TGS-TB: Total genotyping solution for Mycobacterium tuberculosis using short-read whole-genome sequencing

PLoS ONE

Volumn 10, Issue 11, 2015, Pages

  Sekizuka, Tsuyoshi ^a   Yamashita, Akifumi ^a   Murase, Yoshiro ^b   Iwamoto, Tomotada ^c   Mitarai, Satoshi ^b   Kato, Seiya ^b   Kuroda, Makoto ^a  

^a NATIONAL INSTITUTE OF INFECTIOUS DISEASES   (Japan)

^b RESEARCH INSTITUTE OF TUBERCULOSIS   (Japan)

^c KOBE INSTITUTE OF HEALTH   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; DNA SEQUENCE; FEMALE; GENE SEQUENCE; GENETIC VARIABILITY; GENOME ANALYSIS; GENOTYPE; MOUSE; MYCOBACTERIUM TUBERCULOSIS; NEXT GENERATION SEQUENCING; NONHUMAN; PHYLOGENY; SINGLE NUCLEOTIDE POLYMORPHISM; STRAIN IDENTIFICATION; VARIABLE NUMBER OF TANDEM REPEAT; ANTIBIOTIC RESISTANCE; BACTERIUM IDENTIFICATION; BIOLOGY; CELL LINEAGE; CLASSIFICATION; GENETICS; GENOMICS; GENOTYPING TECHNIQUE; HUMAN; MICROBIOLOGY; MOLECULAR EPIDEMIOLOGY; PROCEDURES; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; TUBERCULOSIS;

BACTERIAL TYPING TECHNIQUES; CELL LINEAGE; COMPUTATIONAL BIOLOGY; DRUG RESISTANCE, BACTERIAL; GENOME, BACTERIAL; GENOMICS; GENOTYPING TECHNIQUES; HUMANS; MINISATELLITE REPEATS; MOLECULAR EPIDEMIOLOGY; MYCOBACTERIUM TUBERCULOSIS; PHYLOGENY; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ANALYSIS, DNA; TUBERCULOSIS;

EID: 84958967008     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0142951     Document Type: Article

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