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Volumn 7, Issue OUTBREAKS, 2015, Pages

Novel human-like influenza A Viruses circulate in swine in Mexico and Chile

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHILE; CLADISTICS; DISEASE SURVEILLANCE; GENE SEQUENCE; GENETIC DISTANCE; GENETIC VARIABILITY; INFLUENZA A VIRUS; INFLUENZA A VIRUS (H1N1); INFLUENZA A VIRUS (H1N2); MEXICO; MICROBIAL DIVERSITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PHYLOGENY; PIG; SEASONAL VARIATION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SPECIES INTRODUCTION; ZOONOSIS;

EID: 84958580744     PISSN: None     EISSN: 21573999     Source Type: Journal    
DOI: 10.1371/currents.outbreaks.c8b3207c9bad98474eca3013fa933ca6     Document Type: Article
Times cited : (32)

References (41)
  • 5
    • 77953766201 scopus 로고    scopus 로고
    • Reassortment of pandemic H1N1/2009 influenza A virus in swine
    • Jun 18, PubMed PMID:20558710, [PMC free article] [PubMed]
    • Vijaykrishna D, Poon LL, Zhu HC, Ma SK, Li OT, Cheung CL, Smith GJ, Peiris JS, Guan Y. Reassortment of pandemic H1N1/2009 influenza A virus in swine. Science. 2010 Jun 18;328(5985):1529. PubMed PMID:20558710. [PMC free article] [PubMed]
    • (2010) Science. , vol.328 , Issue.5985
    • Vijaykrishna, D.1    Poon, L.L.2    Zhu, H.C.3    Ma, S.K.4    Li, O.T.5    Cheung, C.L.6    Smith, G.J.7    Peiris, J.S.8    Guan, Y.9
  • 12
  • 13
    • 38349074298 scopus 로고    scopus 로고
    • Novel reassortant of swine influenza H1N2 virus in Germany
    • Jan, PubMed PMID:18089751, [PubMed]
    • Zell R, Motzke S, Krumbholz A, Wutzler P, Herwig V, Dürrwald R. Novel reassortant of swine influenza H1N2 virus in Germany. J Gen Virol. 2008 Jan;89(Pt 1):271-6. PubMed PMID:18089751. [PubMed]
    • (2008) J Gen Virol. , vol.89 , pp. 271-276
    • Zell, R.1    Motzke, S.2    Krumbholz, A.3    Wutzler, P.4    Herwig, V.5    Dürrwald, R.6
  • 14
    • 84877705772 scopus 로고    scopus 로고
    • Influenza A(H1N1)pdm09 virus infection in Norwegian swine herds 2009/10: The risk of human to swine transmission
    • Jul 1, PubMed PMID:23490143, [PubMed]
    • Grøntvedt CA, Er C, Gjerset B, Hauge AG, Brun E, Jørgensen A, Lium B, Framstad T. Influenza A(H1N1)pdm09 virus infection in Norwegian swine herds 2009/10: the risk of human to swine transmission. Prev Vet Med. 2013 Jul 1;110(3-4):429-34. PubMed PMID:23490143. [PubMed]
    • (2013) Prev Vet Med. , vol.110 , Issue.3-4 , pp. 429-434
    • Grøntvedt, C.A.1    Er, C.2    Gjerset, B.3    Hauge, A.G.4    Brun, E.5    Jørgensen, A.6    Lium, B.7    Framstad, T.8
  • 15
    • 79957645551 scopus 로고    scopus 로고
    • Reassortant Pandemic (H1N1) 2009 virus in pigs, United Kingdom
    • Jun, PubMed PMID:21749767, [PMC free article] [PubMed]
    • Howard WA, Essen SC, Strugnell BW, Russell C, Barass L, Reid SM, Brown IH. Reassortant Pandemic (H1N1) 2009 virus in pigs, United Kingdom. Emerg Infect Dis. 2011 Jun;17(6):1049-52. PubMed PMID:21749767. [PMC free article] [PubMed]
    • (2011) Emerg Infect Dis. , vol.17 , Issue.6 , pp. 1049-1052
    • Howard, W.A.1    Essen, S.C.2    Strugnell, B.W.3    Russell, C.4    Barass, L.5    Reid, S.M.6    Brown, I.H.7
  • 16
    • 84921949046 scopus 로고    scopus 로고
    • Introductions and evolution of human-origin seasonal influenza a viruses in multinational swine populations
    • Sep 1, PubMed PMID:24965467, [PMC free article] [PubMed]
    • Nelson MI, Wentworth DE, Culhane MR, Vincent AL, Viboud C, LaPointe MP, Lin X, Holmes EC, Detmer SE. Introductions and evolution of human-origin seasonal influenza a viruses in multinational swine populations. J Virol. 2014 Sep 1;88(17):10110-9. PubMed PMID:24965467. [PMC free article] [PubMed]
    • (2014) J Virol. , vol.88 , Issue.17 , pp. 10110-10119
    • Nelson, M.I.1    Wentworth, D.E.2    Culhane, M.R.3    Vincent, A.L.4    Viboud, C.5    LaPointe, M.P.6    Lin, X.7    Holmes, E.C.8    Detmer, S.E.9
  • 17
    • 84866342594 scopus 로고    scopus 로고
    • Global transmission of influenza viruses from humans to swine
    • Oct, PubMed PMID:22791604, [PMC free article] [PubMed]
    • Nelson MI, Gramer MR, Vincent AL, Holmes EC. Global transmission of influenza viruses from humans to swine. J Gen Virol. 2012 Oct;93(Pt 10):2195-203. PubMed PMID:22791604. [PMC free article] [PubMed]
    • (2012) J Gen Virol. , vol.93 , pp. 2195-2203
    • Nelson, M.I.1    Gramer, M.R.2    Vincent, A.L.3    Holmes, E.C.4
  • 23
    • 79958016930 scopus 로고    scopus 로고
    • Characterizing the epidemiology of the 2009 influenza A/H1N1 pandemic in Mexico
    • May, PubMed PMID:21629683, [PMC free article] [PubMed]
    • Chowell G, Echevarría-Zuno S, Viboud C, Simonsen L, Tamerius J, Miller MA, Borja-Aburto VH. Characterizing the epidemiology of the 2009 influenza A/H1N1 pandemic in Mexico. PLoS Med. 2011 May;8(5):e1000436. PubMed PMID:21629683. [PMC free article] [PubMed]
    • (2011) PLoS Med. , vol.8 , Issue.5
    • Chowell, G.1    Echevarría-Zuno, S.2    Viboud, C.3    Simonsen, L.4    Tamerius, J.5    Miller, M.A.6    Borja-Aburto, V.H.7
  • 25
    • 84921913728 scopus 로고    scopus 로고
    • A human-like H1N2 influenza virus detected during an outbreak of acute respiratory disease in swine in Brazil
    • Jan, PubMed PMID:25209152, [PubMed]
    • Schaefer R, Rech RR, Gava D, Cantão ME, da Silva MC, Silveira S, Zanella JR. A human-like H1N2 influenza virus detected during an outbreak of acute respiratory disease in swine in Brazil. Arch Virol. 2015 Jan;160(1):29-38. PubMed PMID:25209152. [PubMed]
    • (2015) Arch Virol. , vol.160 , Issue.1 , pp. 29-38
    • Schaefer, R.1    Rech, R.R.2    Gava, D.3    Cantão, M.E.4    da Silva, M.C.5    Silveira, S.6    Zanella, J.R.7
  • 28
    • 84937397168 scopus 로고    scopus 로고
    • Influenza A viruses of human origin in swine, Brazil
    • Aug. [PMC free article] [PubMed] [Cross Ref]
    • Nelson MI, Schaefer R, Gava D, Cantão ME, Ciacci-Zanella JR. Influenza A viruses of human origin in swine, Brazil. Emerg Infect Dis. 2015 Aug. http://dx.doi.org/10.3201/eid2108.141891 10.3201/eid2108.141891 [PMC free article] [PubMed] [Cross Ref]
    • (2015) Emerg Infect Dis.
    • Nelson, M.I.1    Schaefer, R.2    Gava, D.3    Cantão, M.E.4    Ciacci-Zanella, J.R.5
  • 29
    • 84876111621 scopus 로고    scopus 로고
    • Isolation and complete genomic characterization of pandemic H1N1/2009 influenza viruses from Cuban swine herds
    • Jun, PubMed PMID:23318219, [PubMed]
    • Pérez LJ, Perera CL, Vega A, Frías MT, Rouseaux D, Ganges L, Nuñez JI, Díaz de Arce H. Isolation and complete genomic characterization of pandemic H1N1/2009 influenza viruses from Cuban swine herds. Res Vet Sci. 2013 Jun;94(3):781-8. PubMed PMID:23318219. [PubMed]
    • (2013) Res Vet Sci. , vol.94 , Issue.3 , pp. 781-788
    • Pérez, L.J.1    Perera, C.L.2    Vega, A.3    Frías, M.T.4    Rouseaux, D.5    Ganges, L.6    Nuñez, J.I.7    Díaz de Arce, H.8
  • 30
    • 77955819950 scopus 로고    scopus 로고
    • Real time reverse transcription (RRT)-polymerase chain reaction (PCR) methods for detection of pandemic (H1N1) 2009 influenza virus and European swine influenza A virus infections in pigs
    • Sep, PubMed PMID:20716157, [PMC free article] [PubMed]
    • Slomka MJ, Densham AL, Coward VJ, Essen S, Brookes SM, Irvine RM, Spackman E, Ridgeon J, Gardner R, Hanna A, Suarez DL, Brown IH. Real time reverse transcription (RRT)-polymerase chain reaction (PCR) methods for detection of pandemic (H1N1) 2009 influenza virus and European swine influenza A virus infections in pigs. Influenza Other Respir Viruses. 2010 Sep;4(5):277-93. PubMed PMID:20716157. [PMC free article] [PubMed]
    • (2010) Influenza Other Respir Viruses. , vol.4 , Issue.5 , pp. 277-293
    • Slomka, M.J.1    Densham, A.L.2    Coward, V.J.3    Essen, S.4    Brookes, S.M.5    Irvine, R.M.6    Spackman, E.7    Ridgeon, J.8    Gardner, R.9    Hanna, A.10    Suarez, D.L.11    Brown, I.H.12
  • 31
    • 84922479796 scopus 로고    scopus 로고
    • RNA extraction from swine samples and detection of influenza A virus in swine by real-time RT-PCR
    • PubMed PMID:24899437 [PubMed]
    • Zhang J, Harmon KM. RNA extraction from swine samples and detection of influenza A virus in swine by real-time RT-PCR. Methods Mol Biol. 2014;1161:277-93. PubMed PMID:24899437. [PubMed]
    • (2014) Methods Mol Biol. , vol.1161 , pp. 277-293
    • Zhang, J.1    Harmon, K.M.2
  • 32
    • 0035559445 scopus 로고    scopus 로고
    • Universal primer set for the full-length amplification of all influenza A viruses
    • Dec, PubMed PMID:11811679, [PubMed]
    • Hoffmann E, Stech J, Guan Y, Webster RG, Perez DR. Universal primer set for the full-length amplification of all influenza A viruses. Arch Virol. 2001 Dec;146(12):2275-89. PubMed PMID:11811679. [PubMed]
    • (2001) Arch Virol. , vol.146 , Issue.12 , pp. 2275-2289
    • Hoffmann, E.1    Stech, J.2    Guan, Y.3    Webster, R.G.4    Perez, D.R.5
  • 33
    • 13244255415 scopus 로고    scopus 로고
    • MUSCLE: A multiple sequence alignment method with reduced time and space complexity
    • Aug 19, PubMed PMID:15318951, [PMC free article] [PubMed]
    • Edgar RC. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics. 2004 Aug 19;5:113. PubMed PMID:15318951. [PMC free article] [PubMed]
    • (2004) BMC Bioinformatics. , vol.5
    • Edgar, R.C.1
  • 34
    • 37849052232 scopus 로고    scopus 로고
    • The influenza virus resource at the National Center for Biotechnology Information
    • Jan, PubMed PMID:17942553, [PMC free article] [PubMed]
    • Bao Y, Bolotov P, Dernovoy D, Kiryutin B, Zaslavsky L, Tatusova T, Ostell J, Lipman D. The influenza virus resource at the National Center for Biotechnology Information. J Virol. 2008 Jan;82(2):596-601. PubMed PMID:17942553. [PMC free article] [PubMed]
    • (2008) J Virol. , vol.82 , Issue.2 , pp. 596-601
    • Bao, Y.1    Bolotov, P.2    Dernovoy, D.3    Kiryutin, B.4    Zaslavsky, L.5    Tatusova, T.6    Ostell, J.7    Lipman, D.8
  • 35
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Nov 1, PubMed PMID:16928733, [PubMed]
    • Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 2006 Nov 1;22(21):2688-90. PubMed PMID:16928733. [PubMed]
    • (2006) Bioinformatics. , vol.22 , Issue.21 , pp. 2688-2690
    • Stamatakis, A.1
  • 36
    • 84864530626 scopus 로고    scopus 로고
    • Bayesian phylogenetics with BEAUti and the BEAST 1.7
    • Aug, PubMed PMID:22367748, [PMC free article] [PubMed]
    • Drummond AJ, Suchard MA, Xie D, Rambaut A. Bayesian phylogenetics with BEAUti and the BEAST 1.7. Mol Biol Evol. 2012 Aug;29(8):1969-73. PubMed PMID:22367748. [PMC free article] [PubMed]
    • (2012) Mol Biol Evol. , vol.29 , Issue.8 , pp. 1969-1973
    • Drummond, A.J.1    Suchard, M.A.2    Xie, D.3    Rambaut, A.4
  • 37
    • 65649118549 scopus 로고    scopus 로고
    • Many-core algorithms for statistical phylogenetics
    • Jun 1, PubMed PMID:19369496, [PMC free article] [PubMed]
    • Suchard MA, Rambaut A. Many-core algorithms for statistical phylogenetics. Bioinformatics. 2009 Jun 1;25(11):1370-6. PubMed PMID:19369496. [PMC free article] [PubMed]
    • (2009) Bioinformatics. , vol.25 , Issue.11 , pp. 1370-1376
    • Suchard, M.A.1    Rambaut, A.2
  • 38
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Oct, PubMed PMID:21546353, [PMC free article] [PubMed]
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011 Oct;28(10):2731-9. PubMed PMID:21546353. [PMC free article] [PubMed]
    • (2011) Mol Biol Evol. , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 41
    • 80053947748 scopus 로고    scopus 로고
    • Reassortment events among swine influenza A viruses in China: Implications for the origin of the 2009 influenza pandemic
    • Oct, PubMed PMID:21795347, [PMC free article] [PubMed]
    • Lam TT, Zhu H, Wang J, Smith DK, Holmes EC, Webster RG, Webby R, Peiris JM, Guan Y. Reassortment events among swine influenza A viruses in China: implications for the origin of the 2009 influenza pandemic. J Virol. 2011 Oct;85(19):10279-85. PubMed PMID:21795347. [PMC free article] [PubMed]
    • (2011) J Virol. , vol.85 , Issue.19 , pp. 10279-10285
    • Lam, T.T.1    Zhu, H.2    Wang, J.3    Smith, D.K.4    Holmes, E.C.5    Webster, R.G.6    Webby, R.7    Peiris, J.M.8    Guan, Y.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.