Energy-Converting [NiFe] Hydrogenases from Archaea and Extremophiles: Ancestors of Complex I

Journal of Bioenergetics and Biomembranes

Volumn 36, Issue 1, 2004, Pages 65-75

  Hedderich, Reiner ^a  

^a M P Inst Terrestrische Mikrobiol   (Germany)

Author keywords

NiFe hydrogenase; Carbon monoxide dehydrogenase; Complex I; Hydrogen; Iron sulfur proteins; Methanogenic archaea; NADH:quinone oxidoreductase

Indexed keywords

FERREDOXIN; HYDROGEN; HYDROGENASE; MEMBRANE PROTEIN; NICKEL IRON HYDROGENASE; POLYFERREDOXIN DERIVATIVE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE (UBIQUINONE); UNCLASSIFIED DRUG;

ARCHAEBACTERIUM; BACTERIAL METABOLISM; CATALYSIS; ELECTRON TRANSPORT; ENERGY CONSERVATION; ENZYME SUBUNIT; HYDROPHILICITY; NONHUMAN; PHOSPHORYLATION; PROTEIN FAMILY; REDUCTION; SHORT SURVEY;

ARCHAEA; CELL MEMBRANE; CONSERVED SEQUENCE; ELECTRON TRANSPORT COMPLEX I; ENERGY TRANSFER; EVOLUTION, MOLECULAR; HALOBACTERIALES; HYDROGENASE; OXIDATION-REDUCTION; SEQUENCE HOMOLOGY, AMINO ACID;

ARCHAEA; BACTERIA (MICROORGANISMS);

EID: 2142697116     PISSN: 0145479X     EISSN: None     Source Type: Journal    
DOI: 10.1023/B:JOBB.0000019599.43969.33     Document Type: Short Survey

References (62)

1. Albracht, S. P., and Hedderich, R. (2000). FEBS Lett. 485, 1-6.
2. Albracht, S. P. J. (1994). Biochim. Biophys. Acta 1188, 167-204.
3. Andrews, S. C., Berks, B. C., McClay, J., Ambler, A., Quail, M. A., Golby, P., and Guest, J. R. (1997). Microbiology 143, 3633-3647.
4. Bao, Q., Tian, Y., Li, W., Xu, Z., Xuan, Z., Hu, S., Dong, W., Yang, J., Chen, Y., Xue, Y., Xu, Y., Lai, X., Huang, L., Dong, X., Ma, Y., Ling, L., Tan, H., Chen, R., Wang, J., Yu, J., and Yang, H. (2002). Genome Res. 12, 689-700.
5. Bertram, P. A., and Thauer, R. K. (1994). Eur. J. Biochem. 226, 811-818.
6. Blokesch, M., Paschos, A., Theodoratou, E., Bauer, A., Hube, M., Huth, S., and Bock, A. (2002). Biochem. Soc. Trans. 30, 674-680.
7. Bock, A. K., Kunow, J., Glasemacher, J., and Schönheit, P. (1996). Eur. J. Biochem. 237, 35-44.
8. Böhm, R., Sauter, M., and Böck, A. (1990). Mol. Microbiol. 4, 231-243.
9. Bonam, D., and Ludden, P. W. (1987). J. Biol. Chem. 262, 2980-2987.
10. Bott, M., Eikmanns, B., and Thauer, R. K. (1986). Eur. J. Biochem. 159, 393-398.
11. Bott, M., and Thauer, R. K. (1989). Eur. J. Biochem. 179, 469-472.
12. Brandt, U., Kerscher, S., Drose, S., Zwicker, K., and Zickermann, V. (2003). FEBS Lett. 545, 9-17.
13. Bult, C. J., White, O., Olsen, G. J., Zhou, L., Fleischmann, R. D., Sutton, G. G., Blake, J. A., FitzGerald, L. M., Clayton, R. A., Gocayne, J. D., Kerlavage, A. R., Dougherty, B. A., Tomb, J. F., Adams, M. D., Reich, C. I., Overbeek, R., Kirkness, E. F., Weinstock, K. G., Merrick, J. M., Glodek, A., Scott, J. L., Geoghagen, N. S. M., and Venter, J. C. (1996). Science 273, 1058-1073.
14. Darrouzet, E., Issartel, J. P., Lunardi, J., and Dupuis, A. (1998). FEBS Lett. 431, 34-38.
15. Deppenmeier, U., Müller, V., and Gottschalk, G. (1996). Arch. Microbiol. 165, 149-163.
16. Dobbek, H., Svetlitchnyi, V., Gremer, L., Huber, R., and Meyer, O. (2001). Science 293, 1281-1285.
17. Drennan, C. L., Heo, J., Sintchak, M. D., Schreiter, E., and Ludden, P. W. (2001). Proc. Natl. Acad. Sci. U.S.A. 98, 11973-11978.
18. Ensign, S. A., and Ludden, P. W. (1991). J. Biol. Chem. 266, 18395-18403.
19. Ferry, J. G. (1997). Biofactors 6, 25-35.
20. Fox, J. D., He, Y., Shelver, D., Roberts, G. P., and Ludden, P. W. (1996b). J. Bacteriol. 178, 6200-6208.
21. Fox, J. D., Kerby, R. L., Roberts, G. P., and Ludden, P. W. (1996a). J. Bacteriol. 178, 1515-1524.
22. Friedrich, T., and Scheide, D. (2000). FEBS Lett. 479, 1-5.
23. Friedrich, T., and Weiss, H. (1997). J. Theor. Biol. 187, 529-540.
24. Garcin, E., Montet, Y., Volbeda, A., Hatchikian, C., Frey, M., and Fontecilla-Camps, J. C. (1998). Biochem. Soc. Trans. 26, 396-401.
25. Hamamoto, T., Hashimoto, M., Hino, M., Kitada, M., Seto, Y., Kudo, T., and Horikoshi, K. (1994). Mol. Microbiol. 14, 939-946.
26. Ingledew, W. J., and Ohnishi, T. (1980). Biochem. J. 186, 111-117.
27. Kaesler, B., and Schönheit, P. (1989a). Eur. J. Biochem. 184, 223-232.
28. Kaesler, B., and Schönheit, P. (1989b). Eur. J. Biochem. 186, 309-316.
29. Kashani-Poor, N., Zwicker, K., Kerscher, S., and Brandt, U. (2001). J. Biol. Chem. 276, 24082-24087.
30. Kerby, R. L., Hong, S. S., Ensign, S. A., Coppoc, L. J., Ludden, P. W., and Roberts, G. P. (1992). J. Bacteriol. 174, 5284-5294.
31. Kerby, R. L., Ludden, P. W., and Roberts, G. P. (1995). J. Bacteriol. 177, 2241-2244.
32. Kerby, R. L., Ludden, P. W., and Roberts, G. P. (1997). J. Bacteriol. 179, 2259-2266,
33. Künkel, A., Vorholt, J. A., Thauer, R. K., and Hedderich, R. (1998). Eur. J. Biochem. 252, 467-476.
34. Kurkin, S., Meuer, J., Koch, J., Hedderich, R., and Albracht, S. P. (2002). Eur. J. Biochem. 269, 6101-6111.
35. Malki, S., Saimmaime, I., De Luca, G., Rousset, M., Dermoun, Z., and Belaich, J. P. (1995). J. Bacteriol. 177, 2628-2636.
36. Meuer, J., Bartoschek, S., Koch, J., Künkel, A., and Hedderich, R. (1999). Eur. J. Biochem. 265, 325-335.
37. Meuer, J., Kuettner, H. C., Zhang, J. K., Hedderich, R., and Metcalf, W. W. (2002). Proc. Natl. Acad. Sci. U.S.A. 99, 5632-5637.
38. Nicolet, Y., Cavazza, C., and Fontecilla-Camps, J. C. (2002). J. Inorg. Biochem. 91, 1-8.
39. Putnoky, P., Kereszt, A., Nakamura, T., Endre, G., Grosskopf, E., Kiss, P., and Kondorosi, A. (1998). Mol. Microbiol. 28, 1091-1101.
40. Sapra, R., Bagramyan, K., and Adams, M. W. (2003). Proc. Natl. Acad. Sci. U.S.A. 100, 7545-7550.
41. Sapra, R., Verhagen, M., and Adams, M. W. W. (2000). J. Bacteriol. 182, 3423-3428.
42. Sauter, M., Böhm, R., and Böck, A. (1992). Mol. Microbiol. 6, 1523-1532.
43. Schwarz, E., and Friedrich, B. (2003). In The Prokaryotes: An Evolving Electronic Resource for the Microbiological Community (Dworkin, M., ed.), Springer, New York. Retrieved from http://141. 150. 157. 117:8080/prokPUB/index.htm
44. Shelver, D., Kerby, R. L., He, Y., and Roberts, G. P. (1997). Proc. Natl. Acad. Sci. U.S.A. 94, 11216-11220.
45. Silva, P. J., van den Ban, E. C., Wassink, H., Haaker, H., de Castro, B., Robb, F. T., and Hagen, W. R. (2000). Eur. J. Biochem. 267, 6541-6551.
46. Skibinski, D. A., Golby, P., Chang, Y. S., Sargent, F., Hoffman, R., Harper, R., Guest, J. R., Attwood, M. M., Berks, B. C., and Andrews, S. C. (2002). J. Bacteriol. 184, 6642-6653.
47. Slesarev, A. I., Mezhevaya, K. V., Makarova, K. S., Polushin, N. N., Shcherbinina, O. V., Shakhova, V. V., Belova, G. I., Aravind, L., Natale, D. A., Rogozin, I. B., Tatusov, R. L., Wolf, Y. I., Stetter, K. O., Malykh, A. G., Koonin, E. V., and Kozyavkin, S. A. (2002). Proc. Natl. Acad. Sci. U.S.A. 99, 4644-4649.
48. Soboh, B., Linder, D., and Hedderich, R. (2002). Eur. J. Biochem. 269, 5712-5721.
49. Svetlichny, V. A., Sokolova, T. G., Gerhardt, M., Ringpfeil, M., Kostrikina, N. A., and Zavarzin, G. A. (1991). Syst. Appl. Microbiol. 14, 254-260.
50. Svetlitchnyi, V., Peschel, C., Acker, G., and Meyer, O. (2001). J. Bacteriol. 183, 5134-5144.
51. Tersteegen, A., and Hedderich, R. (1999). Eur. J. Biochem. 264, 930-943.
52. Thauer, R. K. (1998). Microbiology 144, 2377-2406.
53. Thauer, R. K., Klein, A. R., and Hartmann, G. C. (1996). Chem. Rev. 96, 3031-3042.
54. Tran-Betcke, A., Warnecke, U., Bocker, C., Zaborosch, C., and Friedrich, B. (1990). J. Bacteriol. 172, 2920-2929.
55. Uffen, R. L. (1976). Proc. Natl. Acad. Sci. U.S.A. 73, 3298-3302.
56. Vignais, P. M., Billoud, B., and Meyer, J. (2001). FEMS Microbiol. Rev. 25, 455-501.
57. Volbeda, A., Charon, M. H., Piras, C., Hatchikian, E. C., Frey, M., and Fontecilla-Camps, J. C. (1995). Nature 373, 580-587.
58. Vorholt, J. A., Vaupel, M., and Thauer, R. K. (1996). Eur. J. Biochem. 236, 309-317.
59. Winner, C., and Gottschalk, G. (1989). FEMS Microbiol. Lett. 65, 259-264.
60. Xue, Y., Xu, Y., Liu, Y., Ma, Y., and Zhou, P. (2001). Int. J. Syst. Evol. Microbiol. 51, 1335-1341.
61. Yagi, T., Yano, T., Di Bernardo, S., and Matsuno-Yagi, A. (1998). Biochim. Biophys. Acta 1364, 125-133.
62. Yano, T., and Ohnishi, T. (2001). J. Bioenerg. Biomembr. 33, 213-222.