Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types

Applied and Environmental Microbiology

Volumn 77, Issue 17, 2011, Pages 5934-5944

  Gottel, Neil R ^a   Castro, Hector F ^a,b   Kerley, Marilyn ^a   Yang, Zamin ^a   Pelletier, Dale A ^a   Podar, Mircea ^a,b   Karpinets, Tatiana ^a,b   Uberbacher, Ed ^a   Tuskan, Gerald A ^a,b   Vilgalys, Rytas ^c   Doktycz, Mitchel J ^a   Schadt, Christopher W ^a,b  

^a OAK RIDGE NATIONAL LABORATORY   (United States)

^b UNIVERSITY OF TENNESSEE   (United States)

^c DUKE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

16S RRNA; 454-PYROSEQUENCING; GAMMAPROTEOBACTERIA; HIER-ARCHICAL CLUSTERING; HOST PLANTS; IDEAL MODEL; MICROBIAL COMMUNITIES; NATURAL TREE; OPERATIONAL TAXONOMIC UNITS; POPULUS; POPULUS DELTOIDES; PRINCIPAL COORDINATES ANALYSIS; RELATIVE ABUNDANCE; RHIZOSPHERE BACTERIA; RRNA GENES; SOIL TYPES;

ASSOCIATION REACTIONS; BACTERIA; BACTERIOLOGY; FUNGI; GENES; GEOLOGIC MODELS; LANDFORMS; RNA;

SOILS;

BACTERIAL DNA; BACTERIAL RNA; FUNGAL DNA; FUNGAL RNA; RIBOSOME DNA; RNA 16S; RNA 18S;

BACTERIUM; CONIFEROUS TREE; FUNGUS; GREENHOUSE ECOSYSTEM; HIERARCHICAL SYSTEM; HOST PLANT; MICROBIAL COMMUNITY; PLANTATION; PRINCIPAL COMPONENT ANALYSIS; RHIZOSPHERE; SAMPLING; SOIL TYPE; SPECIES RICHNESS; UPLAND REGION;

ARTICLE; ASPEN; BACTERIUM; BIODIVERSITY; CHEMISTRY; CLASSIFICATION; DNA SEQUENCE; FUNGUS; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; PLANT ROOT; RHIZOSPHERE; RNA GENE; UNITED STATES;

BACTERIA; BIODIVERSITY; DNA, BACTERIAL; DNA, FUNGAL; DNA, RIBOSOMAL; FUNGI; GENES, RRNA; PLANT ROOTS; POPULUS; RHIZOSPHERE; RNA, BACTERIAL; RNA, FUNGAL; RNA, RIBOSOMAL, 16S; RNA, RIBOSOMAL, 18S; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY; TENNESSEE;

TENNESSEE; UNITED STATES;

ACIDOBACTERIA; ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); FUNGI; GAMMAPROTEOBACTERIA; OTUS; PEZIZOMYCOTINA; POPULUS; POPULUS DELTOIDES; PSEUDOMONAS;

EID: 80052769418     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.05255-11     Document Type: Article

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