-
1
-
-
84887627512
-
Bringing the gut microbiota into focus through microbial culture: recent progress and future perspective
-
Allen-Vercoe E. Bringing the gut microbiota into focus through microbial culture: recent progress and future perspective. Current Opinion in Microbiology 2013, 16:625-629.
-
(2013)
Current Opinion in Microbiology
, vol.16
, pp. 625-629
-
-
Allen-Vercoe, E.1
-
2
-
-
84878683337
-
Characterization of microbial metabolism of Syrah grape products in an invitro colon model using targeted and non-targeted analytical approaches
-
Aura A.M., Mattila I., Hyötyläinen T., Gopalacharyulu P., Cheynier V., Souquet J.M., et al. Characterization of microbial metabolism of Syrah grape products in an invitro colon model using targeted and non-targeted analytical approaches. European Journal of Nutrition 2012, 52:833-846.
-
(2012)
European Journal of Nutrition
, vol.52
, pp. 833-846
-
-
Aura, A.M.1
Mattila, I.2
Hyötyläinen, T.3
Gopalacharyulu, P.4
Cheynier, V.5
Souquet, J.M.6
-
3
-
-
84886537483
-
Lactobacillus plantarum IFPL935 favors the initial metabolism of red wine polyphenols when added to a colonic microbiota
-
Barroso E., Sanchez-Patán F., Martín-Alvárez P.J., Bartolomé B., Moreno-Arribas M.V., Peláez C., et al. Lactobacillus plantarum IFPL935 favors the initial metabolism of red wine polyphenols when added to a colonic microbiota. Journal of Agricultural and Food Chemistry 2013, 61:10163-10172.
-
(2013)
Journal of Agricultural and Food Chemistry
, vol.61
, pp. 10163-10172
-
-
Barroso, E.1
Sanchez-Patán, F.2
Martín-Alvárez, P.J.3
Bartolomé, B.4
Moreno-Arribas, M.V.5
Peláez, C.6
-
4
-
-
84904993692
-
Lactobacillus plantarum IFPL935 impacts colonic metabolism in a simulator of the human gut microbiota during feeding with red wine polyphenols
-
Barroso E., Van de Wiele T., Jiménez-Girón A., Muñoz-González I., Martín-Alvárez P.J., Moreno-Arribas M.V., et al. Lactobacillus plantarum IFPL935 impacts colonic metabolism in a simulator of the human gut microbiota during feeding with red wine polyphenols. Applied Microbiology and Biotechnology 2014, 98:6805-6815.
-
(2014)
Applied Microbiology and Biotechnology
, vol.98
, pp. 6805-6815
-
-
Barroso, E.1
Van de Wiele, T.2
Jiménez-Girón, A.3
Muñoz-González, I.4
Martín-Alvárez, P.J.5
Moreno-Arribas, M.V.6
-
5
-
-
33646585117
-
Two routes of metabolic cross-feeding between bifidobacteria and butyrate-producing anaerobes from the human gut
-
Belenguer A., Duncan S.H., Calder G., Holtrop G., Louis P., Lobley G.E., et al. Two routes of metabolic cross-feeding between bifidobacteria and butyrate-producing anaerobes from the human gut. Applied and Environmental Microbiology 2006, 72:3593-3599.
-
(2006)
Applied and Environmental Microbiology
, vol.72
, pp. 3593-3599
-
-
Belenguer, A.1
Duncan, S.H.2
Calder, G.3
Holtrop, G.4
Louis, P.5
Lobley, G.E.6
-
6
-
-
35448960761
-
Impact of pH on lactate formation and utilization by human fecal microbial communities
-
Belenguer A., Duncan S.H., Holtrop G., Anderson E., Lobley G., Flint H.J. Impact of pH on lactate formation and utilization by human fecal microbial communities. Applied and Environmental Microbiology 2007, 73:6526-6533.
-
(2007)
Applied and Environmental Microbiology
, vol.73
, pp. 6526-6533
-
-
Belenguer, A.1
Duncan, S.H.2
Holtrop, G.3
Anderson, E.4
Lobley, G.5
Flint, H.J.6
-
7
-
-
33745789622
-
Comparative effects of exopolysaccharides from lactic acid bacteria and fructooligosaccharides on infant gut microbiota tested in an invitro colonic model with immobilized cells
-
Cinquin C., Le Blay G., Fliss I., Lacroix C. Comparative effects of exopolysaccharides from lactic acid bacteria and fructooligosaccharides on infant gut microbiota tested in an invitro colonic model with immobilized cells. FEMS Microbiology Ecology 2006, 57:226-238.
-
(2006)
FEMS Microbiology Ecology
, vol.57
, pp. 226-238
-
-
Cinquin, C.1
Le Blay, G.2
Fliss, I.3
Lacroix, C.4
-
8
-
-
84892828465
-
Diet rapidly and reproducibly alters the human gut microbiome
-
David L.A., Maurice C.F., Carmody R.N., Gootenberg D.B., Button J.E., Wolfe B.E., et al. Diet rapidly and reproducibly alters the human gut microbiome. Nature 2014, 505:559-563.
-
(2014)
Nature
, vol.505
, pp. 559-563
-
-
David, L.A.1
Maurice, C.F.2
Carmody, R.N.3
Gootenberg, D.B.4
Button, J.E.5
Wolfe, B.E.6
-
9
-
-
0033798758
-
Fermentation by gut microbiota cultured in a simulator of the human intestinal microbial ecosystem is improved by supplementing a soygerm powder
-
De Boever P., Deplancke B., Verstraete W. Fermentation by gut microbiota cultured in a simulator of the human intestinal microbial ecosystem is improved by supplementing a soygerm powder. Journal of Nutrition 2000, 130:2599-2606.
-
(2000)
Journal of Nutrition
, vol.130
, pp. 2599-2606
-
-
De Boever, P.1
Deplancke, B.2
Verstraete, W.3
-
10
-
-
79960847595
-
Cross-feeding between bifidobacteria and butyrate-producing colon bacteria explains bifdobacterial competitiveness, butyrate production, and gas production
-
De Vuyst L., Leroy F. Cross-feeding between bifidobacteria and butyrate-producing colon bacteria explains bifdobacterial competitiveness, butyrate production, and gas production. International Journal of Food Microbiology 2011, 149:73-80.
-
(2011)
International Journal of Food Microbiology
, vol.149
, pp. 73-80
-
-
De Vuyst, L.1
Leroy, F.2
-
11
-
-
33847233644
-
Reduced dietary intake of carbohydrate, by obese subjects, results in decreased concentrations of butyrate and butyrate-producing bacteria in feces
-
Duncan S.H., Belenguer A., Holtrop G., Johnstone A.M., Lobley G.E., Flint H.J. Reduced dietary intake of carbohydrate, by obese subjects, results in decreased concentrations of butyrate and butyrate-producing bacteria in feces. Applied and Environmental Microbiology 2007, 73:1073-1078.
-
(2007)
Applied and Environmental Microbiology
, vol.73
, pp. 1073-1078
-
-
Duncan, S.H.1
Belenguer, A.2
Holtrop, G.3
Johnstone, A.M.4
Lobley, G.E.5
Flint, H.J.6
-
13
-
-
33845527152
-
Cross-feeding between Bifidobacterium longum BB536 and acetate converting, butyrate-producing colon bacteria during growth on oligofructose
-
Falony G., Viachou A., Verbrugghe K., De Vuyst L. Cross-feeding between Bifidobacterium longum BB536 and acetate converting, butyrate-producing colon bacteria during growth on oligofructose. Applied and Environmental Microbiology 2006, 72:7835-7841.
-
(2006)
Applied and Environmental Microbiology
, vol.72
, pp. 7835-7841
-
-
Falony, G.1
Viachou, A.2
Verbrugghe, K.3
De Vuyst, L.4
-
14
-
-
84890818028
-
Three-stage continuous culture system with a self-generated anaerobia to study the regionalized metabolism of the human gut microbiota
-
Feria-Gervasio D., Tottey W., Gaci N., Alric M., Cardot J.M., Peyret P., et al. Three-stage continuous culture system with a self-generated anaerobia to study the regionalized metabolism of the human gut microbiota. Journal of Microbiological Methods 2014, 96:111-118.
-
(2014)
Journal of Microbiological Methods
, vol.96
, pp. 111-118
-
-
Feria-Gervasio, D.1
Tottey, W.2
Gaci, N.3
Alric, M.4
Cardot, J.M.5
Peyret, P.6
-
15
-
-
38349049462
-
Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis
-
Flint H.J., Bayer E.A., Rincon M.T., Lamed R., White B.A. Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis. Nature Reviews Microbiology 2008, 6:121-131.
-
(2008)
Nature Reviews Microbiology
, vol.6
, pp. 121-131
-
-
Flint, H.J.1
Bayer, E.A.2
Rincon, M.T.3
Lamed, R.4
White, B.A.5
-
16
-
-
0024117598
-
Use of a three-stage continuous culture system to study the effect of mucin on dissimilatory sulfate reduction and methanogenesis by mixed populations of human gut bacteria
-
Gibson G.R., Cummings J.H., Macfarlane G.T. Use of a three-stage continuous culture system to study the effect of mucin on dissimilatory sulfate reduction and methanogenesis by mixed populations of human gut bacteria. Applied and Environmental Microbiology 1988, 54:2750-2755.
-
(1988)
Applied and Environmental Microbiology
, vol.54
, pp. 2750-2755
-
-
Gibson, G.R.1
Cummings, J.H.2
Macfarlane, G.T.3
-
17
-
-
84867698101
-
Relevance and challenges in modeling human gastric and small intestinal digestion
-
Guerra A., Etienne-Mesmin L., Livrelli V., Denis S., Blanquet-Diot S., Alric M. Relevance and challenges in modeling human gastric and small intestinal digestion. Trends in Biotechnology 2012, 30:591-600.
-
(2012)
Trends in Biotechnology
, vol.30
, pp. 591-600
-
-
Guerra, A.1
Etienne-Mesmin, L.2
Livrelli, V.3
Denis, S.4
Blanquet-Diot, S.5
Alric, M.6
-
18
-
-
84869232547
-
Influence of Bacillus subtilis C-3102 on microbiota in a dynamic invitro model of the gastrointestinal tract simulating human conditions
-
Hatanaka M., Nakamura Y., Maathuis A.J., Venema K., Murota I., Yamamoto N. Influence of Bacillus subtilis C-3102 on microbiota in a dynamic invitro model of the gastrointestinal tract simulating human conditions. Beneficial Microbes 2012, 3:229-236.
-
(2012)
Beneficial Microbes
, vol.3
, pp. 229-236
-
-
Hatanaka, M.1
Nakamura, Y.2
Maathuis, A.J.3
Venema, K.4
Murota, I.5
Yamamoto, N.6
-
19
-
-
84861980130
-
Interactions between the microbiota and the immune system
-
Hooper L.V., Littman D.R., Macpherson A.J. Interactions between the microbiota and the immune system. Science 2012, 336:1268-1273.
-
(2012)
Science
, vol.336
, pp. 1268-1273
-
-
Hooper, L.V.1
Littman, D.R.2
Macpherson, A.J.3
-
20
-
-
78149380589
-
Ahuman gastric simulator (HGS) to study food digestion in human stomach
-
Kong F., Singh R.P. Ahuman gastric simulator (HGS) to study food digestion in human stomach. Journal of Food Science 2010, 75:E627-E635.
-
(2010)
Journal of Food Science
, vol.75
, pp. E627-E635
-
-
Kong, F.1
Singh, R.P.2
-
21
-
-
63849241608
-
Diversity, metabolism and microbial ecology of butyrate-producing bacteria from the human large intestine
-
Louis P., Flint H.J. Diversity, metabolism and microbial ecology of butyrate-producing bacteria from the human large intestine. FEMS Microbiology Letters 2009, 294:1-8.
-
(2009)
FEMS Microbiology Letters
, vol.294
, pp. 1-8
-
-
Louis, P.1
Flint, H.J.2
-
22
-
-
0031944894
-
Validation of a three-stage compound continuous culture system for investigating the effect of retention time on the ecology and metabolism of bacteria in the human colon
-
Macfarlane G.T., Macfarlane S., Gibson G.R. Validation of a three-stage compound continuous culture system for investigating the effect of retention time on the ecology and metabolism of bacteria in the human colon. Microbial Ecology 1998, 35:180-187.
-
(1998)
Microbial Ecology
, vol.35
, pp. 180-187
-
-
Macfarlane, G.T.1
Macfarlane, S.2
Gibson, G.R.3
-
23
-
-
0001151974
-
Amulticompartmental dynamic computer-controlled model simulating the stomach and small intestine
-
Minekus M., Marteau P., Havenaar R., Huis in 't Veld J.H.J. Amulticompartmental dynamic computer-controlled model simulating the stomach and small intestine. Alternatives to Lab Animals 1995, 23:197-209.
-
(1995)
Alternatives to Lab Animals
, vol.23
, pp. 197-209
-
-
Minekus, M.1
Marteau, P.2
Havenaar, R.3
Huis in 't Veld, J.H.J.4
-
24
-
-
0033491174
-
Acomputer-controlled system to simulate conditions of the large intestine with peristaltic mixing, water absorption and absorption of fermentation products
-
Minekus M., Smeets-Peeters M., Bernalier A., Marol-Bonnin S., Havenaar R., Marteau P., et al. Acomputer-controlled system to simulate conditions of the large intestine with peristaltic mixing, water absorption and absorption of fermentation products. Applied Microbiology and Biotechnology 1999, 53:108-114.
-
(1999)
Applied Microbiology and Biotechnology
, vol.53
, pp. 108-114
-
-
Minekus, M.1
Smeets-Peeters, M.2
Bernalier, A.3
Marol-Bonnin, S.4
Havenaar, R.5
Marteau, P.6
-
25
-
-
84879514636
-
Bacterial diversity in meconium of preterm neonates and evolution of their fecal microbiota during the first month of life
-
Moles L., Gómez M., Heilig H., Bustos G., Fuentes S., de Vos W., et al. Bacterial diversity in meconium of preterm neonates and evolution of their fecal microbiota during the first month of life. PLoS One 2013, 8:e66986.
-
(2013)
PLoS One
, vol.8
, pp. e66986
-
-
Moles, L.1
Gómez, M.2
Heilig, H.3
Bustos, G.4
Fuentes, S.5
de Vos, W.6
-
26
-
-
0028154701
-
Validation of the simulator of the human intestinal microbial ecosystem (SHIME) reactor using microorganism-associated activities
-
Molly K., Van de Woestyne M., De Smet I., Verstraete W. Validation of the simulator of the human intestinal microbial ecosystem (SHIME) reactor using microorganism-associated activities. Microbial Ecology in Health and Disease 1994, 7:191-200.
-
(1994)
Microbial Ecology in Health and Disease
, vol.7
, pp. 191-200
-
-
Molly, K.1
Van de Woestyne, M.2
De Smet, I.3
Verstraete, W.4
-
27
-
-
0027251567
-
Development of a 5-step multichamber reactor as a simulation of the human intestinal microbial ecosystem
-
Molly K., Van de Woestyne M., Verstraete W. Development of a 5-step multichamber reactor as a simulation of the human intestinal microbial ecosystem. Applied Microbiology and Biotechnology 1993, 39:254-258.
-
(1993)
Applied Microbiology and Biotechnology
, vol.39
, pp. 254-258
-
-
Molly, K.1
Van de Woestyne, M.2
Verstraete, W.3
-
28
-
-
0027460328
-
Profiling of complex populations by denaturating gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer G., De Waal E.C., Uitterlinden G.A. Profiling of complex populations by denaturating gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Applied and Environmental Microbiology 1993, 59:695-700.
-
(1993)
Applied and Environmental Microbiology
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
De Waal, E.C.2
Uitterlinden, G.A.3
-
29
-
-
0029796310
-
Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis
-
Nübel U., Engelen B., Felske A., Snaidr J., Wieshuber A., Amann R.I., et al. Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis. Journal of Bacteriology 1996, 178:5636-5643.
-
(1996)
Journal of Bacteriology
, vol.178
, pp. 5636-5643
-
-
Nübel, U.1
Engelen, B.2
Felske, A.3
Snaidr, J.4
Wieshuber, A.5
Amann, R.I.6
-
30
-
-
79151479117
-
The intestinal microbiome: a separate organ inside the body with the metabolic potential to influence the bioactivity of botanicals
-
Possemiers S., Bolca S., Verstraete W., Heyerick A. The intestinal microbiome: a separate organ inside the body with the metabolic potential to influence the bioactivity of botanicals. Fitoterapia 2011, 82:53-66.
-
(2011)
Fitoterapia
, vol.82
, pp. 53-66
-
-
Possemiers, S.1
Bolca, S.2
Verstraete, W.3
Heyerick, A.4
-
31
-
-
4344645434
-
PCR-DGGE- based quantification of stability of the microbial community in a simulator of the human intestinal microbial ecosystem
-
Possemiers S., Verthe K., Uyttendaele S., Verstraete W. PCR-DGGE- based quantification of stability of the microbial community in a simulator of the human intestinal microbial ecosystem. FEMS Microbiology Ecology 2004, 49:495-507.
-
(2004)
FEMS Microbiology Ecology
, vol.49
, pp. 495-507
-
-
Possemiers, S.1
Verthe, K.2
Uyttendaele, S.3
Verstraete, W.4
-
32
-
-
78049502175
-
Evaluating the microbial diversity of an invitro model of the human large intestine by phylogenetic microarray analysis
-
Rajilić-Stojanović M., Maathuis A., Heilig H.G., Venema K., De Vos W.M., Smidt H. Evaluating the microbial diversity of an invitro model of the human large intestine by phylogenetic microarray analysis. Microbiology 2010, 156:3270-3281.
-
(2010)
Microbiology
, vol.156
, pp. 3270-3281
-
-
Rajilić-Stojanović, M.1
Maathuis, A.2
Heilig, H.G.3
Venema, K.4
De Vos, W.M.5
Smidt, H.6
-
33
-
-
84889976808
-
Polysaccharides utilization in human gut bacterium Bacteroides thetaiotaomicron: comparative genomics reconstruction of metabolic and regulatory networks
-
Ravcheev D.A., Godzik A., Osterman A.L., Rodionov D.A. Polysaccharides utilization in human gut bacterium Bacteroides thetaiotaomicron: comparative genomics reconstruction of metabolic and regulatory networks. BMC Genomics 2013, 14:873.
-
(2013)
BMC Genomics
, vol.14
, pp. 873
-
-
Ravcheev, D.A.1
Godzik, A.2
Osterman, A.L.3
Rodionov, D.A.4
-
34
-
-
17144421192
-
Invitro investigation into the potential prebiotic activity of honey oligosaccharides
-
Sanz M.L., Polemis N., Morales V., Corzo N., Drakoularakou A., Gibson G.R., et al. Invitro investigation into the potential prebiotic activity of honey oligosaccharides. Journal of Agricultural and Food Chemistry 2005, 53:2914-2921.
-
(2005)
Journal of Agricultural and Food Chemistry
, vol.53
, pp. 2914-2921
-
-
Sanz, M.L.1
Polemis, N.2
Morales, V.3
Corzo, N.4
Drakoularakou, A.5
Gibson, G.R.6
-
35
-
-
84873723371
-
The influence of diet on the gut microbiota
-
Scott K.P., Gratz S.W., Sheridan P.O., Flint H.J., Duncan S.H. The influence of diet on the gut microbiota. Pharmacological Research 2013, 69:52-60.
-
(2013)
Pharmacological Research
, vol.69
, pp. 52-60
-
-
Scott, K.P.1
Gratz, S.W.2
Sheridan, P.O.3
Flint, H.J.4
Duncan, S.H.5
-
36
-
-
84894133363
-
Comparative genome analysis of Megasphaera sp. reveals niche specialization and its potential role in the human gut
-
Shetty S.A., Marathe N.P., Lanjekar V., Ranade D., Shouche Y.S. Comparative genome analysis of Megasphaera sp. reveals niche specialization and its potential role in the human gut. PLoS One 2013, 8:e79353.
-
(2013)
PLoS One
, vol.8
, pp. e79353
-
-
Shetty, S.A.1
Marathe, N.P.2
Lanjekar, V.3
Ranade, D.4
Shouche, Y.S.5
-
38
-
-
77955566063
-
Microbial community development in a dynamic gut model is reproducible, colon region specific, and selective for Bacteroidetes andClostridium cluster IX
-
Van den Abbeele P., Grootaert C., Marzorati M., Possemiers S., Verstraete W., Gérard P., et al. Microbial community development in a dynamic gut model is reproducible, colon region specific, and selective for Bacteroidetes andClostridium cluster IX. Applied and Environmental Microbiology 2010, 76:5237-5246.
-
(2010)
Applied and Environmental Microbiology
, vol.76
, pp. 5237-5246
-
-
Van den Abbeele, P.1
Grootaert, C.2
Marzorati, M.3
Possemiers, S.4
Verstraete, W.5
Gérard, P.6
-
39
-
-
33846274193
-
Inulin-type fructans of longer degree of polymerization exert more pronounced invitro prebiotic effects
-
Van de Wiele T., Boon N., Possemiers S., Jacobs H., Verstraete W. Inulin-type fructans of longer degree of polymerization exert more pronounced invitro prebiotic effects. Journal of Applied Microbiology 2007, 102:452-460.
-
(2007)
Journal of Applied Microbiology
, vol.102
, pp. 452-460
-
-
Van de Wiele, T.1
Boon, N.2
Possemiers, S.3
Jacobs, H.4
Verstraete, W.5
-
42
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
Wu G.D., Chen J., Hoffmann C., Bittinger K., Chen Y.Y., Keilbaugh S.A., et al. Linking long-term dietary patterns with gut microbial enterotypes. Science 2011, 334:105-108.
-
(2011)
Science
, vol.334
, pp. 105-108
-
-
Wu, G.D.1
Chen, J.2
Hoffmann, C.3
Bittinger, K.4
Chen, Y.Y.5
Keilbaugh, S.A.6
|