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Volumn 35, Issue 5, 2015, Pages 770-777

Retroviral transcriptional regulation and embryonic stem cells: War and peace

Author keywords

[No Author keywords available]

Indexed keywords

LONG UNTRANSLATED RNA; RNA; TRANSCRIPTION FACTOR; CHROMATIN; HETEROCHROMATIN; TRANSPOSON;

EID: 84961287889     PISSN: 02707306     EISSN: 10985549     Source Type: Journal    
DOI: 10.1128/MCB.01293-14     Document Type: Short Survey
Times cited : (80)

References (93)
  • 1
    • 0020048733 scopus 로고
    • Multiple arrangements of viral DNA and an activated host oncogene in bursal lymphomas
    • Payne GS, Bishop JM, Varmus HE. 1982. Multiple arrangements of viral DNA and an activated host oncogene in bursal lymphomas. Nature 295: 209-214. http://dx.doi.org/10.1038/295209a0.
    • (1982) Nature , vol.295 , pp. 209-214
    • Payne, G.S.1    Bishop, J.M.2    Varmus, H.E.3
  • 3
    • 0242568295 scopus 로고
    • Germ line integration and Mendelian transmission of the exogenous Moloney leukemia virus
    • Jaenisch R. 1976. Germ line integration and Mendelian transmission of the exogenous Moloney leukemia virus. Proc Natl Acad Sci U S A 73: 1260-1264. http://dx.doi.org/10.1073/pnas.73.4.1260.
    • (1976) Proc Natl Acad Sci U S A , vol.73 , pp. 1260-1264
    • Jaenisch, R.1
  • 4
    • 0017740410 scopus 로고
    • Germ line integration of Moloney leukemia virus: effect of homozygosity at the m-mulV locus
    • Jaenisch R. 1977. Germ line integration of Moloney leukemia virus: effect of homozygosity at the m-mulV locus. Cell 12:691-696. http://dx.doi.org /10.1016/0092-8674(77)90269-0.
    • (1977) Cell , vol.12 , pp. 691-696
    • Jaenisch, R.1
  • 5
    • 82955178663 scopus 로고    scopus 로고
    • Antiretroviral restriction factors
    • Hatziioannou T, Bieniasz PD. 2011. Antiretroviral restriction factors. Curr Opin Virol 1:526-532. http://dx.doi.org/10.1016/j.coviro.2011.10 .007.
    • (2011) Curr Opin Virol , vol.1 , pp. 526-532
    • Hatziioannou, T.1    Bieniasz, P.D.2
  • 6
    • 84871253668 scopus 로고    scopus 로고
    • Host restriction factors in retroviral infection: promises in virus-host interaction
    • Zheng YH, Jeang KT, Tokunaga K. 2012. Host restriction factors in retroviral infection: promises in virus-host interaction. Retrovirology 9:112. http://dx.doi.org/10.1186/1742-4690-9-112.
    • (2012) Retrovirology , vol.9 , pp. 112
    • Zheng, Y.H.1    Jeang, K.T.2    Tokunaga, K.3
  • 7
    • 0017739615 scopus 로고
    • Virus infection of murine teratocarcinoma stem cell lines
    • Teich NM, Weiss RA, Martin GR, Lowy DR. 1977. Virus infection of murine teratocarcinoma stem cell lines. Cell 12:973-982. http://dx.doi.org /10.1016/0092-8674(77)90162-3.
    • (1977) Cell , vol.12 , pp. 973-982
    • Teich, N.M.1    Weiss, R.A.2    Martin, G.R.3    Lowy, D.R.4
  • 8
    • 0021798378 scopus 로고
    • Spatial distribution of transcripts of the long repeated ETn sequence during early mouse embryogenesis
    • Brulet P, Condamine H, Jacob F. 1985. Spatial distribution of transcripts of the long repeated ETn sequence during early mouse embryogenesis. Proc Natl Acad Sci U S A 82:2054-2058. http://dx.doi.org/10.1073/pnas .82.7.2054.
    • (1985) Proc Natl Acad Sci U S A , vol.82 , pp. 2054-2058
    • Brulet, P.1    Condamine, H.2    Jacob, F.3
  • 10
    • 0019826665 scopus 로고
    • Establishment in culture of pluripotential cells from mouse embryos
    • Evans MJ, Kaufman MH. 1981. Establishment in culture of pluripotential cells from mouse embryos. Nature 292:154-156. http://dx.doi.org/10 .1038/292154a0.
    • (1981) Nature , vol.292 , pp. 154-156
    • Evans, M.J.1    Kaufman, M.H.2
  • 11
    • 0023007610 scopus 로고
    • Chromosomal position or virus mutation permits retrovirus expression in embryonal carcinoma cells
    • Barklis E, Mulligan RC, Jaenisch R. 1986. Chromosomal position or virus mutation permits retrovirus expression in embryonal carcinoma cells. Cell 47:391-399. http://dx.doi.org/10.1016/0092-8674(86)90596-9.
    • (1986) Cell , vol.47 , pp. 391-399
    • Barklis, E.1    Mulligan, R.C.2    Jaenisch, R.3
  • 12
    • 0018787608 scopus 로고
    • The primer tRNA for Moloney murine leukemia virus DNA synthesis. Nucleotide sequence and aminoacylation of tRNAPro.
    • Harada F, Peters GG, Dahlberg JE. 1979. The primer tRNA for Moloney murine leukemia virus DNA synthesis. Nucleotide sequence and aminoacylation of tRNAPro. J Biol Chem 254:10979-10985.
    • (1979) J Biol Chem , vol.254 , pp. 10979-10985
    • Harada, F.1    Peters, G.G.2    Dahlberg, J.E.3
  • 13
    • 0025968544 scopus 로고
    • A stem cell-specific silencer in the primer-binding site of a retrovirus
    • Petersen R, Kempler G, Barklis E. 1991. A stem cell-specific silencer in the primer-binding site of a retrovirus. Mol Cell Biol 11:1214-1221.
    • (1991) Mol Cell Biol , vol.11 , pp. 1214-1221
    • Petersen, R.1    Kempler, G.2    Barklis, E.3
  • 14
    • 67349170854 scopus 로고    scopus 로고
    • Embryonic stem cells use ZFP809 to silence retroviral DNAs
    • Wolf D, Goff SP. 2009. Embryonic stem cells use ZFP809 to silence retroviral DNAs. Nature 458:1201-1204. http://dx.doi.org/10.1038 /nature07844.
    • (2009) Nature , vol.458 , pp. 1201-1204
    • Wolf, D.1    Goff, S.P.2
  • 15
    • 33751007001 scopus 로고    scopus 로고
    • The KAP1 corepressor functions to coordinate the assembly of de novo HP1-demarcated microenvironments of heterochromatin required for KRAB zinc finger proteinmediated transcriptional repression
    • Sripathy SP, Stevens J, Schultz DC. 2006. The KAP1 corepressor functions to coordinate the assembly of de novo HP1-demarcated microenvironments of heterochromatin required for KRAB zinc finger proteinmediated transcriptional repression. Mol Cell Biol 26:8623-8638. http: //dx.doi.org/10.1128/MCB.00487-06.
    • (2006) Mol Cell Biol , vol.26 , pp. 8623-8638
    • Sripathy, S.P.1    Stevens, J.2    Schultz, D.C.3
  • 16
    • 34848819391 scopus 로고    scopus 로고
    • TRIM28 mediates primer binding site-targeted silencing of murine leukemia virus in embryonic cells
    • Wolf D, Goff S. 2007. TRIM28 mediates primer binding site-targeted silencing of murine leukemia virus in embryonic cells. Cell 131:46-57. http://dx.doi.org/10.1016/j.cell.2007.07.026.
    • (2007) Cell , vol.131 , pp. 46-57
    • Wolf, D.1    Goff, S.2
  • 17
    • 84892437617 scopus 로고    scopus 로고
    • Proviral silencing in embryonic cells is regulated by yin yang 1
    • Schlesinger S, Lee AH, Wang GZ, Green L, Goff SP. 2013. Proviral silencing in embryonic cells is regulated by yin yang 1. Cell Rep 4:50-58. http://dx.doi.org/10.1016/j.celrep.2013.06.003.
    • (2013) Cell Rep , vol.4 , pp. 50-58
    • Schlesinger, S.1    Lee, A.H.2    Wang, G.Z.3    Green, L.4    Goff, S.P.5
  • 18
    • 0033795914 scopus 로고    scopus 로고
    • Retroviral expression in embryonic stem cells and hematopoietic stem cells
    • Cherry SR, Biniszkiewicz D, van Parijs L, Baltimore D, Jaenisch R. 2000. Retroviral expression in embryonic stem cells and hematopoietic stem cells. Mol Cell Biol 20:7419-7426. http://dx.doi.org/10.1128/MCB .20.20.7419-7426.2000.
    • (2000) Mol Cell Biol , vol.20 , pp. 7419-7426
    • Cherry, S.R.1    Biniszkiewicz, D.2    van Parijs, L.3    Baltimore, D.4    Jaenisch, R.5
  • 19
    • 0034904598 scopus 로고    scopus 로고
    • Silencing of gene expression: implications for design of retrovirus vectors
    • Pannell D, Ellis J. 2001. Silencing of gene expression: implications for design of retrovirus vectors. Rev Med Virol 11:205-217. http://dx.doi.org /10.1002/rmv.316.
    • (2001) Rev Med Virol , vol.11 , pp. 205-217
    • Pannell, D.1    Ellis, J.2
  • 20
    • 42449091476 scopus 로고    scopus 로고
    • Primer binding sitedependent restriction of murine leukemia virus requires HP1 binding by TRIM28
    • Wolf D, Cammas F, Losson R, Goff SP. 2008. Primer binding sitedependent restriction of murine leukemia virus requires HP1 binding by TRIM28. J Virol 82:4675-4679. http://dx.doi.org/10.1128/JVI.02445-07.
    • (2008) J Virol , vol.82 , pp. 4675-4679
    • Wolf, D.1    Cammas, F.2    Losson, R.3    Goff, S.P.4
  • 21
    • 84892468117 scopus 로고    scopus 로고
    • EBP1, a novel host factor involved in primer binding site-dependent restriction of Moloney murine leukemia virus in embryonic cells
    • Wang GZ, Wolf D, Goff SP. 2014. EBP1, a novel host factor involved in primer binding site-dependent restriction of Moloney murine leukemia virus in embryonic cells. J Virol 88:1825-1829. http://dx.doi.org/10.1128 /JVI.02578-13.
    • (2014) J Virol , vol.88 , pp. 1825-1829
    • Wang, G.Z.1    Wolf, D.2    Goff, S.P.3
  • 23
    • 84871927765 scopus 로고    scopus 로고
    • Silencing of proviruses in embryonic cells: efficiency, stability and chromatin modifications
    • Schlesinger S, Goff S. 2013. Silencing of proviruses in embryonic cells: efficiency, stability and chromatin modifications. EMBO Rep 14:73-79. http://dx.doi.org/10.1038/embor.2012.182.
    • (2013) EMBO Rep , vol.14 , pp. 73-79
    • Schlesinger, S.1    Goff, S.2
  • 24
    • 76149142791 scopus 로고    scopus 로고
    • Polycomb complexes act redundantly to repress genomic repeats and genes
    • Leeb M, Pasini D, Novatchkova M, Jaritz M, Helin K, Wutz A. 2010. Polycomb complexes act redundantly to repress genomic repeats and genes. Genes Dev 24:265-276. http://dx.doi.org/10.1101/gad.544410.
    • (2010) Genes Dev , vol.24 , pp. 265-276
    • Leeb, M.1    Pasini, D.2    Novatchkova, M.3    Jaritz, M.4    Helin, K.5    Wutz, A.6
  • 25
    • 0042371625 scopus 로고    scopus 로고
    • The evolution, distribution and diversity of endogenous retroviruses
    • Gifford R, Tristem M. 2003. The evolution, distribution and diversity of endogenous retroviruses. Virus Genes 26:291-315. http://dx.doi.org/10 .1023/A:1024455415443.
    • (2003) Virus Genes , vol.26 , pp. 291-315
    • Gifford, R.1    Tristem, M.2
  • 28
    • 77953935308 scopus 로고    scopus 로고
    • Estimating enrichment of repetitive elements from high-throughput sequence data
    • Day DS, Luquette LJ, Park PJ, Kharchenko PV. 2010. Estimating enrichment of repetitive elements from high-throughput sequence data. Genome biology 11:R69. http://dx.doi.org/10.1186/gb-2010-11-6-r69.
    • (2010) Genome biology , vol.11 , pp. R69
    • Day, D.S.1    Luquette, L.J.2    Park, P.J.3    Kharchenko, P.V.4
  • 30
    • 84882800012 scopus 로고    scopus 로고
    • Zfp819, a novel KRAB-zinc finger protein, interacts with KAP1 and functions in genomic integrity maintenance of mouse embryonic stem cells
    • Tan X, Xu X, Elkenani M, Smorag L, Zechner U, Nolte J, Engel W, Pantakani DV. 2013. Zfp819, a novel KRAB-zinc finger protein, interacts with KAP1 and functions in genomic integrity maintenance of mouse embryonic stem cells. Stem Cell Res 11:1045-1059. http://dx.doi.org/10 .1016/j.scr.2013.07.006.
    • (2013) Stem Cell Res , vol.11 , pp. 1045-1059
    • Tan, X.1    Xu, X.2    Elkenani, M.3    Smorag, L.4    Zechner, U.5    Nolte, J.6    Engel, W.7    Pantakani, D.V.8
  • 32
    • 84897981266 scopus 로고    scopus 로고
    • Regulation of mouse retroelement MuERV-L/MERVL expression by REX1 and epigenetic control of stem cell potency
    • Schoorlemmer J, Pérez-Palacios R, Climent M, Guallar D, Muniesa P. 2014. Regulation of mouse retroelement MuERV-L/MERVL expression by REX1 and epigenetic control of stem cell potency. Front Oncol 4:14. http://dx.doi.org/10.3389/fonc.2014.00014.
    • (2014) Front Oncol , vol.4 , pp. 14
    • Schoorlemmer, J.1    Pérez-Palacios, R.2    Climent, M.3    Guallar, D.4    Muniesa, P.5
  • 33
    • 84857845592 scopus 로고    scopus 로고
    • RYBP represses endogenous retroviruses and preimplantation-and germ line-specific genes in mouse embryonic stem cells
    • Hisada K, Sanchez C, Endo TA, Endoh M, Roman-Trufero M, Sharif J, Koseki H, Vidal M. 2012. RYBP represses endogenous retroviruses and preimplantation-and germ line-specific genes in mouse embryonic stem cells. Mol Cell Biol 32:1139 -1149. http://dx.doi.org/10.1128 /MCB.06441-11.
    • (2012) Mol Cell Biol , vol.32 , pp. 1139 -1149
    • Hisada, K.1    Sanchez, C.2    Endo, T.A.3    Endoh, M.4    Roman-Trufero, M.5    Sharif, J.6    Koseki, H.7    Vidal, M.8
  • 35
    • 84876116910 scopus 로고    scopus 로고
    • A repetitive elements perspective in Polycomb epigenetics
    • Casa V, Gabellini D. 2012. A repetitive elements perspective in Polycomb epigenetics. Front Genet 3:199. http://dx.doi.org/10.3389/fgene .2012.00199.
    • (2012) Front Genet , vol.3 , pp. 199
    • Casa, V.1    Gabellini, D.2
  • 37
    • 77049292314 scopus 로고
    • Controlling elements and the gene
    • McClintock B. 1956. Controlling elements and the gene. Cold Spring Harb Symp Quant Biol 21:197-216. http://dx.doi.org/10.1101/SQB.1956 .021.01.017.
    • (1956) Cold Spring Harb Symp Quant Biol , vol.21 , pp. 197-216
    • McClintock, B.1
  • 38
    • 0023734310 scopus 로고
    • An ancient provirus has imposed androgen regulation on the adjacent mouse sex-limited protein gene
    • Stavenhagen JB, Robins DM. 1988. An ancient provirus has imposed androgen regulation on the adjacent mouse sex-limited protein gene. Cell 55:247-254. http://dx.doi.org/10.1016/0092-8674(88)90047-5.
    • (1988) Cell , vol.55 , pp. 247-254
    • Stavenhagen, J.B.1    Robins, D.M.2
  • 39
    • 0027012819 scopus 로고
    • Retrotransposons and the evolution of mammalian gene expression
    • Robins DM, Samuelson LC. 1992. Retrotransposons and the evolution of mammalian gene expression. Genetica 86:191-201. http://dx.doi.org/10 .1007/BF00133720.
    • (1992) Genetica , vol.86 , pp. 191-201
    • Robins, D.M.1    Samuelson, L.C.2
  • 40
    • 80055010534 scopus 로고    scopus 로고
    • Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals
    • Lynch VJ, Leclerc RD, May G, Wagner GP. 2011. Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals. Nat Genet 43:1154-1159. http://dx.doi.org/10.1038 /ng.917.
    • (2011) Nat Genet , vol.43 , pp. 1154-1159
    • Lynch, V.J.1    Leclerc, R.D.2    May, G.3    Wagner, G.P.4
  • 42
    • 58149507192 scopus 로고    scopus 로고
    • Effects of retroviruses on host genome function
    • Jern P, Coffin JM. 2008. Effects of retroviruses on host genome function. Annu Rev Genet 42:709-732. http://dx.doi.org/10.1146/annurev.genet .42.110807.091501.
    • (2008) Annu Rev Genet , vol.42 , pp. 709-732
    • Jern, P.1    Coffin, J.M.2
  • 43
    • 70350232064 scopus 로고    scopus 로고
    • Endogenous retroviral LTRs as promoters for human genes: a critical assessment
    • Cohen CJ, Lock WM, Mager DL. 2009. Endogenous retroviral LTRs as promoters for human genes: a critical assessment. Gene 448:105-114. http://dx.doi.org/10.1016/j.gene.2009.06.020.
    • (2009) Gene , vol.448 , pp. 105-114
    • Cohen, C.J.1    Lock, W.M.2    Mager, D.L.3
  • 45
    • 84876799419 scopus 로고    scopus 로고
    • Transposable elements as genetic regulatory substrates in early development
    • Gifford WD, Pfaff SL, Macfarlan TS. 2013. Transposable elements as genetic regulatory substrates in early development. Trends Cell Biol 23: 218-226. http://dx.doi.org/10.1016/j.tcb.2013.01.001.
    • (2013) Trends Cell Biol , vol.23 , pp. 218-226
    • Gifford, W.D.1    Pfaff, S.L.2    Macfarlan, T.S.3
  • 47
    • 84858770341 scopus 로고    scopus 로고
    • Trim28 is required for epigenetic stability during mouse oocyte to embryo transition
    • Messerschmidt DM, de Vries W, Ito M, Solter D, Ferguson-Smith A, Knowles BB. 2012. Trim28 is required for epigenetic stability during mouse oocyte to embryo transition. Science 335:1499-1502. http://dx.doi .org/10.1126/science.1216154.
    • (2012) Science , vol.335 , pp. 1499-1502
    • Messerschmidt, D.M.1    de Vries, W.2    Ito, M.3    Solter, D.4    Ferguson-Smith, A.5    Knowles, B.B.6
  • 49
    • 84858134354 scopus 로고    scopus 로고
    • The endogenous retrovirus ENS-1 provides active binding sites for transcription factors in embryonic stem cells that specify extra embryonic tissue
    • Mey A, Acloque H, Lerat E, Gounel S, Tribollet V, Blanc S, Curton D, Birot AM, Nieto MA, Samarut J. 2012. The endogenous retrovirus ENS-1 provides active binding sites for transcription factors in embryonic stem cells that specify extra embryonic tissue. Retrovirology 9:21. http://dx.doi .org/10.1186/1742-4690-9-21.
    • (2012) Retrovirology , vol.9 , pp. 21
    • Mey, A.1    Acloque, H.2    Lerat, E.3    Gounel, S.4    Tribollet, V.5    Blanc, S.6    Curton, D.7    Birot, A.M.8    Nieto, M.A.9    Samarut, J.10
  • 50
    • 0037307630 scopus 로고    scopus 로고
    • MuERV-L is one of the earliest transcribed genes in mouse one-cell embryos
    • Kigami D, Minami N, Takayama H, Imai H. 2003. MuERV-L is one of the earliest transcribed genes in mouse one-cell embryos. Biol Reprod 68:651-654. http://dx.doi.org/10.1095/biolreprod.102.007906.
    • (2003) Biol Reprod , vol.68 , pp. 651-654
    • Kigami, D.1    Minami, N.2    Takayama, H.3    Imai, H.4
  • 52
    • 77954100084 scopus 로고    scopus 로고
    • Transposable elements have rewired the core regulatory network of human embryonic stem cells
    • Kunarso G, Chia N-YY, Jeyakani J, Hwang C, Lu X, Chan Y-SS, Ng H-HH, Bourque G. 2010. Transposable elements have rewired the core regulatory network of human embryonic stem cells. Nat Genet 42:631-634. http://dx.doi.org/10.1038/ng.600.
    • (2010) Nat Genet , vol.42 , pp. 631-634
    • Kunarso, G.1    Chia, N.-Y.Y.2    Jeyakani, J.3    Hwang, C.4    Lu, X.5    Chan, Y.-S.S.6    Ng, H.-H.H.7    Bourque, G.8
  • 53
    • 84878522936 scopus 로고    scopus 로고
    • The majority of primate-specific regulatory sequences are derived from transposable elements
    • Jacques P-É, Jeyakani J, Bourque G. 2013. The majority of primate-specific regulatory sequences are derived from transposable elements. PLoS Genet 9:e1003504. http://dx.doi.org/10.1371/journal.pgen.1003504.
    • (2013) PLoS Genet , vol.9 , pp. e1003504
    • Jacques, P.-É.1    Jeyakani, J.2    Bourque, G.3
  • 54
    • 78650678570 scopus 로고    scopus 로고
    • The timing of retroviral silencing correlates with the quality of induced pluripotent stem cell lines
    • Okada M, Yoneda Y. 2011. The timing of retroviral silencing correlates with the quality of induced pluripotent stem cell lines. Biochim Biophys Acta 1810:226-235. http://dx.doi.org/10.1016/j.bbagen.2010.10.004.
    • (2011) Biochim Biophys Acta , vol.1810 , pp. 226-235
    • Okada, M.1    Yoneda, Y.2
  • 58
    • 84869881863 scopus 로고    scopus 로고
    • Transposable elements reveal a stem cell-specific class of long noncoding RNAs
    • Kelley D, Rinn J. 2012. Transposable elements reveal a stem cell-specific class of long noncoding RNAs. Genome Biol 13:R107. http://dx.doi.org /10.1186/gb-2012-13-11-r107.
    • (2012) Genome Biol , vol.13
    • Kelley, D.1    Rinn, J.2
  • 59
    • 84876864345 scopus 로고    scopus 로고
    • Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs
    • Kapusta A, Kronenberg Z, Lynch VJ, Zhuo X, Ramsay L, Bourque G, Yandell M, Feschotte C. 2013. Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs. PLoS Genet 9:e1003470. http://dx.doi.org/10.1371/journal .pgen.1003470.
    • (2013) PLoS Genet , vol.9
    • Kapusta, A.1    Kronenberg, Z.2    Lynch, V.J.3    Zhuo, X.4    Ramsay, L.5    Bourque, G.6    Yandell, M.7    Feschotte, C.8
  • 60
    • 84902682913 scopus 로고    scopus 로고
    • The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs
    • Johnson R, Guigo R. 2014. The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs. RNA 20:959-976. http: //dx.doi.org/10.1261/rna.044560.114.
    • (2014) RNA , vol.20 , pp. 959-976
    • Johnson, R.1    Guigo, R.2
  • 61
    • 84871215627 scopus 로고    scopus 로고
    • HERV-H RNA is abundant in human embryonic stem cells and a precise marker for pluripotency
    • Santoni FA, Guerra J, Luban J. 2012. HERV-H RNA is abundant in human embryonic stem cells and a precise marker for pluripotency. Retrovirology 9:111. http://dx.doi.org/10.1186/1742-4690-9-111.
    • (2012) Retrovirology , vol.9 , pp. 111
    • Santoni, F.A.1    Guerra, J.2    Luban, J.3
  • 62
    • 84886024597 scopus 로고    scopus 로고
    • Humanendogenous retrovirusK(HML-2)RNAand protein expression is a marker for human embryonic and induced pluripotent stem cells
    • Fuchs NV, Loewer S, Daley GQ, Izsvák Z, Löwer J, Löwer R. 2013. Humanendogenous retrovirusK(HML-2)RNAand protein expression is a marker for human embryonic and induced pluripotent stem cells. Retrovirology 10:115. http://dx.doi.org/10.1186/1742-4690-10-115.
    • (2013) Retrovirology , vol.10 , pp. 115
    • Fuchs, N.V.1    Loewer, S.2    Daley, G.Q.3    Izsvák, Z.4    Löwer, J.5    Löwer, R.6
  • 63
    • 84898010302 scopus 로고    scopus 로고
    • The retrovirus HERVH is a long noncoding RNA required for human embryonic stem cell identity
    • Lu X, Sachs F, Ramsay L, Jacques PE, Goke J, Bourque G, Ng HH. 2014. The retrovirus HERVH is a long noncoding RNA required for human embryonic stem cell identity. Nat Struct Mol Biol 21:423-425. http://dx .doi.org/10.1038/nsmb.2799.
    • (2014) Nat Struct Mol Biol , vol.21 , pp. 423-425
    • Lu, X.1    Sachs, F.2    Ramsay, L.3    Jacques, P.E.4    Goke, J.5    Bourque, G.6    Ng, H.H.7
  • 65
    • 84861188188 scopus 로고    scopus 로고
    • Studies of endogenous retroviruses reveal a continuing evolutionary saga
    • Stoye JP. 2012. Studies of endogenous retroviruses reveal a continuing evolutionary saga. Nat Rev Microbiol 10:395-406. http://dx.doi.org/10 .1038/nrmicro2783.
    • (2012) Nat Rev Microbiol , vol.10 , pp. 395-406
    • Stoye, J.P.1
  • 66
    • 0344413641 scopus 로고    scopus 로고
    • The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif
    • Sheehy AM, Gaddis NC, Malim MH. 2003. The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif. Nat Med 9:1404-1407. http://dx.doi.org/10.1038/nm945.
    • (2003) Nat Med , vol.9 , pp. 1404-1407
    • Sheehy, A.M.1    Gaddis, N.C.2    Malim, M.H.3
  • 67
    • 84855686649 scopus 로고    scopus 로고
    • Large-scale DNA editing of retrotransposons accelerates mammalian genome evolution
    • Carmi S, Church GM, Levanon EY. 2011. Large-scale DNA editing of retrotransposons accelerates mammalian genome evolution. Nat Commun 2:519. http://dx.doi.org/10.1038/ncomms1525.
    • (2011) Nat Commun , vol.2 , pp. 519
    • Carmi, S.1    Church, G.M.2    Levanon, E.Y.3
  • 69
    • 35948967657 scopus 로고    scopus 로고
    • Role of APOBEC3 in genetic diversity among endogenous murine leukemia viruses
    • Jern P, Stoye JP, Coffin JM. 2007. Role of APOBEC3 in genetic diversity among endogenous murine leukemia viruses. PLoS Genet 3:2014-2022. http://dx.doi.org/10.1371/journal.pgen.0030183.
    • (2007) PLoS Genet , vol.3 , pp. 2014-2022
    • Jern, P.1    Stoye, J.P.2    Coffin, J.M.3
  • 70
    • 0023139734 scopus 로고
    • Six distinct nuclear factors interact with the 75-base-pair repeat of the Moloney murine leukemia virus enhancer
    • Speck NA, Baltimore D. 1987. Six distinct nuclear factors interact with the 75-base-pair repeat of the Moloney murine leukemia virus enhancer. Mol Cell Biol 7:1101-1110.
    • (1987) Mol Cell Biol , vol.7 , pp. 1101-1110
    • Speck, N.A.1    Baltimore, D.2
  • 71
    • 0024543546 scopus 로고
    • Negative control region at the 5= end of murine leukemia virus long terminal repeats
    • Flanagan JR, Krieg AM, Max EE, Khan AS. 1989. Negative control region at the 5= end of murine leukemia virus long terminal repeats. Mol Cell Biol 9:739-746.
    • (1989) Mol Cell Biol , vol.9 , pp. 739-746
    • Flanagan, J.R.1    Krieg, A.M.2    Max, E.E.3    Khan, A.S.4
  • 72
    • 0025073227 scopus 로고
    • Alignment of U3 region sequences of mammalian type C viruses: identification of highly conserved motifs and implications for enhancer design
    • Golemis EA, Speck NA, Hopkins N. 1990. Alignment of U3 region sequences of mammalian type C viruses: identification of highly conserved motifs and implications for enhancer design. J Virol 64:534-542.
    • (1990) J Virol , vol.64 , pp. 534-542
    • Golemis, E.A.1    Speck, N.A.2    Hopkins, N.3
  • 73
    • 0031657705 scopus 로고    scopus 로고
    • In vivo footprinting of the enhancer sequences in the upstream long terminal repeat of Moloney murine leukemia virus: differential binding of nuclear factors in different cell types
    • Granger SW, Fan H. 1998. In vivo footprinting of the enhancer sequences in the upstream long terminal repeat of Moloney murine leukemia virus: differential binding of nuclear factors in different cell types. J Virol 72: 8961-8970.
    • (1998) J Virol , vol.72 , pp. 8961-8970
    • Granger, S.W.1    Fan, H.2
  • 74
    • 0032989105 scopus 로고    scopus 로고
    • Core-binding factor influences the disease specificity of Moloney murine leukemia virus
    • Lewis AF, Stacy T, Green WR, Taddesse-Heath L, Hartley JW, Speck NA. 1999. Core-binding factor influences the disease specificity of Moloney murine leukemia virus. J Virol 73:5535-5547.
    • (1999) J Virol , vol.73 , pp. 5535-5547
    • Lewis, A.F.1    Stacy, T.2    Green, W.R.3    Taddesse-Heath, L.4    Hartley, J.W.5    Speck, N.A.6
  • 75
    • 84860589346 scopus 로고    scopus 로고
    • Retrotransposons as a major source of epigenetic variations in the mammalian genome
    • Ekram MB, Kang K, Kim H, Kim J. 2012. Retrotransposons as a major source of epigenetic variations in the mammalian genome. Epigenetics 7:370-382. http://dx.doi.org/10.4161/epi.19462.
    • (2012) Epigenetics , vol.7 , pp. 370-382
    • Ekram, M.B.1    Kang, K.2    Kim, H.3    Kim, J.4
  • 76
    • 27744489220 scopus 로고    scopus 로고
    • Silencing and variegation of gammaretrovirus and lentivirus vectors
    • Ellis J. 2005. Silencing and variegation of gammaretrovirus and lentivirus vectors. Hum Gene Ther 16:1241-1246. http://dx.doi.org/10.1089/hum .2005.16.1241.
    • (2005) Hum Gene Ther , vol.16 , pp. 1241-1246
    • Ellis, J.1
  • 77
    • 33947373010 scopus 로고    scopus 로고
    • High-frequency epigenetic repression and silencing of retroviruses can be antagonized by histone deacetylase inhibitors and transcriptional activators, but uniform reactivation in cell clones is restricted by additional mechanisms
    • Katz R, Jack-Scott E, Narezkina A, Palagin I, Boimel P, Kulkosky J, Nicolas E, Greger J, Skalka A. 2007. High-frequency epigenetic repression and silencing of retroviruses can be antagonized by histone deacetylase inhibitors and transcriptional activators, but uniform reactivation in cell clones is restricted by additional mechanisms. J Virol 81:2592-2604. http://dx.doi.org/10.1128/JVI.01643-06.
    • (2007) J Virol , vol.81 , pp. 2592-2604
    • Katz, R.1    Jack-Scott, E.2    Narezkina, A.3    Palagin, I.4    Boimel, P.5    Kulkosky, J.6    Nicolas, E.7    Greger, J.8    Skalka, A.9
  • 78
    • 47949121965 scopus 로고    scopus 로고
    • Instability of retroviral DNA methylation in embryonic stem cells
    • Minoguchi S, Iba H. 2008. Instability of retroviral DNA methylation in embryonic stem cells. Stem Cells 26:1166-1173. http://dx.doi.org/10 .1634/stemcells.2007-1106.
    • (2008) Stem Cells , vol.26 , pp. 1166-1173
    • Minoguchi, S.1    Iba, H.2
  • 79
    • 84860990368 scopus 로고    scopus 로고
    • Rapid transcriptional pulsing dynamics of high expressing retroviral transgenes in embryonic stem cells
    • Lo MY, Rival-Gervier S, Pasceri P, Ellis J. 2012. Rapid transcriptional pulsing dynamics of high expressing retroviral transgenes in embryonic stem cells. PLoS One 7:e37130. http://dx.doi.org/10.1371/journal.pone .0037130.
    • (2012) PLoS One , vol.7
    • Lo, M.Y.1    Rival-Gervier, S.2    Pasceri, P.3    Ellis, J.4
  • 80
    • 84899977580 scopus 로고    scopus 로고
    • Asynchronous transcriptional silencing of individual retroviral genomes in embryonic cells
    • Schlesinger S, Meshorer E, Goff SP. 2014. Asynchronous transcriptional silencing of individual retroviral genomes in embryonic cells. Retrovirology 11:31. http://dx.doi.org/10.1186/1742-4690-11-31.
    • (2014) Retrovirology , vol.11 , pp. 31
    • Schlesinger, S.1    Meshorer, E.2    Goff, S.P.3
  • 82
    • 42149192008 scopus 로고    scopus 로고
    • Identification and characterization of subpopulations in undifferentiated ES cell culture
    • Toyooka Y, Shimosato D, Murakami K, Takahashi K, Niwa H. 2008. Identification and characterization of subpopulations in undifferentiated ES cell culture. Development 135:909-918. http://dx.doi.org/10.1242/dev .017400.
    • (2008) Development , vol.135 , pp. 909-918
    • Toyooka, Y.1    Shimosato, D.2    Murakami, K.3    Takahashi, K.4    Niwa, H.5
  • 83
    • 53049092465 scopus 로고    scopus 로고
    • Dynamic equilibrium and heterogeneity of mouse pluripotent stem cells with distinct functional and epigenetic states
    • Hayashi K, Lopes S, Tang F, Surani M. 2008. Dynamic equilibrium and heterogeneity of mouse pluripotent stem cells with distinct functional and epigenetic states. Cell Stem Cell 3:391-401. http://dx.doi.org/10.1016/j .stem.2008.07.027.
    • (2008) Cell Stem Cell , vol.3 , pp. 391-401
    • Hayashi, K.1    Lopes, S.2    Tang, F.3    Surani, M.4
  • 85
    • 33751189184 scopus 로고    scopus 로고
    • Transcriptional and post-transcriptional regulation of retrotransposons IAP and MuERV-L affect pluripotency of mice ES cells
    • Ramírez MA, Pericuesta E, Fernandez-Gonzalez R, Moreira P, Pintado B, Gutierrez-Adan A. 2006. Transcriptional and post-transcriptional regulation of retrotransposons IAP and MuERV-L affect pluripotency of mice ES cells. Reprod Biol Endocrinol 4:55. http://dx.doi.org/10.1186 /1477-7827-4-55.
    • (2006) Reprod Biol Endocrinol , vol.4 , pp. 55
    • Ramírez, M.A.1    Pericuesta, E.2    Fernandez-Gonzalez, R.3    Moreira, P.4    Pintado, B.5    Gutierrez-Adan, A.6
  • 86
    • 77956520011 scopus 로고    scopus 로고
    • Functional roles for noise in genetic circuits
    • Eldar A, Elowitz MB. 2010. Functional roles for noise in genetic circuits. Nature 467:167-173. http://dx.doi.org/10.1038/nature09326.
    • (2010) Nature , vol.467 , pp. 167-173
    • Eldar, A.1    Elowitz, M.B.2
  • 87
    • 78149484992 scopus 로고    scopus 로고
    • Tuning in to noise: epigenetics and intangible variation
    • Whitelaw NC, Chong S, Whitelaw E. 2010. Tuning in to noise: epigenetics and intangible variation. Dev Cell 19:649-650. http://dx.doi.org/10 .1016/j.devcel.2010.11.001.
    • (2010) Dev Cell , vol.19 , pp. 649-650
    • Whitelaw, N.C.1    Chong, S.2    Whitelaw, E.3
  • 88
  • 89
    • 58149500187 scopus 로고    scopus 로고
    • A transitional endogenous lentivirus from the genome of a basal primate and implications for lentivirus evolution
    • Gifford RJ, Katzourakis A, Tristem M, Pybus OG, Winters M, Shafer RW. 2008. A transitional endogenous lentivirus from the genome of a basal primate and implications for lentivirus evolution. Proc Natl Acad Sci U S A 105:20362-20367. http://dx.doi.org/10.1073/pnas.0807873105.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 20362-20367
    • Gifford, R.J.1    Katzourakis, A.2    Tristem, M.3    Pybus, O.G.4    Winters, M.5    Shafer, R.W.6
  • 90
    • 22744441386 scopus 로고    scopus 로고
    • Stochastic gene expression in a lentiviral positive-feedback loop: HIV-1 Tat fluctuations drive phenotypic diversity
    • Weinberger LS, Burnett JC, Toettcher JE, Arkin AP, Schaffer DV. 2005. Stochastic gene expression in a lentiviral positive-feedback loop: HIV-1 Tat fluctuations drive phenotypic diversity. Cell 122:169-182. http://dx .doi.org/10.1016/j.cell.2005.06.006.
    • (2005) Cell , vol.122 , pp. 169-182
    • Weinberger, L.S.1    Burnett, J.C.2    Toettcher, J.E.3    Arkin, A.P.4    Schaffer, D.V.5
  • 91
    • 84902665600 scopus 로고    scopus 로고
    • Screening for noise in gene expression identifies drug synergies
    • Dar RD, Hosmane NN, Arkin MR, Siliciano RF, Weinberger LS. 2014. Screening for noise in gene expression identifies drug synergies. Science 344:1392-1396. http://dx.doi.org/10.1126/science.1250220.
    • (2014) Science , vol.344 , pp. 1392-1396
    • Dar, R.D.1    Hosmane, N.N.2    Arkin, M.R.3    Siliciano, R.F.4    Weinberger, L.S.5
  • 92
    • 0035118229 scopus 로고    scopus 로고
    • Targeting histone deacetylase complexes via KRAB-zinc finger proteins: the PHD and bromodomains of KAP-1 form a cooperative unit that recruits a novel isoform of the Mi-2alpha subunit of NuRD
    • Schultz DC, Friedman JR, Rauscher FJ, III. 2001. Targeting histone deacetylase complexes via KRAB-zinc finger proteins: the PHD and bromodomains of KAP-1 form a cooperative unit that recruits a novel isoform of the Mi-2alpha subunit of NuRD. Genes Dev 15:428-443. http: //dx.doi.org/10.1101/gad.869501.
    • (2001) Genes Dev , vol.15 , pp. 428-443
    • Schultz, D.C.1    Friedman, J.R.2    Rauscher, F.J.3
  • 93
    • 84872088060 scopus 로고    scopus 로고
    • De novo DNA methylation of endogenous retroviruses is shaped by KRAB-ZFPs/KAP1 and ESET
    • Rowe HM, Friedli M, Offner S, Verp S, Mesnard D, Marquis J, Aktas T, Trono D. 2013. De novo DNA methylation of endogenous retroviruses is shaped by KRAB-ZFPs/KAP1 and ESET. Development 140:519-529. http://dx.doi.org/10.1242/dev.087585.
    • (2013) Development , vol.140 , pp. 519-529
    • Rowe, H.M.1    Friedli, M.2    Offner, S.3    Verp, S.4    Mesnard, D.5    Marquis, J.6    Aktas, T.7    Trono, D.8


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