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Volumn , Issue , 2013, Pages 187-203

Association genetics strategies and resources

Author keywords

Association mapping; Candidate gene; Complex trait dissection; Genetic diversity; Genome wide association study; Linkage disequilibrium; Nested association mapping; Single nucleotide polymorphism; Sorghum diversity panel

Indexed keywords


EID: 84957644783     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-1-4419-5947-8_9     Document Type: Chapter
Times cited : (10)

References (56)
  • 1
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • The Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408:796-815
    • (2000) Nature , vol.408 , pp. 796-815
  • 3
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: Analysis and visualization of LD and haplotype maps
    • Barrett JC, Fry B, Maller J, Daly MJ (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21:263-265
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.C.1    Fry, B.2    Maller, J.3    Daly, M.J.4
  • 4
    • 0031968210 scopus 로고    scopus 로고
    • Growth traits among sorghum genotypes in response to aluminium
    • Bernai JH, Clark RB (1998) Growth traits among sorghum genotypes in response to aluminium. J Plant Nutr 21:297-305
    • (1998) J Plant Nutr , vol.21 , pp. 297-305
    • Bernai, J.H.1    Clark, R.B.2
  • 5
    • 54949113665 scopus 로고    scopus 로고
    • Molecular markers and selection for complex traits in plants: Learning from the last 20 years
    • Bernardo R (2008) Molecular markers and selection for complex traits in plants: learning from the last 20 years. Crop Sci 48:1649-1664
    • (2008) Crop Sci , vol.48 , pp. 1649-1664
    • Bernardo, R.1
  • 7
    • 56049089634 scopus 로고    scopus 로고
    • Efficient mapping of plant height quantitative trait loci in a sorghum association population with introgressed dwarfing genes
    • Brown PJ, Rooney WL, Franks C, Kresovich S (2008) Efficient mapping of plant height quantitative trait loci in a sorghum association population with introgressed dwarfing genes. Genetics 180:629-637
    • (2008) Genetics , vol.180 , pp. 629-637
    • Brown, P.J.1    Rooney, W.L.2    Franks, C.3    Kresovich, S.4
  • 8
    • 79952477798 scopus 로고    scopus 로고
    • Yield performance and adaptation of four sorghum cultivars in Igunga and Nzega districts of Tanzania
    • Bucheyeki TL, Shenkalwa EM, Mapunda TX, Matata LW (2010) Yield performance and adaptation of four sorghum cultivars in Igunga and Nzega districts of Tanzania. Commun Biometry Crop Sci 5:4-10
    • (2010) Commun Biometry Crop Sci , vol.5 , pp. 4-10
    • Bucheyeki, T.L.1    Shenkalwa, E.M.2    Mapunda, T.X.3    Matata, L.W.4
  • 10
    • 48149087802 scopus 로고    scopus 로고
    • Maize and sorghum: Genetic resources for bioenergy grasses
    • Carpita NC, McCann MC (2008) Maize and sorghum: genetic resources for bioenergy grasses. Trends Plant Sci 13:415-420
    • (2008) Trends Plant Sci , vol.13 , pp. 415-420
    • Carpita, N.C.1    McCann, M.C.2
  • 14
    • 33646409268 scopus 로고    scopus 로고
    • A global view of genetic diversity in cultivated sorghums using a core collection
    • Deu M, Rattunde F, Chantereau J (2006) A global view of genetic diversity in cultivated sorghums using a core collection. Genome 49:168-180
    • (2006) Genome , vol.49 , pp. 168-180
    • Deu, M.1    Rattunde, F.2    Chantereau, J.3
  • 19
    • 34547581946 scopus 로고    scopus 로고
    • Sequence variation at candidate loci in the starch metabolism pathway in sorghum: Prospects for linkage disequilibrium mapping
    • Hamblin MT, Fernandez MGS, Tunistra MR, Rooney WL, Kresovich S (2007) Sequence variation at candidate loci in the starch metabolism pathway in sorghum: prospects for linkage disequilibrium mapping. Crop Sci 47:S125-S134
    • (2007) Crop Sci , vol.47 , pp. S125-S134
    • Hamblin, M.T.1    Fernandez, M.G.S.2    Tunistra, M.R.3    Rooney, W.L.4    Kresovich, S.5
  • 20
    • 1842465830 scopus 로고    scopus 로고
    • Comparative population genetics of the panicoid grasses: Sequence polymorphism, linkage disequilibrium and selection in a diverse sample of sorghum bicolor
    • Hamblin MT, Mitchell SE, White GM, Gallego J, Kukatla R, Wing RA, Paterson AH, Kresovich S (2004) Comparative population genetics of the panicoid grasses: sequence polymorphism, linkage disequilibrium and selection in a diverse sample of sorghum bicolor. Genetics 167:471-483
    • (2004) Genetics , vol.167 , pp. 471-483
    • Hamblin, M.T.1    Mitchell, S.E.2    White, G.M.3    Gallego, J.4    Kukatla, R.5    Wing, R.A.6    Paterson, A.H.7    Kresovich, S.8
  • 21
    • 32544443264 scopus 로고    scopus 로고
    • Equilibrium processes cannot explain high levels of short- and medium-range linkage disequilibrium in the domesticated grass Sorghum bicolor
    • Hamblin MT, Salas Fernandez MG, Casa AM, Mitchell SE, Paterson AH, Kresovich S (2005) Equilibrium processes cannot explain high levels of short- and medium-range linkage disequilibrium in the domesticated grass Sorghum bicolor. Genetics 171:1247-1256
    • (2005) Genetics , vol.171 , pp. 1247-1256
    • Hamblin, M.T.1    Salas Fernandez, M.G.2    Casa, A.M.3    Mitchell, S.E.4    Paterson, A.H.5    Kresovich, S.6
  • 23
    • 33847297054 scopus 로고    scopus 로고
    • Genetic architecture of complex traits in plants
    • Holland JB (2007) Genetic architecture of complex traits in plants. Curr Opin Plant Biol 10: 156-161
    • (2007) Curr Opin Plant Biol , vol.10 , pp. 156-161
    • Holland, J.B.1
  • 26
    • 0000864111 scopus 로고
    • Registration of RTx430 sorghum parental line
    • Miller FR (1984) Registration of RTx430 sorghum parental line. Crop Sci 24:1224
    • (1984) Crop Sci , vol.24 , pp. 1224
    • Miller, F.R.1
  • 29
    • 0036468808 scopus 로고    scopus 로고
    • Linkage disequilibrium: What history has to tell us
    • Nordborg M, Tavare S (2002) Linkage disequilibrium: what history has to tell us. Trends Genet 18: 83-90
    • (2002) Trends Genet , vol.18 , pp. 83-90
    • Nordborg, M.1    Tavare, S.2
  • 30
    • 57649121742 scopus 로고    scopus 로고
    • Next-generation genetics in plants
    • Nordborg M, Weigel D (2008) Next-generation genetics in plants. Nature 456:720-723
    • (2008) Nature , vol.456 , pp. 720-723
    • Nordborg, M.1    Weigel, D.2
  • 31
    • 58449137410 scopus 로고    scopus 로고
    • The Sorghum bicolor genome and the diversification of grasses
    • Paterson AH, Bowers JE, Bruggmann R, Dubchak I et al (2009) The Sorghum bicolor genome and the diversification of grasses. Nature 457:551-556
    • (2009) Nature , vol.457 , pp. 551-556
    • Paterson, A.H.1    Bowers, J.E.2    Bruggmann, R.3    Dubchak, I.4
  • 32
    • 0029741063 scopus 로고    scopus 로고
    • The future of genetic studies of complex human diseases
    • Risch N, Merikangas K (1996) The future of genetic studies of complex human diseases. Science 273:1516-1517
    • (1996) Science , vol.273 , pp. 1516-1517
    • Risch, N.1    Merikangas, K.2
  • 34
    • 74549221016 scopus 로고    scopus 로고
    • Genome sequence of the palaeopolyploid soybean
    • Schmutz J, Cannon SB, Schlueter J, Ma J et al (2010) Genome sequence of the palaeopolyploid soybean. Nature 463:178-183
    • (2010) Nature , vol.463 , pp. 178-183
    • Schmutz, J.1    Cannon, S.B.2    Schlueter, J.3    Ma, J.4
  • 35
    • 70450202132 scopus 로고    scopus 로고
    • The B73 maize genome: Complexity, diversity, and dynamics
    • Schnable PS, Ware D, Fulton RS, Stein JC et al (2009) The B73 maize genome: complexity, diversity, and dynamics. Science 326:1112-1115
    • (2009) Science , vol.326 , pp. 1112-1115
    • Schnable, P.S.1    Ware, D.2    Fulton, R.S.3    Stein, J.C.4
  • 36
    • 70349525364 scopus 로고    scopus 로고
    • Genome-wide association mapping of quantitative traits in sorghum (Sorghum bicolor (L.) Moench) by using multiple models
    • Shehzad T, Iwata H, Okuno K (2009a) Genome-wide association mapping of quantitative traits in sorghum (Sorghum bicolor (L.) Moench) by using multiple models. Breed Sci 59:217-227
    • (2009) Breed Sci , vol.59 , pp. 217-227
    • Shehzad, T.1    Iwata, H.2    Okuno, K.3
  • 37
    • 70350000600 scopus 로고    scopus 로고
    • Development of SSR-based sorghum (Sorghum bicolor (L.) Moench) diversity research set of germplasm and its evaluation by morphological traits
    • Shehzad T, Okuizumi H, Kawase M, Okuno K (2009b) Development of SSR-based sorghum (Sorghum bicolor (L.) Moench) diversity research set of germplasm and its evaluation by morphological traits. Genet Resour Crop Evol 56:809-827
    • (2009) Genet Resour Crop Evol , vol.56 , pp. 809-827
    • Shehzad, T.1    Okuizumi, H.2    Kawase, M.3    Okuno, K.4
  • 38
    • 78650644320 scopus 로고    scopus 로고
    • Linkage disequilibrium and association mapping in the Triticeae
    • Feuillet C, Muehlbauer GJ (eds), Springer, New York
    • Sorrells ME, Yu J (2009) Linkage disequilibrium and association mapping in the Triticeae. In: Feuillet C, Muehlbauer GJ (eds) Genetics and genomics of the Triticeae, plant genetics/genomics. Springer, New York, pp 655-684
    • (2009) Genetics and genomics of the Triticeae, plant genetics/genomics , pp. 655-684
    • Sorrells, M.E.1    Yu, J.2
  • 42
    • 42649123990 scopus 로고    scopus 로고
    • Sizing up human height variation
    • Visscher PM (2008) Sizing up human height variation. Nat Genet 40:489-490
    • (2008) Nat Genet , vol.40 , pp. 489-490
    • Visscher, P.M.1
  • 44
    • 13144265739 scopus 로고    scopus 로고
    • Genome-wide association studies: Theoretical and practical concerns
    • Wang WY, Barratt BJ, Clayton DG, Todd JA (2005) Genome-wide association studies: theoretical and practical concerns. Nat Rev Genet 6:109-118
    • (2005) Nat Rev Genet , vol.6 , pp. 109-118
    • Wang, W.Y.1    Barratt, B.J.2    Clayton, D.G.3    Todd, J.A.4
  • 46
    • 79954619021 scopus 로고    scopus 로고
    • The potential of ultrahigh throughput genomic technologies in crop improvement
    • Yu J (2009) The potential of ultrahigh throughput genomic technologies in crop improvement. Plant Genome 2:2
    • (2009) Plant Genome , vol.2 , pp. 2
    • Yu, J.1
  • 47
    • 33744980661 scopus 로고    scopus 로고
    • Genetic association mapping and genome organization of maize
    • Yu J, Buckler ES (2006) Genetic association mapping and genome organization of maize. Curr Opin Biotechnol 17:155-160
    • (2006) Curr Opin Biotechnol , vol.17 , pp. 155-160
    • Yu, J.1    Buckler, E.S.2
  • 48
    • 40849089396 scopus 로고    scopus 로고
    • Genetic design and statistical power of nested association mapping in maize
    • Yu J, Holland JB, McMullen MD, Buckler ES (2008) Genetic design and statistical power of nested association mapping in maize. Genetics 178:539-551
    • (2008) Genetics , vol.178 , pp. 539-551
    • Yu, J.1    Holland, J.B.2    McMullen, M.D.3    Buckler, E.S.4
  • 55
    • 85164502327 scopus 로고    scopus 로고
    • Status and prospects of association mapping in plants
    • Zhu C, Gore MA, Buckler ES, Yu J (2008) Status and prospects of association mapping in plants. Plant Genome 1:5-20
    • (2008) Plant Genome , vol.1 , pp. 5-20
    • Zhu, C.1    Gore, M.A.2    Buckler, E.S.3    Yu, J.4
  • 56
    • 70949086566 scopus 로고    scopus 로고
    • Nonmetric multidimensional scaling corrects for population structure in whole genome association studies
    • Zhu C, Yu J (2009) Nonmetric multidimensional scaling corrects for population structure in whole genome association studies. Genetics 182:875-888
    • (2009) Genetics , vol.182 , pp. 875-888
    • Zhu, C.1    Yu, J.2


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