-
1
-
-
84877077675
-
Quantitatively different, yet qualitatively alike: a meta-analysis of the mouse core gut microbiome with a view towards the human gut microbiome
-
23658749
-
L.Krych, C.H.F.Hansen, A.K.Hansen, F.W.J.van den Berg, D.S.Nielsen. Quantitatively different, yet qualitatively alike: a meta-analysis of the mouse core gut microbiome with a view towards the human gut microbiome. PLoS One 2013; 8(5):e62578; PMID:23658749; http://dx.doi.org/10.1371/journal.pone.0062578
-
(2013)
PLoS One
, vol.8
, Issue.5
, pp. e62578
-
-
Krych, L.1
Hansen, C.H.F.2
Hansen, A.K.3
van den Berg, F.W.J.4
Nielsen, D.S.5
-
2
-
-
84866146940
-
Diversity, stability and resilience of the human gut microbiota
-
22972295
-
C.A.Lozupone, J.I.Stombaugh, J.I.Gordon, J.K.Jansson, R.Knight. Diversity, stability and resilience of the human gut microbiota. Nature 2012; 489(7415):220-30; PMID:22972295; http://dx.doi.org/10.1038/nature11550
-
(2012)
Nature
, vol.489
, Issue.7415
, pp. 220-230
-
-
Lozupone, C.A.1
Stombaugh, J.I.2
Gordon, J.I.3
Jansson, J.K.4
Knight, R.5
-
3
-
-
70349233883
-
Towards the human intestinal microbiota phylogenetic core
-
19601958
-
J.Tap, S.Mondot, F.Levenez, E.Pelletier, C.Caron, J.P.Furet, E.Ugarte, R.Muñoz-Tamayo, D.L.Paslier, R.Nalin, et al. Towards the human intestinal microbiota phylogenetic core. Environ Microbiol 2009; 11(10):2574-84; PMID:19601958; http://dx.doi.org/10.1111/j.1462-2920.2009.01982.x
-
(2009)
Environ Microbiol
, vol.11
, Issue.10
, pp. 2574-2584
-
-
Tap, J.1
Mondot, S.2
Levenez, F.3
Pelletier, E.4
Caron, C.5
Furet, J.P.6
Ugarte, E.7
Muñoz-Tamayo, R.8
Paslier, D.L.9
Nalin, R.10
-
4
-
-
1542316379
-
Bacterial contributions to mammalian gut development
-
15001189
-
L.V.Hooper. Bacterial contributions to mammalian gut development. Trends Microbiol 2004; 12(3):129-34; PMID:15001189; http://dx.doi.org/10.1016/j.tim.2004.01.001
-
(2004)
Trends Microbiol
, vol.12
, Issue.3
, pp. 129-134
-
-
Hooper, L.V.1
-
5
-
-
84860587715
-
The intestinal flora is required to support antibody responses to systemic immunization in infant and germ free mice
-
Can't
-
E.S.Lamousé-Smith, A.Tzeng, M.N.Starnbach. The intestinal flora is required to support antibody responses to systemic immunization in infant and germ free mice. PLoS One 2011; 6(11):e27662; PMID:Can't; http://dx.doi.org/10.1371/journal.pone.0027662
-
(2011)
PLoS One
, vol.6
, Issue.11
, pp. e27662
-
-
Lamousé-Smith, E.S.1
Tzeng, A.2
Starnbach, M.N.3
-
6
-
-
41149099000
-
Symbiotic gut microbes modulate human metabolic phenotypes
-
18252821
-
M.Li, B.Wang, M.Zhang, M.Rantalainen, S.Wang, H.Zhou, Y.Zhang, J.Shen, X.Pang, M.Zhang, et al. Symbiotic gut microbes modulate human metabolic phenotypes. Proc Natl Acad Sci U S A 2008; 105(6):2117-22; PMID:18252821; http://dx.doi.org/10.1073/pnas.0712038105
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, Issue.6
, pp. 2117-2122
-
-
Li, M.1
Wang, B.2
Zhang, M.3
Rantalainen, M.4
Wang, S.5
Zhou, H.6
Zhang, Y.7
Shen, J.8
Pang, X.9
Zhang, M.10
-
7
-
-
53649106826
-
Antibiotic-induced perturbations of the intestinal microbiota alter host susceptibility to enteric infection
-
18678663
-
I.Sekirov, N.M.Tam, M.Jogova, M.L.Robertson, Y.Li, C.Lupp, B.B.Finlay. Antibiotic-induced perturbations of the intestinal microbiota alter host susceptibility to enteric infection. Infect Immun 2008; 76(10):4726-36; PMID:18678663; http://dx.doi.org/10.1128/IAI.00319-08
-
(2008)
Infect Immun
, vol.76
, Issue.10
, pp. 4726-4736
-
-
Sekirov, I.1
Tam, N.M.2
Jogova, M.3
Robertson, M.L.4
Li, Y.5
Lupp, C.6
Finlay, B.B.7
-
8
-
-
84973861100
-
Antibiotics promote inflammation through the translocation of native commensal colonic bacteria
-
26045138
-
K.A.Knoop, K.G.McDonald, D.H.Kulkarni, R.D.Newberry. Antibiotics promote inflammation through the translocation of native commensal colonic bacteria. Gut 2015; Jun 4:pii PMID:26045138; http://dx.doi.org/10.1136/gutjnl-2014-309059
-
(2015)
Gut
-
-
Knoop, K.A.1
McDonald, K.G.2
Kulkarni, D.H.3
Newberry, R.D.4
-
9
-
-
33845901507
-
Microbial ecology: human gut microbes associated with obesity
-
17183309
-
R.E.Ley, P.J.Turnbaugh, S.Klein, J.I.Gordon. Microbial ecology: human gut microbes associated with obesity. Nature 2006; 444(7122):1022-3; PMID:17183309; http://dx.doi.org/10.1038/4441022a
-
(2006)
Nature
, vol.444
, Issue.7122
, pp. 1022-1023
-
-
Ley, R.E.1
Turnbaugh, P.J.2
Klein, S.3
Gordon, J.I.4
-
10
-
-
84868336049
-
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease
-
23128233
-
L.Jostins, S.Ripke, R.K.Weersma, R.H.Duerr, D.P.McGovern, K.Y.Hui, J.C.Lee, L.P.Schumm, Y.Sharma, C.A.Anderson, et al. Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. Nature 2012; 491(7422):119-24; PMID:23128233; http://dx.doi.org/10.1038/nature11582
-
(2012)
Nature
, vol.491
, Issue.7422
, pp. 119-124
-
-
Jostins, L.1
Ripke, S.2
Weersma, R.K.3
Duerr, R.H.4
McGovern, D.P.5
Hui, K.Y.6
Lee, J.C.7
Schumm, L.P.8
Sharma, Y.9
Anderson, C.A.10
-
11
-
-
34248152283
-
Long-term ecological impacts of antibiotic administration on the human intestinal microbiota
-
18043614
-
C.Jernberg, S.Löfmark, C.Edlund, J.K.Jansson. Long-term ecological impacts of antibiotic administration on the human intestinal microbiota. ISME J 2007; 1(1):56-66; PMID:18043614; http://dx.doi.org/10.1038/ismej.2007.3
-
(2007)
ISME J
, vol.1
, Issue.1
, pp. 56-66
-
-
Jernberg, C.1
Löfmark, S.2
Edlund, C.3
Jansson, J.K.4
-
12
-
-
4444382949
-
Human intestinal bacteria as reservoirs for antibiotic resistance genes
-
15337162
-
A.A.Salyers, A.Gupta, Y.Wang. Human intestinal bacteria as reservoirs for antibiotic resistance genes. Trends Microbiol 2004; 12(9):412-6; PMID:15337162; http://dx.doi.org/10.1016/j.tim.2004.07.004
-
(2004)
Trends Microbiol
, vol.12
, Issue.9
, pp. 412-416
-
-
Salyers, A.A.1
Gupta, A.2
Wang, Y.3
-
13
-
-
80054960299
-
The Impact of a Consortium of Fermented Milk Strains on the Gut Microbiome of Gnotobiotic Mice and Monozygotic Twins
-
22030749
-
N.P.McNulty, T.Yatsunenko, A.Hsiao, J.J.Faith, B.D.Muegge, A.L.Goodman, B.Henrissat, R.Oozeer, S.Cools-Portier, G.Gobert, et al. The Impact of a Consortium of Fermented Milk Strains on the Gut Microbiome of Gnotobiotic Mice and Monozygotic Twins. Sci Transl Med 2011; 3(106):106ra106-106ra106; PMID:22030749; http://dx.doi.org/10.1126/scitranslmed.3002701
-
(2011)
Sci Transl Med
, vol.3
, Issue.106
, pp. 106ra106-106ra106
-
-
McNulty, N.P.1
Yatsunenko, T.2
Hsiao, A.3
Faith, J.J.4
Muegge, B.D.5
Goodman, A.L.6
Henrissat, B.7
Oozeer, R.8
Cools-Portier, S.9
Gobert, G.10
-
14
-
-
84868158515
-
Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice
-
23133377
-
T.D.Lawley, S.Clare, A.W.Walker, M.D.Stares, T.R.Connor, C.Raisen, D.Goulding, R.Rad, F.Schreiber, C.Brandt, et al. Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice. PLoS Pathog 2012; 8(10):e1002995; PMID:23133377; http://dx.doi.org/10.1371/journal.ppat.1002995
-
(2012)
PLoS Pathog
, vol.8
, Issue.10
, pp. e1002995
-
-
Lawley, T.D.1
Clare, S.2
Walker, A.W.3
Stares, M.D.4
Connor, T.R.5
Raisen, C.6
Goulding, D.7
Rad, R.8
Schreiber, F.9
Brandt, C.10
-
15
-
-
84860708876
-
Probiotics for the prevention and treatment of antibiotic-associated diarrhea: a systematic review and meta-analysis
-
22570464
-
S.Hempel, S.J.Newberry, A.R.Maher, Z.Wang, J.N.Miles, R.Shanman, B.Johnsen, P.G.Shekelle. Probiotics for the prevention and treatment of antibiotic-associated diarrhea: a systematic review and meta-analysis. JAMA 2012; 307(18):1959-69; PMID:22570464; http://dx.doi.org/10.1001/jama.2012.3507
-
(2012)
JAMA
, vol.307
, Issue.18
, pp. 1959-1969
-
-
Hempel, S.1
Newberry, S.J.2
Maher, A.R.3
Wang, Z.4
Miles, J.N.5
Shanman, R.6
Johnsen, B.7
Shekelle, P.G.8
-
16
-
-
80955180995
-
Intestinal microbiota in human health and disease: the impact of probiotics
-
21617937
-
J.Gerritsen, H.Smidt, G.T.Rijkers, W.M.de Vos. Intestinal microbiota in human health and disease: the impact of probiotics. Genes Nutr 2011; 6(3):209-40; PMID:21617937; http://dx.doi.org/10.1007/s12263-011-0229-7
-
(2011)
Genes Nutr
, vol.6
, Issue.3
, pp. 209-240
-
-
Gerritsen, J.1
Smidt, H.2
Rijkers, G.T.3
de Vos, W.M.4
-
17
-
-
78049522796
-
Long-term impacts of antibiotic exposure on the human intestinal microbiota
-
20705661
-
C.Jernberg, S.Löfmark, C.Edlund, J.K.Jansson. Long-term impacts of antibiotic exposure on the human intestinal microbiota. Microbiology 2010; 156(Pt 11):3216-23; PMID:20705661; http://dx.doi.org/10.1099/mic.0.040618-0
-
(2010)
Microbiology
, vol.156
, pp. 3216-3223
-
-
Jernberg, C.1
Löfmark, S.2
Edlund, C.3
Jansson, J.K.4
-
18
-
-
0036250036
-
Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia
-
11976113
-
P.H.Janssen, P.S.Yates, B.E.Grinton, P.M.Taylor, M.Sait. Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia. Appl Environ Microbiol 2002; 68(5):2391-6; PMID:11976113; http://dx.doi.org/10.1128/AEM.68.5.2391-2396.2002
-
(2002)
Appl Environ Microbiol
, vol.68
, Issue.5
, pp. 2391-2396
-
-
Janssen, P.H.1
Yates, P.S.2
Grinton, B.E.3
Taylor, P.M.4
Sait, M.5
-
19
-
-
79952005915
-
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
-
20534432
-
J.G.Caporaso, C.L.Lauber, W.A.Walters, D.Berg-Lyons, C.A.Lozupone, P.J.Turnbaugh, N.Fierer, R.Knight. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc Natl Acad Sci U S A 2011; 108 Suppl:4516-22; PMID:20534432; http://dx.doi.org/10.1073/pnas.1000080107
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 4516-4522
-
-
Caporaso, J.G.1
Lauber, C.L.2
Walters, W.A.3
Berg-Lyons, D.4
Lozupone, C.A.5
Turnbaugh, P.J.6
Fierer, N.7
Knight, R.8
-
20
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
20383131
-
J.G.Caporaso, J.Kuczynski, J.Stombaugh, K.Bittinger, F.D.Bushman, E.K.Costello, N.Fierer, A.G.Peña, J.K.Goodrich, J.I.Gordon, et al. QIIME allows analysis of high-throughput community sequencing data. Nat Methods 2010; 7(5):335-6; PMID:20383131; http://dx.doi.org/10.1038/nmeth.f.303
-
(2010)
Nat Methods
, vol.7
, Issue.5
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Peña, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
-
21
-
-
0345869650
-
Quantitative PCR with 16S rRNA-gene-targeted species-specific primers for analysis of human intestinal bifidobacteria
-
14711639
-
T.Matsuki, K.Watanabe, J.Fujimoto, Y.Kado, T.Takada, K.Matsumoto, R.Tanaka. Quantitative PCR with 16S rRNA-gene-targeted species-specific primers for analysis of human intestinal bifidobacteria. Appl Environ Microbiol 2004; 70(1):167-73; PMID:14711639; http://dx.doi.org/10.1128/AEM.70.1.167-173.2004
-
(2004)
Appl Environ Microbiol
, vol.70
, Issue.1
, pp. 167-173
-
-
Matsuki, T.1
Watanabe, K.2
Fujimoto, J.3
Kado, Y.4
Takada, T.5
Matsumoto, K.6
Tanaka, R.7
-
22
-
-
3142757134
-
Quantitative analysis of diverse Lactobacillus species present in advanced dental caries
-
15243071
-
R.Byun, M.A.Nadkarni, K.-L.Chhour, F.E.Martin, N.A.Jacques, N.Hunter. Quantitative analysis of diverse Lactobacillus species present in advanced dental caries. J Clin Microbiol 2004; 42(7):3128-36; PMID:15243071; http://dx.doi.org/10.1128/JCM.42.7.3128-3136.2004
-
(2004)
J Clin Microbiol
, vol.42
, Issue.7
, pp. 3128-3136
-
-
Byun, R.1
Nadkarni, M.A.2
Chhour, K.-L.3
Martin, F.E.4
Jacques, N.A.5
Hunter, N.6
-
23
-
-
79960648108
-
Improvement of phylum- and class-specific primers for real-time PCR quantification of bacterial taxa
-
21704084
-
T.Bacchetti De Gregoris, N.Aldred, A.S.Clare, J.G.Burgess. Improvement of phylum- and class-specific primers for real-time PCR quantification of bacterial taxa. J Microbiol Methods 2011; 86(3):351-6; PMID:21704084; http://dx.doi.org/10.1016/j.mimet.2011.06.010
-
(2011)
J Microbiol Methods
, vol.86
, Issue.3
, pp. 351-356
-
-
Bacchetti De Gregoris, T.1
Aldred, N.2
Clare, A.S.3
Burgess, J.G.4
-
24
-
-
84871441270
-
Hypothesis testing and power calculations for taxonomic-based human microbiome data
-
23284876
-
P.S.La Rosa, J.P.Brooks, E.Deych, E.L.Boone, D.J.Edwards, Q.Wang, E.Sodergren, G.Weinstock, W.D.Shannon. Hypothesis testing and power calculations for taxonomic-based human microbiome data. PLoS One 2012; 7(12):e52078; PMID:23284876; http://dx.doi.org/10.1371/journal.pone.0052078
-
(2012)
PLoS One
, vol.7
, Issue.12
, pp. e52078
-
-
La Rosa, P.S.1
Brooks, J.P.2
Deych, E.3
Boone, E.L.4
Edwards, D.J.5
Wang, Q.6
Sodergren, E.7
Weinstock, G.8
Shannon, W.D.9
-
25
-
-
84940868812
-
Antibiotic-induced alterations of the murine gut microbiota and subsequent effects on colonization resistance against clostridium difficile
-
26173701
-
A.M.Schubert, H.Sinani, P.D.Schloss. Antibiotic-induced alterations of the murine gut microbiota and subsequent effects on colonization resistance against clostridium difficile. MBio 2015; 6(4):e00974; PMID:26173701; http://dx.doi.org/10.1128/mBio.00974-15
-
(2015)
MBio
, vol.6
, Issue.4
, pp. e00974
-
-
Schubert, A.M.1
Sinani, H.2
Schloss, P.D.3
-
26
-
-
84886795788
-
Microbiota-mediated colonization resistance against intestinal pathogens
-
24096337
-
C.G.Buffie, E.G.Pamer. Microbiota-mediated colonization resistance against intestinal pathogens. Nat Rev Immunol 2013; 13(11):790-801; PMID:24096337; http://dx.doi.org/10.1038/nri3535
-
(2013)
Nat Rev Immunol
, vol.13
, Issue.11
, pp. 790-801
-
-
Buffie, C.G.1
Pamer, E.G.2
-
27
-
-
84857067037
-
Profound alterations of intestinal microbiota following a single dose of clindamycin results in sustained susceptibility to Clostridium difficile-induced colitis
-
22006564
-
C.G.Buffie, I.Jarchum, M.Equinda, L.Lipuma, A.Gobourne, A.Viale, C.Ubeda, J.Xavier, E.G.Pamer. Profound alterations of intestinal microbiota following a single dose of clindamycin results in sustained susceptibility to Clostridium difficile-induced colitis. Infect Immun 2012; 80(1):62-73; PMID:22006564; http://dx.doi.org/10.1128/IAI.05496-11
-
(2012)
Infect Immun
, vol.80
, Issue.1
, pp. 62-73
-
-
Buffie, C.G.1
Jarchum, I.2
Equinda, M.3
Lipuma, L.4
Gobourne, A.5
Viale, A.6
Ubeda, C.7
Xavier, J.8
Pamer, E.G.9
-
28
-
-
66549102207
-
Reproducible community dynamics of the gastrointestinal microbiota following antibiotic perturbation
-
19307217
-
D.A.Antonopoulos, S.M.Huse, H.G.Morrison, T.M.Schmidt, M.L.Sogin, V.B.Young. Reproducible community dynamics of the gastrointestinal microbiota following antibiotic perturbation. Infect Immun 2009; 77(6):2367-75; PMID:19307217; http://dx.doi.org/10.1128/IAI.01520-08
-
(2009)
Infect Immun
, vol.77
, Issue.6
, pp. 2367-2375
-
-
Antonopoulos, D.A.1
Huse, S.M.2
Morrison, H.G.3
Schmidt, T.M.4
Sogin, M.L.5
Young, V.B.6
-
29
-
-
33749509177
-
Accuracy of species identity of commercial bacterial cultures intended for probiotic or nutritional use
-
16919915
-
G.Huys, M.Vancanneyt, K.D'Haene, V.Vankerckhoven, H.Goossens, J.Swings. Accuracy of species identity of commercial bacterial cultures intended for probiotic or nutritional use. Res Microbiol 2006; 157(9):803-10; PMID:16919915; http://dx.doi.org/10.1016/j.resmic.2006.06.006
-
(2006)
Res Microbiol
, vol.157
, Issue.9
, pp. 803-810
-
-
Huys, G.1
Vancanneyt, M.2
D'Haene, K.3
Vankerckhoven, V.4
Goossens, H.5
Swings, J.6
-
30
-
-
21244451548
-
Culture-dependent and culture-independent qualitative analysis of probiotic products claimed to contain bifidobacteria
-
15992621
-
L.Masco, G.Huys, E.De Brandt, R.Temmerman, J.Swings. Culture-dependent and culture-independent qualitative analysis of probiotic products claimed to contain bifidobacteria. Int J Food Microbiol 2005; 102(2):221-30; PMID:15992621; http://dx.doi.org/10.1016/j.ijfoodmicro.2004.11.018
-
(2005)
Int J Food Microbiol
, vol.102
, Issue.2
, pp. 221-230
-
-
Masco, L.1
Huys, G.2
De Brandt, E.3
Temmerman, R.4
Swings, J.5
-
31
-
-
77957075815
-
Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
-
20679230
-
C.De Filippo, D.Cavalieri, M.Di Paola, M.Ramazzotti, J.B.Poullet, S.Massart, S.Collini, G.Pieraccini, P.Lionetti. Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proc Natl Acad Sci U S A 2010; 107(33):14691-6; PMID:20679230; http://dx.doi.org/10.1073/pnas.1005963107
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, Issue.33
, pp. 14691-14696
-
-
De Filippo, C.1
Cavalieri, D.2
Di Paola, M.3
Ramazzotti, M.4
Poullet, J.B.5
Massart, S.6
Collini, S.7
Pieraccini, G.8
Lionetti, P.9
-
32
-
-
84862637797
-
Gut immune maturation depends on colonization with a host-specific microbiota
-
22726443
-
H.Chung, S.J.Pamp, J.A.Hill, N.K.Surana, S.M.Edelman, E.B.Troy, N.C.Reading, E.J.Villablanca, S.Wang, J.R.Mora, et al. Gut immune maturation depends on colonization with a host-specific microbiota. Cell 2012; 149(7):1578-93; PMID:22726443; http://dx.doi.org/10.1016/j.cell.2012.04.037
-
(2012)
Cell
, vol.149
, Issue.7
, pp. 1578-1593
-
-
Chung, H.1
Pamp, S.J.2
Hill, J.A.3
Surana, N.K.4
Edelman, S.M.5
Troy, E.B.6
Reading, N.C.7
Villablanca, E.J.8
Wang, S.9
Mora, J.R.10
-
33
-
-
79955025122
-
Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice
-
21436049
-
A.L.Goodman, G.Kallstrom, J.J.Faith, A.Reyes, A.Moore, G.Dantas, J.I.Gordon. Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice. Proc Natl Acad Sci U S A 2011; 108(15):6252-7; PMID:21436049; http://dx.doi.org/10.1073/pnas.1102938108
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, Issue.15
, pp. 6252-6257
-
-
Goodman, A.L.1
Kallstrom, G.2
Faith, J.J.3
Reyes, A.4
Moore, A.5
Dantas, G.6
Gordon, J.I.7
-
34
-
-
58749112734
-
A core gut microbiome in obese and lean twins
-
19043404
-
P.J.Turnbaugh, M.Hamady, T.Yatsunenko, B.L.Cantarel, A.Duncan, R.E.Ley, M.L.Sogin, W.J.Jones, B.A.Roe, J.P.Affourtit, et al. A core gut microbiome in obese and lean twins. Nature 2009; 457(7228):480-4; PMID:19043404; http://dx.doi.org/10.1038/nature07540
-
(2009)
Nature
, vol.457
, Issue.7228
, pp. 480-484
-
-
Turnbaugh, P.J.1
Hamady, M.2
Yatsunenko, T.3
Cantarel, B.L.4
Duncan, A.5
Ley, R.E.6
Sogin, M.L.7
Jones, W.J.8
Roe, B.A.9
Affourtit, J.P.10
-
35
-
-
84883478660
-
Gut microbiota from twins discordant for obesity modulate metabolism in mice
-
24009397
-
V.K.Ridaura, J.J.Faith, F.E.Rey, J.Cheng, A.E.Duncan, A.L.Kau, N.W.Griffin, V.Lombard, B.Henrissat, J.R.Bain, et al. Gut microbiota from twins discordant for obesity modulate metabolism in mice. Science 2013; 341(6150):1241214; PMID:24009397; http://dx.doi.org/10.1126/science.1241214
-
(2013)
Science
, vol.341
, Issue.6150
, pp. 1241214
-
-
Ridaura, V.K.1
Faith, J.J.2
Rey, F.E.3
Cheng, J.4
Duncan, A.E.5
Kau, A.L.6
Griffin, N.W.7
Lombard, V.8
Henrissat, B.9
Bain, J.R.10
-
36
-
-
58149156205
-
The “Microflora Hypothesis” of allergic disease
-
18841708
-
A.Shreiner, G.B.Huffnagle, M.C.Noverr. The “Microflora Hypothesis” of allergic disease. Adv Exp Med Biol 2008; 635:113-4; PMID:18841708; http://dx.doi.org/10.1007/978-0-387-09550-9_10
-
(2008)
Adv Exp Med Biol
, vol.635
, pp. 113-114
-
-
Shreiner, A.1
Huffnagle, G.B.2
Noverr, M.C.3
-
37
-
-
84922971911
-
Dynamics and establishment of Clostridium difficile infection in the murine gastrointestinal tract
-
25534943
-
M.J.Koenigsknecht, C.M.Theriot, I.L.Bergin, C.A.Schumacher, P.D.Schloss, V.B.Young. Dynamics and establishment of Clostridium difficile infection in the murine gastrointestinal tract. Infect Immun 2015; 83(3):934-41; PMID:25534943; http://dx.doi.org/10.1128/IAI.02768-14
-
(2015)
Infect Immun
, vol.83
, Issue.3
, pp. 934-941
-
-
Koenigsknecht, M.J.1
Theriot, C.M.2
Bergin, I.L.3
Schumacher, C.A.4
Schloss, P.D.5
Young, V.B.6
-
38
-
-
84881614224
-
Replenishing our defensive microbes
-
23836415
-
L.K.Ursell, W.Van Treuren, J.L.Metcalf, M.Pirrung, A.Gewirtz, R.Knight. Replenishing our defensive microbes. Bioessays 2013; 35(9):810-7; PMID:23836415; http://dx.doi.org/10.1002/bies.201300018
-
(2013)
Bioessays
, vol.35
, Issue.9
, pp. 810-817
-
-
Ursell, L.K.1
Van Treuren, W.2
Metcalf, J.L.3
Pirrung, M.4
Gewirtz, A.5
Knight, R.6
-
39
-
-
84873019302
-
Duodenal infusion of donor feces for recurrent Clostridium difficile
-
23323867
-
E.Van Nood, A.Vrieze, M.Nieuwdorp, S.Fuentes, E.G.Zoetendal, W.M.de Vos, C.E.Visser, E.J.Kuijper, J.F.Bartelsman, J.G.Tijssen, et al. Duodenal infusion of donor feces for recurrent Clostridium difficile. N Engl J Med 2013; 368(5):407-15; PMID:23323867; http://dx.doi.org/10.1056/NEJMoa1205037
-
(2013)
N Engl J Med
, vol.368
, Issue.5
, pp. 407-415
-
-
Van Nood, E.1
Vrieze, A.2
Nieuwdorp, M.3
Fuentes, S.4
Zoetendal, E.G.5
de Vos, W.M.6
Visser, C.E.7
Kuijper, E.J.8
Bartelsman, J.F.9
Tijssen, J.G.10
-
40
-
-
33645455337
-
Meta-analysis of probiotics for the prevention of antibiotic associated diarrhea and the treatment of Clostridium difficile disease
-
16635227
-
L.V.McFarland. Meta-analysis of probiotics for the prevention of antibiotic associated diarrhea and the treatment of Clostridium difficile disease. Am J Gastroenterol 2006; 101(4):812-22; PMID:16635227; http://dx.doi.org/10.1111/j.1572-0241.2006.00465.x
-
(2006)
Am J Gastroenterol
, vol.101
, Issue.4
, pp. 812-822
-
-
McFarland, L.V.1
-
41
-
-
0032954214
-
Persistence of colonization of human colonic mucosa by a probiotic strain, Lactobacillus rhamnosus GG, after oral consumption
-
9872808
-
M.Alander, R.Satokari, R.Korpela, M.Saxelin, T.Vilpponen-Salmela, T.Mattila-Sandholm, A.von Wright. Persistence of colonization of human colonic mucosa by a probiotic strain, Lactobacillus rhamnosus GG, after oral consumption. Appl Environ Microbiol 1999; 65(1):351-4; PMID:9872808
-
(1999)
Appl Environ Microbiol
, vol.65
, Issue.1
, pp. 351-354
-
-
Alander, M.1
Satokari, R.2
Korpela, R.3
Saxelin, M.4
Vilpponen-Salmela, T.5
Mattila-Sandholm, T.6
von Wright, A.7
-
42
-
-
2342625255
-
Permanent colonization by Lactobacillus casei is hindered by the low rate of cell division in mouse gut
-
14766540
-
Y.K.Lee, P.S.Ho, C.S.Low, H.Arvilommi, S.Salminen. Permanent colonization by Lactobacillus casei is hindered by the low rate of cell division in mouse gut. Appl Environ Microbiol 2004; 70(2):670-4; PMID:14766540; http://dx.doi.org/10.1128/AEM.70.2.670-674.2004
-
(2004)
Appl Environ Microbiol
, vol.70
, Issue.2
, pp. 670-674
-
-
Lee, Y.K.1
Ho, P.S.2
Low, C.S.3
Arvilommi, H.4
Salminen, S.5
-
43
-
-
84928778601
-
Functional dynamics of the gut microbiome in elderly people during probiotic consumption
-
25873374
-
E.A.Eloe-Fadrosh, A.Brady, J.Crabtree, E.F.Drabek, B.Ma, A.Mahurkar, J.Ravel, M.Haverkamp, A.M.Fiorino, C.Botelho, et al. Functional dynamics of the gut microbiome in elderly people during probiotic consumption. MBio 2015; 6(2):pii: e00231-15; PMID:25873374; http://dx.doi.org/10.1128/mBio.00231-15
-
(2015)
MBio
, vol.6
, Issue.2
-
-
Eloe-Fadrosh, E.A.1
Brady, A.2
Crabtree, J.3
Drabek, E.F.4
Ma, B.5
Mahurkar, A.6
Ravel, J.7
Haverkamp, M.8
Fiorino, A.M.9
Botelho, C.10
-
44
-
-
84877116806
-
Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data
-
23638368
-
L.Lahti, A.Salonen, R.A.Kekkonen, J.Salojärvi, J.Jalanka-Tuovinen, A.Palva, M.Orešič, W.M.de Vos. Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data. PeerJ 2013; 1:e32; PMID:23638368; http://dx.doi.org/10.7717/peerj.32
-
(2013)
PeerJ
, vol.1
, pp. e32
-
-
Lahti, L.1
Salonen, A.2
Kekkonen, R.A.3
Salojärvi, J.4
Jalanka-Tuovinen, J.5
Palva, A.6
Orešič, M.7
de Vos, W.M.8
-
45
-
-
77958585765
-
Regulatory oversight and safety of probiotic use
-
21029521
-
V.Venugopalan, K.A.Shriner, A.Wong-Beringer. Regulatory oversight and safety of probiotic use. Emerg Infect Dis 2010; 16(11):1661-5; PMID:21029521; http://dx.doi.org/10.3201/eid1611.100574
-
(2010)
Emerg Infect Dis
, vol.16
, Issue.11
, pp. 1661-1665
-
-
Venugopalan, V.1
Shriner, K.A.2
Wong-Beringer, A.3
-
46
-
-
77954820449
-
Safety assessment of probiotics for human use
-
21327023
-
M.E.Sanders, L.M.A.Akkermans, D.Haller, C.Hammerman, J.Heimbach, G.Hörmannsperger, G.Huys, D.D.Levy, F.Lutgendorff, D.Mack, et al. Safety assessment of probiotics for human use. Gut Microbes 1(3):164-85; PMID:21327023; http://dx.doi.org/10.4161/gmic.1.3.12127
-
Gut Microbes
, vol.1
, Issue.3
, pp. 164-185
-
-
Sanders, M.E.1
Akkermans, L.M.A.2
Haller, D.3
Hammerman, C.4
Heimbach, J.5
Hörmannsperger, G.6
Huys, G.7
Levy, D.D.8
Lutgendorff, F.9
Mack, D.10
-
47
-
-
16844386480
-
Lactobacillus sepsis associated with probiotic therapy
-
15629999
-
M.H.Land, K.Rouster-Stevens, C.R.Woods, M.L.Cannon, J.Cnota, A.K.Shetty. Lactobacillus sepsis associated with probiotic therapy. Pediatrics 2005; 115(1):178-81; PMID:15629999
-
(2005)
Pediatrics
, vol.115
, Issue.1
, pp. 178-181
-
-
Land, M.H.1
Rouster-Stevens, K.2
Woods, C.R.3
Cannon, M.L.4
Cnota, J.5
Shetty, A.K.6
-
48
-
-
0032954103
-
Liver abscess due to a Lactobacillus rhamnosus strain indistinguishable from L. rhamnosus strain GG
-
10452653
-
M.Rautio, H.Jousimies-Somer, H.Kauma, I.Pietarinen, M.Saxelin, S.Tynkkynen, M.Koskela. Liver abscess due to a Lactobacillus rhamnosus strain indistinguishable from L. rhamnosus strain GG. Clin Infect Dis 1999; 28(5):1159-60; PMID:10452653; http://dx.doi.org/10.1086/514766
-
(1999)
Clin Infect Dis
, vol.28
, Issue.5
, pp. 1159-1160
-
-
Rautio, M.1
Jousimies-Somer, H.2
Kauma, H.3
Pietarinen, I.4
Saxelin, M.5
Tynkkynen, S.6
Koskela, M.7
-
49
-
-
84905263674
-
Probiotic-associated aspiration pneumonia due to Lactobacillus rhamnosus
-
24899028
-
C.D.Doern, S.T.Nguyen, F.Afolabi, C.-A.D.Burnham. Probiotic-associated aspiration pneumonia due to Lactobacillus rhamnosus. J Clin Microbiol 2014; 52(8):3124-6; PMID:24899028; http://dx.doi.org/10.1128/JCM.01065-14
-
(2014)
J Clin Microbiol
, vol.52
, Issue.8
, pp. 3124-3126
-
-
Doern, C.D.1
Nguyen, S.T.2
Afolabi, F.3
Burnham, C.-A.D.4
-
50
-
-
84855650410
-
Stenotrophomonas maltophilia: an Emerging Global Opportunistic Pathogen
-
22232370
-
J.S.Brooke. Stenotrophomonas maltophilia: an Emerging Global Opportunistic Pathogen. Clin Microbiol Rev 2012; 25(1):2-41; PMID:22232370; http://dx.doi.org/10.1128/CMR.00019-11
-
(2012)
Clin Microbiol Rev
, vol.25
, Issue.1
, pp. 2-41
-
-
Brooke, J.S.1
-
51
-
-
64849096857
-
Stenotrophomonas maltophilia: an emerging opportunist human pathogen
-
19393961
-
W.J.Looney, M.Narita, K.Mühlemann. Stenotrophomonas maltophilia: an emerging opportunist human pathogen. Lancet Infect Dis 2009; 9(5):312-23; PMID:19393961; http://dx.doi.org/10.1016/S1473-3099(09)70083-0
-
(2009)
Lancet Infect Dis
, vol.9
, Issue.5
, pp. 312-323
-
-
Looney, W.J.1
Narita, M.2
Mühlemann, K.3
-
52
-
-
84882928602
-
Chronic Stenotrophomonas maltophilia infection and mortality or lung transplantation in cystic fibrosis patients
-
23294530
-
V.Waters, E.G.Atenafu, A.Lu, Y.Yau, E.Tullis, F.Ratjen. Chronic Stenotrophomonas maltophilia infection and mortality or lung transplantation in cystic fibrosis patients. J Cyst Fibros 2013; 12(5):482-6; PMID:23294530; http://dx.doi.org/10.1016/j.jcf.2012.12.006
-
(2013)
J Cyst Fibros
, vol.12
, Issue.5
, pp. 482-486
-
-
Waters, V.1
Atenafu, E.G.2
Lu, A.3
Yau, Y.4
Tullis, E.5
Ratjen, F.6
-
53
-
-
33745924162
-
Bacteraemia caused by Anaerotruncus colihominis and emended description of the species
-
16467163
-
S.K.P.Lau, P.C.Y.Woo, G.K.S.Woo, A.M.Fung, A.H.Ngan, Y.Song, C.Liu, P.Summanen, S.M.Finegold, K.Yuen. Bacteraemia caused by Anaerotruncus colihominis and emended description of the species. J Clin Pathol 2006; 59(7):748-52; PMID:16467163; http://dx.doi.org/10.1136/jcp.2005.031773
-
(2006)
J Clin Pathol
, vol.59
, Issue.7
, pp. 748-752
-
-
Lau, S.K.P.1
Woo, P.C.Y.2
Woo, G.K.S.3
Fung, A.M.4
Ngan, A.H.5
Song, Y.6
Liu, C.7
Summanen, P.8
Finegold, S.M.9
Yuen, K.10
-
54
-
-
1842475030
-
Anaerotruncus colihominis gen. nov., sp. nov., from human faeces
-
15023953
-
P.A.Lawson, Y.Song, C.Liu, D.R.Molitoris, M.L.Vaisanen, M.D.Collins, S.M.Finegold. Anaerotruncus colihominis gen. nov., sp. nov., from human faeces. Int J Syst Evol Microbiol 2004; 54(Pt 2):413-7; PMID:15023953; http://dx.doi.org/10.1099/ijs.0.02653-0
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 413-417
-
-
Lawson, P.A.1
Song, Y.2
Liu, C.3
Molitoris, D.R.4
Vaisanen, M.L.5
Collins, M.D.6
Finegold, S.M.7
-
55
-
-
84881477044
-
Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota
-
23842501
-
K.Atarashi, T.Tanoue, K.Oshima, W.Suda, Y.Nagano, H.Nishikawa, S.Fukuda, T.Saito, S.Narushima, K.Hase, et al. Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota. Nature 2013; 500(7461):232-6; PMID:23842501; http://dx.doi.org/10.1038/nature12331
-
(2013)
Nature
, vol.500
, Issue.7461
, pp. 232-236
-
-
Atarashi, K.1
Tanoue, T.2
Oshima, K.3
Suda, W.4
Nagano, Y.5
Nishikawa, H.6
Fukuda, S.7
Saito, T.8
Narushima, S.9
Hase, K.10
-
56
-
-
85028608351
-
Fecal transplantation treatment of antibiotic-induced, noninfectious colitis and long-term microbiota follow-up
-
25548572
-
R.Satokari, S.Fuentes, E.Mattila, J.Jalanka, W.M.de Vos, P.Arkkila. Fecal transplantation treatment of antibiotic-induced, noninfectious colitis and long-term microbiota follow-up. Case Rep Med 2014; 2014:913867; PMID:25548572
-
(2014)
Case Rep Med
, vol.2014
, pp. 913867
-
-
Satokari, R.1
Fuentes, S.2
Mattila, E.3
Jalanka, J.4
de Vos, W.M.5
Arkkila, P.6
-
57
-
-
78149270683
-
Intragastric administration of a superoxide dismutase-producing recombinant Lactobacillus casei BL23 strain attenuates DSS colitis in mice
-
20452077
-
L.Watterlot, T.Rochat, H.Sokol, C.Cherbuy, I.Bouloufa, F.Lefèvre, J.J.Gratadoux, E.Honvo-Hueto, S.Chilmonczyk, S.Blugeon, et al. Intragastric administration of a superoxide dismutase-producing recombinant Lactobacillus casei BL23 strain attenuates DSS colitis in mice. Int J Food Microbiol 2010; 144(1):35-41; PMID:20452077; http://dx.doi.org/10.1016/j.ijfoodmicro.2010.03.037
-
(2010)
Int J Food Microbiol
, vol.144
, Issue.1
, pp. 35-41
-
-
Watterlot, L.1
Rochat, T.2
Sokol, H.3
Cherbuy, C.4
Bouloufa, I.5
Lefèvre, F.6
Gratadoux, J.J.7
Honvo-Hueto, E.8
Chilmonczyk, S.9
Blugeon, S.10
-
58
-
-
84934933158
-
Host lysozyme-mediated lysis of Lactococcus lactis facilitates delivery of colitis-attenuating superoxide dismutase to inflamed colons
-
26056274
-
S.A.Ballal, P.Veiga, K.Fenn, M.Michaud, J.H.Kim, C.A.Gallini, J.N.Glickman, G.Quéré, P.Garault, C.Béal, et al. Host lysozyme-mediated lysis of Lactococcus lactis facilitates delivery of colitis-attenuating superoxide dismutase to inflamed colons. Proc Natl Acad Sci U S A 2015; 112(25):7803-8; PMID:26056274; http://dx.doi.org/10.1073/pnas.1501897112
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, Issue.25
, pp. 7803-7808
-
-
Ballal, S.A.1
Veiga, P.2
Fenn, K.3
Michaud, M.4
Kim, J.H.5
Gallini, C.A.6
Glickman, J.N.7
Quéré, G.8
Garault, P.9
Béal, C.10
-
59
-
-
78149262230
-
Bifidobacterium animalis subsp. lactis fermented milk product reduces inflammation by altering a niche for colitogenic microbes
-
20921388
-
P.Veiga, C.A.Gallini, C.Beal, M.Michaud, M.L.Delaney, A.DuBois, A.Khlebnikov, J.E.van Hylckama Vlieg, S.Punit, J.N.Glickman, et al. Bifidobacterium animalis subsp. lactis fermented milk product reduces inflammation by altering a niche for colitogenic microbes. Proc Natl Acad Sci U S A 2010; 107(42):18132-7; PMID:20921388; http://dx.doi.org/10.1073/pnas.1011737107
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, Issue.42
, pp. 18132-18137
-
-
Veiga, P.1
Gallini, C.A.2
Beal, C.3
Michaud, M.4
Delaney, M.L.5
DuBois, A.6
Khlebnikov, A.7
van Hylckama Vlieg, J.E.8
Punit, S.9
Glickman, J.N.10
|