-
1
-
-
84859361768
-
Structural disorder in eukaryotes
-
Pancsa R, Tompa P, (2012) Structural disorder in eukaryotes. PLoS One 7: e34687.
-
(2012)
PLoS One
, vol.7
, pp. e34687
-
-
Pancsa, R.1
Tompa, P.2
-
2
-
-
84876524220
-
D2P2: Database of disordered protein predictions
-
Oates ME, Romero P, Ishida T, Ghalwash M, Mizianty MJ, Xue B, Dosztányi Z, Uversky VN, Obradovic Z, Kurgan L, Dunker AK, Gough J, (2013) D2P2: database of disordered protein predictions. Nucleic Acids Res 41: D508-D516.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D508-D516
-
-
Oates, M.E.1
Romero, P.2
Ishida, T.3
Ghalwash, M.4
Mizianty, M.J.5
Xue, B.6
Dosztányi, Z.7
Uversky, V.N.8
Obradovic, Z.9
Kurgan, L.10
Dunker, A.K.11
Gough, J.12
-
3
-
-
84925114160
-
Intrinsically disordered proteins in cellular signalling and regulation
-
Wright PE, Dyson HJ, (2015) Intrinsically disordered proteins in cellular signalling and regulation. Nat Rev Mol Cell Biol 16: 18-29.
-
(2015)
Nat Rev Mol Cell Biol
, vol.16
, pp. 18-29
-
-
Wright, P.E.1
Dyson, H.J.2
-
4
-
-
84862992463
-
Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks
-
Buljan M, Chalancon G, Eustermann S, Wagner GP, Fuxreiter M, Bateman A, Babu MM, (2012) Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks. Mol Cell 46: 871-883.
-
(2012)
Mol Cell
, vol.46
, pp. 871-883
-
-
Buljan, M.1
Chalancon, G.2
Eustermann, S.3
Wagner, G.P.4
Fuxreiter, M.5
Bateman, A.6
Babu, M.M.7
-
5
-
-
0035188314
-
Sequence complexity of disordered protein
-
Romero P, Obradovic Z, Li X, Garner EC, Brown CJ, Dunker AK, (2001) Sequence complexity of disordered protein. Proteins 42: 38-48.
-
(2001)
Proteins
, vol.42
, pp. 38-48
-
-
Romero, P.1
Obradovic, Z.2
Li, X.3
Garner, E.C.4
Brown, C.J.5
Dunker, A.K.6
-
6
-
-
52249124593
-
TOP-IDP-scale: A new amino acid scale measuring propensity for intrinsic disorder
-
Campen A, Williams RM, Brown CJ, Meng J, Uversky VN, Dunker AK, (2008) TOP-IDP-scale: a new amino acid scale measuring propensity for intrinsic disorder. Protein Pept Lett 15: 956-963.
-
(2008)
Protein Pept Lett
, vol.15
, pp. 956-963
-
-
Campen, A.1
Williams, R.M.2
Brown, C.J.3
Meng, J.4
Uversky, V.N.5
Dunker, A.K.6
-
7
-
-
38049061206
-
Alternative splicing: Current perspectives
-
Kim E, Goren A, Ast G, (2008) Alternative splicing: current perspectives. Bioessays 30: 38-47.
-
(2008)
Bioessays
, vol.30
, pp. 38-47
-
-
Kim, E.1
Goren, A.2
Ast, G.3
-
8
-
-
77951120000
-
Alternative splicing and evolution: Diversification, exon definition and function
-
Keren H, Lev-Maor G, Ast G, (2010) Alternative splicing and evolution: diversification, exon definition and function. Nat Rev Genet 11: 345-355.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 345-355
-
-
Keren, H.1
Lev-Maor, G.2
Ast, G.3
-
9
-
-
33744814686
-
Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms
-
Romero PR, Zaidi S, Fang YY, Uversky VN, Radivojac P, Oldfield CJ, Cortese MS, Sickmeier M, LeGall T, Obradovic Z, Dunker AK, (2006) Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms. Proc Natl Acad Sci USA 103: 8390-8395.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 8390-8395
-
-
Romero, P.R.1
Zaidi, S.2
Fang, Y.Y.3
Uversky, V.N.4
Radivojac, P.5
Oldfield, C.J.6
Cortese, M.S.7
Sickmeier, M.8
LeGall, T.9
Obradovic, Z.10
Dunker, A.K.11
-
10
-
-
84879143595
-
Alternative splicing of intrinsically disordered regions and rewiring of protein interactions
-
Buljan M, Chalancon G, Dunker AK, Bateman A, Balaji S, Fuxreiter M, Babu MM, (2013) Alternative splicing of intrinsically disordered regions and rewiring of protein interactions. Curr Opin Struct Biol 23: 443-450.
-
(2013)
Curr Opin Struct Biol
, vol.23
, pp. 443-450
-
-
Buljan, M.1
Chalancon, G.2
Dunker, A.K.3
Bateman, A.4
Balaji, S.5
Fuxreiter, M.6
Babu, M.M.7
-
11
-
-
84902446851
-
Classification of intrinsically disordered regions and proteins
-
van der Lee R, Buljan M, Lang B, Weatheritt RJ, Daughdrill GW, Dunker AK, Fuxreiter M, Gough J, Gsponer J, Jones DT, Kim PM, Kriwacki RW, Oldfield CJ, Pappu RV, Tompa P, Uversky VN, Wright PE, Babu MM, (2014) Classification of intrinsically disordered regions and proteins. Chem Rev 114: 6589-6631.
-
(2014)
Chem Rev
, vol.114
, pp. 6589-6631
-
-
Van Der Lee, R.1
Buljan, M.2
Lang, B.3
Weatheritt, R.J.4
Daughdrill, G.W.5
Dunker, A.K.6
Fuxreiter, M.7
Gough, J.8
Gsponer, J.9
Jones, D.T.10
Kim, P.M.11
Kriwacki, R.W.12
Oldfield, C.J.13
Pappu, R.V.14
Tompa, P.15
Uversky, V.N.16
Wright, P.E.17
Babu, M.M.18
-
12
-
-
77950421789
-
Dual coding in alternative reading frames correlates with intrinsic protein disorder
-
Kovacs E, Tompa P, Liliom K, Kalmar L, (2010) Dual coding in alternative reading frames correlates with intrinsic protein disorder. Proc Natl Acad Sci USA 107: 5429-5434.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 5429-5434
-
-
Kovacs, E.1
Tompa, P.2
Liliom, K.3
Kalmar, L.4
-
13
-
-
84931275197
-
Splice junctions are constrained by protein disorder
-
Smithers B, Oates ME, Gough J, (2015) Splice junctions are constrained by protein disorder. Nucleic Acids Res 43: 4814-4822.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. 4814-4822
-
-
Smithers, B.1
Oates, M.E.2
Gough, J.3
-
14
-
-
84877306983
-
Exon-phase symmetry and intrinsic structural disorder promote modular evolution in the human genome
-
Schad E, Kalmar L, Tompa P, (2013) Exon-phase symmetry and intrinsic structural disorder promote modular evolution in the human genome. Nucleic Acids Res 41: 4409-4422.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 4409-4422
-
-
Schad, E.1
Kalmar, L.2
Tompa, P.3
-
15
-
-
0029586334
-
Intron phase correlations and the evolution of the intron/exon structure of genes
-
Long M, Rosenberg C, Gilbert W, (1995) Intron phase correlations and the evolution of the intron/exon structure of genes. Proc Natl Acad Sci USA 92: 12495-12499.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 12495-12499
-
-
Long, M.1
Rosenberg, C.2
Gilbert, W.3
-
16
-
-
0030963588
-
The collagen triple-helix structure
-
Brodsky B, Ramshaw JAM, (1997) The collagen triple-helix structure. Matrix Biol 15: 545-554.
-
(1997)
Matrix Biol
, vol.15
, pp. 545-554
-
-
Brodsky, B.1
Ramshaw, J.A.M.2
-
17
-
-
0003880161
-
-
6th ed. Garland Science, New York
-
Alberts B, Johnson A, Lewis J, Morgan D, Raff M, Roberts K, Walter P, (2015) Molecular biology of the cell, 6th ed. Garland Science, New York.
-
(2015)
Molecular Biology of the Cell
-
-
Alberts, B.1
Johnson, A.2
Lewis, J.3
Morgan, D.4
Raff, M.5
Roberts, K.6
Walter, P.7
-
20
-
-
80755175366
-
Intrinsic disorder of the extracellular matrix
-
Peysselon F, Xue B, Uversky VN, Ricard-Blum S, (2011) Intrinsic disorder of the extracellular matrix. Mol Biosyst 7: 3353.
-
(2011)
Mol Biosyst
, vol.7
, pp. 3353
-
-
Peysselon, F.1
Xue, B.2
Uversky, V.N.3
Ricard-Blum, S.4
-
21
-
-
84891783706
-
SCOP2 prototype: A new approach to protein structure mining
-
Andreeva A, Howorth D, Chothia C, Kulesha E, Murzin AG, (2014) SCOP2 prototype: a new approach to protein structure mining. Nucleic Acids Res 42: D310-D314.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D310-D314
-
-
Andreeva, A.1
Howorth, D.2
Chothia, C.3
Kulesha, E.4
Murzin, A.G.5
-
22
-
-
84878885712
-
What's in a name? Why these proteins are intrinsically disordered
-
Dunker AK, Babu MM, Barbar E, Blackledge M, Bondos SE, Dosztányi Z, Dyson HJ, Forman-Kay J, Fuxreiter M, Gsponer J, Han K-H, Jones DT, Longhi S, Metallo SJ, Nishikawa K, Nussinov R, Obradovic Z, Pappu RV, Rost B, Selenko P, Subramaniam V, Sussman JL, Tompa P, Uversky VN, (2013) What's in a name? Why these proteins are intrinsically disordered. Intrinsically Disord Prot 1: e24157.
-
(2013)
Intrinsically Disord Prot
, vol.1
, pp. e24157
-
-
Dunker, A.K.1
Babu, M.M.2
Barbar, E.3
Blackledge, M.4
Bondos, S.E.5
Dosztányi, Z.6
Dyson, H.J.7
Forman-Kay, J.8
Fuxreiter, M.9
Gsponer, J.10
Han, K.-H.11
Jones, D.T.12
Longhi, S.13
Metallo, S.J.14
Nishikawa, K.15
Nussinov, R.16
Obradovic, Z.17
Pappu, R.V.18
Rost, B.19
Selenko, P.20
Subramaniam, V.21
Sussman, J.L.22
Tompa, P.23
Uversky, V.N.24
more..
-
23
-
-
0034669882
-
Why are "natively unfolded" proteins unstructured under physiologic conditions?
-
Uversky VN, Gillespie JR, Fink AL, (2000) Why are "natively unfolded" proteins unstructured under physiologic conditions? Proteins 41: 415-427.
-
(2000)
Proteins
, vol.41
, pp. 415-427
-
-
Uversky, V.N.1
Gillespie, J.R.2
Fink, A.L.3
-
24
-
-
0025295786
-
Evolution of collagen IV genes from a 54-base pair exon: A role for introns in gene evolution
-
Butticè G, Kaytes P, D'Armiento J, Vogeli G, Kurkinen M, (1990) Evolution of collagen IV genes from a 54-base pair exon: a role for introns in gene evolution. J Mol E 30: 479-488.
-
(1990)
J Mol E
, vol.30
, pp. 479-488
-
-
Butticè, G.1
Kaytes, P.2
D'Armiento, J.3
Vogeli, G.4
Kurkinen, M.5
-
25
-
-
33846990531
-
Splicing and the evolution of proteins in mammals
-
Parmley JL, Urrutia AO, Potrzebowski L, Kaessmann H, Hurst LD, (2007) Splicing and the evolution of proteins in mammals. PLoS Biol 5: e14.
-
(2007)
PLoS Biol
, vol.5
, pp. e14
-
-
Parmley, J.L.1
Urrutia, A.O.2
Potrzebowski, L.3
Kaessmann, H.4
Hurst, L.D.5
-
26
-
-
84891782659
-
Pfam: The protein families database
-
Finn RD, Bateman A, Clements J, Coggill P, Eberhardt RY, Eddy SR, Heger A, Hetherington K, Holm L, Mistry J, Sonnhammer ELL, Tate J, Punta M, (2014) Pfam: the protein families database. Nucleic Acids Res 42: D222-D230.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D222-D230
-
-
Finn, R.D.1
Bateman, A.2
Clements, J.3
Coggill, P.4
Eberhardt, R.Y.5
Eddy, S.R.6
Heger, A.7
Hetherington, K.8
Holm, L.9
Mistry, J.10
Sonnhammer, E.L.L.11
Tate, J.12
Punta, M.13
-
27
-
-
0031743421
-
Profile hidden Markov models
-
Eddy SR, (1998) Profile hidden Markov models. Bioinformatics 14: 755-763.
-
(1998)
Bioinformatics
, vol.14
, pp. 755-763
-
-
Eddy, S.R.1
|