-
1
-
-
0242386460
-
Identifying global regulators in transcriptional regulatory networks in bacteria
-
14572541. 10.1016/j.mib.2003.09.002
-
Identifying global regulators in transcriptional regulatory networks in bacteria. A Martinez-Antonio J Collado-Vides, Curr Opin Microbiol 2003 6 5 482 489 14572541 10.1016/j.mib.2003.09.002
-
(2003)
Curr Opin Microbiol
, vol.6
, Issue.5
, pp. 482-489
-
-
Martinez-Antonio, A.1
Collado-Vides, J.2
-
2
-
-
0242276682
-
Nitrogen assimilation and global regulation in Escherichia coli
-
12730324. 10.1146/annurev.micro.57.030502.090820
-
Nitrogen assimilation and global regulation in Escherichia coli. L Reitzer, Annu Rev Microbiol 2003 57 155 176 12730324 10.1146/annurev.micro.57. 030502.090820
-
(2003)
Annu Rev Microbiol
, vol.57
, pp. 155-176
-
-
Reitzer, L.1
-
3
-
-
0031752273
-
Pathway choice in glutamate synthesis in Escherichia coli
-
9721297
-
Pathway choice in glutamate synthesis in Escherichia coli. RB Helling, J Bacteriol 1998 180 17 4571 4575 9721297
-
(1998)
J Bacteriol
, vol.180
, Issue.17
, pp. 4571-4575
-
-
Helling, R.B.1
-
4
-
-
0028129875
-
Why does Escherichia coli have two primary pathways for synthesis of glutamate?
-
7913929
-
Why does Escherichia coli have two primary pathways for synthesis of glutamate? RB Helling, J Bacteriol 1994 176 15 4664 4668 7913929
-
(1994)
J Bacteriol
, vol.176
, Issue.15
, pp. 4664-4668
-
-
Helling, R.B.1
-
5
-
-
0026505534
-
Characterization of the regulon controlled by the leucine responsive regulatory protein
-
1346534
-
Characterization of the regulon controlled by the leucine responsive regulatory protein. BR Ernsting Atkinson, M. R., Ninfa, A. J. and Matthews, R. G., J Bacteriol 1992 174 4 1109 1118 1346534
-
(1992)
J Bacteriol
, vol.174
, Issue.4
, pp. 1109-1118
-
-
Ernsting Atkinson, M.R.1
Ninfa, A.J.2
Matthews, R.G.3
-
6
-
-
0037109068
-
Adapation to famine: A family of stationary-phase genes revealed by microarray analysis
-
12374860. 10.1073/pnas.212510999
-
Adapation to famine: a family of stationary-phase genes revealed by microarray analysis. TH Tani A. Khodursky, R. M. Blumenthal, P. O. Brown and R. G. Matthews, Proc Nat Acad Sci USA 2002 99 13471 13476 12374860 10.1073/pnas.212510999
-
(2002)
Proc Nat Acad Sci USA
, vol.99
, pp. 13471-13476
-
-
Khodursky, A.H.T.T.1
Blumenthal, R.M.2
Brown, P.O.3
Matthews, R.G.4
-
7
-
-
0028111825
-
The leucine-responsive regulatory protein, a global regulator of metabolism in Escherichia coli
-
7968922
-
The leucine-responsive regulatory protein, a global regulator of metabolism in Escherichia coli. JM Calvo RG Matthews, Microbiol Rev 1994 58 3 466 490 7968922
-
(1994)
Microbiol Rev
, vol.58
, Issue.3
, pp. 466-490
-
-
Calvo, J.M.1
Matthews, R.G.2
-
8
-
-
0033912882
-
Prolonged stationary-phase incubation selects for lrp mutations in Escherichia coli K-12
-
10894750. 10.1128/JB.182.15.4361-4365.2000
-
Prolonged stationary-phase incubation selects for lrp mutations in Escherichia coli K-12. ER Zinser R Kolter, J Bacteriol 2000 182 15 4361 4365 10894750 10.1128/JB.182.15.4361-4365.2000
-
(2000)
J Bacteriol
, vol.182
, Issue.15
, pp. 4361-4365
-
-
Zinser, E.R.1
Kolter, R.2
-
9
-
-
0034660619
-
Sigma factor selectivity of Escherichia coli RNA polymerase: Role for CRP, IHF and Lrp transcription factors
-
10856246. 10.1093/emboj/19.12.3028
-
Sigma factor selectivity of Escherichia coli RNA polymerase: role for CRP, IHF and Lrp transcription factors. F Colland M Barth R Hengge-Aronis A Kolb, EMBO J 2000 19 12 3028 3037 10856246 10.1093/emboj/19.12.3028
-
(2000)
EMBO J
, vol.19
, Issue.12
, pp. 3028-3037
-
-
Colland, F.1
Barth, M.2
Hengge-Aronis, R.3
Kolb, A.4
-
10
-
-
0032716841
-
Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
-
10515926
-
Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid. T Ali Azam A Iwata A Nishimura S Ueda A Ishihama, J Bacteriol 1999 181 20 6361 6370 10515926
-
(1999)
J Bacteriol
, vol.181
, Issue.20
, pp. 6361-6370
-
-
Ali Azam, T.1
Iwata, A.2
Nishimura, A.3
Ueda, S.4
Ishihama, A.5
-
11
-
-
0031863419
-
Interplay between global regulators of Escherichia coli: Effect of RpoS, Lrp and H-NS on transcription of the gene osmC
-
9663683. 10.1046/j.1365-2958.1998.00855.x
-
Interplay between global regulators of Escherichia coli: effect of RpoS, Lrp and H-NS on transcription of the gene osmC. J Bouvier S Gordia G Kampmann R Lange R Hengge-Aronis C Gutierrez, Mol Microbiol 1998 28 5 971 980 9663683 10.1046/j.1365-2958.1998.00855.x
-
(1998)
Mol Microbiol
, vol.28
, Issue.5
, pp. 971-980
-
-
Bouvier, J.1
Gordia, S.2
Kampmann, G.3
Lange, R.4
Hengge-Aronis, R.5
Gutierrez, C.6
-
12
-
-
0029887171
-
The leucine-responsive regulatory protein (Lrp) acts as a specific repressor for sigmaS-dependent transcription of the Escherichia coli aidB gene
-
8809748. 10.1111/j.1365-2958.1996.tb02536.x
-
The leucine-responsive regulatory protein (Lrp) acts as a specific repressor for sigmaS-dependent transcription of the Escherichia coli aidB gene. P Landini LI Hajec LH Nguyen RR Burgess MR Volkert, Mol Microbiol 1996 20 5 947 955 8809748 10.1111/j.1365-2958.1996.tb02536.x
-
(1996)
Mol Microbiol
, vol.20
, Issue.5
, pp. 947-955
-
-
Landini, P.1
Hajec, L.I.2
Nguyen, L.H.3
Burgess, R.R.4
Volkert, M.R.5
-
13
-
-
0029942063
-
Hns, RpoS and Lrp mutations affect stationary-phase survival at high osmolarity
-
8763619. 10.1016/0923-2508(96)84708-5
-
Hns, RpoS and Lrp mutations affect stationary-phase survival at high osmolarity. M Levinthal T Pownder, Res Microbiol 1996 147 5 333 342 8763619 10.1016/0923-2508(96)84708-5
-
(1996)
Res Microbiol
, vol.147
, Issue.5
, pp. 333-342
-
-
Levinthal, M.1
Pownder, T.2
-
14
-
-
0034973706
-
Activation from a distance: Roles of Lrp and integration host factor in transcriptional activation of gltBDF
-
11395454. 10.1128/JB.183.13.3910-3918.2001
-
Activation from a distance: Roles of Lrp and integration host factor in transcriptional activation of gltBDF. L Paul R. M. Blumenthal and R. G. Matthews, J Bacteriol 2001 183 13 3910 3918 11395454 10.1128/JB.183.13.3910- 3918.2001
-
(2001)
J Bacteriol
, vol.183
, Issue.13
, pp. 3910-3918
-
-
Blumenthal, M.R.P.L.1
Matthews, R.G.2
-
15
-
-
0015409865
-
Adenosine 3':5'-cyclic monophosphate control of the enzymes of glutamine metabolism in Escherichia coli
-
4404145. 10.1073/pnas.69.10.2922
-
Adenosine 3':5'-cyclic monophosphate control of the enzymes of glutamine metabolism in Escherichia coli. S Prusiner R. E. Miller and R. C. Valentine, Proc Nat Acad Sci USA 1972 69 10 2922 2926 4404145 10.1073/pnas.69.10.2922
-
(1972)
Proc Nat Acad Sci USA
, vol.69
, Issue.10
, pp. 2922-2926
-
-
Miller, E.R.P.S.1
Valentine, R.C.2
-
16
-
-
33646184857
-
A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth
-
16377617. 10.1074/jbc.M512312200
-
A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth. C Constantinidou JL Hobman L Griffiths MD Patel CW Penn JA Cole TW Overton, J Biol Chem 2006 281 8 4802 4815 16377617 10.1074/jbc.M512312200
-
(2006)
J Biol Chem
, vol.281
, Issue.8
, pp. 4802-4815
-
-
Constantinidou, C.1
Hobman, J.L.2
Griffiths, L.3
Patel, M.D.4
Penn, C.W.5
Cole, J.A.6
Overton, T.W.7
-
17
-
-
0034687819
-
Nitrogen regulatory protein C-controlled genes of Escherichia coli: Scavenging as a defense against nitrogen limitation
-
11121068. 10.1073/pnas.97.26.14674
-
Nitrogen regulatory protein C-controlled genes of Escherichia coli: scavenging as a defense against nitrogen limitation. DP Zimmer E Soupene HL Lee VF Wendisch AB Khodursky BJ Peter RA Bender S Kustu, Proc Natl Acad Sci U S A 2000 97 26 14674 14679 11121068 10.1073/pnas.97.26.14674
-
(2000)
Proc Natl Acad Sci U S a
, vol.97
, Issue.26
, pp. 14674-14679
-
-
Zimmer, D.P.1
Soupene, E.2
Lee, H.L.3
Wendisch, V.F.4
Khodursky, A.B.5
Peter, B.J.6
Bender, R.A.7
Kustu, S.8
-
18
-
-
1642514566
-
GadE (YhiE): A novel activator involved in the response to acid environment in Escherichia coli
-
14702398. 10.1099/mic.0.26659-0
-
GadE (YhiE): a novel activator involved in the response to acid environment in Escherichia coli. F Hommais E Krin JY Coppee C Lacroix E Yeramian A Danchin P Bertin, Microbiology 2004 150 Pt 1 61 72 14702398 10.1099/mic.0.26659-0
-
(2004)
Microbiology
, vol.150
, Issue.PART 1
, pp. 61-72
-
-
Hommais, F.1
Krin, E.2
Coppee, J.Y.3
Lacroix, C.4
Yeramian, E.5
Danchin, A.6
Bertin, P.7
-
19
-
-
13444262374
-
EcoCyc: A comprehensive database resource for Escherichia coli
-
15608210. 10.1093/nar/gki108
-
EcoCyc: a comprehensive database resource for Escherichia coli. IM Keseler J Collado-Vides S Gama-Castro J Ingraham S Paley IT Paulsen M Peralta-Gil PD Karp, Nucleic Acids Res 2005 33 Database issue D334 7 15608210 10.1093/nar/gki108
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.DATABASE ISSUE
, pp. 334-7
-
-
Keseler, I.M.1
Collado-Vides, J.2
Gama-Castro, S.3
Ingraham, J.4
Paley, S.5
Paulsen, I.T.6
Peralta-Gil, M.7
Karp, P.D.8
-
20
-
-
0023709904
-
Cyclic AMP and cell division in Escherichia coli
-
2826407
-
Cyclic AMP and cell division in Escherichia coli. R D'Ari A Jaffe P Bouloc A Robin, J Bacteriol 1988 170 1 65 70 2826407
-
(1988)
J Bacteriol
, vol.170
, Issue.1
, pp. 65-70
-
-
D'Ari, R.1
Jaffe, A.2
Bouloc, P.3
Robin, A.4
-
21
-
-
0034687672
-
Global regulation of gene expression
-
11121014. 10.1073/pnas.97.26.14044
-
Global regulation of gene expression. B Magasanik, Proc Natl Acad Sci U S A 2000 97 26 14044 14045 11121014 10.1073/pnas.97.26.14044
-
(2000)
Proc Natl Acad Sci U S a
, vol.97
, Issue.26
, pp. 14044-14045
-
-
Magasanik, B.1
-
22
-
-
0030905517
-
Catabolite repression by glucose 6-phosphate, gluconate and lactose in Escherichia coli
-
9194712. 10.1046/j.1365-2958.1997.3991761.x
-
Catabolite repression by glucose 6-phosphate, gluconate and lactose in Escherichia coli. BM Hogema JC Arents T Inada H Aiba K van Dam PW Postma, Mol Microbiol 1997 24 4 857 867 9194712 10.1046/j.1365-2958.1997.3991761.x
-
(1997)
Mol Microbiol
, vol.24
, Issue.4
, pp. 857-867
-
-
Hogema, B.M.1
Arents, J.C.2
Inada, T.3
Aiba, H.4
Van Dam, K.5
Postma, P.W.6
-
23
-
-
0037995648
-
Determinants of DNA bending in the DNA-cyclic AMP receptor protein complexes in Escherichia coli
-
12718521. 10.1021/bi027259+
-
Determinants of DNA bending in the DNA-cyclic AMP receptor protein complexes in Escherichia coli. SH Lin JC Lee, Biochemistry 2003 42 17 4809 4818 12718521 10.1021/bi027259+
-
(2003)
Biochemistry
, vol.42
, Issue.17
, pp. 4809-4818
-
-
Lin, S.H.1
Lee, J.C.2
-
24
-
-
0026742139
-
The arginine regulon of Escherichia coli K12: A study of repressor-operator interactions and of in vitro binding affinities versus in vivo repression
-
1640456. 10.1016/0022-2836(92)90953
-
The arginine regulon of Escherichia coli K12: A study of repressor-operator interactions and of in vitro binding affinities versus in vivo repression. D Charlier M. Roovers, F. van Vilet, A. Boyen, R. Cunin, Y. Nakamura, N. Glansdorff and A. Pierard, J Mol Biol 1992 226 367 386 1640456 10.1016/0022-2836(92)90953-H
-
(1992)
J Mol Biol
, vol.226
, pp. 367-386
-
-
Roovers, M.C.D.1
Van Vilet, F.2
Boyen, A.3
Cunin, R.4
Nakamura, Y.5
Glansdorff, N.6
Pierard, A.7
-
25
-
-
0026654183
-
Binding of the arginine repressor of Escherichia coli K12 to its operator sites
-
1640457. 10.1016/0022-2836(92)90954
-
Binding of the arginine repressor of Escherichia coli K12 to its operator sites. G Tian D. Lim, J. Carey, and W. K. Maas, J Mol Biol 1992 226 387 397 1640457 10.1016/0022-2836(92)90954-I
-
(1992)
J Mol Biol
, vol.226-231
, pp. 387-397
-
-
Lim, D.T.G.1
Carey, J.2
Maas, W.K.3
-
26
-
-
0030851327
-
A nucleoprotein activation complex between the leucine-responsive regulatory protein and DNA upstream of the gltBDF operon in Escherichia coli
-
9236118. 10.1006/jmbi.1997.1057
-
A nucleoprotein activation complex between the leucine-responsive regulatory protein and DNA upstream of the gltBDF operon in Escherichia coli. DE Wiese 2nd BR Ernsting RM Blumenthal RG Matthews, J Mol Biol 1997 270 2 152 168 9236118 10.1006/jmbi.1997.1057
-
(1997)
J Mol Biol
, vol.270
, Issue.2
, pp. 152-168
-
-
Wiese II, D.E.1
Ernsting, B.R.2
Blumenthal, R.M.3
Matthews, R.G.4
-
27
-
-
0030768931
-
The Hill equation revisited: Uses and misuses
-
9285481
-
The Hill equation revisited: uses and misuses. JN Weiss, FASEB J 1997 11 11 835 841 9285481
-
(1997)
FASEB J
, vol.11
, Issue.11
, pp. 835-841
-
-
Weiss, J.N.1
-
28
-
-
0027369102
-
Regulation of gltBDF operon of Escherichia coli: How a leucine-insensitive operon is regulated by leucine-responsive regulatory protein
-
7901196
-
Regulation of gltBDF operon of Escherichia coli: How a leucine-insensitive operon is regulated by leucine-responsive regulatory protein. BR Ernsting J. W. Denninger, R. M. Blumenthal and R. G. Matthews, J Bacteriol 1993 175 7160 7169 7901196
-
(1993)
J Bacteriol
, vol.175
, pp. 7160-7169
-
-
Denninger, J.W.1
Blumenthal, R.M.2
Matthews, R.G.3
-
29
-
-
0027251266
-
The Esherichica coli K-12 "wild types" W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels
-
8501045
-
The Esherichica coli K-12 "wild types" W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels. KF Jensen, J Bacteriol 1993 175 3401 3407 8501045
-
(1993)
J Bacteriol
, vol.175
, pp. 3401-3407
-
-
Jensen, K.F.1
-
30
-
-
1342324028
-
IHF and HU: Flexible architects of bent DNA
-
15102446. 10.1016/j.sbi.2003.12.003
-
IHF and HU: flexible architects of bent DNA. KK Swinger PA Rice, Curr Opin Struct Biol 2004 14 1 28 35 15102446 10.1016/j.sbi.2003.12.003
-
(2004)
Curr Opin Struct Biol
, vol.14
, Issue.1
, pp. 28-35
-
-
Swinger, K.K.1
Rice, P.A.2
-
31
-
-
0029833895
-
Effects of integration host factor and DNA supercoiling on transcription from the ilvPG promoter of Escherichia coli
-
8702758. 10.1074/jbc.271.34.20258
-
Effects of integration host factor and DNA supercoiling on transcription from the ilvPG promoter of Escherichia coli. BS Parekh SD Sheridan GW Hatfield, J Biol Chem 1996 271 34 20258 20264 8702758 10.1074/jbc.271.34.20258
-
(1996)
J Biol Chem
, vol.271
, Issue.34
, pp. 20258-20264
-
-
Parekh, B.S.1
Sheridan, S.D.2
Hatfield, G.W.3
-
32
-
-
0031595527
-
Participation of IHF and a distant UP element in the stimulation of the phage lambda PL promoter
-
9791187. 10.1046/j.1365-2958.1998.01079.x
-
Participation of IHF and a distant UP element in the stimulation of the phage lambda PL promoter. H Giladi S Koby G Prag M Engelhorn J Geiselmann AB Oppenheim, Mol Microbiol 1998 30 2 443 451 9791187 10.1046/j.1365-2958.1998. 01079.x
-
(1998)
Mol Microbiol
, vol.30
, Issue.2
, pp. 443-451
-
-
Giladi, H.1
Koby, S.2
Prag, G.3
Engelhorn, M.4
Geiselmann, J.5
Oppenheim, A.B.6
-
33
-
-
2442655332
-
Transcriptome analysis of Crp-dependent catabolite control of gene expression in Escherichia coli
-
15150239. 10.1128/JB.186.11.3516-3524.2004
-
Transcriptome analysis of Crp-dependent catabolite control of gene expression in Escherichia coli. G Gosset Z Zhang S Nayyar WA Cuevas MH Saier Jr., J Bacteriol 2004 186 11 3516 3524 15150239 10.1128/JB.186.11.3516-3524.2004
-
(2004)
J Bacteriol
, vol.186
, Issue.11
, pp. 3516-3524
-
-
Gosset, G.1
Zhang, Z.2
Nayyar, S.3
Cuevas, W.A.4
Saier Jr., M.H.5
-
34
-
-
0035724135
-
The CRP-cAMP complex and downregulation of the glnAp2 promoter provides a novel regulatory linkage between carbon metabolism and nitrogen assimilation in Escherichia coli
-
11532153. 10.1046/j.1365-2958.2001.02561.x
-
The CRP-cAMP complex and downregulation of the glnAp2 promoter provides a novel regulatory linkage between carbon metabolism and nitrogen assimilation in Escherichia coli. ZX Tian QS Li M Buck A Kolb YP Wang, Mol Microbiol 2001 41 4 911 924 11532153 10.1046/j.1365-2958.2001.02561.x
-
(2001)
Mol Microbiol
, vol.41
, Issue.4
, pp. 911-924
-
-
Tian, Z.X.1
Li, Q.S.2
Buck, M.3
Kolb, A.4
Wang, Y.P.5
-
35
-
-
0036206935
-
Determinants of the C-terminal domain of the Escherichia coli RNA polymerase alpha subunit important for transcription at class I cyclic AMP receptor protein-dependent promoters
-
11914359. 10.1128/JB.184.8.2273-2280.2002
-
Determinants of the C-terminal domain of the Escherichia coli RNA polymerase alpha subunit important for transcription at class I cyclic AMP receptor protein-dependent promoters. NJ Savery GS Lloyd SJ Busby MS Thomas RH Ebright RL Gourse, J Bacteriol 2002 184 8 2273 2280 11914359 10.1128/JB.184.8.2273-2280.2002
-
(2002)
J Bacteriol
, vol.184
, Issue.8
, pp. 2273-2280
-
-
Savery, N.J.1
Lloyd, G.S.2
Busby, S.J.3
Thomas, M.S.4
Ebright, R.H.5
Gourse, R.L.6
-
36
-
-
0033594882
-
An inactive open complex mediated by an UP element at Escherichia coli promoters
-
10377392. 10.1073/pnas.96.13.7202
-
An inactive open complex mediated by an UP element at Escherichia coli promoters. H Tagami H Aiba, Proc Natl Acad Sci USA 1999 96 13 7202 7207 10377392 10.1073/pnas.96.13.7202
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, Issue.13
, pp. 7202-7207
-
-
Tagami, H.1
Aiba, H.2
-
37
-
-
0034685608
-
The bacterial DNA-binding protein H-NS represses ribosomal RNA transcription by trapping RNA polymerase in the initiation complex
-
10801345. 10.1006/jmbi.2000.3708
-
The bacterial DNA-binding protein H-NS represses ribosomal RNA transcription by trapping RNA polymerase in the initiation complex. O Schroder R Wagner, J Mol Biol 2000 298 5 737 748 10801345 10.1006/jmbi.2000.3708
-
(2000)
J Mol Biol
, vol.298
, Issue.5
, pp. 737-748
-
-
Schroder, O.1
Wagner, R.2
-
38
-
-
11144246929
-
LacP1 promoter with an extended -10 motif. Pleiotropic effects of cyclic AMP protein at different steps of transcription initiation
-
15385551. 10.1074/jbc.M408609200
-
lacP1 promoter with an extended -10 motif. Pleiotropic effects of cyclic AMP protein at different steps of transcription initiation. M Liu S Garges S Adhya, J Biol Chem 2004 279 52 54552 54557 15385551 10.1074/jbc.M408609200
-
(2004)
J Biol Chem
, vol.279
, Issue.52
, pp. 54552-54557
-
-
Liu, M.1
Garges, S.2
Adhya, S.3
-
39
-
-
33751534830
-
The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate limiting.
-
17157257. 10.1016/j.molcel.2006.10.030
-
The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate limiting. NB Reppas JT Wade GM Church K Struhl, Molec Cell 2006 24 747 757 17157257 10.1016/j.molcel.2006.10.030
-
(2006)
Molec Cell
, vol.24
, pp. 747-757
-
-
Reppas, N.B.1
Wade, J.T.2
Church, G.M.3
Struhl, K.4
-
40
-
-
2942548962
-
The arginine regulatory protein mediates repression by arginine of the operons encoding glutamate synthase and anabolic glutamate dehydrogenase in Pseudomonas aeruginosa
-
15175298. 10.1128/JB.186.12.3848
-
The arginine regulatory protein mediates repression by arginine of the operons encoding glutamate synthase and anabolic glutamate dehydrogenase in Pseudomonas aeruginosa. S Hashim D. H. Kwon, A. Abdelal and C. D. Lu, J Bacteriol 2004 186 3848 3854 15175298 10.1128/JB.186.12.3848-3854.2004
-
(2004)
J Bacteriol
, vol.186
, pp. 3848-3854
-
-
Kwon, H.D.H.S.1
Abdelal, A.2
Lu, C.D.3
-
41
-
-
0028149835
-
Expression of the genes coding for the Escherichia coli integration host factor are controlled by growth phase, rpoS, ppGpp and by autoregulation
-
7715442. 10.1111/j.1365-2958.1994.tb01336.x
-
Expression of the genes coding for the Escherichia coli integration host factor are controlled by growth phase, rpoS, ppGpp and by autoregulation. M Aviv H Giladi G Schreiber AB Oppenheim G Glaser, Mol Microbiol 1994 14 5 1021 1031 7715442 10.1111/j.1365-2958.1994.tb01336.x
-
(1994)
Mol Microbiol
, vol.14
, Issue.5
, pp. 1021-1031
-
-
Aviv, M.1
Giladi, H.2
Schreiber, G.3
Oppenheim, A.B.4
Glaser, G.5
-
42
-
-
10544251055
-
Effects of nutrition and growth rate on Lrp levels in Escherichia coli
-
8955316
-
Effects of nutrition and growth rate on Lrp levels in Escherichia coli. JR Landgraf J Wu JM Calvo, J Bacteriol 1996 178 23 6930 6936 8955316
-
(1996)
J Bacteriol
, vol.178
, Issue.23
, pp. 6930-6936
-
-
Landgraf, J.R.1
Wu, J.2
Calvo, J.M.3
-
43
-
-
18044367581
-
PpGpp: A global regulator in Escherichia coli
-
15866041. 10.1016/j.tim.2005.03.008
-
ppGpp: a global regulator in Escherichia coli. LU Magnusson A Farewell T Nystrom, Trends Microbiol 2005 13 5 236 242 15866041 10.1016/j.tim.2005.03.008
-
(2005)
Trends Microbiol
, vol.13
, Issue.5
, pp. 236-242
-
-
Magnusson, L.U.1
Farewell, A.2
Nystrom, T.3
-
44
-
-
0032190205
-
Transcriptional repression of gdhA in Escherichia coli is mediated by the Nac protein
-
9785451. 10.1111/j.1574-6968.1998.tb13206.x
-
Transcriptional repression of gdhA in Escherichia coli is mediated by the Nac protein. L Camarena S Poggio N Garcia A Osorio, FEMS Microbiol Lett 1998 167 1 51 56 9785451 10.1111/j.1574-6968.1998.tb13206.x
-
(1998)
FEMS Microbiol Lett
, vol.167
, Issue.1
, pp. 51-56
-
-
Camarena, L.1
Poggio, S.2
Garcia, N.3
Osorio, A.4
-
45
-
-
0031932849
-
The nac (nitrogen assimilation control) gene from Escherichia coli
-
9495755
-
The nac (nitrogen assimilation control) gene from Escherichia coli. WB Muse RA Bender, J Bacteriol 1998 180 5 1166 1173 9495755
-
(1998)
J Bacteriol
, vol.180
, Issue.5
, pp. 1166-1173
-
-
Muse, W.B.1
Bender, R.A.2
-
46
-
-
7444245668
-
Identification of the CRP regulon using in vitro and in vivo transcriptional profiling
-
15520470. 10.1093/nar/gkh908
-
Identification of the CRP regulon using in vitro and in vivo transcriptional profiling. D Zheng C Constantinidou JL Hobman SD Minchin, Nucleic Acids Res 2004 32 19 5874 5893 15520470 10.1093/nar/gkh908
-
(2004)
Nucleic Acids Res
, vol.32
, Issue.19
, pp. 5874-5893
-
-
Zheng, D.1
Constantinidou, C.2
Hobman, J.L.3
Minchin, S.D.4
-
47
-
-
17444406291
-
The multifarious short-term regulation of ammonium assimilation of Escherichia coli: Dissection using an in silico replica
-
15819889. 10.1111/j.1742-4658.2005.04626.x
-
The multifarious short-term regulation of ammonium assimilation of Escherichia coli: dissection using an in silico replica. FJ Bruggeman FC Boogerd HV Westerhoff, FEBS J 2005 272 8 1965 1985 15819889 10.1111/j.1742-4658.2005. 04626.x
-
(2005)
FEBS J
, vol.272
, Issue.8
, pp. 1965-1985
-
-
Bruggeman, F.J.1
Boogerd, F.C.2
Westerhoff, H.V.3
-
48
-
-
0030880188
-
The two opposing activities of adenylyl transferase reside in distinct homologous domains, with intramolecular signal transduction
-
9312015. 10.1093/emboj/16.18.5562
-
The two opposing activities of adenylyl transferase reside in distinct homologous domains, with intramolecular signal transduction. R Jaggi WC van Heeswijk HV Westerhoff DL Ollis SG Vasudevan, EMBO J 1997 16 18 5562 5571 9312015 10.1093/emboj/16.18.5562
-
(1997)
EMBO J
, vol.16
, Issue.18
, pp. 5562-5571
-
-
Jaggi, R.1
Van Heeswijk, W.C.2
Westerhoff, H.V.3
Ollis, D.L.4
Vasudevan, S.G.5
-
49
-
-
0032530281
-
The regulation of Escherichia coli glutamine synthetase revisited: Role of 2-ketoglutarate in the regulation of glutamine synthetase adenylylation state
-
9737857. 10.1021/bi980666u
-
The regulation of Escherichia coli glutamine synthetase revisited: role of 2-ketoglutarate in the regulation of glutamine synthetase adenylylation state. P Jiang JA Peliska AJ Ninfa, Biochemistry 1998 37 37 12802 12810 9737857 10.1021/bi980666u
-
(1998)
Biochemistry
, vol.37
, Issue.37
, pp. 12802-12810
-
-
Jiang, P.1
Peliska, J.A.2
Ninfa, A.J.3
-
50
-
-
0016283409
-
Culture medium for enterobacteria
-
4604283
-
Culture medium for enterobacteria. FC Neidhardt P. L. Bloch, and D. F. Smith, J Bacteriol 1974 119 736 747 4604283
-
(1974)
J Bacteriol
, vol.119
, pp. 736-747
-
-
Bloch, P.L.1
Smith, D.F.2
-
52
-
-
0347325071
-
Lysogeny at mid-twentieth century: P1, P2, and other experimental systems
-
14729683. 10.1128/JB.186.3.595-600.2004
-
Lysogeny at mid-twentieth century: P1, P2, and other experimental systems. G Bertani, J Bacteriol 2004 186 3 595 600 14729683 10.1128/JB.186.3. 595-600.2004
-
(2004)
J Bacteriol
, vol.186
, Issue.3
, pp. 595-600
-
-
Bertani, G.1
-
53
-
-
0031013799
-
Simultaneous introduction of multiple mutations using overlap extension PCR
-
8994639
-
Simultaneous introduction of multiple mutations using overlap extension PCR. L Ge and P. Rudolph, Biotechniques 1997 22 1 28 30 8994639
-
(1997)
Biotechniques
, vol.22
, Issue.1
, pp. 28-30
-
-
Ge, L.1
Rudolph, P.2
-
54
-
-
0030796260
-
Methods for generating precise deletions and insertions in the genome of wild-type Escherichia coli: Application to open reading frame characterization
-
9335267
-
Methods for generating precise deletions and insertions in the genome of wild-type Escherichia coli: Application to open reading frame characterization. AJ Link Phillips, D. and Church, G.M., J Bacteriol 1997 179 20 6228 6237 9335267
-
(1997)
J Bacteriol
, vol.179
, Issue.20
, pp. 6228-6237
-
-
Link Phillips, A.J.1
Church, G.M.2
-
55
-
-
0003785155
-
-
Cold spring harbor, N. Y. , Cold Spring Harbor Laboratory Press
-
Experiments in molecular genetics. JH Miller, Cold spring harbor, N. Y., Cold Spring Harbor Laboratory Press 1972
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
56
-
-
0030880717
-
Solution structure of the DNA-binding domain and model for the complex of mutlifunctional hexameric arginine repressor with DNA
-
9334747. 10.1038/nsb1097-819
-
Solution structure of the DNA-binding domain and model for the complex of mutlifunctional hexameric arginine repressor with DNA. M Sunnerhagen M. Nilges, G. Otting, and J. Carey, Nat Struct Biol 1997 4 10 819 825 9334747 10.1038/nsb1097-819
-
(1997)
Nat Struct Biol
, vol.4
, Issue.10
, pp. 819-825
-
-
Nilges, M.S.M.1
Otting, G.2
Carey, J.3
-
57
-
-
0036795657
-
Ni+-Affinity purification of untagged cAMP receptor protein
-
12398175
-
Ni+-Affinity purification of untagged cAMP receptor protein. JR Wickstrum and S. M. Egan, Biotechniques 2002 33 4 728 730 12398175
-
(2002)
Biotechniques
, vol.33
, Issue.4
, pp. 728-730
-
-
Wickstrum, J.R.1
Egan, S.M.2
-
58
-
-
0028030486
-
Purification of Escherichia coli integration host factor (IHF) in one chromatographic step
-
8088542. 10.1016/0378-1119(94)90056
-
Purification of Escherichia coli integration host factor (IHF) in one chromatographic step. M Filutowicz H. Grimek, and K. Appelt, Gene 1994 147 149 150 8088542 10.1016/0378-1119(94)90056-6
-
(1994)
Gene
, vol.147-156
, pp. 149-150
-
-
Grimek, H.F.M.1
Appelt, K.2
-
59
-
-
0025288248
-
The ilvIH operon of Escherichia coli is positively regulated
-
2115869
-
The ilvIH operon of Escherichia coli is positively regulated. JV Platko D. A. Willins, and J. M. Calvo, J Bacteriol 1990 172 4563 4570 2115869
-
(1990)
J Bacteriol
, vol.172
, pp. 4563-4570
-
-
Willins, D.A.1
Calvo, J.M.2
-
60
-
-
0345196588
-
Catabolic repression of secB expression is positively controlled by cyclic AMP (cAMP) receptor protein-cAMP complexes at the transcriptional level
-
10074084
-
Catabolic repression of secB expression is positively controlled by cyclic AMP (cAMP) receptor protein-cAMP complexes at the transcriptional level. HK Seoh and P. C. Tai, J Bacteriol 1999 181 1892 1899 10074084
-
(1999)
J Bacteriol
, vol.181
, pp. 1892-1899
-
-
Seoh, H.K.1
Tai, P.C.2
-
61
-
-
0021271212
-
Plasmid vectors for the selection of promoters
-
6327464. 10.1016/0378-1119(84)90136-7
-
Plasmid vectors for the selection of promoters. J Brosius, Gene 1984 27 2 151 160 6327464 10.1016/0378-1119(84)90136-7
-
(1984)
Gene
, vol.27
, Issue.2
, pp. 151-160
-
-
Brosius, J.1
-
62
-
-
11844250013
-
Nature of the promoter activated by C.PvuII, an unusual regulatory protein conserved among restriction-modification systems
-
15629920. 10.1128/JB.187.2.488-497.2005
-
Nature of the promoter activated by C.PvuII, an unusual regulatory protein conserved among restriction-modification systems. D Knowle RE Lintner YM Touma RM Blumenthal, J Bacteriol 2005 187 2 488 497 15629920 10.1128/JB.187.2.488-497.2005
-
(2005)
J Bacteriol
, vol.187
, Issue.2
, pp. 488-497
-
-
Knowle, D.1
Lintner, R.E.2
Touma, Y.M.3
Blumenthal, R.M.4
-
63
-
-
84872264116
-
-
http://biocyc.org/ECOLI/. BioCyc
-
-
-
Biocyc1
-
64
-
-
0035234702
-
Conservation of the binding site for the arginine repressor in all bacterial lineages
-
11305941. 10.1186/gb-2001-2-4-research0013
-
Conservation of the binding site for the arginine repressor in all bacterial lineages. KS Makarova AA Mironov MS Gelfand, Genome Biol 2001 2 4 RESEARCH0013 11305941 10.1186/gb-2001-2-4-research0013
-
(2001)
Genome Biol
, vol.2
, Issue.4
, pp. 0013
-
-
Makarova, K.S.1
Mironov, A.A.2
Gelfand, M.S.3
|