-
1
-
-
68149162957
-
The ectopic expression of Pax4 in the mouse pancreas converts progenitor cells into alpha and subsequently beta cells
-
Collombat P, Xu X, Ravassard P, Sosa-Pineda B, Dussaud S, Billestrup N, Madsen OD, Serup P, Heimberg H, Mansouri A, (2009) The ectopic expression of Pax4 in the mouse pancreas converts progenitor cells into alpha and subsequently beta cells. Cell 138: 449-462
-
(2009)
Cell
, vol.138
, pp. 449-462
-
-
Collombat, P.1
Xu, X.2
Ravassard, P.3
Sosa-Pineda, B.4
Dussaud, S.5
Billestrup, N.6
Madsen, O.D.7
Serup, P.8
Heimberg, H.9
Mansouri, A.10
-
2
-
-
84920744392
-
Diabetes recovery by age-dependent conversion of pancreatic delta-cells into insulin producers
-
Chera S, Baronnier D, Ghila L, Cigliola V, Jensen JN, Gu G, Furuyama K, Thorel F, Gribble FM, Reimann F, et al, (2014) Diabetes recovery by age-dependent conversion of pancreatic delta-cells into insulin producers. Nature 514: 503-507
-
(2014)
Nature
, vol.514
, pp. 503-507
-
-
Chera, S.1
Baronnier, D.2
Ghila, L.3
Cigliola, V.4
Jensen, J.N.5
Gu, G.6
Furuyama, K.7
Thorel, F.8
Gribble, F.M.9
Reimann, F.10
-
3
-
-
84907222786
-
Global genomic and transcriptomic analysis of human pancreatic islets reveals novel genes influencing glucose metabolism
-
Fadista J, Vikman P, Laakso EO, Mollet IG, Esguerra JL, Taneera J, Storm P, Osmark P, Ladenvall C, Prasad RB, et al, (2014) Global genomic and transcriptomic analysis of human pancreatic islets reveals novel genes influencing glucose metabolism. Proc Natl Acad Sci USA 111: 13924-13929
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, pp. 13924-13929
-
-
Fadista, J.1
Vikman, P.2
Laakso, E.O.3
Mollet, I.G.4
Esguerra, J.L.5
Taneera, J.6
Storm, P.7
Osmark, P.8
Ladenvall, C.9
Prasad, R.B.10
-
4
-
-
84874626174
-
Epigenomic plasticity enables human pancreatic alpha to beta cell reprogramming
-
Bramswig NC, Everett LJ, Schug J, Dorrell C, Liu C, Luo Y, Streeter PR, Naji A, Grompe M, Kaestner KH, (2013) Epigenomic plasticity enables human pancreatic alpha to beta cell reprogramming. J Clin Invest 123: 1275-1284
-
(2013)
J Clin Invest
, vol.123
, pp. 1275-1284
-
-
Bramswig, N.C.1
Everett, L.J.2
Schug, J.3
Dorrell, C.4
Liu, C.5
Luo, Y.6
Streeter, P.R.7
Naji, A.8
Grompe, M.9
Kaestner, K.H.10
-
5
-
-
84891856209
-
Epigenetic regulation of the DLK1-MEG3 microRNA cluster in human type 2 diabetic islets
-
Kameswaran V, Bramswig NC, McKenna LB, Penn M, Schug J, Hand NJ, Chen Y, Choi I, Vourekas A, Won KJ, et al, (2014) Epigenetic regulation of the DLK1-MEG3 microRNA cluster in human type 2 diabetic islets. Cell Metab 19: 135-145
-
(2014)
Cell Metab
, vol.19
, pp. 135-145
-
-
Kameswaran, V.1
Bramswig, N.C.2
McKenna, L.B.3
Penn, M.4
Schug, J.5
Hand, N.J.6
Chen, Y.7
Choi, I.8
Vourekas, A.9
Won, K.J.10
-
6
-
-
84896879217
-
MARIS: Method for analyzing RNA following intracellular sorting
-
Hrvatin S, Deng F, O'Donnell CW, Gifford DK, Melton DA, (2014) MARIS: method for analyzing RNA following intracellular sorting. PLoS One 9: e89459
-
(2014)
PLoS One
, vol.9
, pp. e89459
-
-
Hrvatin, S.1
Deng, F.2
O'Donnell, C.W.3
Gifford, D.K.4
Melton, D.A.5
-
7
-
-
84904517798
-
The transcriptional landscape of mouse beta cells compared to human beta cells reveals notable species differences in long non-coding RNA and protein-coding gene expression
-
Benner C, van der Meulen T, Caceres E, Tigyi K, Donaldson CJ, Huising MO, (2014) The transcriptional landscape of mouse beta cells compared to human beta cells reveals notable species differences in long non-coding RNA and protein-coding gene expression. BMC Genom 15: 620
-
(2014)
BMC Genom
, vol.15
, pp. 620
-
-
Benner, C.1
Van Der Meulen, T.2
Caceres, E.3
Tigyi, K.4
Donaldson, C.J.5
Huising, M.O.6
-
8
-
-
84908312532
-
An integrated cell purification and genomics strategy reveals multiple regulators of pancreas development
-
Benitez CM, Qu K, Sugiyama T, Pauerstein PT, Liu Y, Tsai J, Gu X, Ghodasara A, Arda HE, Zhang J, et al, (2014) An integrated cell purification and genomics strategy reveals multiple regulators of pancreas development. PLoS Genet 10: e1004645
-
(2014)
PLoS Genet
, vol.10
, pp. e1004645
-
-
Benitez, C.M.1
Qu, K.2
Sugiyama, T.3
Pauerstein, P.T.4
Liu, Y.5
Tsai, J.6
Gu, X.7
Ghodasara, A.8
Arda, H.E.9
Zhang, J.10
-
9
-
-
84859463823
-
Chromatin-targeting small molecules cause class-specific transcriptional changes in pancreatic endocrine cells
-
Kubicek S, Gilbert JC, Fomina-Yadlin D, Gitlin AD, Yuan Y, Wagner FF, Holson EB, Luo T, Lewis TA, Taylor B, et al, (2012) Chromatin-targeting small molecules cause class-specific transcriptional changes in pancreatic endocrine cells. Proc Natl Acad Sci USA 109: 5364-5369
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 5364-5369
-
-
Kubicek, S.1
Gilbert, J.C.2
Fomina-Yadlin, D.3
Gitlin, A.D.4
Yuan, Y.5
Wagner, F.F.6
Holson, E.B.7
Luo, T.8
Lewis, T.A.9
Taylor, B.10
-
10
-
-
84899740700
-
Development of a conditionally immortalized human pancreatic beta cell line
-
Scharfmann R, Pechberty S, Hazhouz Y, von Bulow M, Bricout-Neveu E, Grenier-Godard M, Guez F, Rachdi L, Lohmann M, Czernichow P, et al, (2014) Development of a conditionally immortalized human pancreatic beta cell line. J Clin Invest 124: 2087-2098
-
(2014)
J Clin Invest
, vol.124
, pp. 2087-2098
-
-
Scharfmann, R.1
Pechberty, S.2
Hazhouz, Y.3
Von Bulow, M.4
Bricout-Neveu, E.5
Grenier-Godard, M.6
Guez, F.7
Rachdi, L.8
Lohmann, M.9
Czernichow, P.10
-
11
-
-
80054682732
-
Transcriptomes of the major human pancreatic cell types
-
Dorrell C, Schug J, Lin CF, Canaday PS, Fox AJ, Smirnova O, Bonnah R, Streeter PR, Stoeckert CJ Jr, Kaestner KH, et al, (2011) Transcriptomes of the major human pancreatic cell types. Diabetologia 54: 2832-2844
-
(2011)
Diabetologia
, vol.54
, pp. 2832-2844
-
-
Dorrell, C.1
Schug, J.2
Lin, C.F.3
Canaday, P.S.4
Fox, A.J.5
Smirnova, O.6
Bonnah, R.7
Streeter, P.R.8
Stoeckert, C.J.9
Kaestner, K.H.10
-
12
-
-
84942346225
-
Novel observations from next-generation RNA sequencing of highly purified human adult and fetal islet cell subsets
-
Blodgett DM, Nowosielska A, Afik S, Pechhold S, Cura AJ, Kennedy NJ, Kim S, Kucukural A, Davis RJ, Kent SC, et al, (2015) Novel observations from next-generation RNA sequencing of highly purified human adult and fetal islet cell subsets. Diabetes 64: 3172-3181
-
(2015)
Diabetes
, vol.64
, pp. 3172-3181
-
-
Blodgett, D.M.1
Nowosielska, A.2
Afik, S.3
Pechhold, S.4
Cura, A.J.5
Kennedy, N.J.6
Kim, S.7
Kucukural, A.8
Davis, R.J.9
Kent, S.C.10
-
13
-
-
84900529199
-
Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq
-
Treutlein B, Brownfield DG, Wu AR, Neff NF, Mantalas GL, Espinoza FH, Desai TJ, Krasnow MA, Quake SR, (2014) Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. Nature 509: 371-375
-
(2014)
Nature
, vol.509
, pp. 371-375
-
-
Treutlein, B.1
Brownfield, D.G.2
Wu, A.R.3
Neff, N.F.4
Mantalas, G.L.5
Espinoza, F.H.6
Desai, T.J.7
Krasnow, M.A.8
Quake, S.R.9
-
14
-
-
84893905629
-
Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types
-
Jaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N, Paul F, Zaretsky I, Mildner A, Cohen N, Jung S, Tanay A, et al, (2014) Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types. Science 343: 776-779
-
(2014)
Science
, vol.343
, pp. 776-779
-
-
Jaitin, D.A.1
Kenigsberg, E.2
Keren-Shaul, H.3
Elefant, N.4
Paul, F.5
Zaretsky, I.6
Mildner, A.7
Cohen, N.8
Jung, S.9
Tanay, A.10
-
15
-
-
84924565530
-
Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq
-
Zeisel A, Munoz-Manchado AB, Codeluppi S, Lonnerberg P, La Manno G, Jureus A, Marques S, Munguba H, He L, Betsholtz C, et al, (2015) Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq. Science 347: 1138-1142
-
(2015)
Science
, vol.347
, pp. 1138-1142
-
-
Zeisel, A.1
Munoz-Manchado, A.B.2
Codeluppi, S.3
Lonnerberg, P.4
La Manno, G.5
Jureus, A.6
Marques, S.7
Munguba, H.8
He, L.9
Betsholtz, C.10
-
16
-
-
84924601067
-
Single-cell DNA methylome sequencing and bioinformatic inference of epigenomic cell-state dynamics
-
Farlik M, Sheffield NC, Nuzzo A, Datlinger P, Schonegger A, Klughammer J, Bock C, (2015) Single-cell DNA methylome sequencing and bioinformatic inference of epigenomic cell-state dynamics. Cell Rep 10: 1386-1397
-
(2015)
Cell Rep
, vol.10
, pp. 1386-1397
-
-
Farlik, M.1
Sheffield, N.C.2
Nuzzo, A.3
Datlinger, P.4
Schonegger, A.5
Klughammer, J.6
Bock, C.7
-
17
-
-
84891677425
-
Full-length RNA-seq from single cells using Smart-seq2
-
Picelli S, Faridani OR, Bjorklund AK, Winberg G, Sagasser S, Sandberg R, (2014) Full-length RNA-seq from single cells using Smart-seq2. Nat Protoc 9: 171-181
-
(2014)
Nat Protoc
, vol.9
, pp. 171-181
-
-
Picelli, S.1
Faridani, O.R.2
Bjorklund, A.K.3
Winberg, G.4
Sagasser, S.5
Sandberg, R.6
-
18
-
-
84863992953
-
Identifying differentially expressed transcripts from RNA-seq data with biological variation
-
Glaus P, Honkela A, Rattray M, (2012) Identifying differentially expressed transcripts from RNA-seq data with biological variation. Bioinformatics 28: 1721-1728
-
(2012)
Bioinformatics
, vol.28
, pp. 1721-1728
-
-
Glaus, P.1
Honkela, A.2
Rattray, M.3
-
19
-
-
0348013067
-
Gene length and proximity to neighbors affect genome-wide expression levels
-
Chiaromonte F, Miller W, Bouhassira EE, (2003) Gene length and proximity to neighbors affect genome-wide expression levels. Genome Res 13: 2602-2608
-
(2003)
Genome Res
, vol.13
, pp. 2602-2608
-
-
Chiaromonte, F.1
Miller, W.2
Bouhassira, E.E.3
-
20
-
-
84867070330
-
Human beta cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes
-
Moran I, Akerman I, van de Bunt M, Xie R, Benazra M, Nammo T, Arnes L, Nakic N, Garcia-Hurtado J, Rodriguez-Segui S, et al, (2012) Human beta cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes. Cell Metab 16: 435-448
-
(2012)
Cell Metab
, vol.16
, pp. 435-448
-
-
Moran, I.1
Akerman, I.2
Van De Bunt, M.3
Xie, R.4
Benazra, M.5
Nammo, T.6
Arnes, L.7
Nakic, N.8
Garcia-Hurtado, J.9
Rodriguez-Segui, S.10
-
21
-
-
84868292211
-
Clinical features and treatment of maturity onset diabetes of the young (MODY)
-
Gardner DS, Tai ES, (2012) Clinical features and treatment of maturity onset diabetes of the young (MODY). Diabetes Metab Syndr Obes 5: 101-108
-
(2012)
Diabetes Metab Syndr Obes
, vol.5
, pp. 101-108
-
-
Gardner, D.S.1
Tai, E.S.2
-
22
-
-
25844433114
-
Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels
-
Bengtsson M, Stahlberg A, Rorsman P, Kubista M, (2005) Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels. Genome Res 15: 1388-1392
-
(2005)
Genome Res
, vol.15
, pp. 1388-1392
-
-
Bengtsson, M.1
Stahlberg, A.2
Rorsman, P.3
Kubista, M.4
-
23
-
-
3142764484
-
Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes
-
Bruce AW, Donaldson IJ, Wood IC, Yerbury SA, Sadowski MI, Chapman M, Gottgens B, Buckley NJ, (2004) Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes. Proc Natl Acad Sci USA 101: 10458-10463
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 10458-10463
-
-
Bruce, A.W.1
Donaldson, I.J.2
Wood, I.C.3
Yerbury, S.A.4
Sadowski, M.I.5
Chapman, M.6
Gottgens, B.7
Buckley, N.J.8
-
24
-
-
34250159524
-
Genome-wide mapping of in vivo protein-DNA interactions
-
Johnson DS, Mortazavi A, Myers RM, Wold B, (2007) Genome-wide mapping of in vivo protein-DNA interactions. Science 316: 1497-1502
-
(2007)
Science
, vol.316
, pp. 1497-1502
-
-
Johnson, D.S.1
Mortazavi, A.2
Myers, R.M.3
Wold, B.4
-
25
-
-
84859828595
-
In vitro reprogramming of rat bone marrow-derived mesenchymal stem cells into insulin-producing cells by genetically manipulating negative and positive regulators
-
Li HT, Jiang FX, Shi P, Zhang T, Liu XY, Lin XW, Pang XN, (2012) In vitro reprogramming of rat bone marrow-derived mesenchymal stem cells into insulin-producing cells by genetically manipulating negative and positive regulators. Biochem Biophys Res Commun 420: 793-798
-
(2012)
Biochem Biophys Res Commun
, vol.420
, pp. 793-798
-
-
Li, H.T.1
Jiang, F.X.2
Shi, P.3
Zhang, T.4
Liu, X.Y.5
Lin, X.W.6
Pang, X.N.7
-
26
-
-
79959854029
-
Neuronal restrictive silencing factor silencing induces human amniotic fluid-derived stem cells differentiation into insulin-producing cells
-
Li B, Wang S, Liu H, Liu D, Zhang J, Zhang B, Yao H, Lv Y, Wang R, Chen L, et al, (2011) Neuronal restrictive silencing factor silencing induces human amniotic fluid-derived stem cells differentiation into insulin-producing cells. Stem Cells Dev 20: 1223-1231
-
(2011)
Stem Cells Dev
, vol.20
, pp. 1223-1231
-
-
Li, B.1
Wang, S.2
Liu, H.3
Liu, D.4
Zhang, J.5
Zhang, B.6
Yao, H.7
Lv, Y.8
Wang, R.9
Chen, L.10
-
27
-
-
77951853210
-
Unique arrangement of alpha- and beta-cells in human islets of Langerhans
-
Bosco D, Armanet M, Morel P, Niclauss N, Sgroi A, Muller YD, Giovannoni L, Parnaud G, Berney T, (2010) Unique arrangement of alpha- and beta-cells in human islets of Langerhans. Diabetes 59: 1202-1210
-
(2010)
Diabetes
, vol.59
, pp. 1202-1210
-
-
Bosco, D.1
Armanet, M.2
Morel, P.3
Niclauss, N.4
Sgroi, A.5
Muller, Y.D.6
Giovannoni, L.7
Parnaud, G.8
Berney, T.9
-
28
-
-
84911896830
-
Association of the Vitamin D binding protein polymorphisms with the risk of type 2 diabetes mellitus: A meta-analysis
-
Wang G, Li Y, Li L, Yu F, Cui L, Ba Y, Li W, Wang C, (2014) Association of the vitamin D binding protein polymorphisms with the risk of type 2 diabetes mellitus: a meta-analysis. BMJ Open 4: e005617
-
(2014)
BMJ Open
, vol.4
, pp. e005617
-
-
Wang, G.1
Li, Y.2
Li, L.3
Yu, F.4
Cui, L.5
Ba, Y.6
Li, W.7
Wang, C.8
-
29
-
-
77957009475
-
Small-molecule inducers of insulin expression in pancreatic alpha-cells
-
Fomina-Yadlin D, Kubicek S, Walpita D, Dancik V, Hecksher-Sorensen J, Bittker JA, Sharifnia T, Shamji A, Clemons PA, Wagner BK, et al, (2010) Small-molecule inducers of insulin expression in pancreatic alpha-cells. Proc Natl Acad Sci USA 107: 15099-15104
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 15099-15104
-
-
Fomina-Yadlin, D.1
Kubicek, S.2
Walpita, D.3
Dancik, V.4
Hecksher-Sorensen, J.5
Bittker, J.A.6
Sharifnia, T.7
Shamji, A.8
Clemons, P.A.9
Wagner, B.K.10
-
30
-
-
70350704818
-
Id-1 promotes tumorigenicity and metastasis of human esophageal cancer cells through activation of PI3K/AKT signaling pathway
-
Li B, Tsao SW, Li YY, Wang X, Ling MT, Wong YC, He QY, Cheung AL, (2009) Id-1 promotes tumorigenicity and metastasis of human esophageal cancer cells through activation of PI3K/AKT signaling pathway. Int J Cancer 125: 2576-2585
-
(2009)
Int J Cancer
, vol.125
, pp. 2576-2585
-
-
Li, B.1
Tsao, S.W.2
Li, Y.Y.3
Wang, X.4
Ling, M.T.5
Wong, Y.C.6
He, Q.Y.7
Cheung, A.L.8
-
31
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B, Trapnell C, Pop M, Salzberg SL, (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25
-
(2009)
Genome Biol
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
32
-
-
84876996918
-
TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
-
Kim D, Pertea G, Trapnell C, Pimentel H, Kelley R, Salzberg SL, (2013) TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol 14: R36
-
(2013)
Genome Biol
, vol.14
, pp. R36
-
-
Kim, D.1
Pertea, G.2
Trapnell, C.3
Pimentel, H.4
Kelley, R.5
Salzberg, S.L.6
-
33
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
-
Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, Gillette MA, Paulovich A, Pomeroy SL, Golub TR, Lander ES, et al, (2005) Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 102: 15545-15550
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
Gillette, M.A.6
Paulovich, A.7
Pomeroy, S.L.8
Golub, T.R.9
Lander, E.S.10
-
34
-
-
0038054341
-
PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes
-
Mootha VK, Lindgren CM, Eriksson KF, Subramanian A, Sihag S, Lehar J, Puigserver P, Carlsson E, Ridderstrale M, Laurila E, et al, (2003) PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nat Genet 34: 267-273.
-
(2003)
Nat Genet
, vol.34
, pp. 267-273
-
-
Mootha, V.K.1
Lindgren, C.M.2
Eriksson, K.F.3
Subramanian, A.4
Sihag, S.5
Lehar, J.6
Puigserver, P.7
Carlsson, E.8
Ridderstrale, M.9
Laurila, E.10
|