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Volumn 108, Issue 2, 2015, Pages 473-482

Bounagaea algeriensis gen. nov sp. nov an extremely halophilic actinobacterium isolated from a Saharan soil of Algeria

Author keywords

Algerian Sahara; Bounagaea algeriensis gen. nov sp. nov; Halophilic actinobacterium; Polyphasic taxonomy

Indexed keywords

ARABINOSE; DIAMINOPIMELIC ACID; FATTY ACID; GALACTOSE; MENAQUINONE; PHOSPHATIDYLCHOLINE; RNA 16S; BACTERIAL DNA; CULTURE MEDIUM; FARNOQUINONE; PHOSPHOLIPID; RIBOSOME DNA; SODIUM CHLORIDE;

EID: 84954392209     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-015-0500-9     Document Type: Article
Times cited : (12)

References (50)
  • 1
    • 78651158157 scopus 로고
    • Rapid differentiation between Nocardia and Streptomyces by paper chromatography of whole-cell hydrolysates
    • COI: 1:STN:280:DyaF2M%2FitVeltw%3D%3D
    • Becker Lechevalier M Gordon R Lechevalier HA (1964) Rapid differentiation between Nocardia and Streptomyces by paper chromatography of whole-cell hydrolysates. J Appl Microbiol 12:421–423
    • (1964) J Appl Microbiol , vol.12 , pp. 421-423
    • Becker, B.1    Lechevalier, M.P.2    Gordon, R.E.3    Lechevalier, H.A.4
  • 3
    • 0033803806 scopus 로고    scopus 로고
    • Nocardiopsis kunsanensis sp. nov a moderately halophilic actinomycete isolated from a saltern
    • COI: 1:CAS:528:DC%2BD3cXns1Sltrg%3 PID: 11034504
    • Chun Bae K Moon E Jung S Lee H Kim SJ (2000) Nocardiopsis kunsanensis sp. nov a moderately halophilic actinomycete isolated from a saltern. Int J Syst Evol Microbiol 50:1909–1913
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 1909-1913
    • Chun, J.1    Bae, K.S.2    Moon, E.Y.3    Jung, S.O.4    Lee, H.K.5    Kim, S.J.6
  • 4
    • 0032902329 scopus 로고    scopus 로고
    • Classification of Alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. nov
    • PID: 10319461
    • Coenye Falsen Vancanneyt Hoste Govan J Kersters Vandamme P (1999) Classification of Alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. nov. Int J Syst Bacteriol 49:405–413
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 405-413
    • Coenye, T.1    Falsen, E.2    Vancanneyt, M.3    Hoste, B.4    Govan, J.R.5    Kersters, K.6    Vandamme, P.7
  • 5
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: a maximum likelihood approach
    • COI: 1:CAS:528:DyaL3MXls1Cisr8%3 PID: 7288891
    • Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17:368–376
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 6
    • 84969387983 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 7
    • 0002918460 scopus 로고
    • On the problem of discovering the most parsimonious tree
    • Fitch WM (1977) On the problem of discovering the most parsimonious tree. Am Nat 111:223–257
    • (1977) Am Nat , vol.111 , pp. 223-257
    • Fitch, W.M.1
  • 8
    • 0015148670 scopus 로고
    • Numerical taxonomy of some nocardioform bacteria
    • COI: 1:STN:280:DyaE387osVeksg%3D%3 PID: 4948190
    • Goodfellow M (1971) Numerical taxonomy of some nocardioform bacteria. J Gen Microbiol 69:33–90
    • (1971) J Gen Microbiol , vol.69 , pp. 33-90
    • Goodfellow, M.1
  • 9
    • 84910020401 scopus 로고    scopus 로고
    • Family I. Actinopolysporaceae
    • Goodfellow Kämpfer Busse H- Trujillo M Suzuki K- Ludwig Whitman W (eds Springe New York
    • Goodfellow Trujillo ME (2012) Family I. Actinopolysporaceae. In: Goodfellow Kämpfer Busse H- Trujillo M Suzuki K- Ludwig Whitman WB (eds) Bergey’s manual of systematic bacteriolog vol 5. Springe New Yor pp 163–170
    • (2012) Bergey’s manual of systematic bacteriology , pp. 163-170
    • Goodfellow, M.1    Trujillo, M.E.2
  • 10
    • 0017376391 scopus 로고
    • Resistance to rifampicin and lysozyme of strains of some species of Mycobacterium and Nocardia as a taxonomic tool
    • COI: 1:CAS:528:DyaE2sXltFCntLg%3D
    • Gordon R Barnett DA (1977) Resistance to rifampicin and lysozyme of strains of some species of Mycobacterium and Nocardia as a taxonomic tool. Int J Syst Bacteriol 27:176–178
    • (1977) Int J Syst Bacteriol , vol.27 , pp. 176-178
    • Gordon, R.E.1    Barnett, D.A.2
  • 12
    • 84871462006 scopus 로고    scopus 로고
    • Systematic and biotechnological aspects of halophilic and halotolerant actinomycetes
    • COI: 1:CAS:528:DC%2BC38XhvFSiu7bP
    • Hamedi Mohammadipanah Ventosa A (2013) Systematic and biotechnological aspects of halophilic and halotolerant actinomycetes. Antonie Van Leeuwenhoek 17:1–13
    • (2013) Antonie Van Leeuwenhoek , vol.17 , pp. 1-13
    • Hamedi, J.1    Mohammadipanah, F.2    Ventosa, A.3
  • 14
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Munro H (ed Academic Pres New York
    • Jukes T Cantor CR (1969) Evolution of protein molecules. In: Munro HN (ed) Mammalian protein metabolis vol 3. Academic Pres New Yor pp 21–132
    • (1969) Mammalian protein metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 17
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • COI: 1:CAS:528:DyaL3MXmtFSktg%3D%3 PID: 7463489
    • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 18
    • 0001440003 scopus 로고
    • Separation of bacterial menaquinones by HPLC using reverse phase (RP18) and a silver loaded ion exchanger as stationary phases
    • COI: 1:CAS:528:DyaL3sXmvVaitg%3D%3D
    • Kroppenstedt RM (1982) Separation of bacterial menaquinones by HPLC using reverse phase (RP18) and a silver loaded ion exchanger as stationary phases. J Liq Chromatogr 5:2359–2367
    • (1982) J Liq Chromatogr , vol.5 , pp. 2359-2367
    • Kroppenstedt, R.M.1
  • 19
    • 0001579749 scopus 로고
    • Fatty acid and menaquinone analysis of actinomycetes and related organisms
    • Goodfellow Minnikin D (eds Academic Pres London
    • Kroppenstedt RM (1985) Fatty acid and menaquinone analysis of actinomycetes and related organisms. In: Goodfellow Minnikin DE (eds) Chemical methods in bacterial systematics. Academic Pres Londo pp 173–179
    • (1985) Chemical methods in bacterial systematics , pp. 173-179
    • Kroppenstedt, R.M.1
  • 20
    • 84924953843 scopus 로고    scopus 로고
    • Family I. Pseudonocardiaceae
    • Goodfellow Kämpfer Busse H- Trujillo M Suzuki K- Ludwig Whitman W (eds Springe New Yor Dordrech Heidelber London
    • Labeda D Goodfellow M (2012) Family I. Pseudonocardiaceae. In: Goodfellow Kämpfer Busse H- Trujillo M Suzuki K- Ludwig Whitman WB (eds) Bergey’s manual of systematic bacteriolog vol 5. Springe New Yor Dordrech Heidelber Londo pp 1302–1445
    • (2012) Bergey’s manual of systematic bacteriology , pp. 1302-1445
    • Labeda, D.P.1    Goodfellow, M.2
  • 23
    • 0002044672 scopus 로고
    • Chemical composition as a criterion in the classification of aerobic actinomycetes
    • Lechevalier M Lechevalier HA (1970) Chemical composition as a criterion in the classification of aerobic actinomycetes. Int J Syst Bacteriol 34:435–444
    • (1970) Int J Syst Bacteriol , vol.34 , pp. 435-444
    • Lechevalier, M.P.1    Lechevalier, H.A.2
  • 24
    • 0000888174 scopus 로고
    • Chemotaxonomy of aerobic actinomycetes: phospholipid composition
    • COI: 1:CAS:528:DyaE1cXhtleitLY%3D
    • Lechevalier M de Bièvre Lechevalier HA (1977) Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem Syst Ecol 5:249–260
    • (1977) Biochem Syst Ecol , vol.5 , pp. 249-260
    • Lechevalier, M.P.1    de Bièvre, C.2    Lechevalier, H.A.3
  • 25
    • 0343503033 scopus 로고    scopus 로고
    • Rapid mini-preparation of fungal DNA for PCR
    • COI: 1:STN:280:DC%2BD3c7kt1OisQ%3D%3 PID: 10681211
    • Liu Coloe Baird Pedersen J (2000) Rapid mini-preparation of fungal DNA for PCR. J Clin Microbiol 38:471
    • (2000) J Clin Microbiol , vol.38 , pp. 471
    • Liu, D.1    Coloe, S.2    Baird, R.3    Pedersen, J.4
  • 32
    • 84899705661 scopus 로고    scopus 로고
    • Saccharopolyspora ghardaiensis sp. nov an extremely halophilic actinomycete isolated from Algerian Saharan soil
    • COI: 1:CAS:528:DC%2BC2cXmvV2ltrs%3D
    • Meklat Bouras Zitouni Sabaou Mathieu Schumann Spröer Klenk HP (2014a) Saccharopolyspora ghardaiensis sp. nov an extremely halophilic actinomycete isolated from Algerian Saharan soil. J Antibiotics 67:299–303
    • (2014) J Antibiotics , vol.67 , pp. 299-303
    • Meklat, A.1    Bouras, N.2    Zitouni, A.3    Sabaou, N.4    Mathieu, F.5    Schumann, P.6    Spröer, C.7    Klenk, H.P.8
  • 34
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • COI: 1:CAS:528:DyaL1MXltFWku7o%3D
    • Mesbah Premachandran Whitman WB (1989) Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159–167
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 35
    • 0017376921 scopus 로고
    • Polar lipid composition in the classification of Nocardia and related bacteria
    • COI: 1:CAS:528:DyaE2sXktlGmtL4%3D
    • Minnikin D Patel P Alshamaony Goodfellow M (1977) Polar lipid composition in the classification of Nocardia and related bacteria. Int J Syst Bacteriol 27:104–117
    • (1977) Int J Syst Bacteriol , vol.27 , pp. 104-117
    • Minnikin, D.E.1    Patel, P.V.2    Alshamaony, L.3    Goodfellow, M.4
  • 36
    • 0018834020 scopus 로고
    • Thin layer chromatography of methanolysates of mycolic acid-containing bacteria
    • COI: 1:CAS:528:DyaL3cXhtVKksrg%3D
    • Minnikin D Hutchinson I Caldicott A Goodfellow M (1980) Thin layer chromatography of methanolysates of mycolic acid-containing bacteria. J Chromatogr A 188:221–233
    • (1980) J Chromatogr A , vol.188 , pp. 221-233
    • Minnikin, D.E.1    Hutchinson, I.G.2    Caldicott, A.B.3    Goodfellow, M.4
  • 38
    • 0029799968 scopus 로고    scopus 로고
    • The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov
    • COI: 1:STN:280:DyaK2s%2Fhs1yitg%3D%3 PID: 8863440
    • Rainey F Ward-Rainey Kroppenstedt R Stackebrandt E (1996) The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int J Syst Bacteriol 46:1088–1092
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 1088-1092
    • Rainey, F.A.1    Ward-Rainey, N.2    Kroppenstedt, R.M.3    Stackebrandt, E.4
  • 39
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • COI: 1:STN:280:DyaL1c7ovFSjsA%3D%3 PID: 3447015
    • Saitou Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 40
    • 84910011783 scopus 로고    scopus 로고
    • Mzabimyces algeriensis gen. nov sp. nov a halophilic filamentous actinobacterium isolated from a Saharan soi and proposal of Mzabimycetaceae fam. nov
    • COI: 1:CAS:528:DC%2BC2cXhsFelurj PID: 25186951
    • Saker Bouras Zitouni Ghoul Rohde Schumann Spröer Sabaou Klenk HP (2014) Mzabimycesalgeriensis gen. nov sp. nov a halophilic filamentous actinobacterium isolated from a Saharan soi and proposal of Mzabimycetaceae fam. nov. Antonie Van Leeuwenhoek 106:1021–1030
    • (2014) Antonie Van Leeuwenhoek , vol.106 , pp. 1021-1030
    • Saker, R.1    Bouras, N.2    Zitouni, A.3    Ghoul, M.4    Rohde, M.5    Schumann, P.6    Spröer, C.7    Sabaou, N.8    Klenk, H.P.9
  • 41
    • 84925506441 scopus 로고    scopus 로고
    • Actinopolyspora biskrensis sp. nov a novel halophilic actinomycete isolated from northern Sahara
    • COI: 1:CAS:528:DC%2BC2cXhvF2jtb%2F PID: 25429761
    • Saker Bouras Meklat Zitouni Schumann Spröer Klenk H Sabaou N (2015) Actinopolyspora biskrensis sp. nov a novel halophilic actinomycete isolated from northern Sahara. Curr Microbiol 70:423–428
    • (2015) Curr Microbiol , vol.70 , pp. 423-428
    • Saker, R.1    Bouras, N.2    Meklat, A.3    Zitouni, A.4    Schumann, P.5    Spröer, C.6    Klenk, H.P.7    Sabaou, N.8
  • 42
    • 0001859086 scopus 로고
    • Identification of bacteria by gas chromatography of cellular fatty acids
    • Microbial I Newark
    • Sasser M (1990) Identification of bacteria by gas chromatography of cellular fatty acids. Technical note 101. Microbial I Newark
    • (1990) Technical note 101
    • Sasser, M.1
  • 43
    • 84969385094 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling E Gottlieb D (1966) Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16:313–340
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 44
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihoo evolutionary distanc and maximum parsimony methods
    • COI: 1:CAS:528:DC%2BC3MXht1eiu73 PID: 21546353
    • Tamura Peterson Peterson Stecher Nei Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihoo evolutionary distanc and maximum parsimony methods. Mol Biol Evol 28:2731–2739
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 45
    • 84875754236 scopus 로고    scopus 로고
    • Isolation and characterization of new p-Terphenyls with antifunga antibacteria and antioxidant activities from halophilic actinomycete Nocardiopsis gilva YIM 90087
    • COI: 1:CAS:528:DC%2BC3sXjtVCitLo%3 PID: 23441911
    • Tian S Pu Luo Zhao L Xu L Li W Luo Y (2013) Isolation and characterization of new p-Terphenyls with antifunga antibacteria and antioxidant activities from halophilic actinomycete Nocardiopsis gilva YIM 90087. J Agric Food Chem 61:3006–3012
    • (2013) J Agric Food Chem , vol.61 , pp. 3006-3012
    • Tian, S.Z.1    Pu, X.2    Luo, G.3    Zhao, L.X.4    Xu, L.H.5    Li, W.J.6    Luo, Y.7
  • 46
    • 84896400967 scopus 로고    scopus 로고
    • Antimicrobial metabolites from a novel halophilic actinomycete Nocardiopsis terrae YIM 90022
    • COI: 1:CAS:528:DC%2BC3sXhsl2gsr3 PID: 24236566
    • Tian Yang Liu Xiong Xu Zhao L (2014) Antimicrobial metabolites from a novel halophilic actinomycete Nocardiopsis terrae YIM 90022. Nat Prod Res 28:344–346
    • (2014) Nat Prod Res , vol.28 , pp. 344-346
    • Tian, S.1    Yang, Y.2    Liu, K.3    Xiong, Z.4    Xu, L.5    Zhao, L.6
  • 47
    • 0000198270 scopus 로고
    • Classificatio identificatio and descriptions of genera and species
    • Williams & Wilkin Baltimore
    • Waksman SA (1961) Classificatio identificatio and descriptions of genera and species. The actinomycete vol 2. Williams & Wilkin Baltimor pp 331–332
    • (1961) The actinomycetes , pp. 331-332
    • Waksman, S.A.1
  • 48
    • 0026018630 scopus 로고
    • Actinopolyspora mortivallis sp. nov a moderately halophilic actinomycete
    • COI: 1:CAS:528:DyaK3MXktVCrsLg%3D
    • Yoshida Matsubara Kudo Horikoshi K (1991) Actinopolyspora mortivallis sp. nov a moderately halophilic actinomycete. Int J Syst Bacteriol 41:15–20
    • (1991) Int J Syst Bacteriol , vol.41 , pp. 15-20
    • Yoshida, M.1    Matsubara, K.2    Kudo, T.3    Horikoshi, K.4
  • 50
    • 67651165968 scopus 로고    scopus 로고
    • An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteri with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa
    • COI: 1:CAS:528:DC%2BD1MXksVKjsrc%3 PID: 19244447
    • Zhi X Li W Stackebrandt E (2009) An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteri with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa. Int J Syst Evol Microbiol 59:589–608
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 589-608
    • Zhi, X.Y.1    Li, W.J.2    Stackebrandt, E.3


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