-
1
-
-
58249088751
-
MicroRNAs: target recognition and regulatory functions
-
Bartel D.P. MicroRNAs: target recognition and regulatory functions. Cell 2009, 136:215-233.
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.P.1
-
2
-
-
0033522447
-
Joint action of two RNA degradation pathways controls the timing of maternal transcript elimination at the midblastula transition in Drosophila melanogaster
-
Bashirullah A., Halsell S.R., Cooperstock R.L., Kloc M., Karaiskakis A., Fisher W.W., Fu W., Hamilton J.K., Etkin L.D., Lipshitz H.D. Joint action of two RNA degradation pathways controls the timing of maternal transcript elimination at the midblastula transition in Drosophila melanogaster. EMBO J. 1999, 18:2610-2620.
-
(1999)
EMBO J.
, vol.18
, pp. 2610-2620
-
-
Bashirullah, A.1
Halsell, S.R.2
Cooperstock, R.L.3
Kloc, M.4
Karaiskakis, A.5
Fisher, W.W.6
Fu, W.7
Hamilton, J.K.8
Etkin, L.D.9
Lipshitz, H.D.10
-
3
-
-
84868094761
-
Architecture of the nuclease module of the yeast Ccr4-not complex: the Not1-Caf1-Ccr4 interaction
-
Basquin J., Roudko V.V., Rode M., Basquin C., Séraphin B., Conti E. Architecture of the nuclease module of the yeast Ccr4-not complex: the Not1-Caf1-Ccr4 interaction. Mol. Cell 2012, 48:207-218.
-
(2012)
Mol. Cell
, vol.48
, pp. 207-218
-
-
Basquin, J.1
Roudko, V.V.2
Rode, M.3
Basquin, C.4
Séraphin, B.5
Conti, E.6
-
4
-
-
84862778053
-
Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish
-
Bazzini A.A., Lee M.T., Giraldez A.J. Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish. Science 2012, 336:233-237.
-
(2012)
Science
, vol.336
, pp. 233-237
-
-
Bazzini, A.A.1
Lee, M.T.2
Giraldez, A.J.3
-
5
-
-
33947609704
-
A conserved role for cytoplasmic poly(A)-binding protein 1 (PABPC1) in nonsense-mediated mRNA decay
-
Behm-Ansmant I., Gatfield D., Rehwinkel J., Hilgers V., Izaurralde E. A conserved role for cytoplasmic poly(A)-binding protein 1 (PABPC1) in nonsense-mediated mRNA decay. EMBO J. 2007, 26:1591-1601.
-
(2007)
EMBO J.
, vol.26
, pp. 1591-1601
-
-
Behm-Ansmant, I.1
Gatfield, D.2
Rehwinkel, J.3
Hilgers, V.4
Izaurralde, E.5
-
6
-
-
15444368798
-
Conservation of the deadenylase activity of proteins of the Caf1 family in human
-
Bianchin C., Mauxion F., Sentis S., Séraphin B., Corbo L. Conservation of the deadenylase activity of proteins of the Caf1 family in human. RNA 2005, 11:487-494.
-
(2005)
RNA
, vol.11
, pp. 487-494
-
-
Bianchin, C.1
Mauxion, F.2
Sentis, S.3
Séraphin, B.4
Corbo, L.5
-
7
-
-
80053580757
-
GW182 proteins directly recruit cytoplasmic deadenylase complexes to miRNA targets
-
Braun J.E., Huntzinger E., Fauser M., Izaurralde E. GW182 proteins directly recruit cytoplasmic deadenylase complexes to miRNA targets. Mol. Cell 2011, 44:120-133.
-
(2011)
Mol. Cell
, vol.44
, pp. 120-133
-
-
Braun, J.E.1
Huntzinger, E.2
Fauser, M.3
Izaurralde, E.4
-
8
-
-
41449110693
-
Temporal reciprocity of miRNAs and their targets during the maternal-to-zygotic transition in Drosophila
-
Bushati N., Stark A., Brennecke J., Cohen S.M. Temporal reciprocity of miRNAs and their targets during the maternal-to-zygotic transition in Drosophila. Curr. Biol. 2008, 18:501-506.
-
(2008)
Curr. Biol.
, vol.18
, pp. 501-506
-
-
Bushati, N.1
Stark, A.2
Brennecke, J.3
Cohen, S.M.4
-
9
-
-
84937440655
-
Roles for synonymous codon usage in protein biogenesis
-
Chaney J.L., Clark P.L. Roles for synonymous codon usage in protein biogenesis. Annu. Rev. Biophys. 2015, 44:143-166.
-
(2015)
Annu. Rev. Biophys.
, vol.44
, pp. 143-166
-
-
Chaney, J.L.1
Clark, P.L.2
-
10
-
-
80555131046
-
MiRNA repression involves GW182-mediated recruitment of CCR4-NOT through conserved W-containing motifs
-
Chekulaeva M., Mathys H., Zipprich J.T., Attig J., Colic M., Parker R., Filipowicz W. miRNA repression involves GW182-mediated recruitment of CCR4-NOT through conserved W-containing motifs. Nat. Struct. Mol. Biol. 2011, 18:1218-1226.
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 1218-1226
-
-
Chekulaeva, M.1
Mathys, H.2
Zipprich, J.T.3
Attig, J.4
Colic, M.5
Parker, R.6
Filipowicz, W.7
-
11
-
-
84858442444
-
Mechanisms of deadenylation-dependent decay
-
Chen C.Y., Shyu A.B. Mechanisms of deadenylation-dependent decay. Wiley Interdiscip. Rev. RNA 2011, 2:167-183.
-
(2011)
Wiley Interdiscip. Rev. RNA
, vol.2
, pp. 167-183
-
-
Chen, C.Y.1
Shyu, A.B.2
-
12
-
-
22344449952
-
The developmental miRNA profiles of zebrafish as determined by small RNA cloning
-
Chen P.Y., Manninga H., Slanchev K., Chien M., Russo J.J., Ju J., Sheridan R., John B., Marks D.S., Gaidatzis D., et al. The developmental miRNA profiles of zebrafish as determined by small RNA cloning. Genes Dev. 2005, 19:1288-1293.
-
(2005)
Genes Dev.
, vol.19
, pp. 1288-1293
-
-
Chen, P.Y.1
Manninga, H.2
Slanchev, K.3
Chien, M.4
Russo, J.J.5
Ju, J.6
Sheridan, R.7
John, B.8
Marks, D.S.9
Gaidatzis, D.10
-
13
-
-
70350780068
-
Ago-TNRC6 triggers microRNA-mediated decay by promoting two deadenylation steps
-
Chen C.Y., Zheng D., Xia Z., Shyu A.B. Ago-TNRC6 triggers microRNA-mediated decay by promoting two deadenylation steps. Nat. Struct. Mol. Biol. 2009, 16:1160-1166.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 1160-1166
-
-
Chen, C.Y.1
Zheng, D.2
Xia, Z.3
Shyu, A.B.4
-
14
-
-
84155195139
-
The Ccr4-not complex
-
Collart M.A., Panasenko O.O. The Ccr4-not complex. Gene 2012, 492:42-53.
-
(2012)
Gene
, vol.492
, pp. 42-53
-
-
Collart, M.A.1
Panasenko, O.O.2
-
15
-
-
34249092299
-
Unmasking activation of the zygotic genome using chromosomal deletions in the Drosophila embryo
-
De Renzis S., Elemento O., Tavazoie S., Wieschaus E.F. Unmasking activation of the zygotic genome using chromosomal deletions in the Drosophila embryo. PLoS Biol. 2007, 5:e117.
-
(2007)
PLoS Biol.
, vol.5
, pp. e117
-
-
De Renzis, S.1
Elemento, O.2
Tavazoie, S.3
Wieschaus, E.F.4
-
16
-
-
84865658810
-
P-bodies and stress granules: possible roles in the control of translation and mRNA degradation
-
Decker C.J., Parker R. P-bodies and stress granules: possible roles in the control of translation and mRNA degradation. Cold Spring Harb. Perspect. Biol. 2012, 4:a012286.
-
(2012)
Cold Spring Harb. Perspect. Biol.
, vol.4
, pp. a012286
-
-
Decker, C.J.1
Parker, R.2
-
17
-
-
33846021292
-
Tissue-specific differences in human transfer RNA expression
-
Dittmar K.A., Goodenbour J.M., Pan T. Tissue-specific differences in human transfer RNA expression. PLoS Genet. 2006, 2:e221.
-
(2006)
PLoS Genet.
, vol.2
, pp. e221
-
-
Dittmar, K.A.1
Goodenbour, J.M.2
Pan, T.3
-
18
-
-
4644280499
-
Solving the riddle of codon usage preferences: a test for translational selection
-
dos Reis M., Savva R., Wernisch L. Solving the riddle of codon usage preferences: a test for translational selection. Nucleic Acids Res. 2004, 32:5036-5044.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 5036-5044
-
-
dos Reis, M.1
Savva, R.2
Wernisch, L.3
-
19
-
-
43249093760
-
Posttranscriptional gene regulation by spatial rearrangement of the 3' untranslated region
-
Eberle A.B., Stalder L., Mathys H., Orozco R.Z., Mühlemann O. Posttranscriptional gene regulation by spatial rearrangement of the 3' untranslated region. PLoS Biol. 2008, 6:e92.
-
(2008)
PLoS Biol.
, vol.6
, pp. e92
-
-
Eberle, A.B.1
Stalder, L.2
Mathys, H.3
Orozco, R.Z.4
Mühlemann, O.5
-
20
-
-
84879408529
-
Alternative cleavage and polyadenylation: extent, regulation and function
-
Elkon R., Ugalde A.P., Agami R. Alternative cleavage and polyadenylation: extent, regulation and function. Nat. Rev. Genet. 2013, 14:496-506.
-
(2013)
Nat. Rev. Genet.
, vol.14
, pp. 496-506
-
-
Elkon, R.1
Ugalde, A.P.2
Agami, R.3
-
21
-
-
80555150587
-
MiRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT
-
Fabian M.R., Cieplak M.K., Frank F., Morita M., Green J., Srikumar T., Nagar B., Yamamoto T., Raught B., Duchaine T.F., Sonenberg N. miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT. Nat. Struct. Mol. Biol. 2011, 18:1211-1217.
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 1211-1217
-
-
Fabian, M.R.1
Cieplak, M.K.2
Frank, F.3
Morita, M.4
Green, J.5
Srikumar, T.6
Nagar, B.7
Yamamoto, T.8
Raught, B.9
Duchaine, T.F.10
Sonenberg, N.11
-
22
-
-
84908078106
-
A dual program for translation regulation in cellular proliferation and differentiation
-
Gingold H., Tehler D., Christoffersen N.R., Nielsen M.M., Asmar F., Kooistra S.M., Christophersen N.S., Christensen L.L., Borre M., Sørensen K.D., et al. A dual program for translation regulation in cellular proliferation and differentiation. Cell 2014, 158:1281-1292.
-
(2014)
Cell
, vol.158
, pp. 1281-1292
-
-
Gingold, H.1
Tehler, D.2
Christoffersen, N.R.3
Nielsen, M.M.4
Asmar, F.5
Kooistra, S.M.6
Christophersen, N.S.7
Christensen, L.L.8
Borre, M.9
Sørensen, K.D.10
-
23
-
-
33645124258
-
Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs
-
Giraldez A.J., Mishima Y., Rihel J., Grocock R.J., Van Dongen S., Inoue K., Enright A.J., Schier A.F. Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs. Science 2006, 312:75-79.
-
(2006)
Science
, vol.312
, pp. 75-79
-
-
Giraldez, A.J.1
Mishima, Y.2
Rihel, J.3
Grocock, R.J.4
Van Dongen, S.5
Inoue, K.6
Enright, A.J.7
Schier, A.F.8
-
24
-
-
0347763875
-
Dynamics of global gene expression changes during mouse preimplantation development
-
Hamatani T., Carter M.G., Sharov A.A., Ko M.S. Dynamics of global gene expression changes during mouse preimplantation development. Dev. Cell 2004, 6:117-131.
-
(2004)
Dev. Cell
, vol.6
, pp. 117-131
-
-
Hamatani, T.1
Carter, M.G.2
Sharov, A.A.3
Ko, M.S.4
-
25
-
-
77958459763
-
Upf1 senses 3'UTR length to potentiate mRNA decay
-
Hogg J.R., Goff S.P. Upf1 senses 3'UTR length to potentiate mRNA decay. Cell 2010, 143:379-389.
-
(2010)
Cell
, vol.143
, pp. 379-389
-
-
Hogg, J.R.1
Goff, S.P.2
-
26
-
-
84915784944
-
Cytoplasmic polyadenylation element binding proteins in development, health, and disease
-
Ivshina M., Lasko P., Richter J.D. Cytoplasmic polyadenylation element binding proteins in development, health, and disease. Annu. Rev. Cell Dev. Biol. 2014, 30:393-415.
-
(2014)
Annu. Rev. Cell Dev. Biol.
, vol.30
, pp. 393-415
-
-
Ivshina, M.1
Lasko, P.2
Richter, J.D.3
-
27
-
-
84890703972
-
The role of disordered protein regions in the assembly of decapping complexes and RNP granules
-
Jonas S., Izaurralde E. The role of disordered protein regions in the assembly of decapping complexes and RNP granules. Genes Dev. 2013, 27:2628-2641.
-
(2013)
Genes Dev.
, vol.27
, pp. 2628-2641
-
-
Jonas, S.1
Izaurralde, E.2
-
28
-
-
84931572130
-
Towards a molecular understanding of microRNA-mediated gene silencing
-
Jonas S., Izaurralde E. Towards a molecular understanding of microRNA-mediated gene silencing. Nat. Rev. Genet. 2015, 16:421-433.
-
(2015)
Nat. Rev. Genet.
, vol.16
, pp. 421-433
-
-
Jonas, S.1
Izaurralde, E.2
-
29
-
-
0027386243
-
The zebrafish midblastula transition
-
Kane D.A., Kimmel C.B. The zebrafish midblastula transition. Development 1993, 119:447-456.
-
(1993)
Development
, vol.119
, pp. 447-456
-
-
Kane, D.A.1
Kimmel, C.B.2
-
30
-
-
84928385447
-
Protein folding. Translational tuning optimizes nascent protein folding in cells
-
Kim S.J., Yoon J.S., Shishido H., Yang Z., Rooney L.A., Barral J.M., Skach W.R. Protein folding. Translational tuning optimizes nascent protein folding in cells. Science 2015, 348:444-448.
-
(2015)
Science
, vol.348
, pp. 444-448
-
-
Kim, S.J.1
Yoon, J.S.2
Shishido, H.3
Yang, Z.4
Rooney, L.A.5
Barral, J.M.6
Skach, W.R.7
-
32
-
-
4243603367
-
A new G-tailing method for the determination of the poly(A) tail length applied to hepatitis A virus RNA
-
Kusov Y.Y., Shatirishvili G., Dzagurov G., Gauss-Müller V. A new G-tailing method for the determination of the poly(A) tail length applied to hepatitis A virus RNA. Nucleic Acids Res. 2001, 29:E57.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. E57
-
-
Kusov, Y.Y.1
Shatirishvili, G.2
Dzagurov, G.3
Gauss-Müller, V.4
-
33
-
-
84867186197
-
Dynamic landscape of tandem 3' UTRs during zebrafish development
-
Li Y., Sun Y., Fu Y., Li M., Huang G., Zhang C., Liang J., Huang S., Shen G., Yuan S., et al. Dynamic landscape of tandem 3' UTRs during zebrafish development. Genome Res. 2012, 22:1899-1906.
-
(2012)
Genome Res.
, vol.22
, pp. 1899-1906
-
-
Li, Y.1
Sun, Y.2
Fu, Y.3
Li, M.4
Huang, G.5
Zhang, C.6
Liang, J.7
Huang, S.8
Shen, G.9
Yuan, S.10
-
34
-
-
84894085209
-
Protecting the proteome: eukaryotic cotranslational quality control pathways
-
Lykke-Andersen J., Bennett E.J. Protecting the proteome: eukaryotic cotranslational quality control pathways. J. Cell Biol. 2014, 204:467-476.
-
(2014)
J. Cell Biol.
, vol.204
, pp. 467-476
-
-
Lykke-Andersen, J.1
Bennett, E.J.2
-
35
-
-
84925811356
-
Roles of mRNA fate modulators Dhh1 and Pat1 in TNRC6-dependent gene silencing recapitulated in yeast
-
Makino S., Mishima Y., Inoue K., Inada T. Roles of mRNA fate modulators Dhh1 and Pat1 in TNRC6-dependent gene silencing recapitulated in yeast. J. Biol. Chem. 2015, 290:8331-8347.
-
(2015)
J. Biol. Chem.
, vol.290
, pp. 8331-8347
-
-
Makino, S.1
Mishima, Y.2
Inoue, K.3
Inada, T.4
-
36
-
-
30544437719
-
Transcriptome analysis of zebrafish embryogenesis using microarrays
-
Mathavan S., Lee S.G., Mak A., Miller L.D., Murthy K.R., Govindarajan K.R., Tong Y., Wu Y.L., Lam S.H., Yang H., et al. Transcriptome analysis of zebrafish embryogenesis using microarrays. PLoS Genet. 2005, 1:260-276.
-
(2005)
PLoS Genet.
, vol.1
, pp. 260-276
-
-
Mathavan, S.1
Lee, S.G.2
Mak, A.3
Miller, L.D.4
Murthy, K.R.5
Govindarajan, K.R.6
Tong, Y.7
Wu, Y.L.8
Lam, S.H.9
Yang, H.10
-
37
-
-
68749113985
-
Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells
-
Mayr C., Bartel D.P. Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells. Cell 2009, 138:673-684.
-
(2009)
Cell
, vol.138
, pp. 673-684
-
-
Mayr, C.1
Bartel, D.P.2
-
38
-
-
33750619546
-
Differential regulation of germline mRNAs in soma and germ cells by zebrafish miR-430
-
Mishima Y., Giraldez A.J., Takeda Y., Fujiwara T., Sakamoto H., Schier A.F., Inoue K. Differential regulation of germline mRNAs in soma and germ cells by zebrafish miR-430. Curr. Biol. 2006, 16:2135-2142.
-
(2006)
Curr. Biol.
, vol.16
, pp. 2135-2142
-
-
Mishima, Y.1
Giraldez, A.J.2
Takeda, Y.3
Fujiwara, T.4
Sakamoto, H.5
Schier, A.F.6
Inoue, K.7
-
39
-
-
0032472377
-
EDEN and EDEN-BP, a cis element and an associated factor that mediate sequence-specific mRNA deadenylation in Xenopus embryos
-
Paillard L., Omilli F., Legagneux V., Bassez T., Maniey D., Osborne H.B. EDEN and EDEN-BP, a cis element and an associated factor that mediate sequence-specific mRNA deadenylation in Xenopus embryos. EMBO J. 1998, 17:278-287.
-
(1998)
EMBO J.
, vol.17
, pp. 278-287
-
-
Paillard, L.1
Omilli, F.2
Legagneux, V.3
Bassez, T.4
Maniey, D.5
Osborne, H.B.6
-
40
-
-
84873570699
-
Evolutionary conservation of codon optimality reveals hidden signatures of cotranslational folding
-
Pechmann S., Frydman J. Evolutionary conservation of codon optimality reveals hidden signatures of cotranslational folding. Nat. Struct. Mol. Biol. 2013, 20:237-243.
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, pp. 237-243
-
-
Pechmann, S.1
Frydman, J.2
-
41
-
-
84870622730
-
The structural basis for the interaction between the CAF1 nuclease and the NOT1 scaffold of the human CCR4-NOT deadenylase complex
-
Petit A.P., Wohlbold L., Bawankar P., Huntzinger E., Schmidt S., Izaurralde E., Weichenrieder O. The structural basis for the interaction between the CAF1 nuclease and the NOT1 scaffold of the human CCR4-NOT deadenylase complex. Nucleic Acids Res. 2012, 40:11058-11072.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 11058-11072
-
-
Petit, A.P.1
Wohlbold, L.2
Bawankar, P.3
Huntzinger, E.4
Schmidt, S.5
Izaurralde, E.6
Weichenrieder, O.7
-
42
-
-
84924567669
-
Codon optimality is a major determinant of mRNA stability
-
Presnyak V., Alhusaini N., Chen Y.H., Martin S., Morris N., Kline N., Olson S., Weinberg D., Baker K.E., Graveley B.R., Coller J. Codon optimality is a major determinant of mRNA stability. Cell 2015, 160:1111-1124.
-
(2015)
Cell
, vol.160
, pp. 1111-1124
-
-
Presnyak, V.1
Alhusaini, N.2
Chen, Y.H.3
Martin, S.4
Morris, N.5
Kline, N.6
Olson, S.7
Weinberg, D.8
Baker, K.E.9
Graveley, B.R.10
Coller, J.11
-
43
-
-
84943742690
-
Pausing on polyribosomes: make way for elongation in translational control
-
Richter J.D., Coller J. Pausing on polyribosomes: make way for elongation in translational control. Cell 2015, 163:292-300.
-
(2015)
Cell
, vol.163
, pp. 292-300
-
-
Richter, J.D.1
Coller, J.2
-
44
-
-
46249092601
-
Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites
-
Sandberg R., Neilson J.R., Sarma A., Sharp P.A., Burge C.B. Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites. Science 2008, 320:1643-1647.
-
(2008)
Science
, vol.320
, pp. 1643-1647
-
-
Sandberg, R.1
Neilson, J.R.2
Sarma, A.3
Sharp, P.A.4
Burge, C.B.5
-
45
-
-
79960928455
-
Not1 mediates recruitment of the deadenylase Caf1 to mRNAs targeted for degradation by tristetraprolin
-
Sandler H., Kreth J., Timmers H.T., Stoecklin G. Not1 mediates recruitment of the deadenylase Caf1 to mRNAs targeted for degradation by tristetraprolin. Nucleic Acids Res. 2011, 39:4373-4386.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 4373-4386
-
-
Sandler, H.1
Kreth, J.2
Timmers, H.T.3
Stoecklin, G.4
-
46
-
-
13944274507
-
Smaug recruits the CCR4/POP2/NOT deadenylase complex to trigger maternal transcript localization in the early Drosophila embryo
-
Semotok J.L., Cooperstock R.L., Pinder B.D., Vari H.K., Lipshitz H.D., Smibert C.A. Smaug recruits the CCR4/POP2/NOT deadenylase complex to trigger maternal transcript localization in the early Drosophila embryo. Curr. Biol. 2005, 15:284-294.
-
(2005)
Curr. Biol.
, vol.15
, pp. 284-294
-
-
Semotok, J.L.1
Cooperstock, R.L.2
Pinder, B.D.3
Vari, H.K.4
Lipshitz, H.D.5
Smibert, C.A.6
-
47
-
-
0023650543
-
The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications
-
Sharp P.M., Li W.H. The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res. 1987, 15:1281-1295.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 1281-1295
-
-
Sharp, P.M.1
Li, W.H.2
-
48
-
-
84929453434
-
The end of the message: multiple protein-RNA interactions define the mRNA polyadenylation site
-
Shi Y., Manley J.L. The end of the message: multiple protein-RNA interactions define the mRNA polyadenylation site. Genes Dev. 2015, 29:889-897.
-
(2015)
Genes Dev.
, vol.29
, pp. 889-897
-
-
Shi, Y.1
Manley, J.L.2
-
49
-
-
43249084802
-
A competition between stimulators and antagonists of Upf complex recruitment governs human nonsense-mediated mRNA decay
-
Singh G., Rebbapragada I., Lykke-Andersen J. A competition between stimulators and antagonists of Upf complex recruitment governs human nonsense-mediated mRNA decay. PLoS Biol. 2008, 6:e111.
-
(2008)
PLoS Biol.
, vol.6
, pp. e111
-
-
Singh, G.1
Rebbapragada, I.2
Lykke-Andersen, J.3
-
50
-
-
84905732318
-
Global characterization of the oocyte-to-embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism
-
Stoeckius M., Grün D., Kirchner M., Ayoub S., Torti F., Piano F., Herzog M., Selbach M., Rajewsky N. Global characterization of the oocyte-to-embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism. EMBO J. 2014, 33:1751-1766.
-
(2014)
EMBO J.
, vol.33
, pp. 1751-1766
-
-
Stoeckius, M.1
Grün, D.2
Kirchner, M.3
Ayoub, S.4
Torti, F.5
Piano, F.6
Herzog, M.7
Selbach, M.8
Rajewsky, N.9
-
51
-
-
84897571308
-
Poly(A)-tail profiling reveals an embryonic switch in translational control
-
Subtelny A.O., Eichhorn S.W., Chen G.R., Sive H., Bartel D.P. Poly(A)-tail profiling reveals an embryonic switch in translational control. Nature 2014, 508:66-71.
-
(2014)
Nature
, vol.508
, pp. 66-71
-
-
Subtelny, A.O.1
Eichhorn, S.W.2
Chen, G.R.3
Sive, H.4
Bartel, D.P.5
-
52
-
-
77649252314
-
NANOS2 interacts with the CCR4-NOT deadenylation complex and leads to suppression of specific RNAs
-
Suzuki A., Igarashi K., Aisaki K., Kanno J., Saga Y. NANOS2 interacts with the CCR4-NOT deadenylation complex and leads to suppression of specific RNAs. Proc. Natl. Acad. Sci. USA 2010, 107:3594-3599.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 3594-3599
-
-
Suzuki, A.1
Igarashi, K.2
Aisaki, K.3
Kanno, J.4
Saga, Y.5
-
53
-
-
70350023619
-
The maternal-to-zygotic transition: a play in two acts
-
Tadros W., Lipshitz H.D. The maternal-to-zygotic transition: a play in two acts. Development 2009, 136:3033-3042.
-
(2009)
Development
, vol.136
, pp. 3033-3042
-
-
Tadros, W.1
Lipshitz, H.D.2
-
54
-
-
33845744069
-
SMAUG is a major regulator of maternal mRNA destabilization in Drosophila and its translation is activated by the PAN GU kinase
-
Tadros W., Goldman A.L., Babak T., Menzies F., Vardy L., Orr-Weaver T., Hughes T.R., Westwood J.T., Smibert C.A., Lipshitz H.D. SMAUG is a major regulator of maternal mRNA destabilization in Drosophila and its translation is activated by the PAN GU kinase. Dev. Cell 2007, 12:143-155.
-
(2007)
Dev. Cell
, vol.12
, pp. 143-155
-
-
Tadros, W.1
Goldman, A.L.2
Babak, T.3
Menzies, F.4
Vardy, L.5
Orr-Weaver, T.6
Hughes, T.R.7
Westwood, J.T.8
Smibert, C.A.9
Lipshitz, H.D.10
-
55
-
-
77951715627
-
An evolutionarily conserved mechanism for controlling the efficiency of protein translation
-
Tuller T., Carmi A., Vestsigian K., Navon S., Dorfan Y., Zaborske J., Pan T., Dahan O., Furman I., Pilpel Y. An evolutionarily conserved mechanism for controlling the efficiency of protein translation. Cell 2010, 141:344-354.
-
(2010)
Cell
, vol.141
, pp. 344-354
-
-
Tuller, T.1
Carmi, A.2
Vestsigian, K.3
Navon, S.4
Dorfan, Y.5
Zaborske, J.6
Pan, T.7
Dahan, O.8
Furman, I.9
Pilpel, Y.10
-
56
-
-
84867163995
-
Extensive alternative polyadenylation during zebrafish development
-
Ulitsky I., Shkumatava A., Jan C.H., Subtelny A.O., Koppstein D., Bell G.W., Sive H., Bartel D.P. Extensive alternative polyadenylation during zebrafish development. Genome Res. 2012, 22:2054-2066.
-
(2012)
Genome Res.
, vol.22
, pp. 2054-2066
-
-
Ulitsky, I.1
Shkumatava, A.2
Jan, C.H.3
Subtelny, A.O.4
Koppstein, D.5
Bell, G.W.6
Sive, H.7
Bartel, D.P.8
-
57
-
-
84861911071
-
Translational control by changes in poly(A) tail length: recycling mRNAs
-
Weill L., Belloc E., Bava F.A., Méndez R. Translational control by changes in poly(A) tail length: recycling mRNAs. Nat. Struct. Mol. Biol. 2012, 19:577-585.
-
(2012)
Nat. Struct. Mol. Biol.
, vol.19
, pp. 577-585
-
-
Weill, L.1
Belloc, E.2
Bava, F.A.3
Méndez, R.4
-
58
-
-
84940891331
-
Codon usage influences the local rate of translation elongation to regulate co-translational protein folding
-
Yu C.H., Dang Y., Zhou Z., Wu C., Zhao F., Sachs M.S., Liu Y. Codon usage influences the local rate of translation elongation to regulate co-translational protein folding. Mol. Cell 2015, 59:744-754.
-
(2015)
Mol. Cell
, vol.59
, pp. 744-754
-
-
Yu, C.H.1
Dang, Y.2
Zhou, Z.3
Wu, C.4
Zhao, F.5
Sachs, M.S.6
Liu, Y.7
-
59
-
-
47549087539
-
Deadenylation is prerequisite for P-body formation and mRNA decay in mammalian cells
-
Zheng D., Ezzeddine N., Chen C.Y., Zhu W., He X., Shyu A.B. Deadenylation is prerequisite for P-body formation and mRNA decay in mammalian cells. J. Cell Biol. 2008, 182:89-101.
-
(2008)
J. Cell Biol.
, vol.182
, pp. 89-101
-
-
Zheng, D.1
Ezzeddine, N.2
Chen, C.Y.3
Zhu, W.4
He, X.5
Shyu, A.B.6
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