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Volumn 9, Issue 1, 2016, Pages

Overcoming substrate limitations for improved production of ethylene in E. coli

Author keywords

Arginine; E. coli; Ethylene; Ethylene forming enzyme; ketoglutarate

Indexed keywords

AMINO ACIDS; ARGININE; CARBON DIOXIDE; CHEMICAL INDUSTRY; CRACKING (CHEMICAL); CRACKS; ENZYMES; ESCHERICHIA COLI; ETHYLENE; INDUSTRIAL CHEMICALS; METABOLISM; PHYSIOLOGY; PLANTS (BOTANY); PRODUCTIVITY; STEAM CRACKING; TRANSCRIPTION;

EID: 84954190659     PISSN: 17546834     EISSN: None     Source Type: Journal    
DOI: 10.1186/s13068-015-0413-x     Document Type: Article
Times cited : (22)

References (34)
  • 1
    • 84900648531 scopus 로고    scopus 로고
    • Consulting SRI SRI International Englewood, Colorado
    • Consulting SRI. CEH marketing research report: ethylene. Englewood, Colorado: SRI International; 2011.
    • (2011) CEH Marketing Research Report: Ethylene
  • 3
    • 0032412475 scopus 로고    scopus 로고
    • The ethylene gas signal transduction pathway: A molecular perspective
    • 1:CAS:528:DyaK1MXjvFWlsw%3D%3D
    • Johnson P, Ecker J. The ethylene gas signal transduction pathway: a molecular perspective. Annu Rev Genet. 1998;32:227-54.
    • (1998) Annu Rev Genet , vol.32 , pp. 227-254
    • Johnson, P.1    Ecker, J.2
  • 4
    • 0036274678 scopus 로고    scopus 로고
    • Ethylene biosynthesis and signaling networks
    • 1:CAS:528:DC%2BD38XksV2hurs%3D
    • Wang K, Li H, Ecker J. Ethylene biosynthesis and signaling networks. Plant Cell. 2002;14(Suppl):S131-51.
    • (2002) Plant Cell , vol.14 , pp. S131-S151
    • Wang, K.1    Li, H.2    Ecker, J.3
  • 5
    • 0010609614 scopus 로고
    • Effect of emanations from several species of fungi on respiration and color development of citrus fruits
    • 1:STN:280:DC%2BC3cvptF2luw%3D%3D
    • Biale J. Effect of emanations from several species of fungi on respiration and color development of citrus fruits. Science. 1940;91:458-9.
    • (1940) Science , vol.91 , pp. 458-459
    • Biale, J.1
  • 6
    • 0342472774 scopus 로고
    • Production of epinasty by emanations from normal and decaying citrus fruits and from Penicillium digitatum
    • Winston J, Miller E, Fisher D. Production of epinasty by emanations from normal and decaying citrus fruits and from Penicillium digitatum. J Agric Res. 1940;60:269-77.
    • (1940) J Agric Res , vol.60 , pp. 269-277
    • Winston, J.1    Miller, E.2    Fisher, D.3
  • 7
    • 84900635081 scopus 로고
    • Identification of ethylene as a volatile product of the fungus Penicillium digitatum
    • 1:CAS:528:DyaG3MXltleisg%3D%3D
    • Young R, Pratt H, Biale J. Identification of ethylene as a volatile product of the fungus Penicillium digitatum. Plant Physiol. 1951;26:304-10.
    • (1951) Plant Physiol , vol.26 , pp. 304-310
    • Young, R.1    Pratt, H.2    Biale, J.3
  • 8
    • 0026485632 scopus 로고
    • Molecular cloning in Escherichia coli, expression, and nucleotide sequence of the gene for the ethylene-forming enzyme of Pseudomonas syringae Pv phaseolicola Pk2
    • 1:CAS:528:DyaK3sXks1Cns7g%3D
    • Fukuda H, Ogawa T, Ishihara K, Fujii T, Nagahama K, Omata T, et al. Molecular cloning in Escherichia coli, expression, and nucleotide sequence of the gene for the ethylene-forming enzyme of Pseudomonas syringae Pv phaseolicola Pk2. Biochem Biophys Res Commun. 1992;188:826-32.
    • (1992) Biochem Biophys Res Commun , vol.188 , pp. 826-832
    • Fukuda, H.1    Ogawa, T.2    Ishihara, K.3    Fujii, T.4    Nagahama, K.5    Omata, T.6
  • 9
    • 0028918034 scopus 로고
    • Overexpression and in vitro reconstitution of the ethylene-forming enzyme from Pseudomonas syringae
    • 1:CAS:528:DyaK2MXlsVegtLg%3D
    • Ishihara K, Matsuoka M, Inoue Y, Tanase S, Ogawa T, Fukuda H. Overexpression and in vitro reconstitution of the ethylene-forming enzyme from Pseudomonas syringae. J Ferment Bioeng. 1995;79:205-11.
    • (1995) J Ferment Bioeng , vol.79 , pp. 205-211
    • Ishihara, K.1    Matsuoka, M.2    Inoue, Y.3    Tanase, S.4    Ogawa, T.5    Fukuda, H.6
  • 10
    • 84900622044 scopus 로고
    • The biogenesis of ethylene in Penicillium digitatum
    • Jacobsen D, Wang C. The biogenesis of ethylene in Penicillium digitatum. Plant Physiol. 1959;1968:43.
    • (1959) Plant Physiol , vol.1968 , pp. 43
    • Jacobsen, D.1    Wang, C.2
  • 11
    • 0025949524 scopus 로고
    • Purification and properties of an ethylene-forming enzyme from Pseudomonas syringae Pv phaseolicola Pk2
    • 1:CAS:528:DyaK38Xjs1KktQ%3D%3D
    • Nagahama K, Ogawa T, Fujii T, Tazaki M, Tanase S, Morino Y, et al. Purification and properties of an ethylene-forming enzyme from Pseudomonas syringae Pv phaseolicola Pk2. J Gen Microbiol. 1991;137:2281-6.
    • (1991) J Gen Microbiol , vol.137 , pp. 2281-2286
    • Nagahama, K.1    Ogawa, T.2    Fujii, T.3    Tazaki, M.4    Tanase, S.5    Morino, Y.6
  • 12
    • 0026474995 scopus 로고
    • Two reactions are simultaneously catalyzed by a single enzyme: The arginine-dependent simultaneous formation of two products, ethylene and succinate, from 2-oxoglutarate by an enzyme from Pseudomonas syringae
    • Fukuda H, Ogawa T, Tazaki M, Nagahama K, Fujiil T, Tanase S, et al. Two reactions are simultaneously catalyzed by a single enzyme: the arginine-dependent simultaneous formation of two products, ethylene and succinate, from 2-oxoglutarate by an enzyme from Pseudomonas syringae. Biochem Biophys Res Commun. 1992;188(2):483-9. doi: 10.1016/0006-291X(92)91081-Z.
    • (1992) Biochem Biophys Res Commun , vol.188 , Issue.2 , pp. 483-489
    • Fukuda, H.1    Ogawa, T.2    Tazaki, M.3    Nagahama, K.4    Fujiil, T.5    Tanase, S.6
  • 14
    • 0027980155 scopus 로고
    • Heterologous expression of the gene for the ethylene-forming enzyme from Pseudomonas syringae in the cyanobacterium Synechococcus
    • 1:CAS:528:DyaK2cXhvVChs7c%3D
    • Fukuda H, Sakai M, Nagahama K, Fujii T, Matsuoka M, Inoue Y, et al. Heterologous expression of the gene for the ethylene-forming enzyme from Pseudomonas syringae in the cyanobacterium Synechococcus. Biotechnol Lett. 1994;16:1-6.
    • (1994) Biotechnol Lett , vol.16 , pp. 1-6
    • Fukuda, H.1    Sakai, M.2    Nagahama, K.3    Fujii, T.4    Matsuoka, M.5    Inoue, Y.6
  • 15
    • 84869812481 scopus 로고    scopus 로고
    • Ethylene synthesis and regulated expression of recombinant protein in Synechocystis sp PCC 6803
    • 1:CAS:528:DC%2BC38XhvVaqt7fF
    • Guerrero F, Carbonell V, Cossu M, Correddu D, Jones P. Ethylene synthesis and regulated expression of recombinant protein in Synechocystis sp PCC 6803. PLoS ONE. 2012;7:e50470.
    • (2012) PLoS ONE , vol.7 , pp. e50470
    • Guerrero, F.1    Carbonell, V.2    Cossu, M.3    Correddu, D.4    Jones, P.5
  • 16
    • 50249084559 scopus 로고    scopus 로고
    • Ethylene production by metabolic engineering of the yeast Saccharomyces cerevisiae
    • 1:CAS:528:DC%2BD1cXhtVKjtb3J
    • Pirkov I, Albers E, Norbeck J, Larsson C. Ethylene production by metabolic engineering of the yeast Saccharomyces cerevisiae. Metab Eng. 2008;10:276-80.
    • (2008) Metab Eng , vol.10 , pp. 276-280
    • Pirkov, I.1    Albers, E.2    Norbeck, J.3    Larsson, C.4
  • 17
    • 0031284263 scopus 로고    scopus 로고
    • Photosynthetic conversion of carbon dioxide to ethylene by the recombinant cyanobacterium, Synechococcus sp. PCC 7942, which harbors a gene for the ethylene-forming enzyme of Pseudomonas syringae
    • 1:CAS:528:DyaK2sXnvFCnu7k%3D
    • Sakai M, Ogawa T, Matsuoka M, Fukuda H. Photosynthetic conversion of carbon dioxide to ethylene by the recombinant cyanobacterium, Synechococcus sp. PCC 7942, which harbors a gene for the ethylene-forming enzyme of Pseudomonas syringae. J Ferment Bioeng. 1997;84:434-43.
    • (1997) J Ferment Bioeng , vol.84 , pp. 434-443
    • Sakai, M.1    Ogawa, T.2    Matsuoka, M.3    Fukuda, H.4
  • 18
    • 0037265743 scopus 로고    scopus 로고
    • Construction and analysis of a recombinant cyanobacterium expressing a chromosomally inserted gene for an ethylene-forming enzyme at the psbAI locus
    • 1:CAS:528:DC%2BD3sXks1Kgsbc%3D
    • Takahama K, Matsuoka M, Nagahama K, Ogawa T. Construction and analysis of a recombinant cyanobacterium expressing a chromosomally inserted gene for an ethylene-forming enzyme at the psbAI locus. J Biosci Bioeng. 2003;95:302-5.
    • (2003) J Biosci Bioeng , vol.95 , pp. 302-305
    • Takahama, K.1    Matsuoka, M.2    Nagahama, K.3    Ogawa, T.4
  • 19
    • 84869757991 scopus 로고    scopus 로고
    • Sustained photosynthetic conversion of CO2 to ethylene in recombinant cyanobacterium Synechocystis 6803
    • 1:CAS:528:DC%2BC38Xhtlyqs7jJ
    • Ungerer J, Tao L, Davis M, Ghirardi M, Maness P, Yu J. Sustained photosynthetic conversion of CO2 to ethylene in recombinant cyanobacterium Synechocystis 6803. Energ Environ Sci. 2012;5:8998-9006.
    • (2012) Energ Environ Sci , vol.5 , pp. 8998-9006
    • Ungerer, J.1    Tao, L.2    Davis, M.3    Ghirardi, M.4    Maness, P.5    Yu, J.6
  • 20
    • 0030940137 scopus 로고    scopus 로고
    • The chloroplast psbA promoter is more efficient in Escherichia coli than the T7 promoter for hyperexpression of a foreign protein
    • 1:CAS:528:DyaK2sXislWnt7Y%3D
    • Brixey P, Guda C, Daniell H. The chloroplast psbA promoter is more efficient in Escherichia coli than the T7 promoter for hyperexpression of a foreign protein. Biotechnol Lett. 1997;19:395-9.
    • (1997) Biotechnol Lett , vol.19 , pp. 395-399
    • Brixey, P.1    Guda, C.2    Daniell, H.3
  • 21
    • 84883555849 scopus 로고    scopus 로고
    • Quantitative monitoring of 2-oxoglutarate in Escherichia coli cells by a fluorescence resonance energy transfer-based biosensor
    • 1:CAS:528:DC%2BC3sXhtFyjtL%2FL
    • Zhang C, Wei Z, Ye B. Quantitative monitoring of 2-oxoglutarate in Escherichia coli cells by a fluorescence resonance energy transfer-based biosensor. Appl Microbiol Biotechnol. 2013;97:8307-16.
    • (2013) Appl Microbiol Biotechnol , vol.97 , pp. 8307-8316
    • Zhang, C.1    Wei, Z.2    Ye, B.3
  • 23
    • 80053061381 scopus 로고    scopus 로고
    • Flux balance analysis for ethylene formation in genetically engineered Saccharomyces cerevisiae
    • 1:STN:280:DC%2BC3Mjks1Cjug%3D%3D
    • Larsson C, Snoep J, Norbeck J, Albers E. Flux balance analysis for ethylene formation in genetically engineered Saccharomyces cerevisiae. IET Syst Biol. 2011;5:245-51.
    • (2011) IET Syst Biol , vol.5 , pp. 245-251
    • Larsson, C.1    Snoep, J.2    Norbeck, J.3    Albers, E.4
  • 24
    • 68049100110 scopus 로고    scopus 로고
    • Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli
    • Bennett BD, Kimball EH, Gao M, Osterhout R, Van Dien SJ, Rabinowitz JD. Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli. Nat Chem Biol. 2009;5(8):593-9. http://www.nature.com/nchembio/journal/v5/n8/suppinfo/nchembio.186-S1.html
    • (2009) Nat Chem Biol. , vol.5 , Issue.8 , pp. 593-599
    • Bennett, B.D.1    Kimball, E.H.2    Gao, M.3    Osterhout, R.4    Van Dien, S.J.5    Rabinowitz, J.D.6
  • 25
    • 44449126770 scopus 로고    scopus 로고
    • Arginine Biosynthesis in Escherichia coli: Experimental perturbation and mathematical modeling
    • Caldara M, Dupont G, Leroy F, Goldbeter A, De Vuyst L, Cunin R. Arginine Biosynthesis in Escherichia coli: experimental perturbation and mathematical modeling. J Biol Chem. 2008;283(10):6347-58. doi: 10.1074/jbc.M705884200.
    • (2008) J Biol Chem , vol.283 , Issue.10 , pp. 6347-6358
    • Caldara, M.1    Dupont, G.2    Leroy, F.3    Goldbeter, A.4    De Vuyst, L.5    Cunin, R.6
  • 26
    • 33745282141 scopus 로고    scopus 로고
    • Effect of sucA or sucC gene knockout on the metabolism in Escherichia coli based on gene expressions, enzyme activities, intracellular metabolite concentrations and metabolic fluxes by 13C-labeling experiments
    • Li M, Ho PY, Yao S, Shimizu K. Effect of sucA or sucC gene knockout on the metabolism in Escherichia coli based on gene expressions, enzyme activities, intracellular metabolite concentrations and metabolic fluxes by 13C-labeling experiments. Biochem Eng J. 2006;30(3):286-96. doi: 10.1016/j.bej.2006.05.011.
    • (2006) Biochem Eng J , vol.30 , Issue.3 , pp. 286-296
    • Li, M.1    Ho, P.Y.2    Yao, S.3    Shimizu, K.4
  • 27
    • 0030463296 scopus 로고    scopus 로고
    • Flux analysis and control of the central metabolic pathways in Escherichia coli
    • 1:CAS:528:DyaK2sXmvVyjtA%3D%3D
    • Holms H. Flux analysis and control of the central metabolic pathways in Escherichia coli. FEMS Microbiol Rev. 1996;19(2):85-116.
    • (1996) FEMS Microbiol Rev , vol.19 , Issue.2 , pp. 85-116
    • Holms, H.1
  • 28
    • 85035374082 scopus 로고    scopus 로고
    • Concepts, Challenges and Successes in Modeling Thermodynamics of Metabolism
    • Cannon WR. Concepts, Challenges and Successes in Modeling Thermodynamics of Metabolism. Front Bioeng Biotechnol. 2014;2:53. doi: 10.3389/fbioe.2014.00053.
    • (2014) Front Bioeng Biotechnol , vol.2 , pp. 53
    • Cannon, W.R.1
  • 29
    • 77249124977 scopus 로고    scopus 로고
    • Metabolic regulation of Escherichia coli and its gdhA, glnL, gltB, D mutants under different carbon and nitrogen limitations in the continuous culture
    • Kumar R, Shimizu K. Metabolic regulation of Escherichia coli and its gdhA, glnL, gltB, D mutants under different carbon and nitrogen limitations in the continuous culture. Microb Cell Fact. 2010;9(1):8.
    • (2010) Microb Cell Fact , vol.9 , Issue.1 , pp. 8
    • Kumar, R.1    Shimizu, K.2
  • 30
    • 33846928720 scopus 로고    scopus 로고
    • Integration of regulatory signals through involvement of multiple global regulators: Control of the Escherichia coli gltBDF operon by Lrp, IHF, Crp, and ArgR
    • Paul L, Mishra P, Blumenthal R, Matthews R. Integration of regulatory signals through involvement of multiple global regulators: control of the Escherichia coli gltBDF operon by Lrp, IHF, Crp, and ArgR. BMC Microbiol. 2007;7(1):2.
    • (2007) BMC Microbiol , vol.7 , Issue.1 , pp. 2
    • Paul, L.1    Mishra, P.2    Blumenthal, R.3    Matthews, R.4
  • 31
    • 0014020584 scopus 로고
    • Regulation of citrate synthase activity in Escherichia coli
    • 1:CAS:528:DyaF2sXosVKj
    • Weitzman PDJ. Regulation of citrate synthase activity in Escherichia coli. Biochim Biophys Acta. 1966;128:213-5.
    • (1966) Biochim Biophys Acta , vol.128 , pp. 213-215
    • Weitzman, P.D.J.1
  • 32
    • 77955459156 scopus 로고    scopus 로고
    • Rapid profiling of a microbial genome using mixtures of barcoded oligonucleotides
    • Warner JR, Reeder PJ, Karimpour-Fard A, Woodruff LBA, Gill RT. Rapid profiling of a microbial genome using mixtures of barcoded oligonucleotides. Nat Biotech. 2010;28(8):856-62. http://www.nature.com/nbt/journal/v28/n8/abs/nbt.1653.html#supplementary-information
    • (2010) Nat Biotech , vol.28 , Issue.8 , pp. 856-862
    • Warner, J.R.1    Reeder, P.J.2    Karimpour-Fard, A.3    Woodruff, L.B.A.4    Gill, R.T.5
  • 33
    • 68949161807 scopus 로고    scopus 로고
    • Programming cells by multiplex genome engineering and accelerated evolution
    • Wang HH, Isaacs FJ, Carr PA, Sun ZZ, Xu G, Forest CR et al. Programming cells by multiplex genome engineering and accelerated evolution. Nature. 2009;460(7257):894-8. http://www.nature.com/nature/journal/v460/n7257/suppinfo/nature08187-S1.html
    • (2009) Nature , vol.460 , Issue.7257 , pp. 894-898
    • Wang, H.H.1    Isaacs, F.J.2    Carr, P.A.3    Sun, Z.Z.4    Xu, G.5    Forest, C.R.6
  • 34
    • 0026766423 scopus 로고
    • Isolation and molecular characterization of a novel broad-host-range plasmid from Bordetella bronchiseptica with sequence similarities to plasmids from gram-positive organisms
    • Antoine R, Locht C. Isolation and molecular characterization of a novel broad-host-range plasmid from Bordetella bronchiseptica with sequence similarities to plasmids from gram-positive organisms. Mol Microbiol. 1992;6(13):1785-99. doi: 10.1111/j.1365-2958.1992.tb01351.x.
    • (1992) Mol Microbiol , vol.6 , Issue.13 , pp. 1785-1799
    • Antoine, R.1    Locht, C.2


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