-
1
-
-
60149093432
-
RNA and disease
-
19239895
-
T.A.Cooper, L.Wan, G.Dreyfuss. RNA and disease. Cell 2009; 136:777-93; PMID:19239895; http://dx.doi.org/10.1016/j.cell.2009.02.011
-
(2009)
Cell
, vol.136
, pp. 777-793
-
-
Cooper, T.A.1
Wan, L.2
Dreyfuss, G.3
-
2
-
-
84934435678
-
Regulation of alternative pre-mRNA splicing
-
24549656
-
M.B.Coelho, C.W.Smith. Regulation of alternative pre-mRNA splicing. Methods Mol Biol 2014; 1126:55-82; PMID:24549656; http://dx.doi.org/10.1007/978-1-62703-980-2_5
-
(2014)
Methods Mol Biol
, vol.1126
, pp. 55-82
-
-
Coelho, M.B.1
Smith, C.W.2
-
3
-
-
60349104299
-
The spliceosome: design principles of a dynamic RNP machine
-
19239890
-
M.C.Wahl, C.L.Will, R.Luhrmann. The spliceosome: design principles of a dynamic RNP machine. Cell 2009; 136:701-18; PMID:19239890; http://dx.doi.org/10.1016/j.cell.2009.02.009
-
(2009)
Cell
, vol.136
, pp. 701-718
-
-
Wahl, M.C.1
Will, C.L.2
Luhrmann, R.3
-
4
-
-
34447130937
-
RS domain-splicing signal interactions in splicing of U12-type and U2-type introns
-
17603499
-
H.Shen, M.R.Green. RS domain-splicing signal interactions in splicing of U12-type and U2-type introns. Nat Struct Mol Biol 2007; 14:597-603; PMID:17603499; http://dx.doi.org/10.1038/nsmb1263
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 597-603
-
-
Shen, H.1
Green, M.R.2
-
5
-
-
84921334197
-
A comprehensive survey of non-canonical splice sites in the human transcriptome
-
25123659
-
G.E.Parada, R.Munita, C.A.Cerda, K.Gysling. A comprehensive survey of non-canonical splice sites in the human transcriptome. Nucleic Acids Res 2014; 42:10564-78; PMID:25123659; http://dx.doi.org/10.1093/nar/gku744
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 10564-10578
-
-
Parada, G.E.1
Munita, R.2
Cerda, C.A.3
Gysling, K.4
-
6
-
-
77952029221
-
Deciphering the splicing code
-
20445623
-
Y.Barash, J.A.Calarco, W.Gao, Q.Pan, X.Wang, O.Shai, B.J.Blencowe, B.J.Frey. Deciphering the splicing code. Nature 2010; 465:53-9; PMID:20445623; http://dx.doi.org/10.1038/nature09000
-
(2010)
Nature
, vol.465
, pp. 53-59
-
-
Barash, Y.1
Calarco, J.A.2
Gao, W.3
Pan, Q.4
Wang, X.5
Shai, O.6
Blencowe, B.J.7
Frey, B.J.8
-
7
-
-
33646852092
-
Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing
-
16682442
-
H.Suzuki, Y.Zuo, J.Wang, M.Q.Zhang, A.Malhotra, A.Mayeda. Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing. Nucleic Acids Res 2006; 34:e63; PMID:16682442; http://dx.doi.org/10.1093/nar/gkl151
-
(2006)
Nucleic Acids Res
, vol.34
, pp. e63
-
-
Suzuki, H.1
Zuo, Y.2
Wang, J.3
Zhang, M.Q.4
Malhotra, A.5
Mayeda, A.6
-
8
-
-
17044429815
-
Delay in synthesis of the 3′ splice site promotes trans-splicing of the preceding 5′ splice site
-
15837427
-
T.Takahara, B.Tasic, T.Maniatis, H.Akanuma, S.Yanagisawa. Delay in synthesis of the 3′ splice site promotes trans-splicing of the preceding 5′ splice site. Mol Cell 2005; 18:245-51; PMID:15837427; http://dx.doi.org/10.1016/j.molcel.2005.03.018
-
(2005)
Mol Cell
, vol.18
, pp. 245-251
-
-
Takahara, T.1
Tasic, B.2
Maniatis, T.3
Akanuma, H.4
Yanagisawa, S.5
-
9
-
-
70350754211
-
Rates of in situ transcription and splicing in large human genes
-
19820712
-
J.Singh, R.A.Padgett. Rates of in situ transcription and splicing in large human genes. Nat Struct Mol Biol 2009; 16:1128-33; PMID:19820712; http://dx.doi.org/10.1038/nsmb.1666
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 1128-1133
-
-
Singh, J.1
Padgett, R.A.2
-
10
-
-
78650961149
-
Epigenetics in alternative pre-mRNA splicing
-
21215366
-
R.F.Luco, M.Allo, I.E.Schor, A.R.Kornblihtt, T.Misteli. Epigenetics in alternative pre-mRNA splicing. Cell 2011; 144:16-26; PMID:21215366; http://dx.doi.org/10.1016/j.cell.2010.11.056
-
(2011)
Cell
, vol.144
, pp. 16-26
-
-
Luco, R.F.1
Allo, M.2
Schor, I.E.3
Kornblihtt, A.R.4
Misteli, T.5
-
11
-
-
84861848461
-
Co-transcriptional regulation of alternative pre-mRNA splicing
-
22326677
-
S.Shukla, S.Oberdoerffer. Co-transcriptional regulation of alternative pre-mRNA splicing. Biochim Biophys Acta 2012; 1819:673-83; PMID:22326677; http://dx.doi.org/10.1016/j.bbagrm.2012.01.014
-
(2012)
Biochim Biophys Acta
, vol.1819
, pp. 673-683
-
-
Shukla, S.1
Oberdoerffer, S.2
-
12
-
-
60149110358
-
Pre-mRNA processing reaches back to transcription and ahead to translation
-
19239889
-
M.J.Moore, N.J.Proudfoot. Pre-mRNA processing reaches back to transcription and ahead to translation. Cell 2009; 136:688-700; PMID:19239889; http://dx.doi.org/10.1016/j.cell.2009.02.001
-
(2009)
Cell
, vol.136
, pp. 688-700
-
-
Moore, M.J.1
Proudfoot, N.J.2
-
13
-
-
70349125488
-
Co-transcriptional splicing of constitutive and alternative exons
-
19656867
-
A.Pandya-Jones, D.L.Black. Co-transcriptional splicing of constitutive and alternative exons. Rna 2009; 15:1896-908; PMID:19656867; http://dx.doi.org/10.1261/rna.1714509
-
(2009)
Rna
, vol.15
, pp. 1896-1908
-
-
Pandya-Jones, A.1
Black, D.L.2
-
14
-
-
70350005395
-
Cotranscriptionality”: the transcription elongation complex as a nexus for nuclear transactions
-
19854129
-
R.Perales, D.Bentley. “Cotranscriptionality”: the transcription elongation complex as a nexus for nuclear transactions. Mol Cell 2009; 36:178-91; PMID:19854129; http://dx.doi.org/10.1016/j.molcel.2009.09.018
-
(2009)
Mol Cell
, vol.36
, pp. 178-191
-
-
Perales, R.1
Bentley, D.2
-
15
-
-
81855183655
-
Single-molecule imaging of transcriptionally coupled and uncoupled splicing
-
22118462
-
D.Y.Vargas, K.Shah, M.Batish, M.Levandoski, S.Sinha, S.A.Marras, P.Schedl, S.Tyagi. Single-molecule imaging of transcriptionally coupled and uncoupled splicing. Cell 2011; 147:1054-65; PMID:22118462; http://dx.doi.org/10.1016/j.cell.2011.10.024
-
(2011)
Cell
, vol.147
, pp. 1054-1065
-
-
Vargas, D.Y.1
Shah, K.2
Batish, M.3
Levandoski, M.4
Sinha, S.5
Marras, S.A.6
Schedl, P.7
Tyagi, S.8
-
16
-
-
0025008005
-
Ordered splicing of thymidine kinase pre-mRNA during the S phase of the cell cycle
-
2398906
-
J.M.Gudas, G.B.Knight, A.B.Pardee. Ordered splicing of thymidine kinase pre-mRNA during the S phase of the cell cycle. Mol Cell Biol 1990; 10:5591-5; PMID:2398906; http://dx.doi.org/10.1128/MCB.10.10.5591
-
(1990)
Mol Cell Biol
, vol.10
, pp. 5591-5595
-
-
Gudas, J.M.1
Knight, G.B.2
Pardee, A.B.3
-
17
-
-
0019186903
-
Processing of high molecular weight ovalbumin and ovomucoid precursor RNAs to messenger RNA
-
7428039
-
M.J.Tsai, A.C.Ting, J.L.Nordstrom, W.Zimmer, B.W.O'Malley. Processing of high molecular weight ovalbumin and ovomucoid precursor RNAs to messenger RNA. Cell 1980; 22:219-30; PMID:7428039; http://dx.doi.org/10.1016/0092-8674(80)90170-1
-
(1980)
Cell
, vol.22
, pp. 219-230
-
-
Tsai, M.J.1
Ting, A.C.2
Nordstrom, J.L.3
Zimmer, W.4
O'Malley, B.W.5
-
18
-
-
77951200179
-
First come, first served revisited: factors affecting the same alternative splicing event have different effects on the relative rates of intron removal
-
20357345
-
M.de la Mata, C.Lafaille, A.R.Kornblihtt. First come, first served revisited: factors affecting the same alternative splicing event have different effects on the relative rates of intron removal. Rna 2010; 16:904-12; PMID:20357345; http://dx.doi.org/10.1261/rna.1993510
-
(2010)
Rna
, vol.16
, pp. 904-912
-
-
de la Mata, M.1
Lafaille, C.2
Kornblihtt, A.R.3
-
19
-
-
70649088961
-
The peculiarities of large intron splicing in animals
-
19924226
-
S.Shepard, M.McCreary, A.Fedorov. The peculiarities of large intron splicing in animals. PloS One 2009; 4:e7853; PMID:19924226; http://dx.doi.org/10.1371/journal.pone.0007853
-
(2009)
PloS One
, vol.4
, pp. e7853
-
-
Shepard, S.1
McCreary, M.2
Fedorov, A.3
-
20
-
-
0032247577
-
Generation of alternative Ultrabithorax isoforms and stepwise removal of a large intron by resplicing at exon-exon junctions
-
9885566
-
A.R.Hatton, V.Subramaniam, A.J.Lopez. Generation of alternative Ultrabithorax isoforms and stepwise removal of a large intron by resplicing at exon-exon junctions. Mol Cell 1998; 2:787-96; PMID:9885566; http://dx.doi.org/10.1016/S1097-2765(00)80293-2
-
(1998)
Mol Cell
, vol.2
, pp. 787-796
-
-
Hatton, A.R.1
Subramaniam, V.2
Lopez, A.J.3
-
21
-
-
22144486964
-
Subdivision of large introns in Drosophila by recursive splicing at nonexonic elements
-
15802507
-
J.M.Burnette, E.Miyamoto-Sato, M.A.Schaub, J.Conklin, A.J.Lopez. Subdivision of large introns in Drosophila by recursive splicing at nonexonic elements. Genetics 2005; 170:661-74; PMID:15802507; http://dx.doi.org/10.1534/genetics.104.039701
-
(2005)
Genetics
, vol.170
, pp. 661-674
-
-
Burnette, J.M.1
Miyamoto-Sato, E.2
Schaub, M.A.3
Conklin, J.4
Lopez, A.J.5
-
22
-
-
27944507676
-
Stabilization and analysis of intron lariats in vivo
-
16314266
-
J.F.Conklin, A.Goldman, A.J.Lopez. Stabilization and analysis of intron lariats in vivo. Methods 2005; 37:368-75; PMID:16314266; http://dx.doi.org/10.1016/j.ymeth.2005.08.002
-
(2005)
Methods
, vol.37
, pp. 368-375
-
-
Conklin, J.F.1
Goldman, A.2
Lopez, A.J.3
-
23
-
-
0041627818
-
Intrasplicing–analysis of long intron sequences
-
12603040
-
S.Ott, Y.Tamada, H.Bannai, K.Nakai, S.Miyano. Intrasplicing–analysis of long intron sequences. Pac Symp on Biocomput 8 2003:339-50; PMID:12603040
-
(2003)
Pac Symp on Biocomput 8
, pp. 339-350
-
-
Ott, S.1
Tamada, Y.2
Bannai, H.3
Nakai, K.4
Miyano, S.5
-
24
-
-
84875230031
-
Nested introns in an intron: evidence of multi-step splicing in a large intron of the human dystrophin pre-mRNA
-
23395799
-
H.Suzuki, T.Kameyama, K.Ohe, T.Tsukahara, A.Mayeda. Nested introns in an intron: evidence of multi-step splicing in a large intron of the human dystrophin pre-mRNA. FEBS Lett 2013; 587:555-61; PMID:23395799; http://dx.doi.org/10.1016/j.febslet.2013.01.057
-
(2013)
FEBS Lett
, vol.587
, pp. 555-561
-
-
Suzuki, H.1
Kameyama, T.2
Ohe, K.3
Tsukahara, T.4
Mayeda, A.5
-
25
-
-
70449629063
-
Large introns in relation to alternative splicing and gene evolution: a case study of Drosophila bruno-3
-
19840385
-
N.P.Kandul, M.A.Noor. Large introns in relation to alternative splicing and gene evolution: a case study of Drosophila bruno-3. BMC Genet 2009; 10:67; PMID:19840385; http://dx.doi.org/10.1186/1471-2156-10-67
-
(2009)
BMC Genet
, vol.10
, pp. 67
-
-
Kandul, N.P.1
Noor, M.A.2
-
26
-
-
84870561895
-
Re-splicing of mature mRNA in cancer cells promotes activation of distant weak alternative splice sites
-
22675076
-
T.Kameyama, H.Suzuki, A.Mayeda. Re-splicing of mature mRNA in cancer cells promotes activation of distant weak alternative splice sites. Nucleic Acids Res 2012; 40:7896-906; PMID:22675076; http://dx.doi.org/10.1093/nar/gks520
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 7896-7906
-
-
Kameyama, T.1
Suzuki, H.2
Mayeda, A.3
-
27
-
-
84930224948
-
Recursive splicing in long vertebrate genes
-
25970246
-
C.R.Sibley, W.Emmett, L.Blazquez, A.Faro, N.Haberman, M.Briese, D.Trabzuni, M.Ryten, M.E.Weale, J.Hardy, et al. Recursive splicing in long vertebrate genes. Nature 2015; 521:371-5; PMID:25970246; http://dx.doi.org/10.1038/nature14466
-
(2015)
Nature
, vol.521
, pp. 371-375
-
-
Sibley, C.R.1
Emmett, W.2
Blazquez, L.3
Faro, A.4
Haberman, N.5
Briese, M.6
Trabzuni, D.7
Ryten, M.8
Weale, M.E.9
Hardy, J.10
-
28
-
-
84930224941
-
Genome-wide identification of zero nucleotide recursive splicing in Drosophila
-
25970244
-
M.O.Duff, S.Olson, X.Wei, S.C.Garrett, A.Osman, M.Bolisetty, A.Plocik, S.E.Celniker, B.R.Graveley. Genome-wide identification of zero nucleotide recursive splicing in Drosophila. Nature 2015; 521:376-9; PMID:25970244; http://dx.doi.org/10.1038/nature14475
-
(2015)
Nature
, vol.521
, pp. 376-379
-
-
Duff, M.O.1
Olson, S.2
Wei, X.3
Garrett, S.C.4
Osman, A.5
Bolisetty, M.6
Plocik, A.7
Celniker, S.E.8
Graveley, B.R.9
-
29
-
-
0028837312
-
The human dystrophin gene requires 16 hours to be transcribed and is cotranscriptionally spliced
-
7719347
-
C.N.Tennyson, H.J.Klamut, R.G.Worton. The human dystrophin gene requires 16 hours to be transcribed and is cotranscriptionally spliced. Nat Genet 1995; 9:184-90; PMID:7719347; http://dx.doi.org/10.1038/ng0295-184
-
(1995)
Nat Genet
, vol.9
, pp. 184-190
-
-
Tennyson, C.N.1
Klamut, H.J.2
Worton, R.G.3
-
30
-
-
84942079796
-
SplicePie: a novel analytical approach for the detection of alternative, non-sequential and recursive splicing
-
I.Pulyakhina, I.Gazzoli, P.A.t Hoen, N.Verwey, J.D.Dunnen, A.Aartsma-Rus, et al. SplicePie: a novel analytical approach for the detection of alternative, non-sequential and recursive splicing. Nucleic Acids Res 2015; 43(12):e80
-
(2015)
Nucleic Acids Res
-
-
Pulyakhina, I.1
Gazzoli, I.2
t Hoen, P.A.3
Verwey, N.4
Dunnen, J.D.5
Aartsma-Rus, A.6
-
31
-
-
84899561113
-
Targeted sequencing for gene discovery and quantification using RNA CaptureSeq
-
24705597
-
T.R.Mercer, M.B.Clark, J.Crawford, M.E.Brunck, D.J.Gerhardt, R.J.Taft, L.K.Nielsen, M.E.Dinger, J.S.Mattick. Targeted sequencing for gene discovery and quantification using RNA CaptureSeq. Nat Protoc 2014; 9:989-1009; PMID:24705597; http://dx.doi.org/10.1038/nprot.2014.058
-
(2014)
Nat Protoc
, vol.9
, pp. 989-1009
-
-
Mercer, T.R.1
Clark, M.B.2
Crawford, J.3
Brunck, M.E.4
Gerhardt, D.J.5
Taft, R.J.6
Nielsen, L.K.7
Dinger, M.E.8
Mattick, J.S.9
-
32
-
-
59849113821
-
Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing
-
19182786
-
A.Gnirke, A.Melnikov, J.Maguire, P.Rogov, E.M.LeProust, W.Brockman, T.Fennell, G.Giannoukos, S.Fisher, C.Russ, et al. Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing. Nat Biotechnol 2009; 27:182-9; PMID:19182786; http://dx.doi.org/10.1038/nbt.1523
-
(2009)
Nat Biotechnol
, vol.27
, pp. 182-189
-
-
Gnirke, A.1
Melnikov, A.2
Maguire, J.3
Rogov, P.4
LeProust, E.M.5
Brockman, W.6
Fennell, T.7
Giannoukos, G.8
Fisher, S.9
Russ, C.10
-
33
-
-
84865777822
-
Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs
-
22955974
-
H.Tilgner, D.G.Knowles, R.Johnson, C.A.Davis, S.Chakrabortty, S.Djebali, J.Curado, M.Snyder, T.R.Gingeras, R.Guigó. Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs. Genome Res 2012; 22:1616-25; PMID:22955974; http://dx.doi.org/10.1101/gr.134445.111
-
(2012)
Genome Res
, vol.22
, pp. 1616-1625
-
-
Tilgner, H.1
Knowles, D.G.2
Johnson, R.3
Davis, C.A.4
Chakrabortty, S.5
Djebali, S.6
Curado, J.7
Snyder, M.8
Gingeras, T.R.9
Guigó, R.10
-
34
-
-
0025362714
-
A Sequential splicing mechanism promotes selection of an optimal exon by repositioning a downstream 5′ splice site in preprotachykinin pre-mRNA
-
2210374
-
F.H.Nasim, P.A.Spears, H.M.Hoffmann, H.C.Kuo, P.J.Grabowski. A Sequential splicing mechanism promotes selection of an optimal exon by repositioning a downstream 5′ splice site in preprotachykinin pre-mRNA. Genes Dev 1990; 4:1172-84; PMID:2210374; http://dx.doi.org/10.1101/gad.4.7.1172
-
(1990)
Genes Dev
, vol.4
, pp. 1172-1184
-
-
Nasim, F.H.1
Spears, P.A.2
Hoffmann, H.M.3
Kuo, H.C.4
Grabowski, P.J.5
-
35
-
-
0027495952
-
Order of intron removal during splicing of endogenous adenine phosphoribosyltransferase and dihydrofolate reductase pre-mRNA
-
8413221
-
O.Kessler, Y.Jiang, L.A.Chasin. Order of intron removal during splicing of endogenous adenine phosphoribosyltransferase and dihydrofolate reductase pre-mRNA. Mol Cell Biol 1993; 13:6211-22; PMID:8413221; http://dx.doi.org/10.1128/MCB.13.10.6211
-
(1993)
Mol Cell Biol
, vol.13
, pp. 6211-6222
-
-
Kessler, O.1
Jiang, Y.2
Chasin, L.A.3
-
36
-
-
84865145537
-
Splicing of mouse p53 pre-mRNA does not always follow the “first come, first served” principle and may be influenced by cisplatin treatment and serum starvation
-
22740133
-
M.Yang, J.Wu, S.H.Wu, A.D.Bi, D.J.Liao. Splicing of mouse p53 pre-mRNA does not always follow the “first come, first served” principle and may be influenced by cisplatin treatment and serum starvation. Mol Biol Reports 2012; 39:9247-56; PMID:22740133; http://dx.doi.org/10.1007/s11033-012-1798-2
-
(2012)
Mol Biol Reports
, vol.39
, pp. 9247-9256
-
-
Yang, M.1
Wu, J.2
Wu, S.H.3
Bi, A.D.4
Liao, D.J.5
-
37
-
-
51149102891
-
Intron length increases oscillatory periods of gene expression in animal cells
-
18703678
-
I.A.Swinburne, D.G.Miguez, D.Landgraf, P.A.Silver. Intron length increases oscillatory periods of gene expression in animal cells. Genes Dev 2008; 22:2342-6; PMID:18703678; http://dx.doi.org/10.1101/gad.1696108
-
(2008)
Genes Dev
, vol.22
, pp. 2342-2346
-
-
Swinburne, I.A.1
Miguez, D.G.2
Landgraf, D.3
Silver, P.A.4
-
38
-
-
0037107547
-
On the importance of being co-transcriptional
-
12244124
-
K.M.Neugebauer. On the importance of being co-transcriptional. J Cell Sci 2002; 115:3865-71; PMID:12244124; http://dx.doi.org/10.1242/jcs.00073
-
(2002)
J Cell Sci
, vol.115
, pp. 3865-3871
-
-
Neugebauer, K.M.1
-
39
-
-
0242490558
-
Dawdling polymerases allow introns time to splice
-
14583735
-
N.J.Proudfoot. Dawdling polymerases allow introns time to splice. Nat Struct Biol 2003; 10:876-8; PMID:14583735; http://dx.doi.org/10.1038/nsb1103-876
-
(2003)
Nat Struct Biol
, vol.10
, pp. 876-878
-
-
Proudfoot, N.J.1
-
40
-
-
0023185274
-
Precision and orderliness in splicing
-
M. Aebi, C. Weissman. Precision and orderliness in splicing. Trends Genet 1987; 3:102-107; http://dx.doi.org/10.1016/0168-9525(87)90193-4
-
(1987)
Trends Genet
, vol.3
, pp. 102-107
-
-
-
41
-
-
0023718118
-
An explanation for the phenotypic differences between patients bearing partial deletions of the DMD locus
-
3384440
-
A.P.Monaco, C.J.Bertelson, S.Liechti-Gallati, H.Moser, L.M.Kunkel. An explanation for the phenotypic differences between patients bearing partial deletions of the DMD locus. Genomics 1988; 2:90-5; PMID:3384440; http://dx.doi.org/10.1016/0888-7543(88)90113-9
-
(1988)
Genomics
, vol.2
, pp. 90-95
-
-
Monaco, A.P.1
Bertelson, C.J.2
Liechti-Gallati, S.3
Moser, H.4
Kunkel, L.M.5
-
42
-
-
77957322170
-
Antisense-mediated modulation of splicing: therapeutic implications for Duchenne muscular dystrophy
-
20523110
-
A.Aartsma-Rus. Antisense-mediated modulation of splicing: therapeutic implications for Duchenne muscular dystrophy. RNA Biol 2010; 7:453-61; PMID:20523110; http://dx.doi.org/10.4161/rna.7.4.12264
-
(2010)
RNA Biol
, vol.7
, pp. 453-461
-
-
Aartsma-Rus, A.1
-
43
-
-
30844436415
-
Functional analysis of 114 exon-internal AONs for targeted DMD exon skipping: indication for steric hindrance of SR protein binding sites
-
16396622
-
A.Aartsma-Rus, C.L.De Winter, A.A.Janson, W.E.Kaman, G.J.Van Ommen, J.T.Den Dunnen, J.C.Van Deutekom. Functional analysis of 114 exon-internal AONs for targeted DMD exon skipping: indication for steric hindrance of SR protein binding sites. Oligonucleotides 2005; 15:284-97; PMID:16396622; http://dx.doi.org/10.1089/oli.2005.15.284
-
(2005)
Oligonucleotides
, vol.15
, pp. 284-297
-
-
Aartsma-Rus, A.1
De Winter, C.L.2
Janson, A.A.3
Kaman, W.E.4
Van Ommen, G.J.5
Den Dunnen, J.T.6
Van Deutekom, J.C.7
-
44
-
-
34248511708
-
Antisense oligonucleotide-induced exon skipping across the human dystrophin gene transcript
-
17285139
-
S.D.Wilton, A.M.Fall, P.L.Harding, G.McClorey, C.Coleman, S.Fletcher. Antisense oligonucleotide-induced exon skipping across the human dystrophin gene transcript. Mol Ther 2007; 15:1288-96; PMID:17285139; http://dx.doi.org/10.1038/sj.mt.6300095
-
(2007)
Mol Ther
, vol.15
, pp. 1288-1296
-
-
Wilton, S.D.1
Fall, A.M.2
Harding, P.L.3
McClorey, G.4
Coleman, C.5
Fletcher, S.6
-
45
-
-
0347003516
-
Antisense-induced multiexon skipping for Duchenne muscular dystrophy makes more sense
-
14681829
-
A.Aartsma-Rus, A.A.Janson, W.E.Kaman, M.Bremmer-Bout, G.J.van Ommen, J.T.den Dunnen, J.C.van Deutekom. Antisense-induced multiexon skipping for Duchenne muscular dystrophy makes more sense. Am J Hum Genet 2004; 74:83-92; PMID:14681829; http://dx.doi.org/10.1086/381039
-
(2004)
Am J Hum Genet
, vol.74
, pp. 83-92
-
-
Aartsma-Rus, A.1
Janson, A.A.2
Kaman, W.E.3
Bremmer-Bout, M.4
van Ommen, G.J.5
den Dunnen, J.T.6
van Deutekom, J.C.7
-
46
-
-
0024466501
-
The molecular basis for Duchenne versus Becker muscular dystrophy: correlation of severity with type of deletion
-
2491009
-
M.Koenig, A.H.Beggs, M.Moyer, S.Scherpf, K.Heindrich, T.Bettecken, G.Meng, C.R.Müller, M.Lindlöf, H.Kaariainen. The molecular basis for Duchenne versus Becker muscular dystrophy: correlation of severity with type of deletion. Am J Hum Genet 1989; 45:498-506; PMID:2491009
-
(1989)
Am J Hum Genet
, vol.45
, pp. 498-506
-
-
Koenig, M.1
Beggs, A.H.2
Moyer, M.3
Scherpf, S.4
Heindrich, K.5
Bettecken, T.6
Meng, G.7
Müller, C.R.8
Lindlöf, M.9
Kaariainen, H.10
-
47
-
-
0024815723
-
Topography of the Duchenne muscular dystrophy (DMD) gene: FIGE and cDNA analysis of 194 cases reveals 115 deletions and 13 duplications
-
2573997
-
J.T.Den Dunnen, P.M.Grootscholten, E.Bakker, L.A.Blonden, H.B.Ginjaar, M.C.Wapenaar, H.M.van Paassen, C.van Broeckhoven, P.L.Pearson, G.J.van Ommen. Topography of the Duchenne muscular dystrophy (DMD) gene: FIGE and cDNA analysis of 194 cases reveals 115 deletions and 13 duplications. Am J Hum Genet 1989; 45:835-47; PMID:2573997; http://dx.doi.org/10.2174/13892029113149990004
-
(1989)
Am J Hum Genet
, vol.45
, pp. 835-847
-
-
Den Dunnen, J.T.1
Grootscholten, P.M.2
Bakker, E.3
Blonden, L.A.4
Ginjaar, H.B.5
Wapenaar, M.C.6
van Paassen, H.M.7
van Broeckhoven, C.8
Pearson, P.L.9
van Ommen, G.J.10
-
48
-
-
0030700474
-
Exon-intron organization of the human dystrophin gene
-
9344670
-
C.Nobile, J.Marchi, V.Nigro, R.G.Roberts, G.A.Danieli. Exon-intron organization of the human dystrophin gene. Genomics 1997; 45:421-4; PMID:9344670; http://dx.doi.org/10.1006/geno.1997.4911
-
(1997)
Genomics
, vol.45
, pp. 421-424
-
-
Nobile, C.1
Marchi, J.2
Nigro, V.3
Roberts, R.G.4
Danieli, G.A.5
-
49
-
-
61649097962
-
Theoretic applicability of antisense-mediated exon skipping for Duchenne muscular dystrophy mutations
-
19156838
-
A.Aartsma-Rus, I.Fokkema, J.Verschuuren, I.Ginjaar, J.van Deutekom, G.J.van Ommen, J.T.den Dunnen. Theoretic applicability of antisense-mediated exon skipping for Duchenne muscular dystrophy mutations. Hum Mutat 2009; 30:293-9; PMID:19156838; http://dx.doi.org/10.1002/humu.20918
-
(2009)
Hum Mutat
, vol.30
, pp. 293-299
-
-
Aartsma-Rus, A.1
Fokkema, I.2
Verschuuren, J.3
Ginjaar, I.4
van Deutekom, J.5
van Ommen, G.J.6
den Dunnen, J.T.7
-
50
-
-
84865288612
-
Bodywide skipping of exons 45-55 in dystrophic mdx52 mice by systemic antisense delivery
-
22869723
-
Y.Aoki, T.Yokota, T.Nagata, A.Nakamura, J.Tanihata, T.Saito, S.M.Duguez, K.Nagaraju, E.P.Hoffman, T.Partridge, et al. Bodywide skipping of exons 45-55 in dystrophic mdx52 mice by systemic antisense delivery. Proc Natl Acad Sci U S A 2012; 109:13763-8; PMID:22869723; http://dx.doi.org/10.1073/pnas.1204638109
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 13763-13768
-
-
Aoki, Y.1
Yokota, T.2
Nagata, T.3
Nakamura, A.4
Tanihata, J.5
Saito, T.6
Duguez, S.M.7
Nagaraju, K.8
Hoffman, E.P.9
Partridge, T.10
-
51
-
-
0034326362
-
Analysis of canonical and non-canonical splice sites in mammalian genomes
-
11058137
-
M.Burset, I.A.Seledtsov, V.V.Solovyev. Analysis of canonical and non-canonical splice sites in mammalian genomes. Nucleic Acids Res 2000; 28:4364-75; PMID:11058137; http://dx.doi.org/10.1093/nar/28.21.4364
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 4364-4375
-
-
Burset, M.1
Seledtsov, I.A.2
Solovyev, V.V.3
-
52
-
-
34447647096
-
Cellular senescence in human myoblasts is overcome by human telomerase reverse transcriptase and cyclin-dependent kinase 4: consequences in aging muscle and therapeutic strategies for muscular dystrophies
-
17559502
-
C.H.Zhu, V.Mouly, R.N.Cooper, K.Mamchaoui, A.Bigot, J.W.Shay, J.P.Di Santo, G.S.Butler-Browne, W.E.Wright. Cellular senescence in human myoblasts is overcome by human telomerase reverse transcriptase and cyclin-dependent kinase 4: consequences in aging muscle and therapeutic strategies for muscular dystrophies. Aging Cell 2007; 6:515-23; PMID:17559502; http://dx.doi.org/10.1111/j.1474-9726.2007.00306.x
-
(2007)
Aging Cell
, vol.6
, pp. 515-523
-
-
Zhu, C.H.1
Mouly, V.2
Cooper, R.N.3
Mamchaoui, K.4
Bigot, A.5
Shay, J.W.6
Di Santo, J.P.7
Butler-Browne, G.S.8
Wright, W.E.9
-
53
-
-
79954570149
-
Dual exon skipping in myostatin and dystrophin for Duchenne muscular dystrophy
-
21507246
-
D.U.Kemaladewi, W.M.Hoogaars, S.H.van Heiningen, S.Terlouw, D.J.de Gorter, J.T.den Dunnen, G.J.van Ommen, A.Aartsma-Rus, P.ten Dijke, P.A.'t Hoen. Dual exon skipping in myostatin and dystrophin for Duchenne muscular dystrophy. BMC Med Genomics 2011; 4:36; PMID:21507246; http://dx.doi.org/10.1186/1755-8794-4-36
-
(2011)
BMC Med Genomics
, vol.4
, pp. 36
-
-
Kemaladewi, D.U.1
Hoogaars, W.M.2
van Heiningen, S.H.3
Terlouw, S.4
de Gorter, D.J.5
den Dunnen, J.T.6
van Ommen, G.J.7
Aartsma-Rus, A.8
ten Dijke, P.9
't Hoen, P.A.10
-
54
-
-
0001190006
-
Identification of newly transcribed RNA
-
18265405, , ; Chapter 4: Unit 4.10. Pages: 1-12; PMID:;
-
M.E.Greenberg, T.P.Bender. Identification of newly transcribed RNA. Curr Prot Mol Biol; Chapter 4: Unit 4.10. Pages: 1-12; PMID:18265405; http://dx.doi.org/10.1002/0471142727.mb0410s78.
-
Curr Prot Mol Biol
-
-
Greenberg, M.E.1
Bender, T.P.2
-
55
-
-
77951820899
-
Fast and SNP-tolerant detection of complex variants and splicing in short reads
-
20147302
-
T.D.Wu, S.Nacu. Fast and SNP-tolerant detection of complex variants and splicing in short reads. Bioinformatics 2010; 26:873-81; PMID:20147302; http://dx.doi.org/10.1093/bioinformatics/btq057
-
(2010)
Bioinformatics
, vol.26
, pp. 873-881
-
-
Wu, T.D.1
Nacu, S.2
-
56
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
19505943
-
H.Li, B.Handsaker, A.Wysoker, T.Fennell, J.Ruan, N.Homer, G.Marth, G.Abecasis, R.Durbin, 1000 Genome Project Data Processing Subgroup. The Sequence Alignment/Map format and SAMtools. Bioinformatics 2009; 25:2078-9; PMID:19505943; http://dx.doi.org/10.1093/bioinformatics/btp352
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
Marth, G.7
Abecasis, G.8
Durbin, R.9
-
57
-
-
64549150047
-
Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data
-
19237396
-
J.M.Ruijter, C.Ramakers, W.M.Hoogaars, Y.Karlen, O.Bakker, M.J.van den Hoff, A.F.Moorman. Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data. Nucleic Acids Res 2009; 37:e45; PMID:19237396; http://dx.doi.org/10.1093/nar/gkp045
-
(2009)
Nucleic Acids Res
, vol.37
, pp. e45
-
-
Ruijter, J.M.1
Ramakers, C.2
Hoogaars, W.M.3
Karlen, Y.4
Bakker, O.5
van den Hoff, M.J.6
Moorman, A.F.7
|