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Volumn 209, Issue 3, 2016, Pages 1220-1229

Emergence of new virulent populations of apple scab from nonagricultural disease reservoirs

Author keywords

Venturia inaequalis; Approximate Bayesian computation; Environmental reservoirs; Evolutionary epidemiology; Malus domestica; Microsatellites

Indexed keywords

BAYESIAN ANALYSIS; DISEASE CONTROL; DISEASE RESISTANCE; DNA; EPIDEMIOLOGY; FUNGAL DISEASE; FUNGUS; PATHOGEN; VIRULENCE;

EID: 84954396698     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/nph.13658     Document Type: Article
Times cited : (39)

References (73)
  • 1
    • 55249099284 scopus 로고    scopus 로고
    • Life history determines genetic structure and evolutionary potential of host-parasite interactions
    • Barrett LG, Thrall PH, Burdon JJ, Linde CC. 2006. Life history determines genetic structure and evolutionary potential of host-parasite interactions. Trends in Ecology and Evolution 23: 678-685.
    • (2006) Trends in Ecology and Evolution , vol.23 , pp. 678-685
    • Barrett, L.G.1    Thrall, P.H.2    Burdon, J.J.3    Linde, C.C.4
  • 3
    • 0036964474 scopus 로고    scopus 로고
    • Approximate Bayesian computation in population genetics
    • Beaumont MA, Zhang W, Balding DJ. 2002. Approximate Bayesian computation in population genetics. Genetics 162: 2025-2035.
    • (2002) Genetics , vol.162 , pp. 2025-2035
    • Beaumont, M.A.1    Zhang, W.2    Balding, D.J.3
  • 6
    • 79955577378 scopus 로고    scopus 로고
    • The coupling hypothesis: why genome scans may fail to map local adaptation genes
    • Bierne N, Welch J, Loire E, Bonhomme F, David P. 2011. The coupling hypothesis: why genome scans may fail to map local adaptation genes. Molecular Ecology 20: 2044-2072.
    • (2011) Molecular Ecology , vol.20 , pp. 2044-2072
    • Bierne, N.1    Welch, J.2    Loire, E.3    Bonhomme, F.4    David, P.5
  • 7
    • 0027967336 scopus 로고
    • Chance and selection in the evolution of barley mildew
    • Brown JKM. 1994. Chance and selection in the evolution of barley mildew. Trends in Microbiology 12: 470-475.
    • (1994) Trends in Microbiology , vol.12 , pp. 470-475
    • Brown, J.K.M.1
  • 8
    • 80051759269 scopus 로고    scopus 로고
    • Plant-parasite coevolution: bridging the gap between genetics and ecology
    • Brown JKM, Tellier A. 2011. Plant-parasite coevolution: bridging the gap between genetics and ecology. Annual Review of Phytopathology 49: 345-367.
    • (2011) Annual Review of Phytopathology , vol.49 , pp. 345-367
    • Brown, J.K.M.1    Tellier, A.2
  • 10
    • 64449084339 scopus 로고    scopus 로고
    • Pathogen evolution across the agro-ecological interface: implications for management
    • Burdon JJ, Thrall PH. 2008. Pathogen evolution across the agro-ecological interface: implications for management. Evolutionary Applications 1: 57-65.
    • (2008) Evolutionary Applications , vol.1 , pp. 57-65
    • Burdon, J.J.1    Thrall, P.H.2
  • 11
    • 80051768939 scopus 로고    scopus 로고
    • Revision of the nomenclature of the differential host-pathogen interactions of Venturia inaequalis and Malus
    • Bus VG, Rikkerink EH, Caffier V, Durel CE, Plummer KM. 2011. Revision of the nomenclature of the differential host-pathogen interactions of Venturia inaequalis and Malus. Annual Review of Phytopathology 49: 391-413.
    • (2011) Annual Review of Phytopathology , vol.49 , pp. 391-413
    • Bus, V.G.1    Rikkerink, E.H.2    Caffier, V.3    Durel, C.E.4    Plummer, K.M.5
  • 12
    • 60349093708 scopus 로고    scopus 로고
    • Effective population size and patterns of molecular evolution and variation
    • Charlesworth B. 2009. Effective population size and patterns of molecular evolution and variation. Nature Review Genetics 10: 195-205.
    • (2009) Nature Review Genetics , vol.10 , pp. 195-205
    • Charlesworth, B.1
  • 19
    • 0030467571 scopus 로고    scopus 로고
    • Genetics and utilization of pathogen resistance in plants
    • Crute IR, Pink DA. 1996. Genetics and utilization of pathogen resistance in plants. Plant Cell 8: 1747-1755.
    • (1996) Plant Cell , vol.8 , pp. 1747-1755
    • Crute, I.R.1    Pink, D.A.2
  • 21
    • 84866687134 scopus 로고    scopus 로고
    • Molecular cloning and analysis of apple HcrVf resistance gene paralogs in a collection of related species
    • Dunemann F, Gläss R, Bartsch S, Saad Eldin M, Peil A, Bus V. 2012. Molecular cloning and analysis of apple HcrVf resistance gene paralogs in a collection of related species. Tree Genetics and Genomes 8: 1095-1109.
    • (2012) Tree Genetics and Genomes , vol.8 , pp. 1095-1109
    • Dunemann, F.1    Gläss, R.2    Bartsch, S.3    Saad Eldin, M.4    Peil, A.5    Bus, V.6
  • 22
    • 0036718239 scopus 로고    scopus 로고
    • Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis
    • Estoup A, Jarne P, Cornuet JM. 2002. Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis. Molecular Ecology 11: 1591-1604.
    • (2002) Molecular Ecology , vol.11 , pp. 1591-1604
    • Estoup, A.1    Jarne, P.2    Cornuet, J.M.3
  • 23
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
    • Evanno G, Regnaut S, Goudet J. 2005. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology 14: 2611-2620.
    • (2005) Molecular Ecology , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 24
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK. 2003. Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164: 1567-1587.
    • (2003) Genetics , vol.164 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 27
    • 0001525245 scopus 로고
    • Inheritance of pathogenicity in Melampsora lini
    • Flor HH. 1942. Inheritance of pathogenicity in Melampsora lini. Phytopathology 32: 653-669.
    • (1942) Phytopathology , vol.32 , pp. 653-669
    • Flor, H.H.1
  • 28
    • 0000295229 scopus 로고
    • Host-parasite interaction in flax rust - its genetics and other implications
    • Flor HH. 1955. Host-parasite interaction in flax rust - its genetics and other implications. Phytopathology 45: 680-685.
    • (1955) Phytopathology , vol.45 , pp. 680-685
    • Flor, H.H.1
  • 29
    • 0001119910 scopus 로고
    • Current status of the gene-for-gene concept
    • Flor HH. 1971. Current status of the gene-for-gene concept. Annual Review of Phytopathology 9: 275-296.
    • (1971) Annual Review of Phytopathology , vol.9 , pp. 275-296
    • Flor, H.H.1
  • 31
    • 84924411185 scopus 로고    scopus 로고
    • Recent selective sweeps in North American Drosophila melanogaster show signatures of soft sweeps
    • Garud NR, Messer PW, Buzbas EO, Petrov DA. 2015. Recent selective sweeps in North American Drosophila melanogaster show signatures of soft sweeps. PLoS Genetics 11: e1005004.
    • (2015) PLoS Genetics , vol.11 , pp. e1005004
    • Garud, N.R.1    Messer, P.W.2    Buzbas, E.O.3    Petrov, D.A.4
  • 33
    • 77954815758 scopus 로고    scopus 로고
    • Linking the emergence of fungal plant diseases with ecological speciation
    • Giraud T, Gladieux P, Gavrilets S. 2010. Linking the emergence of fungal plant diseases with ecological speciation. Trends in Ecology and Evolution 25: 387-395.
    • (2010) Trends in Ecology and Evolution , vol.25 , pp. 387-395
    • Giraud, T.1    Gladieux, P.2    Gavrilets, S.3
  • 34
    • 33644919661 scopus 로고    scopus 로고
    • Importance of the lifecycle in sympatric host race formation and speciation of pathogens
    • Giraud T, Villaréal LMMA, Austerlitz F, Le Gac M, Lavigne C. 2006. Importance of the lifecycle in sympatric host race formation and speciation of pathogens. Phytopathology 96: 280-287.
    • (2006) Phytopathology , vol.96 , pp. 280-287
    • Giraud, T.1    Villaréal, L.M.M.A.2    Austerlitz, F.3    Le Gac, M.4    Lavigne, C.5
  • 40
    • 2542425773 scopus 로고    scopus 로고
    • Isolation of 21 new polymorphic microsatellite loci in the phytopathogenic fungus Venturia inaequalis
    • Guérin F, Franck P, Loiseau A, Devaux M, Le Cam B. 2004. Isolation of 21 new polymorphic microsatellite loci in the phytopathogenic fungus Venturia inaequalis. Molecular Ecology Notes 4: 268-270.
    • (2004) Molecular Ecology Notes , vol.4 , pp. 268-270
    • Guérin, F.1    Franck, P.2    Loiseau, A.3    Devaux, M.4    Le Cam, B.5
  • 41
    • 33847349677 scopus 로고    scopus 로고
    • Origin and colonization history of newly virulent strains of the phytopathogenic fungus Venturia inaequalis
    • Guérin F, Gladieux P, Le Cam B. 2007. Origin and colonization history of newly virulent strains of the phytopathogenic fungus Venturia inaequalis. Fungal Genetics and Biology 44: 284-292.
    • (2007) Fungal Genetics and Biology , vol.44 , pp. 284-292
    • Guérin, F.1    Gladieux, P.2    Le Cam, B.3
  • 42
    • 1642423784 scopus 로고    scopus 로고
    • Breakdown of the scab resistance gene Vf in apple leads to a founder effect in populations of the fungal pathogen Venturia inaequalis
    • Guérin F, Le Cam B. 2004. Breakdown of the scab resistance gene Vf in apple leads to a founder effect in populations of the fungal pathogen Venturia inaequalis. Phytopathology 94: 364-369.
    • (2004) Phytopathology , vol.94 , pp. 364-369
    • Guérin, F.1    Le Cam, B.2
  • 43
    • 84955349191 scopus 로고
    • A mathematical theory of natural and artificial selection, part V, selection and mutation
    • Haldane JBS. 1927. A mathematical theory of natural and artificial selection, part V, selection and mutation. Proceedings of the Cambridge Philosophical Society 23: 838-844.
    • (1927) Proceedings of the Cambridge Philosophical Society , vol.23 , pp. 838-844
    • Haldane, J.B.S.1
  • 44
    • 34547861256 scopus 로고    scopus 로고
    • CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure
    • Jakobsson M, Rosenberg NA. 2007. CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics 23: 1801-1806.
    • (2007) Bioinformatics , vol.23 , pp. 1801-1806
    • Jakobsson, M.1    Rosenberg, N.A.2
  • 46
    • 0007094102 scopus 로고
    • Man-guided evolution in plant rusts
    • Johnson T. 1961. Man-guided evolution in plant rusts. Science 133: 357-362.
    • (1961) Science , vol.133 , pp. 357-362
    • Johnson, T.1
  • 47
    • 44349095887 scopus 로고    scopus 로고
    • adegenet: a R package for the multivariate analysis of genetic markers
    • Jombart T. 2008. adegenet: a R package for the multivariate analysis of genetic markers. Bioinformatics 24: 1403-1405.
    • (2008) Bioinformatics , vol.24 , pp. 1403-1405
    • Jombart, T.1
  • 48
    • 33751100626 scopus 로고    scopus 로고
    • The plant immune system
    • Jones JD, Dangl JL. 2006. The plant immune system. Nature 444: 323-329.
    • (2006) Nature , vol.444 , pp. 323-329
    • Jones, J.D.1    Dangl, J.L.2
  • 50
    • 77954167479 scopus 로고    scopus 로고
    • Evidence that adaptation in Drosophila is not limited by mutation at single sites
    • Karasov T, Messer PW, Petrov DA. 2010. Evidence that adaptation in Drosophila is not limited by mutation at single sites. PLoS Genetics 6: e1000924.
    • (2010) PLoS Genetics , vol.6 , pp. e1000924
    • Karasov, T.1    Messer, P.W.2    Petrov, D.A.3
  • 51
    • 0036193234 scopus 로고    scopus 로고
    • Evidence of two formae speciales in Venturia inaequalis, responsible for apple and pyracantha scab
    • Le Cam B, Parisi L, Arène L. 2002. Evidence of two formae speciales in Venturia inaequalis, responsible for apple and pyracantha scab. Phytopathology 92: 314-320.
    • (2002) Phytopathology , vol.92 , pp. 314-320
    • Le Cam, B.1    Parisi, L.2    Arène, L.3
  • 53
    • 84951905641 scopus 로고    scopus 로고
    • When virulence originates from non-agricultural hosts: new insights into plant breeding
    • Leroy T, Le Cam B, Lemaire C. 2014. When virulence originates from non-agricultural hosts: new insights into plant breeding. Infection Genetics and Evolution 27: 521-529.
    • (2014) Infection Genetics and Evolution , vol.27 , pp. 521-529
    • Leroy, T.1    Le Cam, B.2    Lemaire, C.3
  • 54
    • 84874805440 scopus 로고    scopus 로고
    • The genetic structure of a Venturia inaequalis population in a heterogeneous host population composed of different Malus species
    • Leroy T, Lemaire C, Dunemann F, Le Cam B. 2013. The genetic structure of a Venturia inaequalis population in a heterogeneous host population composed of different Malus species. BMC Evolutionary Biology 13: 64.
    • (2013) BMC Evolutionary Biology , vol.13 , pp. 64
    • Leroy, T.1    Lemaire, C.2    Dunemann, F.3    Le Cam, B.4
  • 56
    • 71249094735 scopus 로고    scopus 로고
    • How can we achieve durable disease resistance in agricultural ecosystems?
    • McDonald B. 2010. How can we achieve durable disease resistance in agricultural ecosystems? New Phytologist 185: 3-5.
    • (2010) New Phytologist , vol.185 , pp. 3-5
    • McDonald, B.1
  • 58
    • 74549162702 scopus 로고    scopus 로고
    • Expanding the paradigms of plant pathogen life history and evolution of parasitic fitness beyond agricultural boundaries
    • Morris CE, Bardin M, Kinkel LL, Moury B, Nicot PC, Sands DC. 2009. Expanding the paradigms of plant pathogen life history and evolution of parasitic fitness beyond agricultural boundaries. PLoS Pathogens 5: e1000693.
    • (2009) PLoS Pathogens , vol.5 , pp. e1000693
    • Morris, C.E.1    Bardin, M.2    Kinkel, L.L.3    Moury, B.4    Nicot, P.C.5    Sands, D.C.6
  • 59
  • 60
    • 0034920057 scopus 로고    scopus 로고
    • The evolution of postzygotic isolation: accumulating Dobzhansky-Muller incompatibilities
    • Orr HA, Turelli M. 2001. The evolution of postzygotic isolation: accumulating Dobzhansky-Muller incompatibilities. Evolution 55: 1085-1094.
    • (2001) Evolution , vol.55 , pp. 1085-1094
    • Orr, H.A.1    Turelli, M.2
  • 61
    • 0000999519 scopus 로고
    • A new race of Venturia inaequalis virulent to apples with resistance due to the Vf gene
    • Parisi L, Laurens F, Guillaumes J, Kruger J. 1993. A new race of Venturia inaequalis virulent to apples with resistance due to the Vf gene. Phytopathology 83: 533-537.
    • (1993) Phytopathology , vol.83 , pp. 533-537
    • Parisi, L.1    Laurens, F.2    Guillaumes, J.3    Kruger, J.4
  • 62
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 63
    • 0000208052 scopus 로고
    • A scab resistance from Malus floribunda 821 (Vf) is rendered ineffective by isolates of Venturia inaequalis from Malus floribunda
    • Roberts AL, Crute IR. 1994. A scab resistance from Malus floribunda 821 (Vf) is rendered ineffective by isolates of Venturia inaequalis from Malus floribunda. Netherlands Journal of Agricultural Sciences 17: 403-406.
    • (1994) Netherlands Journal of Agricultural Sciences , vol.17 , pp. 403-406
    • Roberts, A.L.1    Crute, I.R.2
  • 66
    • 33846839389 scopus 로고    scopus 로고
    • Origin and domestication of the fungal wheat pathogen Mycosphaerella graminicola via sympatric speciation
    • Stukenbrock EH, Banke S, Javan-Nikkhah M, McDonald BA. 2007. Origin and domestication of the fungal wheat pathogen Mycosphaerella graminicola via sympatric speciation. Molecular Biology and Evolution 24: 398-411.
    • (2007) Molecular Biology and Evolution , vol.24 , pp. 398-411
    • Stukenbrock, E.H.1    Banke, S.2    Javan-Nikkhah, M.3    McDonald, B.A.4
  • 67
    • 84866910358 scopus 로고    scopus 로고
    • A population genomics perspective on the emergence and adaptation of new plant pathogens in agro-ecosystems
    • Stukenbrock EH, Bataillon T. 2012. A population genomics perspective on the emergence and adaptation of new plant pathogens in agro-ecosystems. PLoS Pathogens 8: e1002893.
    • (2012) PLoS Pathogens , vol.8 , pp. e1002893
    • Stukenbrock, E.H.1    Bataillon, T.2
  • 68
    • 54949147974 scopus 로고    scopus 로고
    • ADZE: a rarefaction approach for counting alleles private to combinations of populations
    • Szpiech A, Jakobsson M, Rosenberg N. 2008. ADZE: a rarefaction approach for counting alleles private to combinations of populations. Bioinformatics 24: 2498-2504.
    • (2008) Bioinformatics , vol.24 , pp. 2498-2504
    • Szpiech, A.1    Jakobsson, M.2    Rosenberg, N.3
  • 69
    • 0344549185 scopus 로고    scopus 로고
    • Identification of microsatellite markers and their application to population genetics of Venturia inaequalis
    • Tenzer I, Degli Ivanissevich S, Morgante M, Gessler C. 1999. Identification of microsatellite markers and their application to population genetics of Venturia inaequalis. Phytopathology 89: 748-753.
    • (1999) Phytopathology , vol.89 , pp. 748-753
    • Tenzer, I.1    Degli Ivanissevich, S.2    Morgante, M.3    Gessler, C.4
  • 71
    • 80052599389 scopus 로고    scopus 로고
    • Local origin of two vegetative compatibility groups of Fusarium oxysporum f. sp. vasinfectum in Australia
    • Wang B, Brubaker CL, Summerell BA, Thrall PH, Burdon JJ. 2010. Local origin of two vegetative compatibility groups of Fusarium oxysporum f. sp. vasinfectum in Australia. Evolutionary Applications 3: 505-524.
    • (2010) Evolutionary Applications , vol.3 , pp. 505-524
    • Wang, B.1    Brubaker, C.L.2    Summerell, B.A.3    Thrall, P.H.4    Burdon, J.J.5
  • 72
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 73
    • 24944527490 scopus 로고    scopus 로고
    • Variation for neutral markers is correlated with variation for quantitative traits in the plant pathogenic fungus Mycosphaerella graminicola
    • Zhan J, Linde CC, Jürgens T, Merz U, Steinebrunner F, McDonald BA. 2005. Variation for neutral markers is correlated with variation for quantitative traits in the plant pathogenic fungus Mycosphaerella graminicola. Molecular Ecology 14: 2683-2693.
    • (2005) Molecular Ecology , vol.14 , pp. 2683-2693
    • Zhan, J.1    Linde, C.C.2    Jürgens, T.3    Merz, U.4    Steinebrunner, F.5    McDonald, B.A.6


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