메뉴 건너뛰기




Volumn 56, Issue 2, 2008, Pages 390-394

Methanobrevibacter phylotypes are the dominant methanogens in sheep from Venezuela

Author keywords

[No Author keywords available]

Indexed keywords

ARCHAEAL DNA; RIBOSOME DNA; RNA 16S;

EID: 46149087251     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-007-9351-x     Document Type: Article
Times cited : (89)

References (20)
  • 1
    • 6944229899 scopus 로고    scopus 로고
    • Examining diversity of free living methanogens and those associated with protozoa in the rumen
    • Christophersen CT, Wright A-DG, Vercoe PE (2004) Examining diversity of free living methanogens and those associated with protozoa in the rumen. J Anim Feed Sci 13:51-54
    • (2004) J Anim Feed Sci , vol.13 , pp. 51-54
    • Christophersen, C.T.1    A-Dg, W.2    Vercoe, P.E.3
  • 2
    • 0027732016 scopus 로고
    • DCSE, an interactive tool for sequence alignment and secondary structure research
    • de Rijk P, de Wachter R (1993) DCSE, an interactive tool for sequence alignment and secondary structure research. Comput Appl Biosci 9:735-740
    • (1993) Comput Appl Biosci , vol.9 , pp. 735-740
    • De Rijk, P.1    De Wachter, R.2
  • 4
    • 5044240973 scopus 로고    scopus 로고
    • Bellerophon: A program to detect chimeric sequences in multiple sequence alignments
    • Huber T, Faulkner G, Hugenholtz P (2004) Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20:2317-2319
    • (2004) Bioinformatics , vol.20 , pp. 2317-2319
    • Huber, T.1    Faulkner, G.2    Hugenholtz, P.3
  • 5
    • 11044237974 scopus 로고    scopus 로고
    • Detection of methanogens and proteobacteria from a single cell of rumen ciliate protozoa
    • Irbis C, Ushida K (2004) Detection of methanogens and proteobacteria from a single cell of rumen ciliate protozoa. J Gen Appl Microbiol 50:203-212
    • (2004) J Gen Appl Microbiol , vol.50 , pp. 203-212
    • Irbis, C.1    Ushida, K.2
  • 6
    • 0019296687 scopus 로고
    • A simple method of estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M (1980) A simple method of estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 7
    • 0000773048 scopus 로고
    • Methanogens in human and animal digestive tracts
    • Miller TL, Wolin MJ (1986) Methanogens in human and animal digestive tracts. Syst Appl Microbiol 7:223-229
    • (1986) Syst Appl Microbiol , vol.7 , pp. 223-229
    • Miller, T.L.1    Wolin, M.J.2
  • 9
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for constructing phylogenetic trees
    • Saito N, Nei M (1987) The neighbor-joining method: a new method for constructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saito, N.1    Nei, M.2
  • 10
    • 0032080814 scopus 로고    scopus 로고
    • Taxon-specific associations between protozoal and methanogen populations in the rumen and a model system
    • Sharp R, Ziemer CJ, Marshall DS, Stahl DA (1998) Taxon-specific associations between protozoal and methanogen populations in the rumen and a model system. FEMS Microbiol Ecol 26:71-78
    • (1998) FEMS Microbiol Ecol , vol.26 , pp. 71-78
    • Sharp, R.1    Ziemer, C.J.2    Marshall, D.S.3    Stahl, D.A.4
  • 11
    • 33645227626 scopus 로고    scopus 로고
    • 16S rDNA directed PCR primers and detection of methanogens in the bovine rumen
    • Skillman LC, Evans PN, Strompl C, Joblin KN (2006) 16S rDNA directed PCR primers and detection of methanogens in the bovine rumen. Lett Appl Microbiol 42:222-228
    • (2006) Lett Appl Microbiol , vol.42 , pp. 222-228
    • Skillman, L.C.1    Evans, P.N.2    Strompl, C.3    Joblin, K.N.4
  • 12
    • 4544357886 scopus 로고    scopus 로고
    • 16S ribosomal DNA-directed PCR primers for ruminal methanogens and identification of methanogens colonising young lambs
    • Skillman LC, Evans PN, Naylor GE, Morvan B, Jarvis GN, Joblin KN (2004) 16S ribosomal DNA-directed PCR primers for ruminal methanogens and identification of methanogens colonising young lambs. Anaerobe 10:277-285
    • (2004) Anaerobe , vol.10 , pp. 277-285
    • Skillman, L.C.1    Evans, P.N.2    Naylor, G.E.3    Morvan, B.4    Jarvis, G.N.5    Joblin, K.N.6
  • 13
    • 15244351941 scopus 로고    scopus 로고
    • Characterisation of the microbial diversity in a pig manure storage pit using small subunit rDNA sequence analysis
    • Snell-Castro R, Godon JJ, Delgenes JP, Dabert P (2005) Characterisation of the microbial diversity in a pig manure storage pit using small subunit rDNA sequence analysis. FEMS Microbiol Ecol 52:229-242
    • (2005) FEMS Microbiol Ecol , vol.52 , pp. 229-242
    • Snell-Castro, R.1    Godon, J.J.2    Delgenes, J.P.3    Dabert, P.4
  • 14
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA:DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA:DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846-849
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 15
    • 0035849668 scopus 로고    scopus 로고
    • Phylogenetic analysis of archaeal 16S rRNA libraries from the rumen suggests the existence of a novel group of archaea not associated with known methanogens
    • Tajima K, Nagamine T, Matsui H, Nakamura M, Rustam I, Aminov RI (2001) Phylogenetic analysis of archaeal 16S rRNA libraries from the rumen suggests the existence of a novel group of archaea not associated with known methanogens. FEMS Microbiol Lett 200:67-72
    • (2001) FEMS Microbiol Lett , vol.200 , pp. 67-72
    • Tajima, K.1    Nagamine, T.2    Matsui, H.3    Nakamura, M.4    Rustam, I.5    Aminov, R.I.6
  • 16
    • 0032842306 scopus 로고    scopus 로고
    • Phylogenetic study of methanogens associated with rumen ciliates
    • Tokura M, Chagan I, Ushida K, Kojima Y (1999) Phylogenetic study of methanogens associated with rumen ciliates. Curr Microbiol 39:123-128
    • (1999) Curr Microbiol , vol.39 , pp. 123-128
    • Tokura, M.1    Chagan, I.2    Ushida, K.3    Kojima, Y.4
  • 17
    • 3142580313 scopus 로고    scopus 로고
    • Phylogenetic analysis of methanogens from the bovine rumen
    • Whitford MF, Teather RM, Forster RJ (2001) Phylogenetic analysis of methanogens from the bovine rumen. BMC Microbiol 1:5
    • (2001) BMC Microbiol , vol.1 , pp. 5
    • Whitford, M.F.1    Teather, R.M.2    Forster, R.J.3
  • 18
    • 0141643392 scopus 로고    scopus 로고
    • Improved strategy for presumptive identification of methanogens using 16S riboprinting
    • Wright A-DG, Pimm C (2003) Improved strategy for presumptive identification of methanogens using 16S riboprinting. J Microbiol Methods 55:337-349
    • (2003) J Microbiol Methods , vol.55 , pp. 337-349
    • A-Dg, W.1    Pimm, C.2
  • 19
    • 33744800527 scopus 로고    scopus 로고
    • Molecular identification of methanogenic archaea from sheep in Queensland, Australia reveal more uncultured novel archaea
    • Wright A-DG, Toovey AF, Pimm CL (2006) Molecular identification of methanogenic archaea from sheep in Queensland, Australia reveal more uncultured novel archaea. Anaerobe 12:134-139
    • (2006) Anaerobe , vol.12 , pp. 134-139
    • A-Dg, W.1    Toovey, A.F.2    Pimm, C.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.