K.2
-
66
-
-
53849108791
-
Capsular glucan and intracellular glycogen of Mycobacterium tuberculosis: biosynthesis and impact on the persistence in mice
-
Sambou T, Dinadayala P, Stadthagen G, Barilone N, Bordat Y, Constant P, Levillain F, Neyrolles O, Gicquel B, Lemassu A, Daffé M, Jackson M (2008) Capsular glucan and intracellular glycogen of Mycobacterium tuberculosis: biosynthesis and impact on the persistence in mice. Mol Microbiol 70:764–774. doi:10.1111/j.1365-2958.2008.06445.x
-
(2008)
Mol Microbiol
, vol.70
, pp. 764-774
-
-
Sambou, T.1
Dinadayala, P.2
Stadthagen, G.3
Barilone, N.4
Bordat, Y.5
Constant, P.6
Levillain, F.7
Neyrolles, O.8
Gicquel, B.9
Lemassu, A.10
Daffé, M.11
Jackson, M.12
-
67
-
-
77951296166
-
Self-poisoning of Mycobacterium tuberculosis by targeting GlgE in an α-glucan pathway
-
COI: 1:CAS:528:DC%2BC3cXjs1egsrs%3D, PID: 20305657
-
Kalscheuer R, Syson K, Veeraraghavan U, Weinrick B, Biermann KE, Liu Z, Sacchettini JC, Besra G, Bornemann S, Jacobs WR Jr (2010) Self-poisoning of Mycobacterium tuberculosis by targeting GlgE in an α-glucan pathway. Nat Chem Biol 6:376–384. doi:10.1038/nchembio.340
-
(2010)
Nat Chem Biol
, vol.6
, pp. 376-384
-
-
Kalscheuer, R.1
Syson, K.2
Veeraraghavan, U.3
Weinrick, B.4
Biermann, K.E.5
Liu, Z.6
Sacchettini, J.C.7
Besra, G.8
Bornemann, S.9
Jacobs, W.R.10
-
68
-
-
84890791014
-
Coupling dark metabolism to electricity generation using photosynthetic cocultures
-
COI: 1:CAS:528:DC%2BC3sXht1Kgtb7E, PID: 23893620
-
Badalamenti JP, Torres CI, Krajmalnik-Brown R (2014) Coupling dark metabolism to electricity generation using photosynthetic cocultures. Biotechnol Bioeng 111:223–231. doi:10.1002/bit.25011
-
(2014)
Biotechnol Bioeng
, vol.111
, pp. 223-231
-
-
Badalamenti, J.P.1
Torres, C.I.2
Krajmalnik-Brown, R.3
-
69
-
-
84938846977
-
Storage polysaccharide metabolism in Cyanobacteria
-
Tetlow IJ, (ed), The synthesis and breakdown of starch, 5, The Society for Experimental Biology, London
-
Colleoni C, Suzuki E (2012) Storage polysaccharide metabolism in Cyanobacteria. In: Tetlow IJ (ed) Essential reviews in experimental biology, vol 5., The synthesis and breakdown of starch. The Society for Experimental Biology, London, pp 217–253
-
(2012)
Essential reviews in experimental biology
, pp. 217-253
-
-
Colleoni, C.1
Suzuki, E.2
-
70
-
-
84875972010
-
Physicochemical variation of cyanobacterial starch, the insoluble α-glucans in cyanobacteria
-
COI: 1:CAS:528:DC%2BC3sXlsV2mtr8%3D, PID: 23299410
-
Suzuki E, Onoda M, Colleoni C, Ball S, Fujita N, Nakamura Y (2013) Physicochemical variation of cyanobacterial starch, the insoluble α-glucans in cyanobacteria. Plant Cell Physiol 54:465–473. doi:10.1093/pcp/pcs190
-
(2013)
Plant Cell Physiol
, vol.54
, pp. 465-473
-
-
Suzuki, E.1
Onoda, M.2
Colleoni, C.3
Ball, S.4
Fujita, N.5
Nakamura, Y.6
-
71
-
-
84907852614
-
Variation of storage polysaccharides in phototrophic microorganisms
-
Suzuki E, Suzuki R (2013) Variation of storage polysaccharides in phototrophic microorganisms. J Appl Glycosci 60:21–27. doi:10.5458/jag.jag.JAG-2012_016
-
(2013)
J Appl Glycosci
, vol.60
, pp. 21-27
-
-
Suzuki, E.1
Suzuki, R.2
-
72
-
-
12244271451
-
Three isoforms of isoamylase contribute different catalytic properties for the debranching of potato glucans
-
COI: 1:CAS:528:DC%2BD3sXmtFenuw%3D%3D, PID: 12509527
-
Hussain H, Mant A, Seale R, Zeeman S, Hinchliffe E, Edwards A, Hylton C, Bornemann S, Smith AM, Martin C, Bustos R (2003) Three isoforms of isoamylase contribute different catalytic properties for the debranching of potato glucans. Plant Cell 15:133–149. doi:10.1105/tpc.006635
-
(2003)
Plant Cell
, vol.15
, pp. 133-149
-
-
Hussain, H.1
Mant, A.2
Seale, R.3
Zeeman, S.4
Hinchliffe, E.5
Edwards, A.6
Hylton, C.7
Bornemann, S.8
Smith, A.M.9
Martin, C.10
Bustos, R.11
-
73
-
-
33644957243
-
Identification and characterization of a novel intracellular alkaline alpha-amylase from the hyperthermophilic bacterium Thermotoga maritima MSB8
-
Ballschmiter M, Fütterer O, Liebl W (2006) Identification and characterization of a novel intracellular alkaline alpha-amylase from the hyperthermophilic bacterium Thermotoga maritima MSB8. Appl Environ Microbiol 72:22064211. doi:10.1128/AEM.72.3.22064211.2006
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 22064211
-
-
Ballschmiter, M.1
Fütterer, O.2
Liebl, W.3
-
75
-
-
0032540874
-
Complete genome sequence of Treponema pallidum, the syphilis spirochete
-
COI: 1:CAS:528:DyaK1cXkslaguro%3D, PID: 9665876
-
Fraser CM, Norris SJ, Weinstock GM, White O, Sutton GG, Dodson R, Gwinn M, Hickey EK, Clayton R, Ketchum KA, Sodergren E, Hardham JM, McLeod MP, Salzberg S, Peterson J, Khalak H, Richardson D, Howell JK, Chidambaram M, Utterback T, McDonald L, Artiach P, Bowman C, Cotton MD, Fujii C, Garland S, Hatch B, Horst K, Roberts K, Watthey L, Weidman J, Smith HO, Venter JC (1998) Complete genome sequence of Treponema pallidum, the syphilis spirochete. Science 281:375–388. doi:10.1126/science.281.5375.375
-
(1998)
Science
, vol.281
, pp. 375-388
-
-
Fraser, C.M.1
Norris, S.J.2
Weinstock, G.M.3
White, O.4
Sutton, G.G.5
Dodson, R.6
Gwinn, M.7
Hickey, E.K.8
Clayton, R.9
Ketchum, K.A.10
Sodergren, E.11
Hardham, J.M.12
McLeod, M.P.13
Salzberg, S.14
Peterson, J.15
Khalak, H.16
Richardson, D.17
Howell, J.K.18
Chidambaram, M.19
Utterback, T.20
McDonald, L.21
Artiach, P.22
Bowman, C.23
Cotton, M.D.24
Fujii, C.25
Garland, S.26
Hatch, B.27
Horst, K.28
Roberts, K.29
Watthey, L.30
Weidman, J.31
Smith, H.O.32
Venter, J.C.33
more..
-
76
-
-
0020463405
-
Glycogen in thermoacidophilic archaebacteria of the genera Sulfolobus, Thermoproteus, Desulfurococcus and Thermococcus
-
König H, Skorko R, Zillig W, Reiter WD (1982) Glycogen in thermoacidophilic archaebacteria of the genera Sulfolobus, Thermoproteus, Desulfurococcus and Thermococcus. Arch Microbiol 132:297–303
-
(1982)
Arch Microbiol
, vol.132
, pp. 297-303
-
-
König, H.1
Skorko, R.2
Zillig, W.3
Reiter, W.D.4
-
78
-
-
0035917446
-
Metabolite and enzyme profiles of glycogen metabolism in Methanococcoides methylutens
-
COI: 1:CAS:528:DC%2BD3MXivFehs7w%3D, PID: 11325549
-
Maitra PK, Bhosale SB, Kshirsagar DC, Yeole TY, Shanbhag AN (2001) Metabolite and enzyme profiles of glycogen metabolism in Methanococcoides methylutens. FEMS Microbiol Lett 198:23–29. doi:10.1111/j.1574-6968.2001.tb10614.x
-
(2001)
FEMS Microbiol Lett
, vol.198
, pp. 23-29
-
-
Maitra, P.K.1
Bhosale, S.B.2
Kshirsagar, D.C.3
Yeole, T.Y.4
Shanbhag, A.N.5
-
79
-
-
0030843984
-
A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities
-
COI: 1:CAS:528:DyaK2sXmsVKju7c%3D, PID: 9334165
-
Campbell JA, Davies GJ, Bulone V, Henrissat B (1997) A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities. Biochem J 326:929–939. doi:10.1042/bj3260929u
-
(1997)
Biochem J
, vol.326
, pp. 929-939
-
-
Campbell, J.A.1
Davies, G.J.2
Bulone, V.3
Henrissat, B.4
-
80
-
-
0038487321
-
Genetic dissection of trehalose biosynthesis in Corynebacterium glutamicum: inactivation of trehalose production leads to impaired growth and an altered cell wall lipid composition
-
COI: 1:CAS:528:DC%2BD3sXlvVCjt7k%3D, PID: 12855718
-
Tzvetkov M, Klopprogge C, Zelder O, Liebl W (2003) Genetic dissection of trehalose biosynthesis in Corynebacterium glutamicum: inactivation of trehalose production leads to impaired growth and an altered cell wall lipid composition. Microbiology 149:1659–1673. doi:10.1099/mic.0.26405-0
-
(2003)
Microbiology
, vol.149
, pp. 1659-1673
-
-
Tzvetkov, M.1
Klopprogge, C.2
Zelder, O.3
Liebl, W.4
-
81
-
-
84857985644
-
Characterization of recombinant UDP- and ADP-glucose pyrophosphorylases and glycogen synthase to elucidate glucose-1-phosphate partitioning into oligo- and polysaccharides in Streptomyces coelicolor
-
PID: 22210767
-
Asención Diez MD, Peirú S, Demonte AM, Gramajo H, Iglesias AA (2012) Characterization of recombinant UDP- and ADP-glucose pyrophosphorylases and glycogen synthase to elucidate glucose-1-phosphate partitioning into oligo- and polysaccharides in Streptomyces coelicolor. J Bacteriol 194:1485–1493. doi:10.1128/JB.06377-11
-
(2012)
J Bacteriol
, vol.194
, pp. 1485-1493
-
-
Asención Diez, M.D.1
Peirú, S.2
Demonte, A.M.3
Gramajo, H.4
Iglesias, A.A.5
-
82
-
-
84928694825
-
Allosteric regulation of the partitioning of glucose-1-phosphate between glycogen and trehalose biosynthesis in Mycobacterium tuberculosis
-
PID: 25277548
-
Asención Diez MD, Demonte AM, Syson K, Arias DG, Gorelik A, Guerrero SA, Bornemann S, Iglesias AA (2015) Allosteric regulation of the partitioning of glucose-1-phosphate between glycogen and trehalose biosynthesis in Mycobacterium tuberculosis. Biochim Biophys Acta 1850:13–21. doi:10.1016/j.bbagen.2014.09.023
-
(2015)
Biochim Biophys Acta
, vol.1850
, pp. 13-21
-
-
Asención Diez, M.D.1
Demonte, A.M.2
Syson, K.3
Arias, D.G.4
Gorelik, A.5
Guerrero, S.A.6
Bornemann, S.7
Iglesias, A.A.8
-
83
-
-
59049095911
-
Polymethylated polysaccharides from Mycobacterium species revisited
-
COI: 1:CAS:528:DC%2BD1MXlvFalug%3D%3D, PID: 18786916
-
Jackson M, Brennan PJ (2009) Polymethylated polysaccharides from Mycobacterium species revisited. J Biol Chem 284:1949–1953. doi:10.1074/jbc.R800047200
-
(2009)
J Biol Chem
, vol.284
, pp. 1949-1953
-
-
Jackson, M.1
Brennan, P.J.2
-
84
-
-
84863933998
-
Biosynthesis of mycobacterial methylglucose lipopolysaccharides
-
COI: 1:CAS:528:DC%2BC38XpvFCnu74%3D, PID: 22678749
-
Mendes V, Maranha A, Alarico S, Empadinhas N (2012) Biosynthesis of mycobacterial methylglucose lipopolysaccharides. Nat Prod Rep 29:834–844. doi:10.1039/C2NP20014G
-
(2012)
Nat Prod Rep
, vol.29
, pp. 834-844
-
-
Mendes, V.1
Maranha, A.2
Alarico, S.3
Empadinhas, N.4
-
85
-
-
84940705326
-
Octanoylation of early intermediates of mycobacterial methylglucose lipopolysaccharides
-
PID: 26324178
-
Maranha A, Moynihan PJ, Miranda V, Lourenço EC, Nunes-Costa D, Fraga JS, Pereira PJB, Macedo-Ribeiro S, Ventura MR, Clarke AJ, Empadinhas N (2015) Octanoylation of early intermediates of mycobacterial methylglucose lipopolysaccharides. Sci Rep 5:13610. doi:10.1038/srep13610
-
(2015)
Sci Rep
, vol.5
, pp. 13610
-
-
Maranha, A.1
Moynihan, P.J.2
Miranda, V.3
Lourenço, E.C.4
Nunes-Costa, D.5
Fraga, J.S.6
Pereira, P.J.B.7
Macedo-Ribeiro, S.8
Ventura, M.R.9
Clarke, A.J.10
Empadinhas, N.11
-
86
-
-
34848875474
-
Genetic basis for the biosynthesis of methylglucose lipopolysaccharides in Mycobacterium tuberculosis
-
COI: 1:CAS:528:DC%2BD2sXhtVWjsLfL, PID: 17640872
-
Stadthagen G, Sambou T, Guerin M, Barilone N, Boudou F, Korduláková J, Charles P, Alzari PM, Lemassu A, Daffé M, Puzo G, Gicquel B, Rivière M, Jackson M (2007) Genetic basis for the biosynthesis of methylglucose lipopolysaccharides in Mycobacterium tuberculosis. J Biol Chem 282:27270–27276. doi:10.1074/jbc.M702676400
-
(2007)
J Biol Chem
, vol.282
, pp. 27270-27276
-
-
Stadthagen, G.1
Sambou, T.2
Guerin, M.3
Barilone, N.4
Boudou, F.5
Korduláková, J.6
Charles, P.7
Alzari, P.M.8
Lemassu, A.9
Daffé, M.10
Puzo, G.11
Gicquel, B.12
Rivière, M.13
Jackson, M.14
-
87
-
-
77951245174
-
Last step in the conversion of trehalose to glycogen. A mycobacterial enzyme that transfers maltose from maltose 1-phosphate to glycogen
-
COI: 1:CAS:528:DC%2BC3cXjsFehtLY%3D, PID: 20118231
-
Elbein AD, Pastuszak I, Tackett AJ, Wilson T, Pan YT (2010) Last step in the conversion of trehalose to glycogen. A mycobacterial enzyme that transfers maltose from maltose 1-phosphate to glycogen. J Biol Chem 285:9803–9812. doi:10.1074/jbc.M109.033944
-
(2010)
J Biol Chem
, vol.285
, pp. 9803-9812
-
-
Elbein, A.D.1
Pastuszak, I.2
Tackett, A.J.3
Wilson, T.4
Pan, Y.T.5
-
88
-
-
79958171834
-
Unexpected and widespread connections between bacterial glycogen and trehalose metabolism
-
COI: 1:CAS:528:DC%2BC3MXosVSlsLs%3D, PID: 21474533
-
Chandra G, Chater KF, Bornemann S (2011) Unexpected and widespread connections between bacterial glycogen and trehalose metabolism. Microbiology 157:1565–1572. doi:10.1099/mic.0.044263-0
-
(2011)
Microbiology
, vol.157
, pp. 1565-1572
-
-
Chandra, G.1
Chater, K.F.2
Bornemann, S.3
-
90
-
-
0000122573
-
PHYLIP—Phylogeny inference package (version 3.2)
-
Felsenstein J (1989) PHYLIP—Phylogeny inference package (version 3.2). Cladistics 5:164–166. http://evolution.genetics.washington.edu/phylip.html
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
|