-
1
-
-
84974659948
-
Alphaviruses
-
Knipe DM, Howley PM, Cohen JI, Griffin DE, Lamb RA, Martin MA, Racaniello VR, Roizman B (ed), Lippincott Williams & Wilkins, Philadelphia, PA, 6th ed
-
Griffin DE. 2013. Alphaviruses, p 651-686. In Knipe DM, Howley PM, Cohen JI, Griffin DE, Lamb RA, Martin MA, Racaniello VR, Roizman B (ed), Fields virology, 6th ed, vol 1. Lippincott Williams & Wilkins, Philadelphia, PA.
-
(2013)
Fields virology
, vol.1
, pp. 651-686
-
-
Griffin, D.E.1
-
3
-
-
84876448042
-
(+)RNA viruses rewire cellular pathways to build replication organelles
-
Belov GA, van Kuppeveld FJ. 2012. (+)RNA viruses rewire cellular pathways to build replication organelles. Curr Opin Virol 2:740-747. http://dx.doi.org/10.1016/j.coviro.2012.09.006.
-
(2012)
Curr Opin Virol
, vol.2
, pp. 740-747
-
-
Belov, G.A.1
van Kuppeveld, F.J.2
-
4
-
-
84885998217
-
Architecture and biogenesis of plusstrand RNA virus replication factories
-
Paul D, Bartenschlager R. 2013. Architecture and biogenesis of plusstrand RNA virus replication factories. World J Virol 2:32-48. http://dx.doi.org/10.5501/wjv.v2.i2.32.
-
(2013)
World J Virol
, vol.2
, pp. 32-48
-
-
Paul, D.1
Bartenschlager, R.2
-
5
-
-
0036371127
-
Functions of alphavirus nonstructural proteins in RNA replication
-
Kääriäinen L, Ahola T. 2002. Functions of alphavirus nonstructural proteins in RNA replication. Prog Nucleic Acid Res Mol Biol 71:187-222. http://dx.doi.org/10.1016/S0079-6603(02)71044-1.
-
(2002)
Prog Nucleic Acid Res Mol Biol
, vol.71
, pp. 187-222
-
-
Kääriäinen, L.1
Ahola, T.2
-
6
-
-
84881231721
-
Template RNA length determines the size of replication complex spherules for Semliki Forest virus
-
Kallio K, Hellstrom K, Balistreri G, Spuul P, Jokitalo E, Ahola T. 2013. Template RNA length determines the size of replication complex spherules for Semliki Forest virus. J Virol 87:9125-9134. http://dx.doi.org/10.1128/JVI.00660-13.
-
(2013)
J Virol
, vol.87
, pp. 9125-9134
-
-
Kallio, K.1
Hellstrom, K.2
Balistreri, G.3
Spuul, P.4
Jokitalo, E.5
Ahola, T.6
-
7
-
-
79955426289
-
Assembly of alphavirus replication complexes from RNA and protein components in a novel trans-replication system in mammalian cells
-
Spuul P, Balistreri G, Hellstrom K, Golubtsov AV, Jokitalo E, Ahola T. 2011. Assembly of alphavirus replication complexes from RNA and protein components in a novel trans-replication system in mammalian cells. J Virol 85:4739-4751. http://dx.doi.org/10.1128/JVI.00085-11.
-
(2011)
J Virol
, vol.85
, pp. 4739-4751
-
-
Spuul, P.1
Balistreri, G.2
Hellstrom, K.3
Golubtsov, A.V.4
Jokitalo, E.5
Ahola, T.6
-
8
-
-
0031060112
-
Critical residues of Semliki Forest virus RNA capping enzyme involved in methyltransferase and guanylyltransferase-like activities
-
Ahola T, Laakkonen P, Vihinen H, Kaariainen L. 1997. Critical residues of Semliki Forest virus RNA capping enzyme involved in methyltransferase and guanylyltransferase-like activities. J Virol 71:392-397.
-
(1997)
J Virol
, vol.71
, pp. 392-397
-
-
Ahola, T.1
Laakkonen, P.2
Vihinen, H.3
Kaariainen, L.4
-
9
-
-
33846052318
-
Role of the amphipathic peptide of Semliki forest virus replicase protein nsP1 in membrane association and virus replication
-
Spuul P, Salonen A, Merits A, Jokitalo E, Kaariainen L, Ahola T. 2007. Role of the amphipathic peptide of Semliki forest virus replicase protein nsP1 in membrane association and virus replication. J Virol 81:872-883. http://dx.doi.org/10.1128/JVI.01785-06.
-
(2007)
J Virol
, vol.81
, pp. 872-883
-
-
Spuul, P.1
Salonen, A.2
Merits, A.3
Jokitalo, E.4
Kaariainen, L.5
Ahola, T.6
-
10
-
-
0029879411
-
Mutagenesis of the Sindbis virus nsP1 protein: effects on methyltransferase activity and viral infectivity
-
Wang HL, O'Rear J, Stollar V. 1996. Mutagenesis of the Sindbis virus nsP1 protein: effects on methyltransferase activity and viral infectivity. Virology 217:527-531. http://dx.doi.org/10.1006/viro.1996.0147.
-
(1996)
Virology
, vol.217
, pp. 527-531
-
-
Wang, H.L.1
O'Rear, J.2
Stollar, V.3
-
11
-
-
0033152498
-
Semliki Forest virus mRNA capping enzyme requires association with anionic membrane phospholipids for activity
-
Ahola T, Lampio A, Auvinen P, Kaariainen L. 1999. Semliki Forest virus mRNA capping enzyme requires association with anionic membrane phospholipids for activity. EMBO J 18:3164-3172. http://dx.doi.org/10.1093/emboj/18.11.3164.
-
(1999)
EMBO J
, vol.18
, pp. 3164-3172
-
-
Ahola, T.1
Lampio, A.2
Auvinen, P.3
Kaariainen, L.4
-
12
-
-
0029956554
-
The effects of palmitoylation on membrane association of Semliki forest virus RNA capping enzyme
-
Laakkonen P, Ahola T, Kaariainen L. 1996. The effects of palmitoylation on membrane association of Semliki forest virus RNA capping enzyme. J Biol Chem 271:28567-28571. http://dx.doi.org/10.1074/jbc.271.45.28567.
-
(1996)
J Biol Chem
, vol.271
, pp. 28567-28571
-
-
Laakkonen, P.1
Ahola, T.2
Kaariainen, L.3
-
13
-
-
34347366405
-
Mutations at the palmitoylation site of non-structural protein nsP1 of Semliki Forest virus attenuate virus replication and cause accumulation of compensatory mutations
-
Zusinaite E, Tints K, Kiiver K, Spuul P, Karo-Astover L, Merits A, Sarand I. 2007. Mutations at the palmitoylation site of non-structural protein nsP1 of Semliki Forest virus attenuate virus replication and cause accumulation of compensatory mutations. J Gen Virol 88:1977-1985. http://dx.doi.org/10.1099/vir.0.82865-0.
-
(2007)
J Gen Virol
, vol.88
, pp. 1977-1985
-
-
Zusinaite, E.1
Tints, K.2
Kiiver, K.3
Spuul, P.4
Karo-Astover, L.5
Merits, A.6
Sarand, I.7
-
14
-
-
84896884405
-
Functional crosstalk between distant domains of Chikungunya virus non-structural protein 2 is decisive for its RNA-modulating activity
-
Das PK, Merits A, Lulla A. 2014. Functional crosstalk between distant domains of Chikungunya virus non-structural protein 2 is decisive for its RNA-modulating activity. J Biol Chem 289:5635-5653. http://dx.doi.org/10.1074/jbc. M113.503433.
-
(2014)
J Biol Chem
, vol.289
, pp. 5635-5653
-
-
Das, P.K.1
Merits, A.2
Lulla, A.3
-
15
-
-
0034625437
-
Identification of a novel function of the alphavirus capping apparatus. RNA 5'-triphosphatase activity of Nsp2
-
Vasiljeva L, Merits A, Auvinen P, Kääriäinen L. 2000. Identification of a novel function of the alphavirus capping apparatus. RNA 5'-triphosphatase activity of Nsp2. J Biol Chem 275:17281-17287.
-
(2000)
J Biol Chem
, vol.275
, pp. 17281-17287
-
-
Vasiljeva, L.1
Merits, A.2
Auvinen, P.3
Kääriäinen, L.4
-
16
-
-
0035057147
-
Proteolytic processing of Semliki Forest virus-specific non-structural polyprotein by nsP2 protease
-
Merits A, Vasiljeva L, Ahola T, Kaariainen L, Auvinen P. 2001. Proteolytic processing of Semliki Forest virus-specific non-structural polyprotein by nsP2 protease. J Gen Virol 82:765-773. http://dx.doi.org/10.1099/0022-1317-82-4-765.
-
(2001)
J Gen Virol
, vol.82
, pp. 765-773
-
-
Merits, A.1
Vasiljeva, L.2
Ahola, T.3
Kaariainen, L.4
Auvinen, P.5
-
17
-
-
0027067063
-
Identification of the active site residues in the nsP2 proteinase of Sindbis virus
-
Strauss EG, De Groot RJ, Levinson R, Strauss JH. 1992. Identification of the active site residues in the nsP2 proteinase of Sindbis virus. Virology 191:932-940. http://dx.doi.org/10.1016/0042-6822(92)90268-T.
-
(1992)
Virology
, vol.191
, pp. 932-940
-
-
Strauss, E.G.1
De Groot, R.J.2
Levinson, R.3
Strauss, J.H.4
-
18
-
-
0035937166
-
Elimination of phosphorylation sites of Semliki Forest virus replicase protein nsP3
-
Vihinen H, Ahola T, Tuittila M, Merits A, Kaariainen L. 2001. Elimination of phosphorylation sites of Semliki Forest virus replicase protein nsP3. J Biol Chem 276:5745-5752. http://dx.doi.org/10.1074/jbc. M006077200.
-
(2001)
J Biol Chem
, vol.276
, pp. 5745-5752
-
-
Vihinen, H.1
Ahola, T.2
Tuittila, M.3
Merits, A.4
Kaariainen, L.5
-
19
-
-
58549095054
-
Characterization of purified Sindbis virus nsP4 RNA-dependent RNA polymerase activity in vitro
-
Rubach JK, Wasik BR, Rupp JC, Kuhn RJ, Hardy RW, Smith JL. 2009. Characterization of purified Sindbis virus nsP4 RNA-dependent RNA polymerase activity in vitro. Virology 384:201-208. http://dx.doi.org/10.1016/j.virol.2008.10.030.
-
(2009)
Virology
, vol.384
, pp. 201-208
-
-
Rubach, J.K.1
Wasik, B.R.2
Rupp, J.C.3
Kuhn, R.J.4
Hardy, R.W.5
Smith, J.L.6
-
20
-
-
0142211312
-
Regulation of the sequential processing of Semliki Forest virus replicase polyprotein
-
Vasiljeva L, Merits A, Golubtsov A, Sizemskaja V, Kaariainen L, Ahola T. 2003. Regulation of the sequential processing of Semliki Forest virus replicase polyprotein. J Biol Chem 278:41636-41645. http://dx.doi.org/10.1074/jbc. M307481200.
-
(2003)
J Biol Chem
, vol.278
, pp. 41636-41645
-
-
Vasiljeva, L.1
Merits, A.2
Golubtsov, A.3
Sizemskaja, V.4
Kaariainen, L.5
Ahola, T.6
-
21
-
-
0027475009
-
Roles of nonstructural polyproteins and cleavage products in regulating Sindbis virus RNA replication and transcription
-
Lemm JA, Rice CM. 1993. Roles of nonstructural polyproteins and cleavage products in regulating Sindbis virus RNA replication and transcription. J Virol 67:1916-1926.
-
(1993)
J Virol
, vol.67
, pp. 1916-1926
-
-
Lemm, J.A.1
Rice, C.M.2
-
22
-
-
0025513605
-
Product review. New mammalian expression vectors
-
Moss B, Elroy-Stein O, Mizukami T, Alexander WA, Fuerst TR. 1990. Product review. New mammalian expression vectors. Nature 348:91-92.
-
(1990)
Nature
, vol.348
, pp. 91-92
-
-
Moss, B.1
Elroy-Stein, O.2
Mizukami, T.3
Alexander, W.A.4
Fuerst, T.R.5
-
23
-
-
81755182978
-
SH3 domain-mediated recruitment of host cell amphiphysins by alphavirus nsP3 promotes viral RNA replication
-
Neuvonen M, Kazlauskas A, Martikainen M, Hinkkanen A, Ahola T, Saksela K. 2011. SH3 domain-mediated recruitment of host cell amphiphysins by alphavirus nsP3 promotes viral RNA replication. PLoS Pathog 7:e1002383. http://dx.doi.org/10.1371/journal.ppat.1002383.
-
(2011)
PLoS Pathog
, vol.7
-
-
Neuvonen, M.1
Kazlauskas, A.2
Martikainen, M.3
Hinkkanen, A.4
Ahola, T.5
Saksela, K.6
-
24
-
-
0037301423
-
Properly folded nonstructural polyprotein directs the Semliki Forest virus replication complex to the endosomal compartment
-
Salonen A, Vasiljeva L, Merits A, Magden J, Jokitalo E, Kaariainen L. 2003. Properly folded nonstructural polyprotein directs the Semliki Forest virus replication complex to the endosomal compartment. J Virol 77: 1691-1702. http://dx.doi.org/10.1128/JVI.77.3.1691-1702.2003.
-
(2003)
J Virol
, vol.77
, pp. 1691-1702
-
-
Salonen, A.1
Vasiljeva, L.2
Merits, A.3
Magden, J.4
Jokitalo, E.5
Kaariainen, L.6
-
25
-
-
0024421374
-
Processing the nonstructural polyproteins of Sindbis virus: nonstructural proteinase is in the C-terminal half of nsP2 and functions both in cis and in trans
-
Hardy WR, Strauss JH. 1989. Processing the nonstructural polyproteins of Sindbis virus: nonstructural proteinase is in the C-terminal half of nsP2 and functions both in cis and in trans. J Virol 63:4653-4664.
-
(1989)
J Virol
, vol.63
, pp. 4653-4664
-
-
Hardy, W.R.1
Strauss, J.H.2
-
26
-
-
2542484464
-
Regulation of Semliki Forest virusRNAreplication: a model for the control of alphavirus pathogenesis in invertebrate hosts
-
Kim KH, Rumenapf T, Strauss EG, Strauss JH. 2004. Regulation of Semliki Forest virusRNAreplication: a model for the control of alphavirus pathogenesis in invertebrate hosts. Virology 323:153-163. http://dx.doi.org/10.1016/j.virol.2004.03.009.
-
(2004)
Virology
, vol.323
, pp. 153-163
-
-
Kim, K.H.1
Rumenapf, T.2
Strauss, E.G.3
Strauss, J.H.4
-
27
-
-
0028221438
-
Polypeptide requirements for assembly of functional Sindbis virus replication complexes: a model for the temporal regulation of minus-and plus-strand RNA synthesis
-
Lemm JA, Rumenapf T, Strauss EG, Strauss JH, Rice CM. 1994. Polypeptide requirements for assembly of functional Sindbis virus replication complexes: a model for the temporal regulation of minus-and plus-strand RNA synthesis. EMBO J 13:2925-2934.
-
(1994)
EMBO J
, vol.13
, pp. 2925-2934
-
-
Lemm, J.A.1
Rumenapf, T.2
Strauss, E.G.3
Strauss, J.H.4
Rice, C.M.5
-
28
-
-
0028319950
-
Alphavirus positive and negative strand RNA synthesis and the role of polyproteins in formation of viral replication complexes
-
Sawicki DL, Sawicki SG. 1994. Alphavirus positive and negative strand RNA synthesis and the role of polyproteins in formation of viral replication complexes. Arch Virol Suppl 9:393-405.
-
(1994)
Arch Virol Suppl
, vol.9
, pp. 393-405
-
-
Sawicki, D.L.1
Sawicki, S.G.2
-
29
-
-
0028040383
-
Alphavirus nsP3 functions to form replication complexes transcribing negative-strand RNA
-
Wang YF, Sawicki SG, Sawicki DL. 1994. Alphavirus nsP3 functions to form replication complexes transcribing negative-strand RNA. J Virol 68: 6466-6475.
-
(1994)
J Virol
, vol.68
, pp. 6466-6475
-
-
Wang, Y.F.1
Sawicki, S.G.2
Sawicki, D.L.3
-
30
-
-
0033803247
-
Helicase and capping enzyme active site mutations in brome mosaic virus protein 1a cause defects in template recruitment, negative-strand RNA synthesis, and viral RNA capping
-
Ahola T, den Boon JA, Ahlquist P. 2000. Helicase and capping enzyme active site mutations in brome mosaic virus protein 1a cause defects in template recruitment, negative-strand RNA synthesis, and viral RNA capping. J Virol 74:8803-8811. http://dx.doi.org/10.1128/JVI.74.19.8803-8811.2000.
-
(2000)
J Virol
, vol.74
, pp. 8803-8811
-
-
Ahola, T.1
den Boon, J.A.2
Ahlquist, P.3
-
31
-
-
0026793857
-
Conservation of the putative methyltransferase domain: a hallmark of the 'Sindbis-like' supergroup of positive-strand RNA viruses
-
Rozanov MN, Koonin EV, Gorbalenya AE. 1992. Conservation of the putative methyltransferase domain: a hallmark of the 'Sindbis-like' supergroup of positive-strand RNA viruses. J Gen Virol 73(Pt 8):2129-2134. http://dx.doi.org/10.1099/0022-1317-73-8-2129.
-
(1992)
J Gen Virol
, vol.73
, pp. 2129-2134
-
-
Rozanov, M.N.1
Koonin, E.V.2
Gorbalenya, A.E.3
-
32
-
-
84926610921
-
Sequence analysis reveals a conserved extension in the capping enzyme of the alphavirus supergroup, and a homologous domain in nodaviruses
-
Ahola T, Karlin DG. 2015. Sequence analysis reveals a conserved extension in the capping enzyme of the alphavirus supergroup, and a homologous domain in nodaviruses. Biol Direct 10:16. http://dx.doi.org/10.1186/s13062-015-0050-0.
-
(2015)
Biol Direct
, vol.10
, pp. 16
-
-
Ahola, T.1
Karlin, D.G.2
-
33
-
-
84945959691
-
Differential phosphatidylinositol-3-kinase-Akt-mTOR activation by Semliki Forest and Chikungunya viruses is dependent on nsP3 and connected to replication complex internalization
-
Thaa B, Biasiotto R, Eng K, Neuvonen M, Gotte B, Rheinemann L, Mutso M, Utt A, Varghese F, Balistreri G, Merits A, Ahola T, McInerney GM. 2015. Differential phosphatidylinositol-3-kinase-Akt-mTOR activation by Semliki Forest and Chikungunya viruses is dependent on nsP3 and connected to replication complex internalization. J Virol 89:11420-11437. http://dx.doi.org/10.1128/JVI.01579-15.
-
(2015)
J Virol
, vol.89
, pp. 11420-11437
-
-
Thaa, B.1
Biasiotto, R.2
Eng, K.3
Neuvonen, M.4
Gotte, B.5
Rheinemann, L.6
Mutso, M.7
Utt, A.8
Varghese, F.9
Balistreri, G.10
Merits, A.11
Ahola, T.12
McInerney, G.M.13
-
34
-
-
0036204740
-
A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids
-
Schwartz M, Chen J, Janda M, Sullivan M, den Boon J, Ahlquist P. 2002. A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids. Mol Cell 9:505-514. http://dx.doi.org/10.1016/S1097-2765(02)00474-4.
-
(2002)
Mol Cell
, vol.9
, pp. 505-514
-
-
Schwartz, M.1
Chen, J.2
Janda, M.3
Sullivan, M.4
den Boon, J.5
Ahlquist, P.6
-
35
-
-
34247574570
-
Nodavirus RNA replication protein a induces membrane association of genomic RNA
-
Van Wynsberghe PM, Chen HR, Ahlquist P. 2007. Nodavirus RNA replication protein a induces membrane association of genomic RNA. J Virol 81:4633-4644. http://dx.doi.org/10.1128/JVI.02267-06.
-
(2007)
J Virol
, vol.81
, pp. 4633-4644
-
-
Van Wynsberghe, P.M.1
Chen, H.R.2
Ahlquist, P.3
-
36
-
-
27144503011
-
Brome mosaic virus 1a nucleoside triphosphatase/helicase domain plays crucial roles in recruiting RNA replication templates
-
Wang X, Lee WM, Watanabe T, Schwartz M, Janda M, Ahlquist P. 2005. Brome mosaic virus 1a nucleoside triphosphatase/helicase domain plays crucial roles in recruiting RNA replication templates. J Virol 79: 13747-13758. http://dx.doi.org/10.1128/JVI.79.21.13747-13758.2005.
-
(2005)
J Virol
, vol.79
, pp. 13747-13758
-
-
Wang, X.1
Lee, W.M.2
Watanabe, T.3
Schwartz, M.4
Janda, M.5
Ahlquist, P.6
-
37
-
-
78649421014
-
Nodavirusinduced membrane rearrangement in replication complex assembly requires replicase protein A, RNAtemplates, and polymerase activity
-
Kopek BG, Settles EW, Friesen PD, Ahlquist P. 2010. Nodavirusinduced membrane rearrangement in replication complex assembly requires replicase protein A, RNAtemplates, and polymerase activity. J Virol 84:12492-12503. http://dx.doi.org/10.1128/JVI.01495-10.
-
(2010)
J Virol
, vol.84
, pp. 12492-12503
-
-
Kopek, B.G.1
Settles, E.W.2
Friesen, P.D.3
Ahlquist, P.4
-
38
-
-
35548988487
-
The transcriptional cycle of HIV-1 in real-time and live cells
-
Boireau S, Maiuri P, Basyuk E, de la Mata M, Knezevich A, Pradet-Balade B, Backer V, Kornblihtt A, Marcello A, Bertrand E. 2007. The transcriptional cycle of HIV-1 in real-time and live cells. J Cell Biol 179: 291-304. http://dx.doi.org/10.1083/jcb.200706018.
-
(2007)
J Cell Biol
, vol.179
, pp. 291-304
-
-
Boireau, S.1
Maiuri, P.2
Basyuk, E.3
de la Mata, M.4
Knezevich, A.5
Pradet-Balade, B.6
Backer, V.7
Kornblihtt, A.8
Marcello, A.9
Bertrand, E.10
-
39
-
-
0347156907
-
Single mRNA molecules demonstrate probabilistic movement in living mammalian cells
-
Fusco D, Accornero N, Lavoie B, Shenoy SM, Blanchard JM, Singer RH, Bertrand E. 2003. Single mRNA molecules demonstrate probabilistic movement in living mammalian cells. Curr Biol 13:161-167. http://dx.doi.org/10.1016/S0960-9822(02)01436-7.
-
(2003)
Curr Biol
, vol.13
, pp. 161-167
-
-
Fusco, D.1
Accornero, N.2
Lavoie, B.3
Shenoy, S.M.4
Blanchard, J.M.5
Singer, R.H.6
Bertrand, E.7
-
40
-
-
84876088090
-
Actin-regulated feedback loop based on Phactr4, PP1 and cofilin maintains the actin monomer pool
-
Huet G, Rajakyla EK, Viita T, Skarp KP, Crivaro M, Dopie J, Vartiainen MK. 2013. Actin-regulated feedback loop based on Phactr4, PP1 and cofilin maintains the actin monomer pool. J Cell Sci 126:497-507. http://dx.doi.org/10.1242/jcs.113241.
-
(2013)
J Cell Sci
, vol.126
, pp. 497-507
-
-
Huet, G.1
Rajakyla, E.K.2
Viita, T.3
Skarp, K.P.4
Crivaro, M.5
Dopie, J.6
Vartiainen, M.K.7
-
41
-
-
37249000008
-
EGFinduced PIP2 hydrolysis releases and activates cofilin locally in carcinoma cells
-
van Rheenen J, Song X, van Roosmalen W, Cammer M, Chen X, Desmarais V, Yip SC, Backer JM, Eddy RJ, Condeelis JS. 2007. EGFinduced PIP2 hydrolysis releases and activates cofilin locally in carcinoma cells. J Cell Biol 179:1247-1259. http://dx.doi.org/10.1083/jcb.200706206.
-
(2007)
J Cell Biol
, vol.179
, pp. 1247-1259
-
-
van Rheenen, J.1
Song, X.2
van Roosmalen, W.3
Cammer, M.4
Chen, X.5
Desmarais, V.6
Yip, S.C.7
Backer, J.M.8
Eddy, R.J.9
Condeelis, J.S.10
|