-
1
-
-
84918591159
-
Diversity, distribution and hydrocarbon biodegradation capabilities of microbial communities in oil-contaminated cyanobacterial mats from a constructed wetland
-
PID: 25514025
-
Abed RMM, Al-Kharusi S, Prigent S, Headley T (2014) Diversity, distribution and hydrocarbon biodegradation capabilities of microbial communities in oil-contaminated cyanobacterial mats from a constructed wetland. PLoS One 9:e114570
-
(2014)
PLoS One
, vol.9
-
-
Abed, R.M.M.1
Al-Kharusi, S.2
Prigent, S.3
Headley, T.4
-
2
-
-
84896023943
-
Microbial communities from different types of natural wastewater treatment systems: vertical and horizontal flow constructed wetlands and biofilters
-
PID: 24631879
-
Adrados B, Sanchez O, Arias CA, Becares E, Garrido L, Mas J, Brix H, Morato J (2014) Microbial communities from different types of natural wastewater treatment systems: vertical and horizontal flow constructed wetlands and biofilters. Water Res 55:304–312
-
(2014)
Water Res
, vol.55
, pp. 304-312
-
-
Adrados, B.1
Sanchez, O.2
Arias, C.A.3
Becares, E.4
Garrido, L.5
Mas, J.6
Brix, H.7
Morato, J.8
-
3
-
-
84890827477
-
Characterisation of the soil bacterial community structure and composition of natural and constructed wetlands
-
PID: 24361449
-
Ansola G, Arroyo P, de Miera LES (2014) Characterisation of the soil bacterial community structure and composition of natural and constructed wetlands. Sci Total Environ 473:63–71
-
(2014)
Sci Total Environ
, vol.473
, pp. 63-71
-
-
Ansola, G.1
Arroyo, P.2
de Miera, L.E.S.3
-
4
-
-
84911892766
-
Influence of environmental variables on the structure and composition of soil bacterial communities in natural and constructed wetlands
-
PID: 25460973
-
Arroyo P, de Miera LES, Ansola G (2015) Influence of environmental variables on the structure and composition of soil bacterial communities in natural and constructed wetlands. Sci Total Environ 506:380–390
-
(2015)
Sci Total Environ
, vol.506
, pp. 380-390
-
-
Arroyo, P.1
de Miera, L.E.S.2
Ansola, G.3
-
5
-
-
84894338444
-
Using high-throughput sequencing to assess the impacts of treated and untreated wastewater discharge on prokaryotic communities in an urban river
-
PID: 23912119
-
Bai YH, Qi WX, Liang JS, Qu JH (2014) Using high-throughput sequencing to assess the impacts of treated and untreated wastewater discharge on prokaryotic communities in an urban river. Appl Microbiol Biotechnol 98:1841–1851
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 1841-1851
-
-
Bai, Y.H.1
Qi, W.X.2
Liang, J.S.3
Qu, J.H.4
-
6
-
-
0141564890
-
Temporal change in culturable phenanthrene degraders in response to long-term exposure to phenanthrene in a soil column system
-
PID: 14510842
-
Bodour AA, Wang JM, Brusseau ML, Maier RM (2003) Temporal change in culturable phenanthrene degraders in response to long-term exposure to phenanthrene in a soil column system. Environ Microbiol 5:888–895
-
(2003)
Environ Microbiol
, vol.5
, pp. 888-895
-
-
Bodour, A.A.1
Wang, J.M.2
Brusseau, M.L.3
Maier, R.M.4
-
7
-
-
84864569210
-
The structure and spatio-temporal distribution of the Archaea in a horizontal subsurface flow constructed wetland
-
PID: 22885352
-
Bouali M, Zrafi-Nouira I, Bakhrouf A, Le Paslier D, Chaussonnerie S, Ammar E, Sghir A (2012) The structure and spatio-temporal distribution of the Archaea in a horizontal subsurface flow constructed wetland. Sci Total Environ 435:465–471
-
(2012)
Sci Total Environ
, vol.435
, pp. 465-471
-
-
Bouali, M.1
Zrafi-Nouira, I.2
Bakhrouf, A.3
Le Paslier, D.4
Chaussonnerie, S.5
Ammar, E.6
Sghir, A.7
-
8
-
-
84885920823
-
Characterization of rhizosphere prokaryotic diversity in a horizontal subsurface flow constructed wetland using a PCR cloning-sequencing based approach
-
PID: 22782248
-
Bouali M, Pelletier E, Chaussonnerie S, Le Paslier D, Bakhrouf A, Sghir A (2013) Characterization of rhizosphere prokaryotic diversity in a horizontal subsurface flow constructed wetland using a PCR cloning-sequencing based approach. Appl Microbiol Biotechnol 97:4221–4231
-
(2013)
Appl Microbiol Biotechnol
, vol.97
, pp. 4221-4231
-
-
Bouali, M.1
Pelletier, E.2
Chaussonnerie, S.3
Le Paslier, D.4
Bakhrouf, A.5
Sghir, A.6
-
9
-
-
84898860985
-
Bacterial structure and spatiotemporal distribution in a horizontal subsurface flow constructed wetland
-
PID: 24193248
-
Bouali M, Zrafi I, Bakhrouf A, Chaussonnerie S, Sghir A (2014) Bacterial structure and spatiotemporal distribution in a horizontal subsurface flow constructed wetland. Appl Microbiol Biotechnol 98:3191–3203
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 3191-3203
-
-
Bouali, M.1
Zrafi, I.2
Bakhrouf, A.3
Chaussonnerie, S.4
Sghir, A.5
-
10
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
PID: 20383131
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pena AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7:335–336
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Pena, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
McDonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Turnbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
11
-
-
84925461471
-
Comparative study of microbial community structure in integrated vertical-flow constructed wetlands for treatment of domestic and nitrified wastewaters
-
Chang JJ, Wu SQ, Liang K, Wu ZB, Liang W (2015) Comparative study of microbial community structure in integrated vertical-flow constructed wetlands for treatment of domestic and nitrified wastewaters. Environ Sci Pollut Res 22:3518–3527
-
(2015)
Environ Sci Pollut Res
, vol.22
, pp. 3518-3527
-
-
Chang, J.J.1
Wu, S.Q.2
Liang, K.3
Wu, Z.B.4
Liang, W.5
-
12
-
-
84877774733
-
Production of butanol from glucose and xylose with immobilized cells of Clostridium acetobutylicum
-
Chen Y, Zhou T, Liu D, Li A, Xu SB, Liu QG, Li BB, Ying HJ (2013) Production of butanol from glucose and xylose with immobilized cells of Clostridium acetobutylicum. Biotechnol Bioprocess Eng 18:234–241
-
(2013)
Biotechnol Bioprocess Eng
, vol.18
, pp. 234-241
-
-
Chen, Y.1
Zhou, T.2
Liu, D.3
Li, A.4
Xu, S.B.5
Liu, Q.G.6
Li, B.B.7
Ying, H.J.8
-
13
-
-
84880338482
-
Two novel strains within the family Caulobacteraceae capable of degradation of linear alkylbenzene sulfonates as pure cultures
-
Cortes-Lorenzo C, Sanchez-Peinado MD, Oliver-Rodriguez B, Vilchez JL, Gonzalez-Lopez JJ, Rodriguez-Diaz M (2013) Two novel strains within the family Caulobacteraceae capable of degradation of linear alkylbenzene sulfonates as pure cultures. Int Biodeterior Biodegrad 85:62–65
-
(2013)
Int Biodeterior Biodegrad
, vol.85
, pp. 62-65
-
-
Cortes-Lorenzo, C.1
Sanchez-Peinado, M.D.2
Oliver-Rodriguez, B.3
Vilchez, J.L.4
Gonzalez-Lopez, J.J.5
Rodriguez-Diaz, M.6
-
14
-
-
84905384332
-
Microbial diversity in hummock and hollow soils of three wetlands on the Qinghai-Tibetan Plateau revealed by 16S rRNA pyrosequencing
-
PID: 25078273
-
Deng YC, Cui XY, Hernandez M, Dumont MG (2014) Microbial diversity in hummock and hollow soils of three wetlands on the Qinghai-Tibetan Plateau revealed by 16S rRNA pyrosequencing. PLoS One 9:e103115
-
(2014)
PLoS One
, vol.9
-
-
Deng, Y.C.1
Cui, X.Y.2
Hernandez, M.3
Dumont, M.G.4
-
15
-
-
84879651754
-
Kinetic evaluation and modeling for batch degradation of 2-hydroxybiphenyl and 2,2′-dihydroxybiphenyl by Corynebacterium variabilis Sh42
-
Deriase SF, Younis SA, El-Gendy NS (2013) Kinetic evaluation and modeling for batch degradation of 2-hydroxybiphenyl and 2,2′-dihydroxybiphenyl by Corynebacterium variabilis Sh42. Desalin Water Treat 51:4719–4728
-
(2013)
Desalin Water Treat
, vol.51
, pp. 4719-4728
-
-
Deriase, S.F.1
Younis, S.A.2
El-Gendy, N.S.3
-
16
-
-
84885047267
-
Bacterial and archaeal diversity in high altitude wetlands of the Chilean Altiplano
-
Dorador C, Vila I, Witzel KP, Imhoff JF (2013) Bacterial and archaeal diversity in high altitude wetlands of the Chilean Altiplano. Fundam Appl Limnol 182:135–159
-
(2013)
Fundam Appl Limnol
, vol.182
, pp. 135-159
-
-
Dorador, C.1
Vila, I.2
Witzel, K.P.3
Imhoff, J.F.4
-
17
-
-
79961181125
-
UCHIME improves sensitivity and speed of chimera detection
-
PID: 21700674
-
Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R (2011) UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27:2194–2200
-
(2011)
Bioinformatics
, vol.27
, pp. 2194-2200
-
-
Edgar, R.C.1
Haas, B.J.2
Clemente, J.C.3
Quince, C.4
Knight, R.5
-
18
-
-
84884904719
-
UPARSE: highly accurate OTU sequences from microbial amplicon reads
-
PID: 23955772
-
Edgar RC (2013) UPARSE: highly accurate OTU sequences from microbial amplicon reads. Nat Methods 10:996–998
-
(2013)
Nat Methods
, vol.10
, pp. 996-998
-
-
Edgar, R.C.1
-
19
-
-
84908102067
-
Bacterial communities in batch and continuous-flow wetlands treating the herbicide S-metolachlor
-
PID: 25201820
-
Elsayed OF, Maillard E, Vuilleumier S, Imfeld G (2014) Bacterial communities in batch and continuous-flow wetlands treating the herbicide S-metolachlor. Sci Total Environ 499:327–335
-
(2014)
Sci Total Environ
, vol.499
, pp. 327-335
-
-
Elsayed, O.F.1
Maillard, E.2
Vuilleumier, S.3
Imfeld, G.4
-
20
-
-
84945491825
-
Influence of substrate type on microbial community structure in vertical-flow constructed wetland treating polluted river water
-
Guan W, Yin M, He T, Xie SG (2015) Influence of substrate type on microbial community structure in vertical-flow constructed wetland treating polluted river water. Environ Sci Pollut Res. doi:10.1007/s11356-015-5160-9
-
(2015)
Environ Sci Pollut Res
-
-
Guan, W.1
Yin, M.2
He, T.3
Xie, S.G.4
-
21
-
-
84925493738
-
Rhizosphere bacterial community of Typha angustifolia L. and water quality in a river wetland supplied with reclaimed water
-
GuoYH, Gong HL, Guo XY (2015) Rhizosphere bacterial community of Typha angustifolia L. and water quality in a river wetland supplied with reclaimed water. Appl Microbiol Biotechnol 99:2883–2893
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 2883-2893
-
-
GuoYH, G.H.L.1
Guo, X.Y.2
-
22
-
-
84899577123
-
Microbial activity and community structure in two terrace-type wetlands constructed for the treatment of domestic wastewater
-
He GH, Yi F, Zhou S, Lin JY (2014) Microbial activity and community structure in two terrace-type wetlands constructed for the treatment of domestic wastewater. Ecol Eng 67:198–205
-
(2014)
Ecol Eng
, vol.67
, pp. 198-205
-
-
He, G.H.1
Yi, F.2
Zhou, S.3
Lin, J.Y.4
-
23
-
-
67649220035
-
Diversity of Archaea and detection of crenarchaeotal amoA genes in the rivers Rhine and Tet
-
Herfort L, Kim JH, Coolen MJL, Abbas B, Schouten S, Herndl GJ, Damste JSS (2009) Diversity of Archaea and detection of crenarchaeotal amoA genes in the rivers Rhine and Tet. Aquat Microb Ecol 55:189–201
-
(2009)
Aquat Microb Ecol
, vol.55
, pp. 189-201
-
-
Herfort, L.1
Kim, J.H.2
Coolen, M.J.L.3
Abbas, B.4
Schouten, S.5
Herndl, G.J.6
Damste, J.S.S.7
-
24
-
-
84937250484
-
Biogeography of planktonic and benthic archaeal communities in a subtropical eutrophic estuary of China
-
PID: 25805214
-
Hu AY, Hou LY, Yu CP (2015) Biogeography of planktonic and benthic archaeal communities in a subtropical eutrophic estuary of China. Microb Ecol 70:322–335
-
(2015)
Microb Ecol
, vol.70
, pp. 322-335
-
-
Hu, A.Y.1
Hou, L.Y.2
Yu, C.P.3
-
25
-
-
84878500513
-
Candidatus Methanogranum caenicola: a novel methanogen from the anaerobic digested sludge and proposal of Methanomassiliicoccaceae fam. nov and Methanomassiliicoccales ord. nov. for a methanogenic lineage of the class Thermoplasmata
-
PID: 23524372
-
Iino T, Tamaki H, Tamazawa S, Ueno Y, Ohkuma M, Suzuki K, Igarashi Y, Haruta S (2013) Candidatus Methanogranum caenicola: a novel methanogen from the anaerobic digested sludge and proposal of Methanomassiliicoccaceae fam. nov and Methanomassiliicoccales ord. nov. for a methanogenic lineage of the class Thermoplasmata. Microbes Environ 28:244–250
-
(2013)
Microbes Environ
, vol.28
, pp. 244-250
-
-
Iino, T.1
Tamaki, H.2
Tamazawa, S.3
Ueno, Y.4
Ohkuma, M.5
Suzuki, K.6
Igarashi, Y.7
Haruta, S.8
-
26
-
-
40449132267
-
Methanolinea tarda gen. nov., sp nov., a methane-producing archaeon isolated from a methanogenic digester sludge
-
PID: 18175725
-
Imachi H, Sakai S, Sekiguchi Y, Hanada S, Kamagata Y, Ohashi A, Harada H (2008) Methanolinea tarda gen. nov., sp nov., a methane-producing archaeon isolated from a methanogenic digester sludge. Int J Syst Evol Microbiol 58:294–301
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 294-301
-
-
Imachi, H.1
Sakai, S.2
Sekiguchi, Y.3
Hanada, S.4
Kamagata, Y.5
Ohashi, A.6
Harada, H.7
-
27
-
-
33646262107
-
Quantifying archaeal community autotrophy in the mesopelagic ocean using natural radiocarbon
-
PID: 16614070
-
Ingalls AE, Shah SR, Hansman RL, Aluwihare LI, Santos GM, Druffel ERM, Pearson A (2006) Quantifying archaeal community autotrophy in the mesopelagic ocean using natural radiocarbon. Proc Natl Acad Sci U S A 103:6442–6447
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 6442-6447
-
-
Ingalls, A.E.1
Shah, S.R.2
Hansman, R.L.3
Aluwihare, L.I.4
Santos, G.M.5
Druffel, E.R.M.6
Pearson, A.7
-
28
-
-
84929147120
-
Functional analysis of alkane hydroxylase system derived from Pseudomonas aeruginosa E7 for low molecular weight polyethylene biodegradation
-
Jeon HJ, Kim MN (2015) Functional analysis of alkane hydroxylase system derived from Pseudomonas aeruginosa E7 for low molecular weight polyethylene biodegradation. Int Biodeterior Biodegrad 103:141–146
-
(2015)
Int Biodeterior Biodegrad
, vol.103
, pp. 141-146
-
-
Jeon, H.J.1
Kim, M.N.2
-
29
-
-
84905277769
-
A four-stage constructed wetland system for treating polluted water from an urban river
-
Jia HF, Sun ZX, Li GH (2014) A four-stage constructed wetland system for treating polluted water from an urban river. Ecol Eng 71:48–55
-
(2014)
Ecol Eng
, vol.71
, pp. 48-55
-
-
Jia, H.F.1
Sun, Z.X.2
Li, G.H.3
-
30
-
-
84923702463
-
Acinetobacter species as model microorganisms in environmental microbiology: current state and perspectives
-
PID: 25693672
-
Jung J, Park W (2015) Acinetobacter species as model microorganisms in environmental microbiology: current state and perspectives. Appl Microbiol Biotechnol 99:2533–2548
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 2533-2548
-
-
Jung, J.1
Park, W.2
-
31
-
-
84898548051
-
Distinct bacterial communities dominate tropical and temperate zone leaf litter
-
PID: 24549745
-
Kim M, Kim WS, Tripathi BM, Adams J (2014) Distinct bacterial communities dominate tropical and temperate zone leaf litter. Microb Ecol 67:837–848
-
(2014)
Microb Ecol
, vol.67
, pp. 837-848
-
-
Kim, M.1
Kim, W.S.2
Tripathi, B.M.3
Adams, J.4
-
32
-
-
84925497342
-
Community composition of known and uncultured archaeal lineages in anaerobic or anoxic wastewater treatment sludge
-
PID: 25373332
-
Kuroda K, Hatamoto M, Nakahara N, Abe K, Takahashi M, Araki N, Yamaguchi T (2015) Community composition of known and uncultured archaeal lineages in anaerobic or anoxic wastewater treatment sludge. Microb Ecol 69:586–596
-
(2015)
Microb Ecol
, vol.69
, pp. 586-596
-
-
Kuroda, K.1
Hatamoto, M.2
Nakahara, N.3
Abe, K.4
Takahashi, M.5
Araki, N.6
Yamaguchi, T.7
-
33
-
-
77954365666
-
Endophytic bacterial diversity in roots of Phragmites australis in constructed Beijing Cuihu Wetland (China)
-
PID: 20528944
-
Li YH, Zhu JN, Zhai ZH, Zhang QA (2010) Endophytic bacterial diversity in roots of Phragmites australis in constructed Beijing Cuihu Wetland (China). FEMS Microbiol Lett 309:84–93
-
(2010)
FEMS Microbiol Lett
, vol.309
, pp. 84-93
-
-
Li, Y.H.1
Zhu, J.N.2
Zhai, Z.H.3
Zhang, Q.A.4
-
34
-
-
84875274951
-
Changes of biomass and bacterial communities in biological activated carbon filters for drinking water treatment
-
Liao XB, Chen C, Wang Z, Wan R, Chang CH, Zhang XJ, Xie SG (2013) Changes of biomass and bacterial communities in biological activated carbon filters for drinking water treatment. Process Biochem 48:312–316
-
(2013)
Process Biochem
, vol.48
, pp. 312-316
-
-
Liao, X.B.1
Chen, C.2
Wang, Z.3
Wan, R.4
Chang, C.H.5
Zhang, X.J.6
Xie, S.G.7
-
35
-
-
84925783991
-
Operational performance, biomass and microbial community structure: impacts of backwashing on drinking water biofilter
-
Liao XB, Chen C, Zhang JX, Dai Y, Zhang XJ, Xie SG (2015) Operational performance, biomass and microbial community structure: impacts of backwashing on drinking water biofilter. Environ Sci Pollut Res 22:546–554
-
(2015)
Environ Sci Pollut Res
, vol.22
, pp. 546-554
-
-
Liao, X.B.1
Chen, C.2
Zhang, J.X.3
Dai, Y.4
Zhang, X.J.5
Xie, S.G.6
-
36
-
-
84908095102
-
Characterization of bacterial communities in soil and sediment of a created riverine wetland complex using high throughput 16S rRNA amplicon sequencing
-
Ligi T, Oopkaup K, Truu M, Preem JK, Nolvak H, Mitsch WJ, Mander U, Truu J (2014) Characterization of bacterial communities in soil and sediment of a created riverine wetland complex using high throughput 16S rRNA amplicon sequencing. Ecol Eng 72:56–66
-
(2014)
Ecol Eng
, vol.72
, pp. 56-66
-
-
Ligi, T.1
Oopkaup, K.2
Truu, M.3
Preem, J.K.4
Nolvak, H.5
Mitsch, W.J.6
Mander, U.7
Truu, J.8
-
37
-
-
84899486565
-
Specific archaeal communities are selected on the root surfaces of Ruppia spp. and Phragmites australis
-
Lliros M, Trias R, Borrego C, Baneras L (2014) Specific archaeal communities are selected on the root surfaces of Ruppia spp. and Phragmites australis. Wetlands 34:403–411
-
(2014)
Wetlands
, vol.34
, pp. 403-411
-
-
Lliros, M.1
Trias, R.2
Borrego, C.3
Baneras, L.4
-
38
-
-
84905749583
-
Spatial distribution of bacterial communities in high-altitude freshwater wetland sediment
-
Liu Y, Zhang JX, Zhao L, Zhang XL, Xie SG (2014a) Spatial distribution of bacterial communities in high-altitude freshwater wetland sediment. Limnology 15:249–256
-
(2014)
Limnology
, vol.15
, pp. 249-256
-
-
Liu, Y.1
Zhang, J.X.2
Zhao, L.3
Zhang, X.L.4
Xie, S.G.5
-
39
-
-
84906310440
-
Conversion from natural wetlands to paddy field alters the composition of soil bacterial communities in Sanjiang Plain, Northeast China
-
Liu JJ, Zheng CY, Song CC, Guo SD, Liu XB, Wang GH (2014b) Conversion from natural wetlands to paddy field alters the composition of soil bacterial communities in Sanjiang Plain, Northeast China. Ann Microbiol 64:1395–1403
-
(2014)
Ann Microbiol
, vol.64
, pp. 1395-1403
-
-
Liu, J.J.1
Zheng, C.Y.2
Song, C.C.3
Guo, S.D.4
Liu, X.B.5
Wang, G.H.6
-
40
-
-
84907042484
-
Engineering chlorpyrifos-degrading Stenotrophomonas sp YC-1 for heavy metal accumulation and enhanced chlorpyrifos degradation
-
PID: 25151179
-
Liu RH, Jiang H, Xu P, Qiao CL, Zhou QX, Yang C (2014c) Engineering chlorpyrifos-degrading Stenotrophomonas sp YC-1 for heavy metal accumulation and enhanced chlorpyrifos degradation. Biodegradation 25:903–910
-
(2014)
Biodegradation
, vol.25
, pp. 903-910
-
-
Liu, R.H.1
Jiang, H.2
Xu, P.3
Qiao, C.L.4
Zhou, Q.X.5
Yang, C.6
-
41
-
-
84939988469
-
Distribution of sediment ammonia-oxidizing microorganisms in plateau freshwater lakes
-
PID: 25567515
-
Liu Y, Zhang JX, Zhao L, Li YZ, Dai Y, Xie SG (2015) Distribution of sediment ammonia-oxidizing microorganisms in plateau freshwater lakes. Appl Microbiol Biotechnol 99:4435–4444
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 4435-4444
-
-
Liu, Y.1
Zhang, J.X.2
Zhao, L.3
Li, Y.Z.4
Dai, Y.5
Xie, S.G.6
-
42
-
-
84886287161
-
Bacterial and archaeal communities in the acid pit lake sediments of a chalcopyrite mine
-
PID: 23963670
-
Lucheta AR, Otero XL, Macias F, Lambais MR (2013) Bacterial and archaeal communities in the acid pit lake sediments of a chalcopyrite mine. Extremophiles 17:941–951
-
(2013)
Extremophiles
, vol.17
, pp. 941-951
-
-
Lucheta, A.R.1
Otero, X.L.2
Macias, F.3
Lambais, M.R.4
-
43
-
-
84924333097
-
Characterization of the archaeal community fouling a membrane bioreactor
-
Luo JX, Zhang JS, Tan XH, McDougald D, Zhuang GQ, Fane AG, Kjelleberg S, Cohen Y, Rice SA (2015) Characterization of the archaeal community fouling a membrane bioreactor. J Environ Sci 29:115–123
-
(2015)
J Environ Sci
, vol.29
, pp. 115-123
-
-
Luo, J.X.1
Zhang, J.S.2
Tan, X.H.3
McDougald, D.4
Zhuang, G.Q.5
Fane, A.G.6
Kjelleberg, S.7
Cohen, Y.8
Rice, S.A.9
-
44
-
-
84938528128
-
Prediction of water quality index in constructed wetlands using support vector machine
-
Mohammadpour R, Shaharuddin S, Chang CK, Zakaria NA, Ab Ghani A, Chan NW (2015) Prediction of water quality index in constructed wetlands using support vector machine. Environ Sci Pollut Res 22:6208–6219
-
(2015)
Environ Sci Pollut Res
, vol.22
, pp. 6208-6219
-
-
Mohammadpour, R.1
Shaharuddin, S.2
Chang, C.K.3
Zakaria, N.A.4
Ab Ghani, A.5
Chan, N.W.6
-
45
-
-
84896888934
-
Key design factors affecting microbial community composition and pathogenic organism removal in horizontal subsurface flow constructed wetlands
-
PID: 24594738
-
Morato J, Codony F, Sanchez O, Perez LM, Garcia J, Mas J (2014) Key design factors affecting microbial community composition and pathogenic organism removal in horizontal subsurface flow constructed wetlands. Sci Total Environ 481:81–89
-
(2014)
Sci Total Environ
, vol.481
, pp. 81-89
-
-
Morato, J.1
Codony, F.2
Sanchez, O.3
Perez, L.M.4
Garcia, J.5
Mas, J.6
-
46
-
-
84861220096
-
Genome sequence of “Candidatus Nitrosopumilus salaria” BD31, an ammonia-oxidizing archaeon from the San Francisco Bay Estuary
-
PID: 22461555
-
Mosier AC, Allen EE, Kim M, Ferriera S, Francis CA (2012) Genome sequence of “Candidatus Nitrosopumilus salaria” BD31, an ammonia-oxidizing archaeon from the San Francisco Bay Estuary. J Bacteriol 194:2121–2122
-
(2012)
J Bacteriol
, vol.194
, pp. 2121-2122
-
-
Mosier, A.C.1
Allen, E.E.2
Kim, M.3
Ferriera, S.4
Francis, C.A.5
-
47
-
-
84876882097
-
Diesel oil removal by immobilized Pseudoxanthomonas sp RN402
-
PID: 23054183
-
Nopcharoenkul W, Netsakulnee P, Pinyakong O (2013) Diesel oil removal by immobilized Pseudoxanthomonas sp RN402. Biodegradation 24:387–397
-
(2013)
Biodegradation
, vol.24
, pp. 387-397
-
-
Nopcharoenkul, W.1
Netsakulnee, P.2
Pinyakong, O.3
-
48
-
-
84902540409
-
Methanogenic community changes, and emissions of methane and other gases, during storage of acidified and untreated pig slurry
-
PID: 24636626
-
Petersen SO, Hojberg O, Poulsen M, Schwab C, Eriksen J (2014) Methanogenic community changes, and emissions of methane and other gases, during storage of acidified and untreated pig slurry. J Appl Microbiol 117:160–172
-
(2014)
J Appl Microbiol
, vol.117
, pp. 160-172
-
-
Petersen, S.O.1
Hojberg, O.2
Poulsen, M.3
Schwab, C.4
Eriksen, J.5
-
49
-
-
84874628087
-
Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen
-
PID: 23385573
-
Poulsen M, Schwab C, Jensen BB, Engberg RM, Spang A, Canibe N, Hojberg O, Milinovich G, Fragner L, Schleper C, Weckwerth W, Lund P, Schramm A, Urich T (2013) Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen. Nat Commun 4:1428
-
(2013)
Nat Commun
, vol.4
, pp. 1428
-
-
Poulsen, M.1
Schwab, C.2
Jensen, B.B.3
Engberg, R.M.4
Spang, A.5
Canibe, N.6
Hojberg, O.7
Milinovich, G.8
Fragner, L.9
Schleper, C.10
Weckwerth, W.11
Lund, P.12
Schramm, A.13
Urich, T.14
-
50
-
-
84909592166
-
Achromobacter denitrificans strain SP1 efficiently remediates di(2-ethylhexyl)phthalate
-
Pradeep S, Josh MKS, Binod P, Devi RS, Balachandran S, Anderson RC, Benjamin S (2015) Achromobacter denitrificans strain SP1 efficiently remediates di(2-ethylhexyl)phthalate. Ecotox Environ Safe 112:114–121
-
(2015)
Ecotox Environ Safe
, vol.112
, pp. 114-121
-
-
Pradeep, S.1
Josh, M.K.S.2
Binod, P.3
Devi, R.S.4
Balachandran, S.5
Anderson, R.C.6
Benjamin, S.7
-
51
-
-
84905711187
-
Carbazole angular dioxygenation and mineralization by bacteria isolated from hydrocarbon-contaminated tropical African soil
-
Salam LB, Ilori MO, Amund OO, Numata M, Horisaki T, Nojiri H (2014) Carbazole angular dioxygenation and mineralization by bacteria isolated from hydrocarbon-contaminated tropical African soil. Environ Sci Pollut Res 21:9311–9324
-
(2014)
Environ Sci Pollut Res
, vol.21
, pp. 9311-9324
-
-
Salam, L.B.1
Ilori, M.O.2
Amund, O.O.3
Numata, M.4
Horisaki, T.5
Nojiri, H.6
-
52
-
-
84877937058
-
Pyrosequencing-based assessment of the bacteria diversity in surface and subsurface peat layers of a northern wetland, with focus on poorly studied phyla and candidate divisions
-
PID: 23700443
-
Serkebaeva YM, Kim Y, Liesack W, Dedysh SN (2013) Pyrosequencing-based assessment of the bacteria diversity in surface and subsurface peat layers of a northern wetland, with focus on poorly studied phyla and candidate divisions. PLoS One 8:e63994
-
(2013)
PLoS One
, vol.8
-
-
Serkebaeva, Y.M.1
Kim, Y.2
Liesack, W.3
Dedysh, S.N.4
-
53
-
-
84933278055
-
Feasibility of acetone-butanol-ethanol (ABE) fermentation from Amorphophallus konjac waste by Clostridium acetobutylicum ATCC 824
-
Shao MX, Chen HZ (2015) Feasibility of acetone-butanol-ethanol (ABE) fermentation from Amorphophallus konjac waste by Clostridium acetobutylicum ATCC 824. Process Biochem 50:1301–1307
-
(2015)
Process Biochem
, vol.50
, pp. 1301-1307
-
-
Shao, M.X.1
Chen, H.Z.2
-
54
-
-
34047135116
-
Methanosaeta, the forgotten methanogen?
-
PID: 17320399
-
Smith KS, Ingram-Smith C (2007) Methanosaeta, the forgotten methanogen? Trends Microbiol 15:150–155
-
(2007)
Trends Microbiol
, vol.15
, pp. 150-155
-
-
Smith, K.S.1
Ingram-Smith, C.2
-
55
-
-
77955273494
-
Distinct gene set in two different lineages of ammonia-oxidizing Archaea supports the phylum Thaumarchaeota
-
PID: 20598889
-
Spang A, Hatzenpichler R, Brochier-Armanet C, Rattei T, Tischler P, Spieck E, Streit W, Stahl DA, Wagner M, Schleper C (2010) Distinct gene set in two different lineages of ammonia-oxidizing Archaea supports the phylum Thaumarchaeota. Trends Microbiol 18:331–340
-
(2010)
Trends Microbiol
, vol.18
, pp. 331-340
-
-
Spang, A.1
Hatzenpichler, R.2
Brochier-Armanet, C.3
Rattei, T.4
Tischler, P.5
Spieck, E.6
Streit, W.7
Stahl, D.A.8
Wagner, M.9
Schleper, C.10
-
56
-
-
84903815874
-
Isolation and differentiation of methanogenic Archaea from mesophilic corn-fed on-farm biogas plants with special emphasis on the genus Methanobacterium
-
PID: 24639207
-
Stantscheff R, Kuever J, Rabenstein A, Seyfarth K, Droge S, Konig H (2014) Isolation and differentiation of methanogenic Archaea from mesophilic corn-fed on-farm biogas plants with special emphasis on the genus Methanobacterium. Appl Microbiol Biotechnol 98:5719–5735
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 5719-5735
-
-
Stantscheff, R.1
Kuever, J.2
Rabenstein, A.3
Seyfarth, K.4
Droge, S.5
Konig, H.6
-
57
-
-
84910014449
-
Community structure and distribution of planktonic ammonia-oxidizing archaea and bacteria in the Dongjiang River, China
-
PID: 25148780
-
Sun W, Xia CY, Xu MY, Guo J, Sun GP, Wang AJ (2014) Community structure and distribution of planktonic ammonia-oxidizing archaea and bacteria in the Dongjiang River, China. Res Microbiol 165:657–670
-
(2014)
Res Microbiol
, vol.165
, pp. 657-670
-
-
Sun, W.1
Xia, C.Y.2
Xu, M.Y.3
Guo, J.4
Sun, G.P.5
Wang, A.J.6
-
58
-
-
84925537912
-
Microbial community analysis in rice paddy soils irrigated by acid mine drainage contaminated water
-
PID: 25408313
-
Sun M, Xiao TF, Ning ZP, Xiao EZ, Sun WM (2015) Microbial community analysis in rice paddy soils irrigated by acid mine drainage contaminated water. Appl Microbiol Biotechnol 99:2911–2922
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 2911-2922
-
-
Sun, M.1
Xiao, T.F.2
Ning, Z.P.3
Xiao, E.Z.4
Sun, W.M.5
-
59
-
-
84891657200
-
Application of a constructed wetland system for polluted stream remediation
-
Tu YT, Chiang PC, Yang J, Chen SH, Kao CM (2014) Application of a constructed wetland system for polluted stream remediation. J Hydrol 510:70–78
-
(2014)
J Hydrol
, vol.510
, pp. 70-78
-
-
Tu, Y.T.1
Chiang, P.C.2
Yang, J.3
Chen, S.H.4
Kao, C.M.5
-
60
-
-
84893731405
-
Simazine biodegradation and community structures of ammonia-oxidizing microorganisms in bioaugmented soil: impact of ammonia and nitrate nitrogen sources
-
Wan R, Yang YY, Sun WM, Wang Z, Xie SG (2014) Simazine biodegradation and community structures of ammonia-oxidizing microorganisms in bioaugmented soil: impact of ammonia and nitrate nitrogen sources. Environ Sci Pollut Res 21:3175–3181
-
(2014)
Environ Sci Pollut Res
, vol.21
, pp. 3175-3181
-
-
Wan, R.1
Yang, Y.Y.2
Sun, W.M.3
Wang, Z.4
Xie, S.G.5
-
61
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
PID: 17586664
-
Wang Q, Garrity GM, Tiedje JM, Cole JR (2007) Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73:5261–5267
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
62
-
-
84925539773
-
Change of microbial community structure and functional gene abundance in nonylphenol-degrading sediment
-
PID: 25421563
-
Wang Z, Yang YY, He T, Xie SG (2015a) Change of microbial community structure and functional gene abundance in nonylphenol-degrading sediment. Appl Microbiol Biotechnol 99:3259–3268
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 3259-3268
-
-
Wang, Z.1
Yang, Y.Y.2
He, T.3
Xie, S.G.4
-
63
-
-
84937975115
-
Nonylphenol biodegradation, functional gene abundance and bacterial community in bioaugmented sediment: effect of external carbon source
-
Wang Z, Dai Y, Zhao Q, Li NN, Zhou QH, Xie SG (2015b) Nonylphenol biodegradation, functional gene abundance and bacterial community in bioaugmented sediment: effect of external carbon source. Environ Sci Pollut Res 22:12083–12091
-
(2015)
Environ Sci Pollut Res
, vol.22
, pp. 12083-12091
-
-
Wang, Z.1
Dai, Y.2
Zhao, Q.3
Li, N.N.4
Zhou, Q.H.5
Xie, S.G.6
-
64
-
-
46149087251
-
Methanobrevibacter phylotypes are the dominant methanogens in sheep from Venezuela
-
PID: 18165875
-
Wright ADG, Ma XL, Obispo NE (2008) Methanobrevibacter phylotypes are the dominant methanogens in sheep from Venezuela. Microb Ecol 56:390–394
-
(2008)
Microb Ecol
, vol.56
, pp. 390-394
-
-
Wright, A.D.G.1
Ma, X.L.2
Obispo, N.E.3
-
65
-
-
84925467328
-
Biofilm bacterial communities in urban drinking water distribution systems transporting waters with different purification strategies
-
PID: 25253043
-
Wu HT, Zhang JX, Mi ZL, Xie SG, Chen C, Zhang XJ (2015) Biofilm bacterial communities in urban drinking water distribution systems transporting waters with different purification strategies. Appl Microbiol Biotechnol 99:1947–1955
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 1947-1955
-
-
Wu, H.T.1
Zhang, J.X.2
Mi, Z.L.3
Xie, S.G.4
Chen, C.5
Zhang, X.J.6
-
66
-
-
84906944377
-
Salinity-dominated change in community structure and ecological function of Archaea from the lower Pearl River to coastal South China Sea
-
PID: 24880629
-
Xie W, Zhang CL, Zhou XD, Wang P (2014) Salinity-dominated change in community structure and ecological function of Archaea from the lower Pearl River to coastal South China Sea. Appl Microbiol Biotechnol 98:7971–7982
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 7971-7982
-
-
Xie, W.1
Zhang, C.L.2
Zhou, X.D.3
Wang, P.4
-
67
-
-
84923846029
-
A paddy eco-ditch and wetland system to reduce non-point source pollution from rice-based production system while maintaining water use efficiency
-
Xiong YJ, Peng SZ, Luo YF, Xu JZ, Yang SH (2015) A paddy eco-ditch and wetland system to reduce non-point source pollution from rice-based production system while maintaining water use efficiency. Environ Sci Pollut Res 22:4406–4417
-
(2015)
Environ Sci Pollut Res
, vol.22
, pp. 4406-4417
-
-
Xiong, Y.J.1
Peng, S.Z.2
Luo, Y.F.3
Xu, J.Z.4
Yang, S.H.5
-
68
-
-
84902342672
-
Performance of the subsurface flow constructed wetlands for pretreatment of slightly polluted source water
-
PID: 24497042
-
Yang X, Zhang XP, Wang JF, Zhao GY, Wang BJ (2014) Performance of the subsurface flow constructed wetlands for pretreatment of slightly polluted source water. Ecotoxicology 23:699–706
-
(2014)
Ecotoxicology
, vol.23
, pp. 699-706
-
-
Yang, X.1
Zhang, X.P.2
Wang, J.F.3
Zhao, G.Y.4
Wang, B.J.5
-
69
-
-
84938201156
-
Sediment bacterial communities associated with anaerobic biodegradation of bisphenol A
-
PID: 25501890
-
Yang YY, Wang Z, He T, Dai Y, Xie SG (2015) Sediment bacterial communities associated with anaerobic biodegradation of bisphenol A. Microb Ecol 70:97–104
-
(2015)
Microb Ecol
, vol.70
, pp. 97-104
-
-
Yang, Y.Y.1
Wang, Z.2
He, T.3
Dai, Y.4
Xie, S.G.5
-
70
-
-
78650046547
-
Methanoregula formicica sp. nov., a methane-producing archaeon isolated from methanogenic sludge
-
PID: 19667393
-
Yashiro Y, Sakai S, Ehara M, Miyazaki M, Yamaguchi T, Imachi H (2011) Methanoregula formicica sp. nov., a methane-producing archaeon isolated from methanogenic sludge. Int J Syst Evol Microbiol 61:53–59
-
(2011)
Int J Syst Evol Microbiol
, vol.61
, pp. 53-59
-
-
Yashiro, Y.1
Sakai, S.2
Ehara, M.3
Miyazaki, M.4
Yamaguchi, T.5
Imachi, H.6
-
71
-
-
84932194401
-
Metabolic engineering of Clostridium tyrobutyricum for n-butanol production from maltose and soluble starch by overexpressing alpha-glucosidase
-
PID: 26002632
-
Yu L, Xu MM, Tang IC, Yang ST (2015) Metabolic engineering of Clostridium tyrobutyricum for n-butanol production from maltose and soluble starch by overexpressing alpha-glucosidase. Appl Microbiol Biotechnol 99:6155–6165
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 6155-6165
-
-
Yu, L.1
Xu, M.M.2
Tang, I.C.3
Yang, S.T.4
-
72
-
-
84904572570
-
Bacterial community structure in two permafrost wetlands on the Tibetan Plateau and Sanjiang Plain, China
-
PID: 24718907
-
Yun JL, Ju YW, Deng YC, Zhang HX (2014) Bacterial community structure in two permafrost wetlands on the Tibetan Plateau and Sanjiang Plain, China. Microb Ecol 68:360–369
-
(2014)
Microb Ecol
, vol.68
, pp. 360-369
-
-
Yun, J.L.1
Ju, Y.W.2
Deng, Y.C.3
Zhang, H.X.4
-
73
-
-
77955474134
-
Diversity and community structure of archaea in deep subsurface sediments from the tropical western Pacific
-
PID: 20024655
-
Zhang W, Saren GW, Li TG, Yu XK, Zhang LB (2010) Diversity and community structure of archaea in deep subsurface sediments from the tropical western Pacific. Curr Microbiol 60:439–445
-
(2010)
Curr Microbiol
, vol.60
, pp. 439-445
-
-
Zhang, W.1
Saren, G.W.2
Li, T.G.3
Yu, X.K.4
Zhang, L.B.5
-
74
-
-
84919935308
-
Pyrosequencing analysis of bacterial community and assembly in activated sludge samples from different geographic regions in China
-
PID: 25022664
-
Zhao DY, Huang R, Zeng J, Yu ZB, Liu P, Cheng SP, Wu QLL (2014) Pyrosequencing analysis of bacterial community and assembly in activated sludge samples from different geographic regions in China. Appl Microbiol Biotechnol 98:9119–9128
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 9119-9128
-
-
Zhao, D.Y.1
Huang, R.2
Zeng, J.3
Yu, Z.B.4
Liu, P.5
Cheng, S.P.6
Wu, Q.L.L.7
-
75
-
-
84898605373
-
Hybrid constructed wetlands for highly polluted river water treatment and comparison of surface- and subsurface-flow cells
-
Zheng YC, Wang XC, Xiong JQ, Liu YJ, Zhao YQ (2014) Hybrid constructed wetlands for highly polluted river water treatment and comparison of surface- and subsurface-flow cells. J Environ Sci 26:749–756
-
(2014)
J Environ Sci
, vol.26
, pp. 749-756
-
-
Zheng, Y.C.1
Wang, X.C.2
Xiong, J.Q.3
Liu, Y.J.4
Zhao, Y.Q.5
-
76
-
-
84868249888
-
Constructed wetlands, 1991–2011: a review of research development, current trends, and future directions
-
PID: 23134766
-
Zhi W, Ji GD (2012) Constructed wetlands, 1991–2011: a review of research development, current trends, and future directions. Sci Total Environ 441:19–27
-
(2012)
Sci Total Environ
, vol.441
, pp. 19-27
-
-
Zhi, W.1
Ji, G.D.2
-
77
-
-
84939987585
-
Spatial distribution and diversity of microbial community in large-scale constructed wetland of the Liao River Conservation Area
-
Zhi EQ, Song YH, Duan L, Yu HB, Peng JF (2015) Spatial distribution and diversity of microbial community in large-scale constructed wetland of the Liao River Conservation Area. Environ Earth Sci 73:5085–5094
-
(2015)
Environ Earth Sci
, vol.73
, pp. 5085-5094
-
-
Zhi, E.Q.1
Song, Y.H.2
Duan, L.3
Yu, H.B.4
Peng, J.F.5
-
78
-
-
84911911934
-
Bacterial community analysis by PCR-DGGE and 454-pyrosequencing of horizontal subsurface flow constructed wetlands with front aeration
-
PID: 25213915
-
Zhong F, Wu J, Dai YR, Yang LH, Zhang ZH, Cheng SP, Zhang Q (2015) Bacterial community analysis by PCR-DGGE and 454-pyrosequencing of horizontal subsurface flow constructed wetlands with front aeration. Appl Microbiol Biotechnol 99:1499–1512
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 1499-1512
-
-
Zhong, F.1
Wu, J.2
Dai, Y.R.3
Yang, L.H.4
Zhang, Z.H.5
Cheng, S.P.6
Zhang, Q.7
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