Antigenic variation of H1N1, H1N2 and H3N2 swine influenza viruses in Japan and Vietnam

Archives of Virology

Volumn 158, Issue 4, 2013, Pages 859-876

  Takemae, Nobuhiro ^a,b   Nguyen, Tung ^c   Ngo, Long Thanh ^d   Hiromoto, Yasuaki ^a,b   Uchida, Yuko ^a,b   Pham, Vu Phong ^d   Kageyama, Tsutomu ^e   Kasuo, Shizuko ^f   Shimada, Shinichi ^g   Yamashita, Yasutaka ^h   Goto, Kaoru ⁱ   Kubo, Hideyuki ⁱ   Le, Vu Tri ^d   Van Vo, Hung ^d   Do, Hoa Thi ^c   Nguyen, Dang Hoang ^c   Hayashi, Tsuyoshi ^a,b   Matsuu, Aya ^a,b   Saito, Takehiko ^a,b,j  

^a Thailand Japan Zoonotic Diseases Collaboration Center   (Thailand)

^b NATIONAL INSTITUTE OF ANIMAL HEALTH   (Japan)

^c National Centre for Veterinary Diagnostics   (Viet Nam)

^d Center for Veterinary Diagnostics   (Viet Nam)

^e NATIONAL INSTITUTE OF INFECTIOUS DISEASES   (Japan)

^f NAGANO ENVIRONMENTAL CONSERVATION RESEARCH INSTITUTE   (Japan)

^g SAITAMA INSTITUTE OF PUBLIC HEALTH   (Japan)

^h EHIME PREFECTURAL INSTITUTE OF PUBLIC HEALTH AND ENVIRONMENTAL SCIENCE   (Japan)

ⁱ OSAKA CITY INSTITUTE OF PUBLIC HEALTH AND ENVIRONMENTAL SCIENCES   (Japan)

^j GIFU UNIVERSITY   (Japan)

more..

Author keywords

[No Author keywords available]

Indexed keywords

INFLUENZA A VIRUS; MUSTELA; ORTHOMYXOVIRIDAE; SIMIAN IMMUNODEFICIENCY VIRUS; SUIDAE; SWINE INFLUENZA VIRUS;

EID: 84876025469     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-013-1616-8     Document Type: Article

References (44)

1. Olsen CW, Brown IH, Easterday BC, van Reeth K (2006) Swine influenza. In: Straw DJ, Zimmerman JJ, d'Alaaire S, Taylor DJ (eds) Diseases of swine, 9th edn. Blackwell Publishing, Oxford, pp 469-482.
2. Bennett R, Ijpelaar J (2005) Updated estimates of the costs associated with thirty four endemic livestock diseases in Great Britain: A note. J Agr Econ 56(1): 135-144. doi: 10. 1111/j. 1477-9552. 2005. tb00126. x.
3. Webster RG, Bean WJ, Gorman OT, Chambers TM, Kawaoka Y (1992) Evolution and ecology of influenza A viruses. Microbiol Rev 56(1): 152-179. doi: 0146-0749/92/010152-28$02. 00/0.
4. Scholtissek C, Burger H, Bachmann PA, Hannoun C (1983) Genetic relatedness of hemagglutinins of the H1 subtype of influenza a viruses isolated from swine and birds. Virology 129(2): 521-523. doi: 10. 1016/0042-6822(83)90194-0.
5. Brown IH, Harris PA, McCauley JW, Alexander DJ (1998) Multiple genetic reassortment of avian and human influenza A viruses in European pigs, resulting in the emergence of an H1N2 virus of novel genotype. J Gen Virol 79(12): 2947-2955.
6. Webby RJ, Swenson SL, Krauss SL, Gerrish PJ, Goyal SM, Webster RG (2000) Evolution of swine H3N2 influenza viruses in the United States. J Virol 74(18): 8243-8251. doi: 10. 1128/jvi. 74. 18. 8243-8251. 2000.
7. Vijaykrishna D, Poon LLM, Zhu HC, Ma SK, Li OTW, Cheung CL, Smith GJD, Peiris JSM, Guan Y (2010) Reassortment of pandemic H1N1/2009 influenza A virus in swine. Science 328(5985): 1529. doi: 10. 1126/science. 1189132.
8. Howden KJ, Brockhoff EJ, Caya FD, McLeod LJ, Lavoie M, Ing JD, Bystrom JM, Alexandersen S, Pasick JM, Berhane Y, Morrison ME, Keenliside JM, Laurendeau S, Rohonczy EB (2009) An investigation into human pandemic influenza virus (H1N1) 2009 on an Alberta swine farm. Can Vet J 50(11): 1153-1161.
9. Starick E, Lange E, Grund C, Grosse Beilage E, Dohring S, Maas A, Noe T, Beer M, Harder TC (2012) Reassortants of pandemic influenza A virus H1N1/2009 and endemic porcine HxN2 viruses emerge in swine populations in Germany. J Gen Virol 93: 1658-1663. doi: 10. 1099/vir. 0. 042648-0.
10. Fan X, Zhu H, Zhou B, Smith DK, Chen X, Lam TTY, Poon LLM, Peiris M, Guan Y (2012) Emergence and dissemination of a swine H3N2 reassortant influenza virus with 2009 pandemic H1N1 genes in pigs in China. J Virol 86(4): 2375-2378. doi: 10. 1128/jvi. 06824-11.
11. Sugimura T, Yonemochi H, Ogawa T, Tanaka Y, Kumagai T (1980) Isolation of a recombinant influenza virus (Hsw 1 N2) from swine in Japan. Arch Virol 66(3): 271-274. doi: 10. 1007/BF01314741.
12. Nerome K, Sakamoto S, Yano N, Yamamoto T, Kobayashi S, Webster RG, Oya A (1983) Antigenic characteristics and genome composition of a naturally occurring recombinant influenza virus isolated from a pig in Japan. J Gen Virol 64(12): 2611-2620. doi: 10. 1099/0022-1317-64-12-2611.
13. Saito T, Suzuki H, Maeda K, Inai K, Takemae N, Uchida Y (2006) Tsunemitsu H (2008) Molecular characterization of an H1N2 swine influenza virus isolated in Miyazaki, Japan, in. J Vet Med Sci 70(4): 423-427. doi: 10. 1292/jvms. 70. 423.
14. Saito T, Takemae N, Uchida Y, Hiromoto Y, Hayashi T (2010) Evolutional analysis of swine influenza virus in Japan. Paper presented at the XIV International Conference on Negative Strand Viruses, Brugge, Belgium, pp 20-25.
15. Ngo LT, Hiromoto Y, Pham V, Le HT, Nguyen HT, Le VT, Takemae N, Saito T (201) Isolation of novel triple-reassortant swine H3N2 influenza viruses possessing the hemagglutinin and neuraminidase genes of a seasonal influenza virus in Vietnam in 2010. Influenza Other Respi Viruses 6(1): 6-10. doi: 10. 1111/j. 1750-2659. 2011. 00267. x.
16. Ma W, Richt AJ (2010) Swine influenza vaccines: current status and future perspectives. Anim Health Res Rev 11: 81-96. doi: 10. 1017/S146625231000006X.
17. van Reeth K, Brown I, Essen S, Pensaert M (2004) Genetic relationships, serological cross-reaction and cross-protection between H1N2 and other influenza A virus subtypes endemic in European pigs. Virus Res 103(1-2): 115-124. doi: 10. 1016/j. virusres. 2004. 02. 023.
18. van Reeth K, De Clercq S, Pensaert M (2001) Lack of cross-protection between European H1N1 and H1N2 swine influenza viruses. Int Congr 1219: 341-345. doi: 10. 1016/S0531-5131(01)00345-4.
19. Daidoji T, Koma T, Du A, Yang C-S, Ueda M, Ikuta K, Nakaya T (2008) H5N1 avian influenza virus induces apoptotic cell death in mammalian airway epithelial cells. J Virol 82(22): 11294-11307. doi: 10. 1128/jvi. 01192-08.
20. Takemae N, Parchariyanon S, Ruttanapumma R, Hiromoto Y, Hayashi T, Uchida Y, Saito T (2011) Swine influenza virus infection in different age groups of pigs in farrow-to-finish farms in Thailand. Virol J 8(1): 537. doi: 10. 1186/1743-422X-8-537.
21. Takemae N, Parchariyanon S, Damrongwatanapokin S, Uchida Y, Ruttanapumma R, Watanabe C, Yamaguchi S, Saito T (2008) Genetic diversity of swine influenza viruses isolated from pigs during 2000 to 2005 in Thailand. Influenza Other Respi Viruses 2(5): 181-189. doi: 10. 1111/j. 1750-2659. 2008. 00062. x.
22. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp 41: 95-98.
23. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10): 2731-2739. doi: 10. 1093/molbev/msr121.
24. Igarashi M, Ito K, Yoshida R, Tomabechi D, Kida H, Takada A (2010) Predicting the Antigenic Structure of the Pandemic (H1N1) 2009 Influenza Virus Hemagglutinin. PLoS ONE 5(1): e8553. doi: 10. 1371/journal. pone. 0008553.
25. Wiley DC, Skehel JJ (1987) The Structure and Function of the Hemagglutinin Membrane Glycoprotein of Influenza Virus. Annu Rev Biochem 56(1): 365-394. doi: 10. 1146/annurev. bi. 56. 070187. 002053.
26. Loeffen WLA, Stockhofe N, Weesendorp E, van Zoelen-Bos D, Heutink R, Quak S, Goovaerts D, Heldens JGM, Maas R, Moormann RJ, Koch G (2011) Efficacy of a pandemic (H1N1) 2009 virus vaccine in pigs against the pandemic influenza virus is superior to commercially available swine influenza vaccines. Vet Microbiol 152(3-4): 304-314. doi: 10. 1016/j. vetmic. 2011. 05. 027.
27. Romagosa A, Allerson M, Gramer M, Joo HS, Deen J, Detmer S, Torremorell M (2011) Vaccination of influenza a virus decreases transmission rates in pigs. Vet Res 42: 120. doi: 10. 1186/1297-9716-42-120.
28. Vincent AL, Lager KM, Janke BH, Gramer MR, Richt JA (2008) Failure of protection and enhanced pneumonia with a US H1N2 swine influenza virus in pigs vaccinated with an inactivated classical swine H1N1 vaccine. Vet Microbiol 126(4): 310-323. doi: 10. 1016/j. vetmic. 2007. 07. 011.
29. de Jong JC, van Nieuwstadt AP, Kimman TG, Loeffen WLA, Bestebroer TM, Bijlsma K, Verweij C, Osterhaus ADME, Claas ECJ (1999) Antigenic drift in swine influenza H3 haemagglutinins with implications for vaccination policy. Vaccine 17(11-12): 1321-1328. doi: 10. 1016/S0264-410X(98)00392-2.
30. de Jong JC, Smith DJ, Lapedes AS, Donatelli I, Campitelli L, Barigazzi G, van Reeth K, Jones TC, Rimmelzwaan GF, Osterhaus ADME, Fouchier RAM (2007) Antigenic and Genetic Evolution of Swine Influenza A (H3N2) Viruses in Europe. J Virol 81(8): 4315-4322. doi: 10. 1128/jvi. 02458-06.
31. Heinen PP, van Nieuwstadt AP, de Boer-Luijtze EA, Bianchi ATJ (2001) Analysis of the quality of protection induced by a porcine influenza A vaccine to challenge with an H3N2 virus. Vet Immunol Immunopathol 82(1-2): 39-56. doi: 10. 1016/s0165-2427(01)00342-7.
32. van Reeth K, van Gucht S, Pensaert M (2003) Investigations of the efficacy of European H1N1- and H3N2-based swine influenza vaccines against the novel H1N2 subtype. Vet Rec 153(1): 9-13. doi: 10. 1136/vr. 153. 1. 9.
33. Kyriakis CS, Gramer MR, Barbé F, van Doorsselaere J, van Reeth K (2010) Efficacy of commercial swine influenza vaccines against challenge with a recent European H1N1 field isolate. Vet Microbiol 144(1-2): 67-74. doi: 10. 1016/j. vetmic. 2009. 12. 039.
34. Webster RG, Thomas TL (1993) Efficacy of equine influenza vaccines for protection against A/Equine/Jilin/89 (H3N8) - A new equine influenza virus. Vaccine 11(10): 987-993. doi: 10. 1016/0264-410x(93)90122-e.
35. Richt JA, Lager KM, Janke BH, Woods RD, Webster RG, Webby RJ (2003) Pathogenic and antigenic properties of phylogenetically distinct reassortant H3N2 swine influenza viruses cocirculating in the United States. J Clin Microbiol 41(7): 3198-3205. doi: 10. 1128/jcm. 41. 7. 3198-3205. 2003.
36. Gramer MR, Lee JH, Choi YK, Goyal SM, Joo HS (2007) Serologic and genetic characterization of North American H3N2 swine influenza A viruses. Can J Vet Res 71(3): 201-206.
37. Nelson M, Gramer M, Vincent A, Holmes EC (2012) Global transmission of influenza viruses from humans to swine. J Gen Virol 93(10): 2195-2203. doi: 10. 1099/vir. 0. 044974-0.
38. Vincent AL, Ciacci-Zanella JR, Lorusso A, Gauger PC, Zanella EL, Kehrli ME Jr, Janke BH, Lager KM (2010) Efficacy of inactivated swine influenza virus vaccines against the 2009 A/H1N1 influenza virus in pigs. Vaccine 28(15): 2782-2787. doi: 10. 1016/j. vaccine. 2010. 01. 049.
39. Lorusso A, Vincent AL, Harland ML, Alt D, Bayles DO, Swenson SL, Gramer MR, Russell CA, Smith DJ, Lager KM (2008) Lewis NS (2011) Genetic and antigenic characterization of H1 influenza viruses from United States swine from. J Gen Virol 92(4): 919-930. doi: 10. 1099/vir. 0. 027557-0.
40. Matsuu A, Uchida Y, Takemae N, MawatariI T, Yoneyama S, Kasai T, Nakamura R, Eto M (2012) Saito T (2012) Genetic characterization of swine influenza viruses isolated in Japan between 2009 and. Microbiol Immunol 56(11): 792-803. doi: 10. 1111/j. 1348-0421. 2012. 00501. x.
41. Lee C, Kang B, Kim H, Park S, Park B, Jung K, Song D (2008) Phylogenetic analysis of swine influenza viruses recently isolated in Korea. Virus Genes 37(2): 168-176. doi: 10. 1007/s11262-008-0251-z.
42. Ministry of Agriculture Forestry and Fisheries, Japan (2011) STATISTICAL YEARBOOK OF MINISTRY OF AGRICULTURE, FORESTRY AND FISHERIES. http://www. maff. go. jp/j/tokei/kouhyou/tikusan/index. html. Accessed 2012/11/19.
43. National Veterinary Assay Laboratory (2012) http://www. maff. go. jp/nval/kentei_kensa/index. html. Accessed 2012/11/16.
44. van Reeth K, Labarque G, Clercq SD, Pensaert M (2001) Efficacy of vaccination of pigs with different H1N1 swine influenza viruses using a recent challenge strain and different parameters of protection. Vaccine 19(31): 4479-4486. doi: 10. 1016/s0264-410x(01)00206-7.