-
1
-
-
79951588928
-
Microbial extracellular enzymes and the marine carbon cycle
-
Arnosti, C. (2011) Microbial extracellular enzymes and the marine carbon cycle. Ann Rev Mar Sci 3: 401-425.
-
(2011)
Ann Rev Mar Sci
, vol.3
, pp. 401-425
-
-
Arnosti, C.1
-
2
-
-
57449106295
-
Identification of components of electron transport chains in the extremely thermoacidophilic crenarchaeon Metallosphaera sedula through iron and sulfur compound oxidation transcriptomes
-
Auernik, K.S., and Kelly, R.M. (2008) Identification of components of electron transport chains in the extremely thermoacidophilic crenarchaeon Metallosphaera sedula through iron and sulfur compound oxidation transcriptomes. Appl Environ Microbiol 74: 7723-7732.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 7723-7732
-
-
Auernik, K.S.1
Kelly, R.M.2
-
3
-
-
84942291008
-
Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria
-
Baker, B.J., Lazar, C.S., Teske, A.P., and Dick, G.J. (2015) Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria. Microbiome 3: 14.
-
(2015)
Microbiome
, vol.3
, pp. 14
-
-
Baker, B.J.1
Lazar, C.S.2
Teske, A.P.3
Dick, G.J.4
-
4
-
-
33644821142
-
Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru
-
Biddle, J.F., Lipp, J.S., Lever, M.A., Llyod, K.G., Sorensen, K.B., Anderson, R., etal. (2006) Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru. PNAS 103: 3846-3851.
-
(2006)
PNAS
, vol.103
, pp. 3846-3851
-
-
Biddle, J.F.1
Lipp, J.S.2
Lever, M.A.3
Llyod, K.G.4
Sorensen, K.B.5
Anderson, R.6
-
5
-
-
48749117805
-
Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment
-
Biddle, J.F., Fitz-Gibbon, S., Schuster, S.C., Brenchley, J.E., and House, C.H. (2008) Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment. PNAS 105: 10583-10588.
-
(2008)
PNAS
, vol.105
, pp. 10583-10588
-
-
Biddle, J.F.1
Fitz-Gibbon, S.2
Schuster, S.C.3
Brenchley, J.E.4
House, C.H.5
-
6
-
-
0028603326
-
Metabolism of methanogens
-
Blaut, M. (1994) Metabolism of methanogens. A Van Leeuw 66: 187-208.
-
(1994)
A Van Leeuw
, vol.66
, pp. 187-208
-
-
Blaut, M.1
-
7
-
-
84896282192
-
Carbohydrate metabolism in Archaea: Current insights into unusual enzymes and pathways and their regulation
-
Bräsen, C., Esser, D., Rauch, B., and Siebers, B. (2014) Carbohydrate metabolism in Archaea: Current insights into unusual enzymes and pathways and their regulation. Microbiol Mol Biol Rev 78: 89-175.
-
(2014)
Microbiol Mol Biol Rev
, vol.78
, pp. 89-175
-
-
Bräsen, C.1
Esser, D.2
Rauch, B.3
Siebers, B.4
-
8
-
-
84871712835
-
Energy conservation via electron bifurcating ferredoxin reduction and proton/Na+ translocating ferredoxin oxidation
-
Buckel, W., and Thauer, R.K. (2013) Energy conservation via electron bifurcating ferredoxin reduction and proton/Na+ translocating ferredoxin oxidation. Biochim Biophys 1827: 94-113.
-
(2013)
Biochim Biophys
, vol.1827
, pp. 94-113
-
-
Buckel, W.1
Thauer, R.K.2
-
9
-
-
84883287892
-
Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment
-
Castelle, C.J., Hug, L.A., Wrighton, K.C., Thomas, B.C., Williams, K.H., Wu, D., etal. (2013) Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment. Nat Commun 4: 2120.
-
(2013)
Nat Commun
, vol.4
, pp. 2120
-
-
Castelle, C.J.1
Hug, L.A.2
Wrighton, K.C.3
Thomas, B.C.4
Williams, K.H.5
Wu, D.6
-
10
-
-
0036225848
-
The roles of the polytopic membrane proteins NarK, NarU and NirC in Escherichia coli K-12: two nitrate and three nitrite transporters
-
Clegg, S., Yu, F., Griffiths, L., and Cole, J.A. (2002) The roles of the polytopic membrane proteins NarK, NarU and NirC in Escherichia coli K-12: two nitrate and three nitrite transporters. Mol Microbiol 44: 143-155.
-
(2002)
Mol Microbiol
, vol.44
, pp. 143-155
-
-
Clegg, S.1
Yu, F.2
Griffiths, L.3
Cole, J.A.4
-
11
-
-
0023425517
-
An extremely thermostable extracellular proteinase from a strain of the archaebacterium Desulfurococcus growing at 88 °C
-
Cowan, D.A., Smolenski, K.A., Daniel, R.M., and Morgan, H.W. (1987) An extremely thermostable extracellular proteinase from a strain of the archaebacterium Desulfurococcus growing at 88 °C. Biochem J 247: 121-133.
-
(1987)
Biochem J
, vol.247
, pp. 121-133
-
-
Cowan, D.A.1
Smolenski, K.A.2
Daniel, R.M.3
Morgan, H.W.4
-
12
-
-
77954403053
-
BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments
-
Criscuolo, A., and Gribaldo, S. (2010) BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments. BMC Evol Biol 10: 210.
-
(2010)
BMC Evol Biol
, vol.10
, pp. 210
-
-
Criscuolo, A.1
Gribaldo, S.2
-
13
-
-
78649275431
-
Halogeometricum rufum sp. nov., a halophilic archaeon from a marine solar saltern, and emended description of the genus Halogeometricum
-
Cui, H.-L., Yang, X., Gao, X., Li, X.-Y., Xu, X.-W., Zhou, Y.-G., etal. (2010) Halogeometricum rufum sp. nov., a halophilic archaeon from a marine solar saltern, and emended description of the genus Halogeometricum. Int J Syst Evol Microbiol 60: 2613-2617.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 2613-2617
-
-
Cui, H.-L.1
Yang, X.2
Gao, X.3
Li, X.-Y.4
Xu, X.-W.5
Zhou, Y.-G.6
-
14
-
-
70350015324
-
Community-wide analysis of microbial genome sequence signatures
-
Dick, G.J., Andersson, A.F., Baker, B.J., Simmons, S.L., Thomas, B.C., Yelton, A.P., and Banfield, J.F. (2009) Community-wide analysis of microbial genome sequence signatures. Biology 10: R85.
-
(2009)
Biology
, vol.10
, pp. R85
-
-
Dick, G.J.1
Andersson, A.F.2
Baker, B.J.3
Simmons, S.L.4
Thomas, B.C.5
Yelton, A.P.6
Banfield, J.F.7
-
15
-
-
84867649459
-
Archaea in organic-lean and organic-rich marine subsurface sediments: an environmental gradient reflected in distinct lineages
-
Durbin, A.M., and Teske, A. (2012) Archaea in organic-lean and organic-rich marine subsurface sediments: an environmental gradient reflected in distinct lineages. Front Microbiol 3: 168.
-
(2012)
Front Microbiol
, vol.3
, pp. 168
-
-
Durbin, A.M.1
Teske, A.2
-
16
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
17
-
-
84944739223
-
Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
-
Evans, P.N., Parks, D.H., Chadwick, G.L., Robbins, S.J., Orphan, V.J., Golding, S.D., and Tyson, G.W. (2015) Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics. Science 350: 434-438.
-
(2015)
Science
, vol.350
, pp. 434-438
-
-
Evans, P.N.1
Parks, D.H.2
Chadwick, G.L.3
Robbins, S.J.4
Orphan, V.J.5
Golding, S.D.6
Tyson, G.W.7
-
18
-
-
0018673497
-
Early oxidation of organic matter in pelagic sediments of the eastern equatorial Atlantic: suboxic diagenesis
-
Froelich, P.N., Klinkhammer, G.P., Blender, M.L., Luedtke, N.A., Heath, G.R., Cullen, D., etal. (1979) Early oxidation of organic matter in pelagic sediments of the eastern equatorial Atlantic: suboxic diagenesis. Geochim Cosmochim Acta 43: 1075-1090.
-
(1979)
Geochim Cosmochim Acta
, vol.43
, pp. 1075-1090
-
-
Froelich, P.N.1
Klinkhammer, G.P.2
Blender, M.L.3
Luedtke, N.A.4
Heath, G.R.5
Cullen, D.6
-
19
-
-
27744470399
-
Formaldehyde activating enzyme (Fae) and hexulose-6-phosphate synthase (Hps) in Methanosarcina barkeri: a possible function in ribose-5-phosphate biosynthesis
-
Goenrich, M., Thauer, R.K., Yurimoto, H., and Kato, N. (2005) Formaldehyde activating enzyme (Fae) and hexulose-6-phosphate synthase (Hps) in Methanosarcina barkeri: a possible function in ribose-5-phosphate biosynthesis. Arch Microbiol 184: 41-48.
-
(2005)
Arch Microbiol
, vol.184
, pp. 41-48
-
-
Goenrich, M.1
Thauer, R.K.2
Yurimoto, H.3
Kato, N.4
-
20
-
-
2142697116
-
Energy-converting [NiFe] hydrogenases from Archaea and extremophiles: ancestors of complex I
-
Hedderich, R. (2004) Energy-converting [NiFe] hydrogenases from Archaea and extremophiles: ancestors of complex I. J Bioenerg Biomembr 36: 65-75.
-
(2004)
J Bioenerg Biomembr
, vol.36
, pp. 65-75
-
-
Hedderich, R.1
-
21
-
-
0242498430
-
Structure and function of enzymes of the Leloir pathway for galactose metabolism
-
Holden, H.M., Rayment, I., and Thoden, J.B. (2003) Structure and function of enzymes of the Leloir pathway for galactose metabolism. J Biol Chem 278: 43885-43888.
-
(2003)
J Biol Chem
, vol.278
, pp. 43885-43888
-
-
Holden, H.M.1
Rayment, I.2
Thoden, J.B.3
-
22
-
-
84865727174
-
The unusual cell biology of the hyperthermophilic Crenarchaeon Ignicoccus hospitalis
-
Huber, H., Küper, U., Daxer, S., and Rachel, R. (2012) The unusual cell biology of the hyperthermophilic Crenarchaeon Ignicoccus hospitalis. A Van Leeuw 102: 203-219.
-
(2012)
A Van Leeuw
, vol.102
, pp. 203-219
-
-
Huber, H.1
Küper, U.2
Daxer, S.3
Rachel, R.4
-
23
-
-
0028290650
-
A seven-gene operon essential for formate-dependent nitrite reduction to ammonia by enteric bacteria
-
Hussain, H., Grove, J., Griffiths, L., Busby, S., and Cole, J. (1994) A seven-gene operon essential for formate-dependent nitrite reduction to ammonia by enteric bacteria. Mol Microbiol 12: 153-163.
-
(1994)
Mol Microbiol
, vol.12
, pp. 153-163
-
-
Hussain, H.1
Grove, J.2
Griffiths, L.3
Busby, S.4
Cole, J.5
-
24
-
-
0025677844
-
Variations in sedimentary carbon remineralization rates in the White Oak River estuary, North Carolina
-
Kelley, C.A., Martens, C.S., and Chanton, J.P. (1990) Variations in sedimentary carbon remineralization rates in the White Oak River estuary, North Carolina. Limnol Oceanogr 35: 372-383.
-
(1990)
Limnol Oceanogr
, vol.35
, pp. 372-383
-
-
Kelley, C.A.1
Martens, C.S.2
Chanton, J.P.3
-
25
-
-
77955610491
-
Clostridium ljungdahlii represents a microbial production platform based on syngas
-
Köpke, M., Held, C., Hujer, S., Liesegang, H., Wiezer, A., Wollherr, A., etal. (2010) Clostridium ljungdahlii represents a microbial production platform based on syngas. PNAS 107: 13087-13092.
-
(2010)
PNAS
, vol.107
, pp. 13087-13092
-
-
Köpke, M.1
Held, C.2
Hujer, S.3
Liesegang, H.4
Wiezer, A.5
Wollherr, A.6
-
26
-
-
84867745042
-
Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments
-
Kubo, K., Lloyd, K.G., Biddle, J.F., Amann, R., Teske, A., and Knittel, K. (2012) Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments. ISME J 6: 1949-1965.
-
(2012)
ISME J
, vol.6
, pp. 1949-1965
-
-
Kubo, K.1
Lloyd, K.G.2
Biddle, J.F.3
Amann, R.4
Teske, A.5
Knittel, K.6
-
27
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin, M.A., Blackshields, G., Brown, N.P., Chenna, R., McGettigan, P.A., McWilliam, H., etal. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
-
28
-
-
84937042918
-
Environmental controls on intragroup diversity of the uncultured benthic archaea of the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA)
-
Lazar, C.S., Biddle, J.F., Meador, T.B., Blair, N., Hinrichs, K.-U., and Teske, A.P. (2015) Environmental controls on intragroup diversity of the uncultured benthic archaea of the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA). Environ Microbiol 17: 2228-2238.
-
(2015)
Environ Microbiol
, vol.17
, pp. 2228-2238
-
-
Lazar, C.S.1
Biddle, J.F.2
Meador, T.B.3
Blair, N.4
Hinrichs, K.-U.5
Teske, A.P.6
-
29
-
-
77949555357
-
Acetogenesis in deep subseafloor sediments of the Juan de Fuca ridge flank: a synthesis of geochemical, thermodynamic, and gene-based evidence
-
Lever, M.A., Heuer, V.B., Morono, Y., Masui, N., Schmidt, F., Alperin, M.J., etal. (2010) Acetogenesis in deep subseafloor sediments of the Juan de Fuca ridge flank: a synthesis of geochemical, thermodynamic, and gene-based evidence. Geomicrobiol J 27: 183-211.
-
(2010)
Geomicrobiol J
, vol.27
, pp. 183-211
-
-
Lever, M.A.1
Heuer, V.B.2
Morono, Y.3
Masui, N.4
Schmidt, F.5
Alperin, M.J.6
-
30
-
-
84874978260
-
Evidence for microbial carbon and sulfur cycling in deeply buried ridge flank basalt
-
Lever, M.A., Rouxel, O., Alt, J.C., Shimizu, N., Ono, S., Coggon, R.M., etal. (2013) Evidence for microbial carbon and sulfur cycling in deeply buried ridge flank basalt. Science 339: 1305-1308.
-
(2013)
Science
, vol.339
, pp. 1305-1308
-
-
Lever, M.A.1
Rouxel, O.2
Alt, J.C.3
Shimizu, N.4
Ono, S.5
Coggon, R.M.6
-
31
-
-
84876487837
-
Assessing production of the ubiquitous archaeal diglycosyl tetraether lipids in marine subsurface sediment using intramolecular stable isotope probing
-
Lin, Y.-S., Lipp, J.S., Elvert, M., Holler, T., and Hinrichs, K.-U. (2012) Assessing production of the ubiquitous archaeal diglycosyl tetraether lipids in marine subsurface sediment using intramolecular stable isotope probing. Environ Microbiol 15: 1634-1646.
-
(2012)
Environ Microbiol
, vol.15
, pp. 1634-1646
-
-
Lin, Y.-S.1
Lipp, J.S.2
Elvert, M.3
Holler, T.4
Hinrichs, K.-U.5
-
32
-
-
50049107012
-
Significant contribution of Archaea to extant biomass in marine subsurface sediments
-
Lipp, J.S., Morono, Y., Inagaki, F., and Hinrichs, K.-U. (2008) Significant contribution of Archaea to extant biomass in marine subsurface sediments. Nature 454: 991-994.
-
(2008)
Nature
, vol.454
, pp. 991-994
-
-
Lipp, J.S.1
Morono, Y.2
Inagaki, F.3
Hinrichs, K.-U.4
-
33
-
-
80052627969
-
Environmental evidence for net methane production and oxidation in putative ANaerobic MEthanotrophic (ANME) archaea
-
Lloyd, K.G., Alperin, M.J., and Teske, A. (2011) Environmental evidence for net methane production and oxidation in putative ANaerobic MEthanotrophic (ANME) archaea. Environ Microbiol 13: 2548-2564.
-
(2011)
Environ Microbiol
, vol.13
, pp. 2548-2564
-
-
Lloyd, K.G.1
Alperin, M.J.2
Teske, A.3
-
34
-
-
84876291747
-
Predominant archaea in marine sediments degrade detrital proteins
-
Lloyd, K.G., Schreiber, L., Petersen, D.G., Kjeldsen, K.U., Lever, M.A., Steen, A.D., etal. (2013) Predominant archaea in marine sediments degrade detrital proteins. Nature 496: 215-218.
-
(2013)
Nature
, vol.496
, pp. 215-218
-
-
Lloyd, K.G.1
Schreiber, L.2
Petersen, D.G.3
Kjeldsen, K.U.4
Lever, M.A.5
Steen, A.D.6
-
35
-
-
2542523843
-
ARB: a software environment for sequence data
-
Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, etal. (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32: 1363-1371.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Yadhukumar6
-
36
-
-
0034664991
-
Tetrahydrofolate and tetrahydromethanopterin compared: functionally distinct carriers in C1 metabolism
-
Maden, B.E.H. (2000) Tetrahydrofolate and tetrahydromethanopterin compared: functionally distinct carriers in C1 metabolism. Biochem J 350: 609-629.
-
(2000)
Biochem J
, vol.350
, pp. 609-629
-
-
Maden, B.E.H.1
-
37
-
-
1642295867
-
Two distinct heterodisulfide reductase-like enzymes in the sulfate-reducing archaeon Archaeoglobus profundus
-
Mander, G.J., Pierik, A.J., Huber, H., and Hedderich, R. (2004) Two distinct heterodisulfide reductase-like enzymes in the sulfate-reducing archaeon Archaeoglobus profundus. Eur J Biochem 271: 1106-1116.
-
(2004)
Eur J Biochem
, vol.271
, pp. 1106-1116
-
-
Mander, G.J.1
Pierik, A.J.2
Huber, H.3
Hedderich, R.4
-
38
-
-
84862024797
-
IMG/M: the integrated metagenome data management and comparative analysis system
-
Markowitz, V.M., Chen, I.-M.A., Chu, K., Szeto, E., Palaniappan, K., Grechkin, Y., etal. (2012) IMG/M: the integrated metagenome data management and comparative analysis system. Nucleic Acids Res 40: D123-D129.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. D123-D129
-
-
Markowitz, V.M.1
Chen, I.-M.2
Chu, K.3
Szeto, E.4
Palaniappan, K.5
Grechkin, Y.6
-
39
-
-
84930233392
-
The archaeal lipidome in estuarine sediment dominated by members of the Miscellaneous Crenarchaeotal Group
-
Meador, T.B., Bowles, M., Lazar, C.S., Zhu, C., Teske, A., and Hinrichs, K.-U. (2015) The archaeal lipidome in estuarine sediment dominated by members of the Miscellaneous Crenarchaeotal Group. Environ Microbiol 17: 2441-2458.
-
(2015)
Environ Microbiol
, vol.17
, pp. 2441-2458
-
-
Meador, T.B.1
Bowles, M.2
Lazar, C.S.3
Zhu, C.4
Teske, A.5
Hinrichs, K.-U.6
-
40
-
-
84894363922
-
Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses
-
Meng, J., Xu, J., Qin, D., He, Y., Xiao, X., and Wang, F. (2014) Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses. ISME J 8: 650-659.
-
(2014)
ISME J
, vol.8
, pp. 650-659
-
-
Meng, J.1
Xu, J.2
Qin, D.3
He, Y.4
Xiao, X.5
Wang, F.6
-
41
-
-
84922362345
-
IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies
-
Nguyen, L.-T., Schmidt, H.A., von Haeseler, A., and Minh, B.Q. (2014) IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol 32: 268-274.
-
(2014)
Mol Biol Evol
, vol.32
, pp. 268-274
-
-
Nguyen, L.-T.1
Schmidt, H.A.2
von Haeseler, A.3
Minh, B.Q.4
-
42
-
-
0025128277
-
Different physiological roles of two independent pathways for nitrite reduction to ammonia by enteric bacteria
-
Page, L., Griffiths, L., and Cole, J.A. (1990) Different physiological roles of two independent pathways for nitrite reduction to ammonia by enteric bacteria. Arch Microbiol 154: 349-354.
-
(1990)
Arch Microbiol
, vol.154
, pp. 349-354
-
-
Page, L.1
Griffiths, L.2
Cole, J.A.3
-
43
-
-
22944465797
-
Deep sub-seafloor prokaryotes stimulated at interfaces aver geological times
-
Parkes, R.J., Webster, G., Cragg, B.A., Weightman, A.J., Newberry, C.J., Ferdelman, T.G., etal. (2005) Deep sub-seafloor prokaryotes stimulated at interfaces aver geological times. Nature 436: 390-394.
-
(2005)
Nature
, vol.436
, pp. 390-394
-
-
Parkes, R.J.1
Webster, G.2
Cragg, B.A.3
Weightman, A.J.4
Newberry, C.J.5
Ferdelman, T.G.6
-
44
-
-
84926495796
-
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
-
Parks, D.H., Imelfort, M., Skennerton, C.T., Hugenholtz, P., and Tyson, G.W. (2014) CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes. PeerJ 2: e554v551.
-
(2014)
PeerJ
, vol.2
-
-
Parks, D.H.1
Imelfort, M.2
Skennerton, C.T.3
Hugenholtz, P.4
Tyson, G.W.5
-
45
-
-
0034882854
-
The fla gene cluster is involved in the biogenesis of flagella in Halobacterium salinarum
-
Patenge, N., Berendes, A., Engelhardt, H., Schuster, S.C., and Oesterhelt, D. (2001) The fla gene cluster is involved in the biogenesis of flagella in Halobacterium salinarum. Mol Microbiol 41: 653-663.
-
(2001)
Mol Microbiol
, vol.41
, pp. 653-663
-
-
Patenge, N.1
Berendes, A.2
Engelhardt, H.3
Schuster, S.C.4
Oesterhelt, D.5
-
46
-
-
84861760530
-
IDBA-UD: a de novo assembler for single-cell and metagenomics sequencing data with highly uneven depth
-
Peng, Y., Leung, H.C.M., Yiu, S.M., and Chin, F.Y.L. (2012) IDBA-UD: a de novo assembler for single-cell and metagenomics sequencing data with highly uneven depth. Bioinformatics 28: 1420-1428.
-
(2012)
Bioinformatics
, vol.28
, pp. 1420-1428
-
-
Peng, Y.1
Leung, H.C.M.2
Yiu, S.M.3
Chin, F.Y.L.4
-
47
-
-
84961479612
-
Carbon isotope fractionation by autotrophic bacteria with three different C 02 fixation pathways
-
Preuß, A., Schauder, R., Fuchs, G., and Stichler, W. (1989) Carbon isotope fractionation by autotrophic bacteria with three different C 02 fixation pathways. Z Naturforsch 44: 397-402.
-
(1989)
Z Naturforsch
, vol.44
, pp. 397-402
-
-
Preuß, A.1
Schauder, R.2
Fuchs, G.3
Stichler, W.4
-
48
-
-
54949153045
-
Acetogenesis and the Wood-Ljungdahl pathway of CO2 fixation
-
Ragsdale, S.W., and Pierce, E. (2008) Acetogenesis and the Wood-Ljungdahl pathway of CO2 fixation. Biochim Biophys 1784: 1873-1898.
-
(2008)
Biochim Biophys
, vol.1784
, pp. 1873-1898
-
-
Ragsdale, S.W.1
Pierce, E.2
-
49
-
-
84873396448
-
Molecular tools for the detection of nitrogen cycling archaea
-
Rusch, A. (2013) Molecular tools for the detection of nitrogen cycling archaea. Archaea 213: 676450.
-
(2013)
Archaea
, vol.213
, pp. 676450
-
-
Rusch, A.1
-
50
-
-
0037934657
-
A simple energy-conserving system: proton reduction coupled to proton translocation
-
Sapra, R., Bagramyan, K., and Adams, M.W.W. (2003) A simple energy-conserving system: proton reduction coupled to proton translocation. PNAS 100: 7545-7550.
-
(2003)
PNAS
, vol.100
, pp. 7545-7550
-
-
Sapra, R.1
Bagramyan, K.2
Adams, M.W.W.3
-
51
-
-
0003688056
-
Oxidative and reductive acetyl CoA/carbon monoxide dehydrogenase pathway in Desulfobacterium autotrophicum
-
Schauder, R., Preu, A., Jetten, M., and Fuchs, G. (1989) Oxidative and reductive acetyl CoA/carbon monoxide dehydrogenase pathway in Desulfobacterium autotrophicum. Arch Microbiol 151: 84-89.
-
(1989)
Arch Microbiol
, vol.151
, pp. 84-89
-
-
Schauder, R.1
Preu, A.2
Jetten, M.3
Fuchs, G.4
-
52
-
-
84903376499
-
Crenarchaeal heterotrophy in salt marsh sediments
-
Seyler, L.M., McGuinness, L.M., and Kerkhof, L.J. (2014) Crenarchaeal heterotrophy in salt marsh sediments. ISME J 8: 1534-1543.
-
(2014)
ISME J
, vol.8
, pp. 1534-1543
-
-
Seyler, L.M.1
McGuinness, L.M.2
Kerkhof, L.J.3
-
53
-
-
84871956840
-
Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization
-
Sharon, I., Morowitz, M.J., Thomas, B.C., Costello, E.K., Relman, D.A., and Banfield, J.F. (2013) Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization. Genome Res 23: 111-120.
-
(2013)
Genome Res
, vol.23
, pp. 111-120
-
-
Sharon, I.1
Morowitz, M.J.2
Thomas, B.C.3
Costello, E.K.4
Relman, D.A.5
Banfield, J.F.6
-
54
-
-
0036024581
-
Enzymology and bioenergetics of respiratory nitrite ammonification
-
Simon, J. (2002) Enzymology and bioenergetics of respiratory nitrite ammonification. FEMS Microbiol Rev 26: 285-309.
-
(2002)
FEMS Microbiol Rev
, vol.26
, pp. 285-309
-
-
Simon, J.1
-
55
-
-
36249021315
-
Genome-wide experimental determination of barriers to horizontal gene transfer
-
Sorek, R., Zhu, Y., Creevey, C.J., Francino, M.P., Bork, P., and Rubin, E.M. (2007) Genome-wide experimental determination of barriers to horizontal gene transfer. Science 318: 1449-1452.
-
(2007)
Science
, vol.318
, pp. 1449-1452
-
-
Sorek, R.1
Zhu, Y.2
Creevey, C.J.3
Francino, M.P.4
Bork, P.5
Rubin, E.M.6
-
56
-
-
78649879980
-
Sedimentary membrane lipids recycled by deep-sea benthic archaea
-
Takano, Y., Chikaraishi, Y., Ogawa, N.O., Nomaki, H., Morono, Y., Inagaki, F., etal. (2010) Sedimentary membrane lipids recycled by deep-sea benthic archaea. Nature 3: 858-861.
-
(2010)
Nature
, vol.3
, pp. 858-861
-
-
Takano, Y.1
Chikaraishi, Y.2
Ogawa, N.O.3
Nomaki, H.4
Morono, Y.5
Inagaki, F.6
-
57
-
-
34547781750
-
MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura, K., Dudley, J., Nei, M., and Kumar, S. (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
58
-
-
84930816939
-
ProDeGe: a computational protocol for fully automated decontamination of genomes
-
Tennessen, K., Andersen, E., Clingenpeel, S., Rinke, C., Lundberg, D.S., Han, J., etal. (2015) ProDeGe: a computational protocol for fully automated decontamination of genomes. ISME J. doi:10.1038/ismej.2015.100.
-
(2015)
ISME J
-
-
Tennessen, K.1
Andersen, E.2
Clingenpeel, S.3
Rinke, C.4
Lundberg, D.S.5
Han, J.6
-
59
-
-
41149093627
-
Uncultured archaea in deep marine subsurface sediments: have we caught them all?
-
Teske, A., and Sorensen, K.B. (2008) Uncultured archaea in deep marine subsurface sediments: have we caught them all? ISME J 2: 3-18.
-
(2008)
ISME J
, vol.2
, pp. 3-18
-
-
Teske, A.1
Sorensen, K.B.2
-
60
-
-
47549119041
-
Methanogenic archaea: ecologically relevant differences in energy conservation
-
Thauer, R.K., Kaster, A.-K., Seedorf, H., Buckel, W., and Hedderich, R. (2008) Methanogenic archaea: ecologically relevant differences in energy conservation. Nat Rev 6: 579-591.
-
(2008)
Nat Rev
, vol.6
, pp. 579-591
-
-
Thauer, R.K.1
Kaster, A.-K.2
Seedorf, H.3
Buckel, W.4
Hedderich, R.5
-
61
-
-
71549150951
-
Hydrogenase 2 is most and hydrogenase 1 is less responsible for H2 production by Escherichia coli under glycerol fermentation at neutral and slightly alkaline pH
-
Trchounian, K., and Trchounian, A. (2009) Hydrogenase 2 is most and hydrogenase 1 is less responsible for H2 production by Escherichia coli under glycerol fermentation at neutral and slightly alkaline pH. Int J of Hydrogen Energy 34: 8839-8845.
-
(2009)
Int J of Hydrogen Energy
, vol.34
, pp. 8839-8845
-
-
Trchounian, K.1
Trchounian, A.2
-
62
-
-
0027337482
-
Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum
-
Volkl, P., Huber, R., Drobner, E., Rachel, R., Burggraf, S., Trincone, A., and Stetter, K.O. (1993) Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum. Appl Environ Microbiol 59: 2918-2926.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 2918-2926
-
-
Volkl, P.1
Huber, R.2
Drobner, E.3
Rachel, R.4
Burggraf, S.5
Trincone, A.6
Stetter, K.O.7
-
63
-
-
15844406532
-
Metabolic flux analysis of Escherichia coli in glucose-limited continuous culture. II. Dynamic response to famine and feast, activation of the methylglyoxal pathway and oscillatory behaviour
-
Weber, J., Kayser, A., and Rinas, U. (2005) Metabolic flux analysis of Escherichia coli in glucose-limited continuous culture. II. Dynamic response to famine and feast, activation of the methylglyoxal pathway and oscillatory behaviour. Microbiology 151: 707-716.
-
(2005)
Microbiology
, vol.151
, pp. 707-716
-
-
Weber, J.1
Kayser, A.2
Rinas, U.3
-
64
-
-
84894028413
-
Gas chromatographic analysis of methanol and ethanol in marine sediment pore waters: validation and implementation of three pretreatment techniques
-
Zhuang, G.-C., Lin, Y.-S., Elvert, M., Heuer, V.B., and Hinrichs, K.-U. (2014) Gas chromatographic analysis of methanol and ethanol in marine sediment pore waters: validation and implementation of three pretreatment techniques. Mar Chem 160: 82-90.
-
(2014)
Mar Chem
, vol.160
, pp. 82-90
-
-
Zhuang, G.-C.1
Lin, Y.-S.2
Elvert, M.3
Heuer, V.B.4
Hinrichs, K.-U.5
-
65
-
-
0030472217
-
Identification of a third secondary carrier (DcuC) for anaerobic C4-dicarboxylate transport in Escherichia coli: roles of the three Dcu carriers in uptake and exchange
-
Zientz, E., Six, S., and Unden, G. (1996) Identification of a third secondary carrier (DcuC) for anaerobic C4-dicarboxylate transport in Escherichia coli: roles of the three Dcu carriers in uptake and exchange. J Bacteriol 178: 7241-7247.
-
(1996)
J Bacteriol
, vol.178
, pp. 7241-7247
-
-
Zientz, E.1
Six, S.2
Unden, G.3
|