-
1
-
-
24144451315
-
Changing patterns and trends in systemic fungal infections
-
Richardson, M. D. Changing patterns and trends in systemic fungal infections. J Antimicrob Chemother 56 Suppl 1, i5-i11 (2005).
-
(2005)
J Antimicrob Chemother 56 Suppl
, vol.1
, pp. i5-i11
-
-
Richardson, M.D.1
-
2
-
-
33749986341
-
Candida biofilms on implanted biomaterials: A clinically significant problem
-
Ramage, G., Martinez, J. P., Lopez-Ribot, J. L. Candida biofilms on implanted biomaterials: a clinically significant problem. FEMS Yeast Res 6, 979-86 (2006).
-
(2006)
FEMS Yeast Res
, vol.6
, pp. 979-986
-
-
Ramage, G.1
Martinez, J.P.2
Lopez-Ribot, J.L.3
-
3
-
-
0036840519
-
In vitro activity of caspofungin against Candida albicans biofilms
-
Bachmann, S. P. et al. In vitro activity of caspofungin against Candida albicans biofilms. Antimicrob Agents Chemother 46, 3591-6 (2002).
-
(2002)
Antimicrob Agents Chemother
, vol.46
, pp. 3591-3596
-
-
Bachmann, S.P.1
-
4
-
-
0036096359
-
Antifungal susceptibility of Candida biofilms: Unique efficacy of amphotericin B lipid formulations and echinocandins
-
Kuhn, D. M., George, T., Chandra, J., Mukherjee, P. K., Ghannoum, M. A. Antifungal susceptibility of Candida biofilms: unique efficacy of amphotericin B lipid formulations and echinocandins. Antimicrob Agents Chemother 46, 1773-80 (2002).
-
(2002)
Antimicrob Agents Chemother
, vol.46
, pp. 1773-1780
-
-
Kuhn, D.M.1
George, T.2
Chandra, J.3
Mukherjee, P.K.4
Ghannoum, M.A.5
-
5
-
-
84875503043
-
It only takes one to do many jobs: Amphotericin B as antifungal and immunomodulatory drug
-
Mesa-Arango, A. C., Scorzoni, L., Zaragoza, O. It only takes one to do many jobs: Amphotericin B as antifungal and immunomodulatory drug. Front Microbiol 3, 286 (2012).
-
(2012)
Front Microbiol
, vol.3
, pp. 286
-
-
Mesa-Arango, A.C.1
Scorzoni, L.2
Zaragoza, O.3
-
6
-
-
84907123977
-
The lipid composition and permeability to azole of an azole-and polyene-resistant mutant of Candida albicans
-
Hitchcock, C. A., Barrett-Bee, K. J., Russell, N. J. The lipid composition and permeability to azole of an azole-and polyene-resistant mutant of Candida albicans. J Med Vet Mycol 25, 29-37 (1987).
-
(1987)
J Med Vet Mycol
, vol.25
, pp. 29-37
-
-
Hitchcock, C.A.1
Barrett-Bee, K.J.2
Russell, N.J.3
-
7
-
-
33846579562
-
Putative role of beta-1,3 glucans in Candida albicans biofilm resistance
-
Nett, J. et al. Putative role of beta-1,3 glucans in Candida albicans biofilm resistance. Antimicrob Agents Chemother 51, 510-20 (2007).
-
(2007)
Antimicrob Agents Chemother
, vol.51
, pp. 510-520
-
-
Nett, J.1
-
8
-
-
77955355113
-
Role of Fks1p and matrix glucan in Candida albicans biofilm resistance to an echinocandin, pyrimidine, and polyene
-
Nett, J. E., Crawford, K., Marchillo, K., Andes, D. R. Role of Fks1p and matrix glucan in Candida albicans biofilm resistance to an echinocandin, pyrimidine, and polyene. Antimicrob Agents Chemother 54, 3505-8 (2010).
-
(2010)
Antimicrob Agents Chemother
, vol.54
, pp. 3505-3508
-
-
Nett, J.E.1
Crawford, K.2
Marchillo, K.3
Andes, D.R.4
-
9
-
-
83655192068
-
Addition of DNase improves the in vitro activity of antifungal drugs against Candida albicans biofilms
-
Martins, M., Henriques, M., Lopez-Ribot, J. L., Oliveira, R. Addition of DNase improves the in vitro activity of antifungal drugs against Candida albicans biofilms. Mycoses 55, 80-5 (2012).
-
(2012)
Mycoses
, vol.55
, pp. 80-85
-
-
Martins, M.1
Henriques, M.2
Lopez-Ribot, J.L.3
Oliveira, R.4
-
10
-
-
0041764578
-
Mechanism of fluconazole resistance in Candida albicans biofilms: Phase-specific role of efflux pumps and membrane sterols
-
Mukherjee, P. K., Chandra, J., Kuhn, D. M., Ghannoum, M. A. Mechanism of fluconazole resistance in Candida albicans biofilms: phase-specific role of efflux pumps and membrane sterols. Infect Immun 71, 4333-40 (2003).
-
(2003)
Infect Immun
, vol.71
, pp. 4333-4340
-
-
Mukherjee, P.K.1
Chandra, J.2
Kuhn, D.M.3
Ghannoum, M.A.4
-
11
-
-
33750590848
-
A small subpopulation of blastospores in candida albicans biofilms exhibit resistance to amphotericin B associated with differential regulation of ergosterol and beta-1,6-glucan pathway genes
-
Khot, P. D., Suci, P. A., Miller, R. L., Nelson, R. D., Tyler, B. J. A small subpopulation of blastospores in candida albicans biofilms exhibit resistance to amphotericin B associated with differential regulation of ergosterol and beta-1,6-glucan pathway genes. Antimicrob Agents Chemother 50, 3708-16 (2006).
-
(2006)
Antimicrob Agents Chemother
, vol.50
, pp. 3708-3716
-
-
Khot, P.D.1
Suci, P.A.2
Miller, R.L.3
Nelson, R.D.4
Tyler, B.J.5
-
12
-
-
33750596264
-
Candida albicans biofilms produce antifungal-tolerant persister cells
-
LaFleur, M. D., Kumamoto, C. A., Lewis, K. Candida albicans biofilms produce antifungal-tolerant persister cells. Antimicrob Agents Chemother 50, 3839-46 (2006).
-
(2006)
Antimicrob Agents Chemother
, vol.50
, pp. 3839-3846
-
-
LaFleur, M.D.1
Kumamoto, C.A.2
Lewis, K.3
-
13
-
-
77955628762
-
Persister cells
-
Lewis, K. Persister cells. Annu Rev Microbiol 64, 357-72 (2010).
-
(2010)
Annu Rev Microbiol
, vol.64
, pp. 357-372
-
-
Lewis, K.1
-
14
-
-
76049117463
-
Apoptosis in Candida biofilms exposed to amphotericin B
-
Al-Dhaheri, R. S., Douglas, L. J. Apoptosis in Candida biofilms exposed to amphotericin B. J Med Microbiol 59, 149-57 (2010).
-
(2010)
J Med Microbiol
, vol.59
, pp. 149-157
-
-
Al-Dhaheri, R.S.1
Douglas, L.J.2
-
15
-
-
80051804445
-
Superoxide dismutases are involved in Candida albicans biofilm persistence against miconazole
-
Bink, A. et al. Superoxide dismutases are involved in Candida albicans biofilm persistence against miconazole. Antimicrob Agents Chemother 55, 4033-7 (2011).
-
(2011)
Antimicrob Agents Chemother
, vol.55
, pp. 4033-4037
-
-
Bink, A.1
-
17
-
-
84924147113
-
Saccharomyces cerevisiae biofilm tolerance towards systemic antifungals depends on growth phase
-
Bojsen, R., Regenberg, B., Folkesson, A. Saccharomyces cerevisiae biofilm tolerance towards systemic antifungals depends on growth phase. BMC Microbiol 14, 305 (2014).
-
(2014)
BMC Microbiol
, vol.14
, pp. 305
-
-
Bojsen, R.1
Regenberg, B.2
Folkesson, A.3
-
18
-
-
0035173818
-
Biofilms and planktonic cells of Pseudomonas aeruginosa have similar resistance to killing by antimicrobials
-
Spoering, A. L., Lewis, K. Biofilms and planktonic cells of Pseudomonas aeruginosa have similar resistance to killing by antimicrobials. J Bacteriol 183, 6746-51 (2001).
-
(2001)
J Bacteriol
, vol.183
, pp. 6746-6751
-
-
Spoering, A.L.1
Lewis, K.2
-
19
-
-
0037378920
-
Role of nutrient limitation and stationary-phase existence in Klebsiella pneumoniae biofilm resistance to ampicillin and ciprofloxacin
-
Anderl, J. N., Zahller, J., Roe, F., Stewart, P. S. Role of nutrient limitation and stationary-phase existence in Klebsiella pneumoniae biofilm resistance to ampicillin and ciprofloxacin. Antimicrob Agents Chemother 47, 1251-6 (2003).
-
(2003)
Antimicrob Agents Chemother
, vol.47
, pp. 1251-1256
-
-
Anderl, J.N.1
Zahller, J.2
Roe, F.3
Stewart, P.S.4
-
20
-
-
0035793383
-
Bakers' yeast, a model for fungal biofilm formation
-
Reynolds, T. B., Fink, G. R. Bakers' yeast, a model for fungal biofilm formation. Science 291, 878-81 (2001).
-
(2001)
Science
, vol.291
, pp. 878-881
-
-
Reynolds, T.B.1
Fink, G.R.2
-
21
-
-
84866124383
-
Global gene deletion analysis exploring yeast filamentous growth
-
Ryan, O. et al. Global gene deletion analysis exploring yeast filamentous growth. Science 337, 1353-6 (2012).
-
(2012)
Science
, vol.337
, pp. 1353-1356
-
-
Ryan, O.1
-
22
-
-
84887606590
-
Genomewide screening for genes involved in biofilm formation and miconazole susceptibility in Saccharomyces cerevisiae
-
Vandenbosch, D. et al. Genomewide screening for genes involved in biofilm formation and miconazole susceptibility in Saccharomyces cerevisiae. FEMS Yeast Res 13, 720-30 (2013).
-
(2013)
FEMS Yeast Res
, vol.13
, pp. 720-730
-
-
Vandenbosch, D.1
-
23
-
-
0037173615
-
Functional profiling of the Saccharomyces cerevisiae genome
-
Giaever, G. et al. Functional profiling of the Saccharomyces cerevisiae genome. Nature 418, 387-91 (2002).
-
(2002)
Nature
, vol.418
, pp. 387-391
-
-
Giaever, G.1
-
24
-
-
84907914671
-
Genetic basis for saccharomyces cerevisiae biofilm in liquid medium
-
Andersen, K. S. et al. Genetic Basis for Saccharomyces cerevisiae Biofilm in Liquid Medium. G3 (Bethesda) 4, 1671-1680 (2014).
-
(2014)
G3 (Bethesda)
, vol.4
, pp. 1671-1680
-
-
Andersen, K.S.1
-
25
-
-
70349634435
-
Quantitative phenotyping via deep barcode sequencing
-
Smith, A. M. et al. Quantitative phenotyping via deep barcode sequencing. Genome Res 19, 1836-42 (2009).
-
(2009)
Genome Res
, vol.19
, pp. 1836-1842
-
-
Smith, A.M.1
-
26
-
-
84892705629
-
Design and analysis of Bar-seq experiments
-
Robinson, D. G., Chen, W., Storey, J. D., Gresham, D. Design and analysis of Bar-seq experiments. G3 (Bethesda) 4, 11-8 (2014).
-
(2014)
G3 (Bethesda)
, vol.4
, pp. 11-18
-
-
Robinson, D.G.1
Chen, W.2
Storey, J.D.3
Gresham, D.4
-
27
-
-
75249087100
-
EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
-
Robinson, M. D., McCarthy, D. J., Smyth, G. K. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26, 139-40 (2010).
-
(2010)
Bioinformatics
, vol.26
, pp. 139-140
-
-
Robinson, M.D.1
McCarthy, D.J.2
Smyth, G.K.3
-
28
-
-
84858588614
-
Saccharomyces Genome Database: The genomics resource of budding yeast
-
Cherry, J. M. et al. Saccharomyces Genome Database: the genomics resource of budding yeast. Nucleic Acids Res 40, D700-5 (2012).
-
(2012)
Nucleic Acids Res
, vol.40
, pp. D700-D705
-
-
Cherry, J.M.1
-
29
-
-
77956101405
-
A clinical isolate of Candida albicans with mutations in ERG11 (encoding sterol 14alpha-demethylase) and ERG5 (encoding C22 desaturase) is cross resistant to azoles and amphotericin B
-
Martel, C. M. et al. A clinical isolate of Candida albicans with mutations in ERG11 (encoding sterol 14alpha-demethylase) and ERG5 (encoding C22 desaturase) is cross resistant to azoles and amphotericin B. Antimicrob Agents Chemother 54, 3578-83 (2010).
-
(2010)
Antimicrob Agents Chemother
, vol.54
, pp. 3578-3583
-
-
Martel, C.M.1
-
30
-
-
0033501047
-
The elm1 kinase functions in a mitotic signaling network in budding yeast
-
Sreenivasan, A., Kellogg, D. The elm1 kinase functions in a mitotic signaling network in budding yeast. Mol Cell Biol 19, 7983-94 (1999).
-
(1999)
Mol Cell Biol
, vol.19
, pp. 7983-7994
-
-
Sreenivasan, A.1
Kellogg, D.2
-
31
-
-
83455177213
-
Target of rapamycin (TOR) in nutrient signaling and growth control
-
Loewith, R., Hall, M. N. Target of rapamycin (TOR) in nutrient signaling and growth control. Genetics 189, 1177-201 (2011).
-
(2011)
Genetics
, vol.189
, pp. 1177-1201
-
-
Loewith, R.1
Hall, M.N.2
-
32
-
-
21244448694
-
The TOR and EGO protein complexes orchestrate microautophagy in yeast
-
Dubouloz, F., Deloche, O., Wanke, V., Cameroni, E., De Virgilio, C. The TOR and EGO protein complexes orchestrate microautophagy in yeast. Mol Cell 19, 15-26 (2005).
-
(2005)
Mol Cell
, vol.19
, pp. 15-26
-
-
Dubouloz, F.1
Deloche, O.2
Wanke, V.3
Cameroni, E.4
De Virgilio, C.5
-
33
-
-
32044465506
-
TOR signaling in growth and metabolism
-
Wullschleger, S., Loewith, R., Hall, M. N. TOR signaling in growth and metabolism. Cell 124, 471-84 (2006).
-
(2006)
Cell
, vol.124
, pp. 471-484
-
-
Wullschleger, S.1
Loewith, R.2
Hall, M.N.3
-
34
-
-
0030021524
-
TOR controls translation initiation and early G1 progression in yeast
-
Barbet, N. C. et al. TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell 7, 25-42 (1996).
-
(1996)
Mol Biol Cell
, vol.7
, pp. 25-42
-
-
Barbet, N.C.1
-
35
-
-
11144273952
-
TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1
-
Martin, D. E., Soulard, A., Hall, M. N. TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119, 969-79 (2004).
-
(2004)
Cell
, vol.119
, pp. 969-979
-
-
Martin, D.E.1
Soulard, A.2
Hall, M.N.3
-
36
-
-
73849102829
-
Patients with long-term oral carriage harbor high-persister mutants of Candida albicans
-
Lafleur, M. D., Qi, Q., Lewis, K. Patients with long-term oral carriage harbor high-persister mutants of Candida albicans. Antimicrob Agents Chemother 54, 39-44 (2010).
-
(2010)
Antimicrob Agents Chemother
, vol.54
, pp. 39-44
-
-
Lafleur, M.D.1
Qi, Q.2
Lewis, K.3
-
37
-
-
84874233056
-
Fungicidal drugs induce a common oxidative-damage cellular death pathway
-
Belenky, P., Camacho, D., Collins, J. J. Fungicidal drugs induce a common oxidative-damage cellular death pathway. Cell Rep 3, 350-8 (2013).
-
(2013)
Cell Rep
, vol.3
, pp. 350-358
-
-
Belenky, P.1
Camacho, D.2
Collins, J.J.3
-
38
-
-
31444450560
-
Ras pathway signaling accelerates programmed cell death in the pathogenic fungus Candida albicans
-
Phillips, A. J., Crowe, J. D., Ramsdale, M. Ras pathway signaling accelerates programmed cell death in the pathogenic fungus Candida albicans. Proc Natl Acad Sci USA 103, 726-31 (2006).
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 726-731
-
-
Phillips, A.J.1
Crowe, J.D.2
Ramsdale, M.3
-
39
-
-
33745623641
-
Isolation of quiescent and nonquiescent cells from yeast stationary-phase cultures
-
Allen, C. et al. Isolation of quiescent and nonquiescent cells from yeast stationary-phase cultures. J Cell Biol 174, 89-100 (2006).
-
(2006)
J Cell Biol
, vol.174
, pp. 89-100
-
-
Allen, C.1
-
40
-
-
41649110034
-
Characterization of differentiated quiescent and nonquiescent cells in yeast stationary-phase cultures
-
Aragon, A. D. et al. Characterization of differentiated quiescent and nonquiescent cells in yeast stationary-phase cultures. Mol Biol Cell 19, 1271-80 (2008).
-
(2008)
Mol Biol Cell
, vol.19
, pp. 1271-1280
-
-
Aragon, A.D.1
-
41
-
-
80053906154
-
Heterogeneous bacterial persisters and engineering approaches to eliminate them
-
Allison, K. R., Brynildsen, M. P., Collins, J. J. Heterogeneous bacterial persisters and engineering approaches to eliminate them. Curr Opin Microbiol 14, 593-8 (2011).
-
(2011)
Curr Opin Microbiol
, vol.14
, pp. 593-598
-
-
Allison, K.R.1
Brynildsen, M.P.2
Collins, J.J.3
-
42
-
-
84873485631
-
Pharmacodynamics population dynamics, and the evolution of persistence in Staphylococcus aureus
-
Johnson, P. J., Levin, B. R. Pharmacodynamics, population dynamics, and the evolution of persistence in Staphylococcus aureus. PLoS Genet 9, e1003123 (2013).
-
(2013)
PLoS Genet
, vol.9
, pp. e1003123
-
-
Johnson, P.J.1
Levin, B.R.2
-
43
-
-
81555212273
-
Active starvation responses mediate antibiotic tolerance in biofilms and nutrient-limited bacteria
-
Nguyen, D. et al. Active starvation responses mediate antibiotic tolerance in biofilms and nutrient-limited bacteria. Science 334, 982-6 (2011).
-
(2011)
Science
, vol.334
, pp. 982-986
-
-
Nguyen, D.1
-
44
-
-
84893651400
-
Strength in numbers: Antifungal strategies against fungal biofilms
-
Ramage, G., Robertson, S. N., Williams, C. Strength in numbers: antifungal strategies against fungal biofilms. Int J Antimicrob Agents 43, 114-20 (2014).
-
(2014)
Int J Antimicrob Agents
, vol.43
, pp. 114-120
-
-
Ramage, G.1
Robertson, S.N.2
Williams, C.3
-
45
-
-
84864835458
-
Successful use of posaconazole to treat invasive cutaneous fungal infection in a liver transplant patient on sirolimus
-
Dahlan, R., Patel, A., Haider, S. Successful use of posaconazole to treat invasive cutaneous fungal infection in a liver transplant patient on sirolimus. Can J Infect Dis Med Microbiol 23, e44-7 (2012).
-
(2012)
Can J Infect Dis Med Microbiol
, vol.23
, pp. e44-e47
-
-
Dahlan, R.1
Patel, A.2
Haider, S.3
-
46
-
-
70149099763
-
Endogenous Aspergillus endophthalmitis occurring after liver transplantation: A case report
-
Hashemi, S. B. et al. Endogenous Aspergillus endophthalmitis occurring after liver transplantation: a case report. Transplant Proc 41, 2933-5 (2009).
-
(2009)
Transplant Proc
, vol.41
, pp. 2933-2935
-
-
Hashemi, S.B.1
-
47
-
-
49549109164
-
Combination antifungal therapy involving amphotericin B, rapamycin and 5-fluorocytosine using PEG-phospholipid micelles
-
Vakil, R., Knilans, K., Andes, D., Kwon, G. S. Combination antifungal therapy involving amphotericin B, rapamycin and 5-fluorocytosine using PEG-phospholipid micelles. Pharm Res 25, 2056-64 (2008).
-
(2008)
Pharm Res
, vol.25
, pp. 2056-2064
-
-
Vakil, R.1
Knilans, K.2
Andes, D.3
Kwon, G.S.4
-
48
-
-
67749101402
-
In vitro interactions between antifungals and immunosuppressive drugs against zygomycetes
-
Dannaoui, E., Schwarz, P., Lortholary, O. In vitro interactions between antifungals and immunosuppressive drugs against zygomycetes. Antimicrob Agents Chemother 53, 3549-51 (2009).
-
(2009)
Antimicrob Agents Chemother
, vol.53
, pp. 3549-3551
-
-
Dannaoui, E.1
Schwarz, P.2
Lortholary, O.3
-
49
-
-
0036146756
-
Rates and extents of antifungal activities of amphotericin B, flucytosine, fluconazole, and voriconazole against Candida lusitaniae determined by microdilution, Etest, and time-kill methods
-
Ernst, E. J., Yodoi, K., Roling, E. E., Klepser, M. E. Rates and extents of antifungal activities of amphotericin B, flucytosine, fluconazole, and voriconazole against Candida lusitaniae determined by microdilution, Etest, and time-kill methods. Antimicrob Agents Chemother 46, 578-81 (2002).
-
(2002)
Antimicrob Agents Chemother
, vol.46
, pp. 578-581
-
-
Ernst, E.J.1
Yodoi, K.2
Roling, E.E.3
Klepser, M.E.4
-
50
-
-
40549124325
-
EUCAST definitive document EDef 7.1: Method for the determination of broth dilution MICs of antifungal agents for fermentative yeasts
-
EUCAST.
-
EUCAST. EUCAST definitive document EDef 7.1: method for the determination of broth dilution MICs of antifungal agents for fermentative yeasts. Clin Microbiol Infect 14, 398-405 (2008).
-
(2008)
Clin Microbiol Infect
, vol.14
, pp. 398-405
-
-
-
51
-
-
84883364264
-
Count-based differential expression analysis of RNA sequencing data using R and Bioconductor
-
Anders, S. et al. Count-based differential expression analysis of RNA sequencing data using R and Bioconductor. Nat Protoc 8, 1765-86 (2013).
-
(2013)
Nat Protoc
, vol.8
, pp. 1765-1786
-
-
Anders, S.1
|