A long noncoding RNA associated with susceptibility to celiac disease

Science

Volumn 352, Issue 6281, 2016, Pages 91-95

  Castellanos Rubio, Ainara ^a   Fernandez Jimenez, Nora ^b   Kratchmarov, Radomir ^a   Luo, Xiaobing ^c   Bhagat, Govind ^c,d   Green, Peter H R ^d   Schneider, Robert ^e   Kiledjian, Megerditch ^c   Bilbao, Jose Ramon ^b   Ghosh, Sankar ^a  

^a College of Physicians ^*  (United States)

^b UNIVERSITY OF THE BASQUE COUNTRY UPV EHU   (Spain)

^c New York Presbyterian Columbia University Medical Center   (United States)

^d NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

^e RUTGERS UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CAPPED RNA; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; HISTONE DEACETYLASE 1; HISTONE DEACETYLASE 3; INTERLEUKIN 12; INTERLEUKIN 15; INTERLEUKIN 2 RECEPTOR ALPHA; INTERLEUKIN 6; LONG NONCODING RNA 13; LONG UNTRANSLATED RNA; MONOCYTE CHEMOTACTIC PROTEIN 5; MYELOID DIFFERENTIATION FACTOR 88; STAT1 PROTEIN; STAT3 PROTEIN; TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR 2; UNCLASSIFIED DRUG;

DIGESTIVE SYSTEM DISORDER; GENE EXPRESSION; GENETIC ANALYSIS; IDENTIFICATION METHOD; POLYMORPHISM; RNA;

ANIMAL CELL; ARTICLE; BONE MARROW DERIVED MACROPHAGE; CELIAC DISEASE; CELL NUCLEUS; CELLULAR DISTRIBUTION; CHROMOSOME 2; CONTROLLED STUDY; DISEASE PREDISPOSITION; ENZYME ACTIVE SITE; GENE EXPRESSION; GENE REPRESSION; GENETIC ASSOCIATION; GENETIC SUSCEPTIBILITY; HAPLOTYPE; HETEROZYGOSITY; HUMAN; HUMAN CELL; INTESTINE BIOPSY; LAMINA PROPRIA; MOUSE; NONHUMAN; POLYADENYLATION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN RNA BINDING; RNA SEQUENCE; SINGLE NUCLEOTIDE POLYMORPHISM; ANIMAL; DOWN REGULATION; GENE EXPRESSION REGULATION; GENETIC PREDISPOSITION; GENETICS; INFLAMMATION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PATHOLOGY;

ANIMALS; BASE SEQUENCE; CELIAC DISEASE; DOWN-REGULATION; GENE EXPRESSION REGULATION; GENETIC PREDISPOSITION TO DISEASE; HAPLOTYPES; HETEROGENEOUS-NUCLEAR RIBONUCLEOPROTEINS; HUMANS; INFLAMMATION; MICE; MOLECULAR SEQUENCE DATA; POLYMORPHISM, SINGLE NUCLEOTIDE; RNA, LONG NONCODING;

EID: 84963532866     PISSN: 00368075     EISSN: 10959203     Source Type: Journal    
DOI: 10.1126/science.aad0467     Document Type: Article

References (30)

1. T. Derrien et al., Genome Res. 22, 1775-1789 (2012).
2. L. A. Hindorff et al., Proc. Natl. Acad. Sci. U.S.A. 106, 9362-9367 (2009).
3. G. Jin et al., Carcinogenesis 32, 1655-1659 (2011).
4. N. Fernandez-Jimenez et al., Hum. Mol. Genet. 23, 1298-1310 (2014).
5. P. H. Green, C. Cellier, N. Engl. J. Med. 357, 1731-1743 (2007).
6. P. C. Dubois et al., Nat. Genet. 42, 295-302 (2010).
7. G. Trynka et al., Nat. Genet. 43, 1193-1201 (2011).
8. D. A. van Heelet al., Nat. Genet. 39, 827-829 (2007).
9. L. D. Ward, M. Kellis, Nucleic Acids Res. 40, D930-D934 (2012).
10. P. Carninci et al., Science 309, 1559-1563 (2005).
11. M. Skipper et al., Nature 518, 313 (2015).
12. F. Yang et al., Mol. Cell 49, 1083-1096 (2013).
13. M. N. Cabili et al., Genome Biol. 16, 20 (2015).
14. F. Wang et al., J. Mol. Diagn. 14, 22-29 (2012).
15. A. A. Salamov, T. Nishikawa, M. B. Swindells, Bioinformatics 14, 384-390 (1998).
16. M. Punta et al., Nucleic Acids Res. 40, D290-D301 (2012).
17. J. Ernst, Z. Bar-Joseph, BMC Bioinformatics 7, 191 (2006).
18. V. Abadie, V. Discepolo, B. Jabri, Semin. Immunopathol. 34, 551-566 (2012).
19. N. Periolo et al., Cytokine 67, 44-51 (2014).
20. S. Geisler, L. Lojek, A. M. Khalil, K. E. Baker, J. Coller, Mol. Cell 45, 279-291 (2012).
21. Y. Li, M. Song, M. Kiledjian, RNA 17, 419-428 (2011).
22. Y. Li, M. G. Song, M. Kiledjian, Mol. Cell. Biol. 28, 939-948 (2008).
23. S. Carpenter et al., Science 341, 789-792 (2013).
24. A. M. Khalil et al., Proc. Natl. Acad. Sci. U.S.A. 106, 11667-11672 (2009).
25. J. Engreitz, E. S. Lander, M. Guttman, Methods Mol. Biol. 1262, 183-197 (2015).
26. M. Huarte et al., Cell 142, 409-419 (2010).
27. N. Sadri, R. J. Schneider, J. Invest. Dermatol. 129, 657-670 (2009).
28. C. Lee et al., Cereb. Cortex 18, 2909-2919 (2008).
29. S. Mili, H. J. Shu, Y. Zhao, S. Piñol-Roma, Mol. Cell. Biol. 21, 7307-7319 (2001).
30. C. A. McHugh et al., Nature 521, 232-236 (2015).