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Volumn 218, Issue 21, 2015, Pages 3368-3373

Systems genomics analysis centered on epigenetic inheritance supports development of a unified theory of biology

Author keywords

DNA methylation; Gene expression and networks; Histone modification; MicroRNA

Indexed keywords

MICRORNA;

EID: 84962878106     PISSN: 00220949     EISSN: None     Source Type: Journal    
DOI: 10.1242/jeb.125922     Document Type: Article
Times cited : (12)

References (41)
  • 4
    • 84929949604 scopus 로고    scopus 로고
    • Epigenetic and transgenerational reprogramming of brain development
    • Bale, T. L. (2015). Epigenetic and transgenerational reprogramming of brain development. Nat. Rev. Neurosci. 16, 332-344.
    • (2015) Nat. Rev. Neurosci , vol.16 , pp. 332-344
    • Bale, T.L.1
  • 5
    • 84876802476 scopus 로고    scopus 로고
    • DNA: Celebrate the unknowns
    • Ball, P. (2013). DNA: celebrate the unknowns. Nature 496, 419-420.
    • (2013) Nature , vol.496 , pp. 419-420
    • Ball, P.1
  • 6
    • 84941951786 scopus 로고    scopus 로고
    • Extracellular vesicle-mediated delivery of molecular compounds into gametes and embryos: Learning from nature
    • Barkalina, N., Jones, C., Wood, M. J. A. and Coward, K. (2015). Extracellular vesicle-mediated delivery of molecular compounds into gametes and embryos: learning from nature. Hum. Reprod. Update 21, 627-639.
    • (2015) Hum. Reprod. Update , vol.21 , pp. 627-639
    • Barkalina, N.1    Jones, C.2    Wood, M.J.A.3    Coward, K.4
  • 7
    • 84886877868 scopus 로고    scopus 로고
    • Epididymosomes convey different repertoires of microRNAs throughout the bovine epididymis
    • Belleannée, C., Calvo, É., Caballero, J. and Sullivan, R. (2013). Epididymosomes convey different repertoires of microRNAs throughout the bovine epididymis. Biol. Reprod. 89, 30.
    • (2013) Biol. Reprod , vol.89 , pp. 30
    • Belleannée, C.1    Calvo, É.2    Caballero, J.3    Sullivan, R.4
  • 9
    • 84913540819 scopus 로고    scopus 로고
    • Hunting for Darwins gemmules and Lamarcks fluid: Transgenerational signaling and histone methylation
    • Choi, Y. and Mango, S. E. (2014). Hunting for Darwins gemmules and Lamarcks fluid: Transgenerational signaling and histone methylation. Biochim. Biophys. Acta 1839, 1440-1453.
    • (2014) Biochim. Biophys. Acta , vol.1839 , pp. 1440-1453
    • Choi, Y.1    Mango, S.E.2
  • 11
    • 79960218376 scopus 로고    scopus 로고
    • A unified approach to the evolutionary consequences of genetic and nongenetic inheritance
    • Day, T. and Bonduriansky, R. (2011). A unified approach to the evolutionary consequences of genetic and nongenetic inheritance. Am. Nat. 178, E18-E36.
    • (2011) Am. Nat , vol.178 , pp. E18-E36
    • Day, T.1    Bonduriansky, R.2
  • 12
    • 84922883570 scopus 로고    scopus 로고
    • Epigenetic mechanisms underlying learning and the inheritance of learned behaviors
    • Dias, B. G., Maddox, S. A., Klengel, T. and Ressler, K. J. (2015). Epigenetic mechanisms underlying learning and the inheritance of learned behaviors. Trends Neurosci. 38, 96-107.
    • (2015) Trends Neurosci , vol.38 , pp. 96-107
    • Dias, B.G.1    Maddox, S.A.2    Klengel, T.3    Ressler, K.J.4
  • 13
    • 84856202904 scopus 로고    scopus 로고
    • Epigenetic inheritance: What news for evolution?
    • Hunter, B., Hollister, J. D. and Bomblies, K. (2012). Epigenetic inheritance: what news for evolution? Curr. Biol. 22, R54-R56.
    • (2012) Curr Biol , vol.22 , pp. R54-R56
    • Hunter, B.1    Hollister, J.D.2    Bomblies, K.3
  • 15
    • 84943780149 scopus 로고    scopus 로고
    • The inheritance of acquired epigenetic variations
    • Jablonka, E. and Lamb, M. J. (2015). The inheritance of acquired epigenetic variations. Int. J. Epidemiol.
    • (2015) Int. J. Epidemiol
    • Jablonka, E.1    Lamb, M.J.2
  • 16
    • 84862991525 scopus 로고    scopus 로고
    • Short structured RNAs with low GC content are selectively lost during extraction from a small number of cells
    • Kim, Y.-K., Yeo, J., Kim, B., Ha, M. and Kim, V. N. (2012). Short structured RNAs with low GC content are selectively lost during extraction from a small number of cells. Mol. Cell 46, 893-895.
    • (2012) Mol. Cell , vol.46 , pp. 893-895
    • Kim, Y.-K.1    Yeo, J.2    Kim, B.3    Ha, M.4    Kim, V.N.5
  • 17
    • 84891818318 scopus 로고    scopus 로고
    • MiRBase: Annotating high confidence microRNAs using deep sequencing data
    • Kozomara, A. and Griffiths-Jones, S. (2014). miRBase: Annotating high confidence microRNAs using deep sequencing data. Nucleic Acids Res. 42, D68-D73.
    • (2014) Nucleic Acids Res , vol.42 , pp. D68-D73
    • Kozomara, A.1    Griffiths-Jones, S.2
  • 18
    • 77956278708 scopus 로고    scopus 로고
    • Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3 trailers
    • Liao, J.-Y., Ma, L.-M., Guo, Y.-H., Zhang, Y.-C., Zhou, H., Shao, P., Chen, Y.-Q. and Qu, L.-H. (2010). Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3 trailers. PLoS ONE 5, e10563.
    • (2011) PLoS ONE , vol.5 , pp. e10563
    • Liao, J.-Y.1    Ma, L.-M.2    Guo, Y.-H.3    Zhang, Y.-C.4    Zhou, H.5    Shao, P.6    Chen, Y.-Q.7    Qu, L.-H.8
  • 19
    • 84888012771 scopus 로고    scopus 로고
    • Interaction-based evolution: How natural selection and nonrandom mutation work together
    • Livnat, A. (2013). Interaction-based evolution: how natural selection and nonrandom mutation work together. Biol. Direct 8, 24.
    • (2013) Biol. Direct , vol.8 , pp. 24
    • Livnat, A.1
  • 21
    • 84867366649 scopus 로고    scopus 로고
    • Rocking the foundations of molecular genetics
    • Mattick, J. S. (2012). Rocking the foundations of molecular genetics. Proc. Natl. Acad. Sci. USA 109, 16400-16401.
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 16400-16401
    • Mattick, J.S.1
  • 23
    • 84924429089 scopus 로고    scopus 로고
    • The theory of RNA-mediated gene evolution
    • Morris, K. V. (2015). The theory of RNA-mediated gene evolution. Epigenetics 10, 1-5.
    • (2015) Epigenetics , vol.10 , pp. 1-5
    • Morris, K.V.1
  • 24
    • 84880699689 scopus 로고    scopus 로고
    • Physiology is rocking the foundations of evolutionary biology
    • Noble, D. (2013). Physiology is rocking the foundations of evolutionary biology. Exp. Physiol. 98, 1235-1243.
    • (2013) Exp. Physiol , vol.98 , pp. 1235-1243
    • Noble, D.1
  • 25
    • 84924264935 scopus 로고    scopus 로고
    • Evolution beyond neo-Darwinism: A new conceptual framework
    • Noble, D. (2015). Evolution beyond neo-Darwinism: A new conceptual framework. J. Exp. Biol. 218, 7-13.
    • (2015) J. Exp. Biol , vol.218 , pp. 7-13
    • Noble, D.1
  • 27
    • 77953469917 scopus 로고    scopus 로고
    • Epigenetics as a unifying principle in the aetiology of complex traits and diseases
    • Petronis, A. (2010). Epigenetics as a unifying principle in the aetiology of complex traits and diseases. Nature 465, 721-727.
    • (2011) Nature , vol.465 , pp. 721-727
    • Petronis, A.1
  • 28
    • 44349160230 scopus 로고    scopus 로고
    • Population epigenetics
    • Richards, E. J. (2008). Population epigenetics. Curr. Opin. Genet. Dev. 18, 221-226.
    • (2008) Curr. Opin. Genet. Dev , vol.18 , pp. 221-226
    • Richards, E.J.1
  • 29
    • 84900506575 scopus 로고    scopus 로고
    • A model for the generation and transmission of variations in evolution
    • Rivoire, O. and Leibler, S. (2014). A model for the generation and transmission of variations in evolution. Proc. Natl. Acad. Sci. USA 111, E1940-E1949.
    • (2014) Proc. Natl. Acad. Sci. USA , vol.111 , pp. E1940-E1949
    • Rivoire, O.1    Leibler, S.2
  • 30
    • 84921991439 scopus 로고    scopus 로고
    • Molecular characterization of exosomes and their microRNA cargo in human follicular fluid: Bioinformatic analysis reveals that exosomal microRNAs control pathways involved in follicular maturation
    • Santonocito, M., Vento, M., Guglielmino, M. R., Battaglia, R., Wahlgren, J., Ragusa, M., Barbagallo, D., Borz, P., Rizzari, S., Maugeri, M. et al. (2014). Molecular characterization of exosomes and their microRNA cargo in human follicular fluid: bioinformatic analysis reveals that exosomal microRNAs control pathways involved in follicular maturation. Fertil. Steril. 102, 1751-1761.e1.
    • (2014) Fertil. Steril , vol.102 , pp. 1751-1761e1
    • Santonocito, M.1    Vento, M.2    Guglielmino, M.R.3    Battaglia, R.4    Wahlgren, J.5    Ragusa, M.6    Barbagallo, D.7    Borz, P.8    Rizzari, S.9    Maugeri, M.10
  • 31
    • 84901838574 scopus 로고    scopus 로고
    • Bioinformatic analysis revealing association of exosomal mRNAs and proteins in epigenetic inheritance
    • Sharma, A. (2014). Bioinformatic analysis revealing association of exosomal mRNAs and proteins in epigenetic inheritance. J. Theor. Biol. 357, 143-149.
    • (2014) J. Theor. Biol , vol.357 , pp. 143-149
    • Sharma, A.1
  • 32
    • 84929049580 scopus 로고    scopus 로고
    • Transgenerational epigenetic inheritance requires a much deeper analysis
    • Sharma, A. (2015a). Transgenerational epigenetic inheritance requires a much deeper analysis. Trends Mol. Med. 21, 269-270.
    • (2015) Trends Mol. Med , vol.21 , pp. 269-270
    • Sharma, A.1
  • 33
    • 84928890204 scopus 로고    scopus 로고
    • Transgenerational epigenetic inheritance: Resolving uncertainty and evolving biology
    • Sharma, A. (2015b). Transgenerational epigenetic inheritance: resolving uncertainty and evolving biology. Biomol. Concepts 6, 87-103.
    • (2015) Biomol. Concepts , vol.6 , pp. 87-103
    • Sharma, A.1
  • 34
    • 84962816735 scopus 로고    scopus 로고
    • Transgenerational epigenetic inheritance: Emerging concepts and future prospects
    • Sharma, A. (2015c). Transgenerational epigenetic inheritance: emerging concepts and future prospects. J. Reprod. Health Med. 1, 60-63.
    • (2015) J. Reprod. Health Med , vol.1 , pp. 60-63
    • Sharma, A.1
  • 35
    • 84942309354 scopus 로고    scopus 로고
    • Environmental epigenetics and a unified theory of the molecular aspects of evolution: A Neo-Lamarckian concept that facilitates Neo-Darwinian evolution
    • Skinner, M. K. (2015). Environmental epigenetics and a unified theory of the molecular aspects of evolution: A Neo-Lamarckian concept that facilitates Neo-Darwinian evolution. Genome Biol. Evol. 7, 1296-1302.
    • (2015) Genome Biol. Evol , vol.7 , pp. 1296-1302
    • Skinner, M.K.1
  • 37
    • 84922890092 scopus 로고    scopus 로고
    • Nongenetic inheritance and transgenerational epigenetics
    • Szyf, M. (2015). Nongenetic inheritance and transgenerational epigenetics. Trends Mol. Med. 21, 134-144.
    • (2015) Trends Mol. Med , vol.21 , pp. 134-144
    • Szyf, M.1
  • 39
    • 34047116826 scopus 로고    scopus 로고
    • Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome
    • Weber, M., Hellmann, I., Stadler, M. B., Ramos, L., Pääbo, S. and Rebhan, M. and Schübeler, D. (2007). Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nat. Genet. 39, 457-466.
    • (2007) Nat. Genet , vol.39 , pp. 457-466
    • Weber, M.1    Hellmann, I.2    Stadler, M.B.3    Ramos, L.4    Pääbo, S.5    Rebhan, M.6    Schübeler, D.7
  • 40
    • 84906877044 scopus 로고    scopus 로고
    • PiRNAs: From biogenesis to function
    • Weick, E.-M. and Miska, E. A. (2014). piRNAs: from biogenesis to function. Development 141, 3458-3471.
    • (2014) Development , vol.141 , pp. 3458-3471
    • Weick, E.-M.1    Miska, E.A.2
  • 41
    • 84911489718 scopus 로고    scopus 로고
    • Cellular microRNAs up-regulate transcription via interaction with promoter TATA-box motifs
    • Zhang, Y., Fan, M., Zhang, X., Huang, F., Wu, K., Zhang, J., Liu, J., Huang, Z., Luo, H., Tao, L. et al. (2014). Cellular microRNAs up-regulate transcription via interaction with promoter TATA-box motifs. RNA 20, 1878-1889.
    • (2014) RNA , vol.20 , pp. 1878-1889
    • Zhang, Y.1    Fan, M.2    Zhang, X.3    Huang, F.4    Wu, K.5    Zhang, J.6    Liu, J.7    Huang, Z.8    Luo, H.9    Tao, L.10


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