-
1
-
-
76349119916
-
Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities
-
Andersson AF, Riemann L, Bertilsson S (2010) Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities. The ISME Journal, 4, 171–181.
-
(2010)
The ISME Journal
, vol.4
, pp. 171-181
-
-
Andersson, A.F.1
Riemann, L.2
Bertilsson, S.3
-
2
-
-
41149170221
-
Yield and spatial supply of bioenergy poplar and willow short-rotation coppice in the UK
-
Aylott MJ, Casella E, Tubby I, Street NR, Smith P, Taylor G (2008) Yield and spatial supply of bioenergy poplar and willow short-rotation coppice in the UK. The New Phytologist, 178, 358–370.
-
(2008)
The New Phytologist
, vol.178
, pp. 358-370
-
-
Aylott, M.J.1
Casella, E.2
Tubby, I.3
Street, N.R.4
Smith, P.5
Taylor, G.6
-
3
-
-
84872602495
-
Growth response of crops to soil microbial communities from conventional monocropping and tree-based intercropping systems
-
Bainard LD, Koch AM, Gordon AM, Klironomos JN (2012a) Growth response of crops to soil microbial communities from conventional monocropping and tree-based intercropping systems. Plant and Soil, 363, 345–356.
-
(2012)
Plant and Soil
, vol.363
, pp. 345-356
-
-
Bainard, L.D.1
Koch, A.M.2
Gordon, A.M.3
Klironomos, J.N.4
-
4
-
-
83655203147
-
Temporal and compositional differences of arbuscular mycorrhizal fungal communities in conventional monocropping and tree-based intercropping systems
-
Bainard LD, Koch AM, Gordon AM, Klironomos JN (2012b) Temporal and compositional differences of arbuscular mycorrhizal fungal communities in conventional monocropping and tree-based intercropping systems. Soil Biology and Biochemistry, 45, 172–180.
-
(2012)
Soil Biology and Biochemistry
, vol.45
, pp. 172-180
-
-
Bainard, L.D.1
Koch, A.M.2
Gordon, A.M.3
Klironomos, J.N.4
-
5
-
-
80855133556
-
Potential accumulative effect of the herbicide glyphosate on glyphosate-tolerant maize rhizobacterial communities over a three-year cultivation period
-
Barriuso J, Marín S, Mellado RP (2011) Potential accumulative effect of the herbicide glyphosate on glyphosate-tolerant maize rhizobacterial communities over a three-year cultivation period. PLoS One, 6, e27558.
-
(2011)
PLoS One
, vol.6
-
-
Barriuso, J.1
Marín, S.2
Mellado, R.P.3
-
6
-
-
70350400727
-
The significance of host-fungus combinations in ectomycorrhizal symbioses for the chemical quality of willow foliage
-
Baum C, Toljander YK, Eckhardt K-U, Weih M (2009) The significance of host-fungus combinations in ectomycorrhizal symbioses for the chemical quality of willow foliage. Plant and Soil, 323, 213–224.
-
(2009)
Plant and Soil
, vol.323
, pp. 213-224
-
-
Baum, C.1
Toljander, Y.K.2
Eckhardt, K.-U.3
Weih, M.4
-
8
-
-
84872242032
-
Microbial population and community dynamics on plant roots and their feedbacks on plant communities
-
Bever JD, Platt TG, Morton ER (2012) Microbial population and community dynamics on plant roots and their feedbacks on plant communities. Annual Review of Microbiology, 66, 265–283.
-
(2012)
Annual Review of Microbiology
, vol.66
, pp. 265-283
-
-
Bever, J.D.1
Platt, T.G.2
Morton, E.R.3
-
9
-
-
34248218618
-
Molecular analysis of fungal communities and laccase genes in decomposing litter reveals differences among forest types but no impact of nitrogen deposition
-
Blackwood CB, Waldrop MP, Zak DR, Sinsabaugh RL (2007) Molecular analysis of fungal communities and laccase genes in decomposing litter reveals differences among forest types but no impact of nitrogen deposition. Environmental Microbiology, 9, 1306–1316.
-
(2007)
Environmental Microbiology
, vol.9
, pp. 1306-1316
-
-
Blackwood, C.B.1
Waldrop, M.P.2
Zak, D.R.3
Sinsabaugh, R.L.4
-
10
-
-
38949193995
-
Root exudates regulate soil fungal community composition and diversity
-
Broeckling CD, Broz AK, Bergelson J, Manter DK, Vivanco JM (2008) Root exudates regulate soil fungal community composition and diversity. Applied and Environmental Microbiology, 74, 738–744.
-
(2008)
Applied and Environmental Microbiology
, vol.74
, pp. 738-744
-
-
Broeckling, C.D.1
Broz, A.K.2
Bergelson, J.3
Manter, D.K.4
Vivanco, J.M.5
-
12
-
-
0034533517
-
Influence of phenol on biodegradation of p-nitrophenol by freely suspended and immobilized Nocardioides sp. NSP41
-
Cho Y-G, Rhee S-K, Lee S-T (2000) Influence of phenol on biodegradation of p-nitrophenol by freely suspended and immobilized Nocardioides sp. NSP41. Biodegradation, 11, 21–28.
-
(2000)
Biodegradation
, vol.11
, pp. 21-28
-
-
Cho, Y.-G.1
Rhee, S.-K.2
Lee, S.-T.3
-
13
-
-
0027804103
-
Non-parametric multivariate analyses of changes in community structure
-
Clarke KR (1993) Non-parametric multivariate analyses of changes in community structure. Austral Ecology, 18, 117–143.
-
(1993)
Austral Ecology
, vol.18
, pp. 117-143
-
-
Clarke, K.R.1
-
14
-
-
77949264819
-
Plant growth-promoting bacteria in the rhizo- and endosphere of plants: their role, colonization, mechanisms involved and prospects for utilization
-
Compant S, Clément C, Sessitsch A (2010) Plant growth-promoting bacteria in the rhizo- and endosphere of plants: their role, colonization, mechanisms involved and prospects for utilization. Soil Biology and Biochemistry, 42, 669–678.
-
(2010)
Soil Biology and Biochemistry
, vol.42
, pp. 669-678
-
-
Compant, S.1
Clément, C.2
Sessitsch, A.3
-
15
-
-
84864397711
-
Changes in root-associated fungal assemblages within newly established clonal biomass plantations of Salix spp
-
Corredor AH, Van Rees K, Vujanovic V (2012) Changes in root-associated fungal assemblages within newly established clonal biomass plantations of Salix spp. Forest Ecology and Management, 282, 105–114.
-
(2012)
Forest Ecology and Management
, vol.282
, pp. 105-114
-
-
Corredor, A.H.1
Van Rees, K.2
Vujanovic, V.3
-
16
-
-
67549086723
-
Despite strong seasonal responses, soil microbial consortia are more resilient to long-term changes in rainfall than overlying grassland
-
Cruz-Martínez K, Suttle KB, Brodie EL, Power ME, Andersen GL, Banfield JF (2009) Despite strong seasonal responses, soil microbial consortia are more resilient to long-term changes in rainfall than overlying grassland. The ISME Journal, 3, 738–744.
-
(2009)
The ISME Journal
, vol.3
, pp. 738-744
-
-
Cruz-Martínez, K.1
Suttle, K.B.2
Brodie, E.L.3
Power, M.E.4
Andersen, G.L.5
Banfield, J.F.6
-
17
-
-
84874921990
-
Fungal soil communities in a young transgenic poplar plantation form a rich reservoir for fungal root communities
-
Danielsen L, Thürmer A, Meinicke P et al. (2012) Fungal soil communities in a young transgenic poplar plantation form a rich reservoir for fungal root communities. Ecology and Evolution, 2, 1935–1948.
-
(2012)
Ecology and Evolution
, vol.2
, pp. 1935-1948
-
-
Danielsen, L.1
Thürmer, A.2
Meinicke, P.3
-
18
-
-
84869240822
-
Harvesting carbon from Eastern US forests: opportunities and impacts of an expanding bioenergy industry
-
Davis SC, Dietze M, DeLucia E et al. (2012) Harvesting carbon from Eastern US forests: opportunities and impacts of an expanding bioenergy industry. Forests, 3, 370–397.
-
(2012)
Forests
, vol.3
, pp. 370-397
-
-
Davis, S.C.1
Dietze, M.2
DeLucia, E.3
-
19
-
-
35148839449
-
Changes in bacterial populations and in biphenyl dioxygenase gene diversity in a polychlorinated biphenyl-polluted soil after introduction of willow trees for rhizoremediation
-
De Cárcer DA, Martín M, Karlson U, Rivilla R (2007) Changes in bacterial populations and in biphenyl dioxygenase gene diversity in a polychlorinated biphenyl-polluted soil after introduction of willow trees for rhizoremediation. Applied and Environmental Microbiology, 73, 6224–6232.
-
(2007)
Applied and Environmental Microbiology
, vol.73
, pp. 6224-6232
-
-
De Cárcer, D.A.1
Martín, M.2
Karlson, U.3
Rivilla, R.4
-
20
-
-
41149164224
-
The importance of bioethanol and biodiesel from biomass
-
Demirbas A (2008) The importance of bioethanol and biodiesel from biomass. Energy Sources, Part B: Economics, Planning, and Policy, 3, 177–185.
-
(2008)
Energy Sources, Part B: Economics, Planning, and Policy
, vol.3
, pp. 177-185
-
-
Demirbas, A.1
-
21
-
-
1842269312
-
Identity and frequency of occurrence of Trichoderma spp. in roots of wheat and rye-grass in Western Australia and their effect on root rot caused by Gaeumannomyces graminis var. tritici
-
Dewan MM, Sivasithamparam K (1988) Identity and frequency of occurrence of Trichoderma spp. in roots of wheat and rye-grass in Western Australia and their effect on root rot caused by Gaeumannomyces graminis var. tritici. Plant and Soil, 109, 93–101.
-
(1988)
Plant and Soil
, vol.109
, pp. 93-101
-
-
Dewan, M.M.1
Sivasithamparam, K.2
-
22
-
-
0141791299
-
Spectrophotometric determination of nitrate with a single reagent
-
Doane TA, Horwáth WR (2003) Spectrophotometric determination of nitrate with a single reagent. Analytical Letters, 36, 2713–2722.
-
(2003)
Analytical Letters
, vol.36
, pp. 2713-2722
-
-
Doane, T.A.1
Horwáth, W.R.2
-
23
-
-
84881614887
-
Arbuscular mycorrhizal symbiosis alleviates drought stress imposed on Knautia arvensis plants in serpentine soil
-
Doubková P, Vlasáková E, Sudová R (2013) Arbuscular mycorrhizal symbiosis alleviates drought stress imposed on Knautia arvensis plants in serpentine soil. Plant and Soil, 370, 149–161.
-
(2013)
Plant and Soil
, vol.370
, pp. 149-161
-
-
Doubková, P.1
Vlasáková, E.2
Sudová, R.3
-
24
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar RC (2010) Search and clustering orders of magnitude faster than BLAST. Bioinformatics (Oxford, England), 26, 2460–2461.
-
(2010)
Bioinformatics (Oxford, England)
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
25
-
-
79960326197
-
Energy Independence and Security Act
-
EISA (2007) Energy Independence and Security Act. Public Law, pp. 110–140.
-
(2007)
Public Law
, pp. 110-140
-
-
-
26
-
-
84985351627
-
Reciprocal transfer of nutrients between ericaceous plants and a Clavaria sp
-
Englander L, Hull RJ (1980) Reciprocal transfer of nutrients between ericaceous plants and a Clavaria sp. New Phytologist, 84, 661–667.
-
(1980)
New Phytologist
, vol.84
, pp. 661-667
-
-
Englander, L.1
Hull, R.J.2
-
27
-
-
0037389818
-
The nitrogen cascade
-
Galloway JN, Aber JD, Erisman JW, Seitzinger SP, Howarth RW, Cowling EB, Cosby BJ (2003) The nitrogen cascade. BioScience, 53, 341.
-
(2003)
BioScience
, vol.53
, pp. 341
-
-
Galloway, J.N.1
Aber, J.D.2
Erisman, J.W.3
Seitzinger, S.P.4
Howarth, R.W.5
Cowling, E.B.6
Cosby, B.J.7
-
28
-
-
4744340843
-
Microbial diversity in soil: selection microbial populations by plant and soil type and implications for disease suppressiveness
-
Garbeva P, van Veen JA, van Elsas JD (2004) Microbial diversity in soil: selection microbial populations by plant and soil type and implications for disease suppressiveness. Annual Review of Phytopathology, 42, 243–270.
-
(2004)
Annual Review of Phytopathology
, vol.42
, pp. 243-270
-
-
Garbeva, P.1
van Veen, J.A.2
van Elsas, J.D.3
-
29
-
-
80051784964
-
Biorefineries from the perspective of sustainability: feedstocks, products, and processes
-
Ghatak HR (2011) Biorefineries from the perspective of sustainability: feedstocks, products, and processes. Renewable and Sustainable Energy Reviews, 15, 4042–4052.
-
(2011)
Renewable and Sustainable Energy Reviews
, vol.15
, pp. 4042-4052
-
-
Ghatak, H.R.1
-
30
-
-
0028963988
-
The enhancement of plant growth by free-living bacteria
-
Glick BR (1995) The enhancement of plant growth by free-living bacteria. Canadian Journal of Microbiology, 41, 109–117.
-
(1995)
Canadian Journal of Microbiology
, vol.41
, pp. 109-117
-
-
Glick, B.R.1
-
31
-
-
0025525405
-
Degradation of 2,4,5-Trichlorophenoxyacetic acid by a Nocardioides simplex culture
-
Golovleva LA, Pertsova RN, Evtushenko LI, Baskunov BP (1990) Degradation of 2,4,5-Trichlorophenoxyacetic acid by a Nocardioides simplex culture. Biodegradation, 1, 263–271.
-
(1990)
Biodegradation
, vol.1
, pp. 263-271
-
-
Golovleva, L.A.1
Pertsova, R.N.2
Evtushenko, L.I.3
Baskunov, B.P.4
-
32
-
-
68049140908
-
Biofuels, land, and water: a systems approach to sustainability
-
Gopalakrishnan G, Negri MC, Wang M, Wu M, Snyder SW, LaFreniere L (2009) Biofuels, land, and water: a systems approach to sustainability. Environmental Science & Technology, 43, 6094–6100.
-
(2009)
Environmental Science & Technology
, vol.43
, pp. 6094-6100
-
-
Gopalakrishnan, G.1
Negri, M.C.2
Wang, M.3
Wu, M.4
Snyder, S.W.5
LaFreniere, L.6
-
33
-
-
80052769418
-
Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types
-
Gottel NR, Castro HF, Kerley M et al. (2011) Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types. Applied and Environmental Microbiology, 77, 5934–5944.
-
(2011)
Applied and Environmental Microbiology
, vol.77
, pp. 5934-5944
-
-
Gottel, N.R.1
Castro, H.F.2
Kerley, M.3
-
34
-
-
15244362068
-
Microbial communities in forest floors under four tree species in coastal British Columbia
-
Grayston SJ, Prescott CE (2005) Microbial communities in forest floors under four tree species in coastal British Columbia. Soil Biology and Biochemistry, 37, 1157–1167.
-
(2005)
Soil Biology and Biochemistry
, vol.37
, pp. 1157-1167
-
-
Grayston, S.J.1
Prescott, C.E.2
-
35
-
-
0002872778
-
Poplar woody biomass yields: a look to the future
-
Hansen EA (1991) Poplar woody biomass yields: a look to the future. Biomass and Bioenergy, 1, 1–7.
-
(1991)
Biomass and Bioenergy
, vol.1
, pp. 1-7
-
-
Hansen, E.A.1
-
36
-
-
84862499239
-
Beyond biogeographic patterns: processes shaping the microbial landscape
-
Hanson CA, Fuhrman JA, Horner-Devine MC, Martiny JBH (2012) Beyond biogeographic patterns: processes shaping the microbial landscape. Nature Reviews. Microbiology, 10, 497–506.
-
(2012)
Nature Reviews. Microbiology
, vol.10
, pp. 497-506
-
-
Hanson, C.A.1
Fuhrman, J.A.2
Horner-Devine, M.C.3
Martiny, J.B.H.4
-
37
-
-
33746655320
-
Environmental, economic, and energetic costs and benefits of biodiesel and ethanol biofuels
-
Hill J, Nelson E, Tilman D, Polasky S, Tiffany D (2006) Environmental, economic, and energetic costs and benefits of biodiesel and ethanol biofuels. Proceedings of the National Academy of Sciences, USA, 103, 11206–11210.
-
(2006)
Proceedings of the National Academy of Sciences, USA
, vol.103
, pp. 11206-11210
-
-
Hill, J.1
Nelson, E.2
Tilman, D.3
Polasky, S.4
Tiffany, D.5
-
38
-
-
83155185433
-
Effect of genetically modified poplars on soil microbial communities during the phytoremediation of waste mine tailings
-
Hur M, Kim Y, Song H-R, Kim JM, Choi YI, Yi H (2011) Effect of genetically modified poplars on soil microbial communities during the phytoremediation of waste mine tailings. Applied and Environmental Microbiology, 77, 7611–7619.
-
(2011)
Applied and Environmental Microbiology
, vol.77
, pp. 7611-7619
-
-
Hur, M.1
Kim, Y.2
Song, H.-R.3
Kim, J.M.4
Choi, Y.I.5
Yi, H.6
-
39
-
-
0030861103
-
Biochemical and genetic characterization of 2-carboxybenzaldehyde dehydrogenase, an enzyme involved in phenanthrene degradation by Nocardioides sp. strain KP7
-
Iwabuchi T, Harayama S (1997) Biochemical and genetic characterization of 2-carboxybenzaldehyde dehydrogenase, an enzyme involved in phenanthrene degradation by Nocardioides sp. strain KP7. Journal of Bacteriology, 179, 6488–6494.
-
(1997)
Journal of Bacteriology
, vol.179
, pp. 6488-6494
-
-
Iwabuchi, T.1
Harayama, S.2
-
40
-
-
80051672001
-
Land-use history has a stronger impact on soil microbial community composition than aboveground vegetation and soil properties
-
Jangid K, Williams MA, Franzluebbers AJ, Schmidt TM, Coleman DC, Whitman WB (2011) Land-use history has a stronger impact on soil microbial community composition than aboveground vegetation and soil properties. Soil Biology and Biochemistry, 43, 2184–2193.
-
(2011)
Soil Biology and Biochemistry
, vol.43
, pp. 2184-2193
-
-
Jangid, K.1
Williams, M.A.2
Franzluebbers, A.J.3
Schmidt, T.M.4
Coleman, D.C.5
Whitman, W.B.6
-
41
-
-
84907024793
-
Influence of arbuscular mycorrhiza on growth and reproductive response of plants under water deficit: a meta-analysis
-
Jayne B, Quigley M (2014) Influence of arbuscular mycorrhiza on growth and reproductive response of plants under water deficit: a meta-analysis. Mycorrhiza, 24, 109–119.
-
(2014)
Mycorrhiza
, vol.24
, pp. 109-119
-
-
Jayne, B.1
Quigley, M.2
-
42
-
-
0003804933
-
-
10th edn, CABI, Wallingford
-
Kirk M, Cannon P, Minter D, Stalpers J (2008) Dictionary of the Fungi (10th edn). CABI, Wallingford.
-
(2008)
Dictionary of the Fungi
-
-
Kirk, M.1
Cannon, P.2
Minter, D.3
Stalpers, J.4
-
43
-
-
84857438893
-
Diversity measures in environmental sequences are highly dependent on alignment quality-data from ITS and new LSU primers targeting basidiomycetes
-
Krüger D, Kapturska D, Fischer C, Daniel R, Wubet T (2012) Diversity measures in environmental sequences are highly dependent on alignment quality-data from ITS and new LSU primers targeting basidiomycetes. PLoS One, 7, e32139.
-
(2012)
PLoS One
, vol.7
-
-
Krüger, D.1
Kapturska, D.2
Fischer, C.3
Daniel, R.4
Wubet, T.5
-
44
-
-
84973395616
-
-
Springer, Berlin Heidelberg, Berlin
-
Kubicek CP, Druzhinina IS (2007) Environmental and Microbial Relationships, Vol 4, pp. 47–68. Springer, Berlin Heidelberg, Berlin.
-
(2007)
Environmental and Microbial Relationships
, vol.4
, pp. 47-68
-
-
Kubicek, C.P.1
Druzhinina, I.S.2
-
45
-
-
18544380709
-
Field performance and biomass production of 12 willow and poplar clones in short-rotation coppice in southern Quebec (Canada)
-
Labrecque M, Teodorescu TI (2005) Field performance and biomass production of 12 willow and poplar clones in short-rotation coppice in southern Quebec (Canada). Biomass and Bioenergy, 29, 1–9.
-
(2005)
Biomass and Bioenergy
, vol.29
, pp. 1-9
-
-
Labrecque, M.1
Teodorescu, T.I.2
-
46
-
-
67651247607
-
Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale
-
Lauber CL, Hamady M, Knight R, Fierer N (2009) Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale. Applied and Environmental Microbiology, 75, 5111–5120.
-
(2009)
Applied and Environmental Microbiology
, vol.75
, pp. 5111-5120
-
-
Lauber, C.L.1
Hamady, M.2
Knight, R.3
Fierer, N.4
-
47
-
-
29244438198
-
Microbial community structure and density under different tree species in an acid forest soil (Morvan, France)
-
Lejon DPH, Chaussod R, Ranger J, Ranjard L (2005) Microbial community structure and density under different tree species in an acid forest soil (Morvan, France). Microbial Ecology, 50, 614–625.
-
(2005)
Microbial Ecology
, vol.50
, pp. 614-625
-
-
Lejon, D.P.H.1
Chaussod, R.2
Ranger, J.3
Ranjard, L.4
-
48
-
-
84919729851
-
Plant responses to plant growth-promoting rhizobacteria
-
Loon LC (2007) Plant responses to plant growth-promoting rhizobacteria. European Journal of Plant Pathology, 119, 243–254.
-
(2007)
European Journal of Plant Pathology
, vol.119
, pp. 243-254
-
-
Loon, L.C.1
-
50
-
-
67650081180
-
Physiological, biochemical and molecular responses of the soil microbial community after afforestation of pastures with Pinus radiata
-
Macdonald CA, Thomas N, Robinson L, Tate KR, Ross DJ, Dando J, Singh BK (2009) Physiological, biochemical and molecular responses of the soil microbial community after afforestation of pastures with Pinus radiata. Soil Biology and Biochemistry, 41, 1642–1651.
-
(2009)
Soil Biology and Biochemistry
, vol.41
, pp. 1642-1651
-
-
Macdonald, C.A.1
Thomas, N.2
Robinson, L.3
Tate, K.R.4
Ross, D.J.5
Dando, J.6
Singh, B.K.7
-
51
-
-
84973283708
-
Recent land cover change to agriculture in the Lake States, USA: implications for perennial cellulosic biomass production
-
In Press
-
Mladenoff DJ, Sahajpal R, Johnson CP, Rothstein DE (2015) Recent land cover change to agriculture in the Lake States, USA: implications for perennial cellulosic biomass production. Ecosphere, In Press.
-
(2015)
Ecosphere
-
-
Mladenoff, D.J.1
Sahajpal, R.2
Johnson, C.P.3
Rothstein, D.E.4
-
53
-
-
79951926011
-
Pyrosequencing-based assessment of bacterial community structure along different management types in German forest and grassland soils
-
Nacke H, Thürmer A, Wollherr A et al. (2011) Pyrosequencing-based assessment of bacterial community structure along different management types in German forest and grassland soils. PLoS One, 6, e17000.
-
(2011)
PLoS One
, vol.6
-
-
Nacke, H.1
Thürmer, A.2
Wollherr, A.3
-
54
-
-
84857784479
-
Initial greenhouse gas emissions and nitrogen leaching losses associated with converting pastureland to short-rotation woody bioenergy crops in northern Michigan, USA
-
Nikièma P, Rothstein DE, Miller RO (2012) Initial greenhouse gas emissions and nitrogen leaching losses associated with converting pastureland to short-rotation woody bioenergy crops in northern Michigan, USA. Biomass and Bioenergy, 39, 413–426.
-
(2012)
Biomass and Bioenergy
, vol.39
, pp. 413-426
-
-
Nikièma, P.1
Rothstein, D.E.2
Miller, R.O.3
-
55
-
-
17644436677
-
Soil bacterial community shift correlated with change from forest to pasture vegetation in a tropical soil
-
Nusslein K, Tiedje JM (1999) Soil bacterial community shift correlated with change from forest to pasture vegetation in a tropical soil. Applied and Environmental Microbiology, 65, 3622–3626.
-
(1999)
Applied and Environmental Microbiology
, vol.65
, pp. 3622-3626
-
-
Nusslein, K.1
Tiedje, J.M.2
-
57
-
-
84896739445
-
Establishment phase greenhouse gas emissions in short rotation woody biomass plantations in the Northern Lake States, USA
-
Palmer MM, Forrester JA, Rothstein DE, Mladenoff DJ (2014) Establishment phase greenhouse gas emissions in short rotation woody biomass plantations in the Northern Lake States, USA. Biomass and Bioenergy, 62, 26–36.
-
(2014)
Biomass and Bioenergy
, vol.62
, pp. 26-36
-
-
Palmer, M.M.1
Forrester, J.A.2
Rothstein, D.E.3
Mladenoff, D.J.4
-
58
-
-
84886697864
-
Fungal diversity in permafrost and tallgrass prairie soils under experimental warming conditions
-
Penton CR, St Louis D, Cole JR et al. (2013) Fungal diversity in permafrost and tallgrass prairie soils under experimental warming conditions. Applied and Environmental Microbiology, 79, 7063–7072.
-
(2013)
Applied and Environmental Microbiology
, vol.79
, pp. 7063-7072
-
-
Penton, C.R.1
St Louis, D.2
Cole, J.R.3
-
59
-
-
16044367468
-
A new species of Clavaria fruiting with Vaccinium
-
Petersen RH, Litten W (1989) A new species of Clavaria fruiting with Vaccinium. Mycologia, 81, 325–327.
-
(1989)
Mycologia
, vol.81
, pp. 325-327
-
-
Petersen, R.H.1
Litten, W.2
-
60
-
-
84923284101
-
Intercropped silviculture systems, a key to achieving soil fungal community management in eucalyptus plantations
-
Rachid CTCC, Balieiro FC, Fonseca ES, Peixoto RS, Chaer GM, Tiedje JM, Rosado AS (2015) Intercropped silviculture systems, a key to achieving soil fungal community management in eucalyptus plantations. PLoS One, 10, e0118515.
-
(2015)
PLoS One
, vol.10
-
-
Rachid, C.T.C.C.1
Balieiro, F.C.2
Fonseca, E.S.3
Peixoto, R.S.4
Chaer, G.M.5
Tiedje, J.M.6
Rosado, A.S.7
-
61
-
-
0002598552
-
Waxcap-grassland survey
-
Rotheroe M, Newton A, Evans S, Feehan J (1996) Waxcap-grassland survey. Mycologist, 10, 23–25.
-
(1996)
Mycologist
, vol.10
, pp. 23-25
-
-
Rotheroe, M.1
Newton, A.2
Evans, S.3
Feehan, J.4
-
62
-
-
77956996314
-
Soil bacterial and fungal communities across a pH gradient in an arable soil
-
Rousk J, Bååth E, Brookes PC et al. (2010) Soil bacterial and fungal communities across a pH gradient in an arable soil. The ISME Journal, 4, 1340–1351.
-
(2010)
The ISME Journal
, vol.4
, pp. 1340-1351
-
-
Rousk, J.1
Bååth, E.2
Brookes, P.C.3
-
63
-
-
84973282617
-
Grassland fungi and the management history of St. Dunstan's farm
-
Russell P (2005) Grassland fungi and the management history of St. Dunstan's farm. Field Mycology, 6, 85–91.
-
(2005)
Field Mycology
, vol.6
, pp. 85-91
-
-
Russell, P.1
-
64
-
-
60449095481
-
Diversity and structure of the fungal endophytic assemblages from two sympatric coastal grasses
-
Sánchez Márquez S, Bills GF, Zabalgogeazcoa I (2008) Diversity and structure of the fungal endophytic assemblages from two sympatric coastal grasses. Fungal Diversity, 33, 87–100.
-
(2008)
Fungal Diversity
, vol.33
, pp. 87-100
-
-
Sánchez Márquez, S.1
Bills, G.F.2
Zabalgogeazcoa, I.3
-
65
-
-
42249090569
-
Plant–soil–microorganisms interactions: heritable relationship between plant genotype and associated soil microorganisms
-
Schweitzer JA, Bailey JK, Fischer DG, LeRoy CJ, Lonsdorf EV, Whitham TG, Hart SC (2008) Plant–soil–microorganisms interactions: heritable relationship between plant genotype and associated soil microorganisms. Ecology, 89, 773–781.
-
(2008)
Ecology
, vol.89
, pp. 773-781
-
-
Schweitzer, J.A.1
Bailey, J.K.2
Fischer, D.G.3
LeRoy, C.J.4
Lonsdorf, E.V.5
Whitham, T.G.6
Hart, S.C.7
-
66
-
-
84901611011
-
Deep 16S rRNA pyrosequencing reveals a bacterial community associated with banana Fusarium Wilt disease suppression induced by bio-organic fertilizer application
-
Shen Z, Wang D, Ruan Y, Xue C, Zhang J, Li R, Shen Q (2014) Deep 16S rRNA pyrosequencing reveals a bacterial community associated with banana Fusarium Wilt disease suppression induced by bio-organic fertilizer application. PLoS One, 9, e98420.
-
(2014)
PLoS One
, vol.9
-
-
Shen, Z.1
Wang, D.2
Ruan, Y.3
Xue, C.4
Zhang, J.5
Li, R.6
Shen, Q.7
-
67
-
-
53749097185
-
Root hydraulic properties and growth of balsam poplar (Populus balsamifera) mycorrhizal with Hebeloma crustuliniforme and Wilcoxina mikolae var. mikolae
-
Siemens JA, Zwiazek JJ (2008) Root hydraulic properties and growth of balsam poplar (Populus balsamifera) mycorrhizal with Hebeloma crustuliniforme and Wilcoxina mikolae var. mikolae. Mycorrhiza, 18, 393–401.
-
(2008)
Mycorrhiza
, vol.18
, pp. 393-401
-
-
Siemens, J.A.1
Zwiazek, J.J.2
-
68
-
-
0034516795
-
Rapid assay for amidohydrolase (urease) activity in environmental samples
-
Sinsabaugh R, Reynolds H, Long T (2000) Rapid assay for amidohydrolase (urease) activity in environmental samples. Soil Biology and Biochemistry, 32, 2095–2097.
-
(2000)
Soil Biology and Biochemistry
, vol.32
, pp. 2095-2097
-
-
Sinsabaugh, R.1
Reynolds, H.2
Long, T.3
-
69
-
-
0035487320
-
Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed
-
Smalla K, Wieland G, Buchner A et al. (2001) Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Applied and Environmental Microbiology, 67, 4742–4751.
-
(2001)
Applied and Environmental Microbiology
, vol.67
, pp. 4742-4751
-
-
Smalla, K.1
Wieland, G.2
Buchner, A.3
-
71
-
-
84963034277
-
Multiple regression and correlation extensions of the mantel test of matrix correspondence
-
Smouse PE, Long JC, Sokal RR (1986) Multiple regression and correlation extensions of the mantel test of matrix correspondence. Systematic Zoology, 35, 627–632.
-
(1986)
Systematic Zoology
, vol.35
, pp. 627-632
-
-
Smouse, P.E.1
Long, J.C.2
Sokal, R.R.3
-
72
-
-
0032948484
-
Fungal presence in paired cultivated and uncultivated soils in central Iowa, USA
-
Stahl PD, Parkin TB, Christensen M (1999) Fungal presence in paired cultivated and uncultivated soils in central Iowa, USA. Biology and Fertility of Soils, 29, 92–97.
-
(1999)
Biology and Fertility of Soils
, vol.29
, pp. 92-97
-
-
Stahl, P.D.1
Parkin, T.B.2
Christensen, M.3
-
73
-
-
79955831916
-
Response of endophytic fungi of Stipa grandis to experimental plant function group removal in Inner Mongolia steppe, China
-
Su Y-Y, Guo L-D, Hyde KD (2010) Response of endophytic fungi of Stipa grandis to experimental plant function group removal in Inner Mongolia steppe, China. Fungal Diversity, 43, 93–101.
-
(2010)
Fungal Diversity
, vol.43
, pp. 93-101
-
-
Su, Y.-Y.1
Guo, L.-D.2
Hyde, K.D.3
-
74
-
-
80052300610
-
Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering
-
Sul WJ, Cole JR, Jesus EdaC, Wang Q, Farris RJ, Fish JA, Tiedje JM (2011) Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering. Proceedings of the National Academy of Sciences, USA, 108, 14637–14642.
-
(2011)
Proceedings of the National Academy of Sciences, USA
, vol.108
, pp. 14637-14642
-
-
Sul, W.J.1
Cole, J.R.2
Jesus, E.3
Wang, Q.4
Farris, R.J.5
Fish, J.A.6
Tiedje, J.M.7
-
76
-
-
84914142313
-
Global diversity and geography of soil fungi
-
Tedersoo L, Bahram M, Polme S et al. (2014) Global diversity and geography of soil fungi. Science, 346, 1256688.
-
(2014)
Science
, vol.346
, pp. 1256688
-
-
Tedersoo, L.1
Bahram, M.2
Polme, S.3
-
77
-
-
77955173849
-
Direct and indirect effects of tree diversity drive soil microbial diversity in temperate deciduous forest
-
Thoms C, Gattinger A, Jacob M, Thomas FM, Gleixner G (2010) Direct and indirect effects of tree diversity drive soil microbial diversity in temperate deciduous forest. Soil Biology and Biochemistry, 42, 1558–1565.
-
(2010)
Soil Biology and Biochemistry
, vol.42
, pp. 1558-1565
-
-
Thoms, C.1
Gattinger, A.2
Jacob, M.3
Thomas, F.M.4
Gleixner, G.5
-
78
-
-
84888203902
-
Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants
-
Turner TR, Ramakrishnan K, Walshaw J et al. (2013) Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants. The ISME Journal, 7, 2248–2258.
-
(2013)
The ISME Journal
, vol.7
, pp. 2248-2258
-
-
Turner, T.R.1
Ramakrishnan, K.2
Walshaw, J.3
-
79
-
-
38049121467
-
Diversity of endophytic bacterial communities in poplar grown under field conditions
-
Ulrich K, Ulrich A, Ewald D (2008) Diversity of endophytic bacterial communities in poplar grown under field conditions. FEMS Microbiology Ecology, 63, 169–180.
-
(2008)
FEMS Microbiology Ecology
, vol.63
, pp. 169-180
-
-
Ulrich, K.1
Ulrich, A.2
Ewald, D.3
-
80
-
-
51549116035
-
Variations in the soil microbial community composition of a tropical montane forest ecosystem: does tree species matter?
-
Ushio M, Wagai R, Balser TC, Kitayama K (2008) Variations in the soil microbial community composition of a tropical montane forest ecosystem: does tree species matter? Soil Biology and Biochemistry, 40, 2699–2702.
-
(2008)
Soil Biology and Biochemistry
, vol.40
, pp. 2699-2702
-
-
Ushio, M.1
Wagai, R.2
Balser, T.C.3
Kitayama, K.4
-
81
-
-
37549024239
-
Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils
-
Wakelin SA, Macdonald LM, Rogers SL, Gregg AL, Bolger TP, Baldock JA (2008) Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils. Soil Biology and Biochemistry, 40, 803–813.
-
(2008)
Soil Biology and Biochemistry
, vol.40
, pp. 803-813
-
-
Wakelin, S.A.1
Macdonald, L.M.2
Rogers, S.L.3
Gregg, A.L.4
Bolger, T.P.5
Baldock, J.A.6
-
82
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang Q, Garrity GM, Tiedje JM, Cole JR (2007) Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Applied and Environmental Microbiology, 73, 5261–5267.
-
(2007)
Applied and Environmental Microbiology
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
83
-
-
0025680537
-
Analysis of macrobenthic and meiobenthic community structure in relation to pollution and disturbance in Hamilton Harbour, Bermuda
-
Warwick RM, Platt HM, Clarke KR, Agard J, Gobin J (1990) Analysis of macrobenthic and meiobenthic community structure in relation to pollution and disturbance in Hamilton Harbour, Bermuda. Journal of Experimental Marine Biology and Ecology, 138, 119–142.
-
(1990)
Journal of Experimental Marine Biology and Ecology
, vol.138
, pp. 119-142
-
-
Warwick, R.M.1
Platt, H.M.2
Clarke, K.R.3
Agard, J.4
Gobin, J.5
-
84
-
-
0033987792
-
Rhizosphere microbial community structure in relation to root location and plant iron nutritional status
-
Yang C-H, Crowley DE (2000) Rhizosphere microbial community structure in relation to root location and plant iron nutritional status. Applied and Environmental Microbiology, 66, 345–351.
-
(2000)
Applied and Environmental Microbiology
, vol.66
, pp. 345-351
-
-
Yang, C.-H.1
Crowley, D.E.2
-
85
-
-
84865059672
-
An approach for siting poplar energy production systems to increase productivity and associated ecosystem services
-
Zalesny RS, Donner DM, Coyle DR, Headlee WL (2012) An approach for siting poplar energy production systems to increase productivity and associated ecosystem services. Forest Ecology and Management, 284, 45–58.
-
(2012)
Forest Ecology and Management
, vol.284
, pp. 45-58
-
-
Zalesny, R.S.1
Donner, D.M.2
Coyle, D.R.3
Headlee, W.L.4
-
86
-
-
0042812120
-
Gemmatimonas aurantiaca gen. nov., sp. nov., a Gram-negative, aerobic, polyphosphate-accumulating micro-organism, the first cultured representative of the new bacterial phylum Gemmatimonadetes phyl. nov
-
Zhang H (2003) Gemmatimonas aurantiaca gen. nov., sp. nov., a Gram-negative, aerobic, polyphosphate-accumulating micro-organism, the first cultured representative of the new bacterial phylum Gemmatimonadetes phyl. nov. International Journal of Systematic and Evolutionary Microbiology, 53, 1155–1163.
-
(2003)
International Journal of Systematic and Evolutionary Microbiology
, vol.53
, pp. 1155-1163
-
-
Zhang, H.1
-
87
-
-
78650626151
-
Assessment of bioenergy potential on marginal land in China
-
Zhuang D, Jiang D, Liu L, Huang Y (2011) Assessment of bioenergy potential on marginal land in China. Renewable and Sustainable Energy Reviews, 15, 1050–1056.
-
(2011)
Renewable and Sustainable Energy Reviews
, vol.15
, pp. 1050-1056
-
-
Zhuang, D.1
Jiang, D.2
Liu, L.3
Huang, Y.4
|