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Volumn 6, Issue , 2016, Pages

Divergent bufavirus harboured in megabats represents a new lineage of parvoviruses

Author keywords

[No Author keywords available]

Indexed keywords

GENETIC RECOMBINATION; GENETIC VARIABILITY; HUMAN; INDONESIA; PHYLOGENY; POLYMERASE CHAIN REACTION; PROTOPARVOVIRUS; PTEROPUS; SCREENING; ANIMAL; BAT; CHEMISTRY; CLASSIFICATION; DNA SEQUENCE; GENETIC VARIATION; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; PARVOVIRIDAE; PARVOVIRUS INFECTION; PATHOLOGY; VETERINARY; VIROLOGY; VIRUS GENOME;

EID: 84964647489     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep24257     Document Type: Article
Times cited : (22)

References (38)
  • 1
    • 84867518658 scopus 로고    scopus 로고
    • Acute diarrhea in West African children: Diverse enteric viruses and a novel parvovirus genus
    • Phan, T. G. et al. Acute diarrhea in West African children: diverse enteric viruses and a novel parvovirus genus. J Virol 86, 11024-11030, doi: 10.1128/JVI.01427-12 (2012).
    • (2012) J Virol , vol.86 , pp. 11024-11030
    • Phan, T.G.1
  • 2
    • 84900992941 scopus 로고    scopus 로고
    • Novel human bufavirus genotype 3 in children with severe diarrhea, Bhutan
    • Yahiro, T. et al. Novel human bufavirus genotype 3 in children with severe diarrhea, bhutan. Emerg Infect Dis 20, 1037-1039, doi: 10.3201/eid2006.131430 (2014).
    • (2014) Emerg Infect Dis , vol.20 , pp. 1037-1039
    • Yahiro, T.1
  • 3
    • 84902777349 scopus 로고    scopus 로고
    • New viruses in idiopathic human diarrhea cases, the Netherlands
    • Smits, S. L. et al. New viruses in idiopathic human diarrhea cases, the Netherlands. Emerg Infect Dis 20, 1218-1222, doi: 10.3201/ eid2007.140190 (2014).
    • (2014) Emerg Infect Dis , vol.20 , pp. 1218-1222
    • Smits, S.L.1
  • 4
    • 84901054126 scopus 로고    scopus 로고
    • Bufavirus in feces of patients with gastroenteritis
    • Väisänen, E. et al. Bufavirus in feces of patients with gastroenteritis, Finland. Emerg Infect Dis 20, 1078-1080, doi: 10.3201/ eid2006.131674 (2014).
    • (2014) Finland. Emerg Infect Dis , vol.20 , pp. 1078-1080
    • Väisänen, E.1
  • 5
    • 84930871388 scopus 로고    scopus 로고
    • Bufavirus in fecal specimens of patients with and without diarrhea in Thailand
    • Chieochansin, T., Vutithanachot, V., Theamboonlers, A. & Poovorawan, Y. Bufavirus in fecal specimens of patients with and without diarrhea in Thailand. Arch Virol 160, 1781-1784, doi: 10.1007/s00705-015-2441-z (2015).
    • (2015) Arch Virol , vol.160 , pp. 1781-1784
    • Chieochansin, T.1    Vutithanachot, V.2    Theamboonlers, A.3    Poovorawan, Y.4
  • 6
    • 84942191969 scopus 로고    scopus 로고
    • Bufavirus genotype 3 in Turkish children with severe diarrhoea
    • Altay, A. et al. Bufavirus genotype 3 in Turkish children with severe diarrhoea. Clin Microbiol Infect 21, 961-964, doi: 10.1016/j. cmi.2015.06.006 (2015).
    • (2015) Clin Microbiol Infect , vol.21 , pp. 961-964
    • Altay, A.1
  • 7
    • 84939817899 scopus 로고    scopus 로고
    • Identification of Bufavirus-1 and Bufavirus-3 in Feces of Patients with Acute Diarrhea
    • Huang, D. D. et al. Identification of Bufavirus-1 and Bufavirus-3 in Feces of Patients with Acute Diarrhea, China. Sci Rep 5, 13272, doi: 10.1038/srep13272 (2015).
    • (2015) China. Sci Rep , vol.5
    • Huang, D.D.1
  • 8
    • 84899970268 scopus 로고    scopus 로고
    • The family Parvoviridae
    • Cotmore, S. F. et al. The family Parvoviridae. Arch Virol 159, 1239-1247, doi: 10.1007/s00705-013-1914-1 (2014).
    • (2014) Arch Virol , vol.159 , pp. 1239-1247
    • Cotmore, S.F.1
  • 9
    • 84931385434 scopus 로고    scopus 로고
    • Distinct Lineages of Bufavirus in Wild Shrews and Nonhuman Primates
    • Sasaki, M. et al. Distinct Lineages of Bufavirus in Wild Shrews and Nonhuman Primates. Emerg Infect Dis 21, 1230-1233, doi: 10.3201/eid2107.141969 (2015).
    • (2015) Emerg Infect Dis , vol.21 , pp. 1230-1233
    • Sasaki, M.1
  • 10
    • 84867521316 scopus 로고    scopus 로고
    • Pathogenic simian immunodeficiency virus infection is associated with expansion of the enteric virome
    • Handley, S. A. et al. Pathogenic simian immunodeficiency virus infection is associated with expansion of the enteric virome. Cell 151, 253-266, doi: 10.1016/j.cell.2012.09.024 (2012).
    • (2012) Cell , vol.151 , pp. 253-266
    • Handley, S.A.1
  • 11
    • 84957843590 scopus 로고    scopus 로고
    • Bufavirus Protoparvovirus in feces of wild rats in China
    • Yang, S. et al. Bufavirus Protoparvovirus in feces of wild rats in China. Virus Genes, doi: 10.1007/s11262-015-1262-1 (2015).
    • (2015) Virus Genes
    • Yang, S.1
  • 12
    • 84953232462 scopus 로고    scopus 로고
    • Detection and genetic characterization of a novel parvovirus distantly related to human bufavirus in domestic pigs
    • Hargitai, R. et al. Detection and genetic characterization of a novel parvovirus distantly related to human bufavirus in domestic pigs. Arch Virol, doi: 10.1007/s00705-015-2732-4 (2016).
    • (2016) Arch Virol
    • Hargitai, R.1
  • 13
    • 84937978345 scopus 로고    scopus 로고
    • Genetic diversity and recombination within bufaviruses: Detection of a novel strain in Hungarian bats
    • Kemenesi, G. et al. Genetic diversity and recombination within bufaviruses: Detection of a novel strain in Hungarian bats. Infect Genet Evol 33, 288-292, doi: 10.1016/j.meegid.2015.05.017 (2015).
    • (2015) Infect Genet Evol , vol.33 , pp. 288-292
    • Kemenesi, G.1
  • 14
    • 84939149641 scopus 로고    scopus 로고
    • Deciphering the bat virome catalog to better understand the ecological diversity of bat viruses and the bat origin of emerging infectious diseases
    • Wu, Z. et al. Deciphering the bat virome catalog to better understand the ecological diversity of bat viruses and the bat origin of emerging infectious diseases. ISME J, doi: 10.1038/ismej.2015.138 (2015).
    • (2015) ISME J
    • Wu, Z.1
  • 15
    • 0024981647 scopus 로고
    • Phylogenetic relations between microbats, megabats and primates (Mammalia: Chiroptera and Primates)
    • Pettigrew, J. D. et al. Phylogenetic relations between microbats, megabats and primates (Mammalia: Chiroptera and Primates). Philos Trans R Soc Lond B Biol Sci 325, 489-559 (1989).
    • (1989) Philos Trans R Soc Lond B Biol Sci , vol.325 , pp. 489-559
    • Pettigrew, J.D.1
  • 16
    • 84873492863 scopus 로고    scopus 로고
    • The placental mammal ancestor and the post-K-Pg radiation of placentals
    • O'Leary, M. A. et al. The placental mammal ancestor and the post-K-Pg radiation of placentals. Science 339, 662-667, doi: 10.1126/ science.1229237 (2013).
    • (2013) Science , vol.339 , pp. 662-667
    • O'Leary, M.A.1
  • 17
    • 84889090318 scopus 로고    scopus 로고
    • Phylogenomic analyses elucidate the evolutionary relationships of bats
    • Tsagkogeorga, G., Parker, J., Stupka, E., Cotton, J. A. & Rossiter, S. J. Phylogenomic analyses elucidate the evolutionary relationships of bats. Curr Biol 23, 2262-2267, doi: 10.1016/j.cub.2013.09.014 (2013).
    • (2013) Curr Biol , vol.23 , pp. 2262-2267
    • Tsagkogeorga, G.1    Parker, J.2    Stupka, E.3    Cotton, J.A.4    Rossiter, S.J.5
  • 18
    • 84930859659 scopus 로고    scopus 로고
    • Bats as reservoirs of severe emerging infectious diseases
    • Han, H. J. et al. Bats as reservoirs of severe emerging infectious diseases. Virus Res 205, 1-6, doi: 10.1016/j.virusres.2015.05.006 (2015).
    • (2015) Virus Res , vol.205 , pp. 1-6
    • Han, H.J.1
  • 19
    • 84874664523 scopus 로고    scopus 로고
    • Bats and their virome: An important source of emerging viruses capable of infecting humans
    • Smith, I. & Wang, L. F. Bats and their virome: an important source of emerging viruses capable of infecting humans. Curr Opin Virol 3, 84-91, doi: 10.1016/j.coviro.2012.11.006 (2013).
    • (2013) Curr Opin Virol , vol.3 , pp. 84-91
    • Smith, I.1    Wang, L.F.2
  • 20
    • 84877923951 scopus 로고    scopus 로고
    • Metagenomic study of the viruses of African straw-coloured fruit bats: Detection of a chiropteran poxvirus and isolation of a novel adenovirus
    • Baker, K. S. et al. Metagenomic study of the viruses of African straw-coloured fruit bats: detection of a chiropteran poxvirus and isolation of a novel adenovirus. Virology 441, 95-106, doi: 10.1016/j.virol.2013.03.014 (2013).
    • (2013) Virology , vol.441 , pp. 95-106
    • Baker, K.S.1
  • 21
    • 84867593535 scopus 로고    scopus 로고
    • Molecular detection of a novel paramyxovirus in fruit bats from Indonesia
    • Sasaki, M. et al. Molecular detection of a novel paramyxovirus in fruit bats from Indonesia. Virol J 9, 240, doi: 10.1186/1743-422X- 9-240 (2012).
    • (2012) Virol J , vol.9 , pp. 240
    • Sasaki, M.1
  • 22
    • 28044448698 scopus 로고    scopus 로고
    • Parvoviral virions deploy a capsid-tethered lipolytic enzyme to breach the endosomal membrane during cell entry
    • Farr, G. A., Zhang, L. G. & Tattersall, P. Parvoviral virions deploy a capsid-tethered lipolytic enzyme to breach the endosomal membrane during cell entry. Proc Natl Acad Sci USA 102, 17148-17153, doi: 10.1073/pnas.0508477102 (2005).
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 17148-17153
    • Farr, G.A.1    Zhang, L.G.2    Tattersall, P.3
  • 23
    • 84884222071 scopus 로고    scopus 로고
    • A slender tract of glycine residues is required for translocation of the VP2 protein N-terminal domain through the parvovirus MVM capsid channel to initiate infection
    • Castellanos, M. et al. A slender tract of glycine residues is required for translocation of the VP2 protein N-terminal domain through the parvovirus MVM capsid channel to initiate infection. Biochem J 455, 87-94, doi: 10.1042/BJ20130503 (2013).
    • (2013) Biochem J , vol.455 , pp. 87-94
    • Castellanos, M.1
  • 24
    • 79960425867 scopus 로고    scopus 로고
    • Why do RNA viruses recombine?
    • Simon-Loriere, E. & Holmes, E. C. Why do RNA viruses recombine? Nat Rev Microbiol 9, 617-626, doi: 10.1038/nrmicro2614 (2011).
    • (2011) Nat Rev Microbiol , vol.9 , pp. 617-626
    • Simon-Loriere, E.1    Holmes, E.C.2
  • 25
    • 80053361715 scopus 로고    scopus 로고
    • Recombination in Eukaryotic Single Stranded DNA Viruses
    • Martin, D. P. et al. Recombination in Eukaryotic Single Stranded DNA Viruses. Viruses-Basel 3, 1699-1738, doi: 10.3390/v3091699 (2011).
    • (2011) Viruses-Basel , vol.3 , pp. 1699-1738
    • Martin, D.P.1
  • 26
    • 36749025635 scopus 로고    scopus 로고
    • Comparative analysis reveals frequent recombination in the parvoviruses
    • Shackelton, L. A., Hoelzer, K., Parrish, C. R. & Holmes, E. C. Comparative analysis reveals frequent recombination in the parvoviruses. J Gen Virol 88, 3294-3301, doi: 10.1099/vir.0.83255-0 (2007).
    • (2007) J Gen Virol , vol.88 , pp. 3294-3301
    • Shackelton, L.A.1    Hoelzer, K.2    Parrish, C.R.3    Holmes, E.C.4
  • 27
    • 66549094360 scopus 로고    scopus 로고
    • Evidence for recombination between feline panleukopenia virus and canine parvovirus type 2
    • Ohshima, T. & Mochizuki, M. Evidence for recombination between feline panleukopenia virus and canine parvovirus type 2. J Vet Med Sci 71, 403-408 (2009).
    • (2009) J Vet Med Sci , vol.71 , pp. 403-408
    • Ohshima, T.1    Mochizuki, M.2
  • 28
    • 84867897405 scopus 로고    scopus 로고
    • Evidence for natural recombination between mink enteritis virus and canine parvovirus
    • Wang, J. et al. Evidence for natural recombination between mink enteritis virus and canine parvovirus. Virol J 9, 252, doi: 10.1186/1743-422X-9-252 (2012).
    • (2012) Virol J , vol.9 , pp. 252
    • Wang, J.1
  • 29
    • 84921994075 scopus 로고    scopus 로고
    • Isolation and characterization of a novel alphaherpesvirus in fruit bats
    • Sasaki, M. et al. Isolation and characterization of a novel alphaherpesvirus in fruit bats. J Virol 88, 9819-9829, doi: 10.1128/ JVI.01277-14 (2014).
    • (2014) J Virol , vol.88 , pp. 9819-9829
    • Sasaki, M.1
  • 30
    • 84925504912 scopus 로고    scopus 로고
    • Detection of coronavirus genomes in Moluccan naked-backed fruit bats in Indonesia
    • Anindita, P. D. et al. Detection of coronavirus genomes in Moluccan naked-backed fruit bats in Indonesia. Arch Virol 160, 1113-1118, doi: 10.1007/s00705-015-2342-1 (2015).
    • (2015) Arch Virol , vol.160 , pp. 1113-1118
    • Anindita, P.D.1
  • 31
    • 84925487962 scopus 로고    scopus 로고
    • Detection of novel polyomaviruses in fruit bats in Indonesia
    • Kobayashi, S. et al. Detection of novel polyomaviruses in fruit bats in Indonesia. Arch Virol 160, 1075-1082, doi: 10.1007/s00705- 015-2349-7 (2015).
    • (2015) Arch Virol , vol.160 , pp. 1075-1082
    • Kobayashi, S.1
  • 32
    • 27744434283 scopus 로고    scopus 로고
    • Improved rapid amplification of cDNA ends (RACE) for mapping both the 5' and 3' terminal sequences of paramyxovirus genomes
    • Li, Z., Yu, M., Zhang, H., Wang, H. Y. & Wang, L. F. Improved rapid amplification of cDNA ends (RACE) for mapping both the 5' and 3' terminal sequences of paramyxovirus genomes. J Virol Methods 130, 154-156, doi: 10.1016/j.jviromet.2005.06.022 (2005).
    • (2005) J Virol Methods , vol.130 , pp. 154-156
    • Li, Z.1    Yu, M.2    Zhang, H.3    Wang, H.Y.4    Wang, L.F.5
  • 33
    • 84875619226 scopus 로고    scopus 로고
    • MAFFT multiple sequence alignment software version 7: Improvements in performance and usability
    • Katoh, K. & Standley, D. M. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30, 772-780, doi: 10.1093/molbev/mst010 (2013).
    • (2013) Mol Biol Evol , vol.30 , pp. 772-780
    • Katoh, K.1    Standley, D.M.2
  • 34
    • 84860109324 scopus 로고    scopus 로고
    • MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space
    • Ronquist, F. et al. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61, 539-542, doi: 10.1093/sysbio/sys029 (2012).
    • (2012) Syst Biol , vol.61 , pp. 539-542
    • Ronquist, F.1
  • 35
    • 0032889281 scopus 로고    scopus 로고
    • Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination
    • Lole, K. S. et al. Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J Virol 73, 152-160 (1999).
    • (1999) J Virol , vol.73 , pp. 152-160
    • Lole, K.S.1
  • 36
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120 (1980).
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 37
    • 79951566251 scopus 로고    scopus 로고
    • Improving marginal likelihood estimation for Bayesian phylogenetic model selection
    • Xie, W., Lewis, P. O., Fan, Y., Kuo, L. & Chen, M. H. Improving marginal likelihood estimation for Bayesian phylogenetic model selection. Syst Biol 60, 150-160, doi: 10.1093/sysbio/syq085 (2011).
    • (2011) Syst Biol , vol.60 , pp. 150-160
    • Xie, W.1    Lewis, P.O.2    Fan, Y.3    Kuo, L.4    Chen, M.H.5


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