-
3
-
-
55349101975
-
Common familial colorectal cancer linked to chromosome 7q31: A genome-wide analysis
-
D.W. Neklason, R.A. Kerber, D.B. Nilson, and et al. Common familial colorectal cancer linked to chromosome 7q31: a genome-wide analysis Cancer Res 68 2008 8993 8997
-
(2008)
Cancer Res
, vol.68
, pp. 8993-8997
-
-
Neklason, D.W.1
Kerber, R.A.2
Nilson, D.B.3
-
4
-
-
77957808382
-
Colorectal adenomas and cancer link to chromosome 13q22.1-13q31.3 in a large family with excess colorectal cancer
-
D.W. Neklason, T.M. Tuohy, J. Stevens, and et al. Colorectal adenomas and cancer link to chromosome 13q22.1-13q31.3 in a large family with excess colorectal cancer J Med Genet 47 2010 692 699
-
(2010)
J Med Genet
, vol.47
, pp. 692-699
-
-
Neklason, D.W.1
Tuohy, T.M.2
Stevens, J.3
-
5
-
-
84863005628
-
Common variation near CDKN1A, POLD3 and SHROOM2 influences colorectal cancer risk
-
M.G. Dunlop, S.E. Dobbins, S.M. Farrington, and et al. Common variation near CDKN1A, POLD3 and SHROOM2 influences colorectal cancer risk Nat Genet 44 2012 770 776
-
(2012)
Nat Genet
, vol.44
, pp. 770-776
-
-
Dunlop, M.G.1
Dobbins, S.E.2
Farrington, S.M.3
-
6
-
-
84875253066
-
Identification of genetic susceptibility loci for colorectal tumors in a genome-wide meta-analysis
-
U. Peters, S. Jiao, F.R. Schumacher, and et al. Identification of genetic susceptibility loci for colorectal tumors in a genome-wide meta-analysis Gastroenterology 144 2013 799 807.e724
-
(2013)
Gastroenterology
, vol.144
, pp. 799-807e724
-
-
Peters, U.1
Jiao, S.2
Schumacher, F.R.3
-
7
-
-
78049353079
-
Meta-analysis of three genome-wide association studies identifies susceptibility loci for colorectal cancer at 1q41, 3q26.2, 12q13.13 and 20q13.33
-
R.S. Houlston, J. Cheadle, S.E. Dobbins, and et al. Meta-analysis of three genome-wide association studies identifies susceptibility loci for colorectal cancer at 1q41, 3q26.2, 12q13.13 and 20q13.33 Nat Genet 42 2010 973 977
-
(2010)
Nat Genet
, vol.42
, pp. 973-977
-
-
Houlston, R.S.1
Cheadle, J.2
Dobbins, S.E.3
-
8
-
-
42649124305
-
Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21
-
A. Tenesa, S.M. Farrington, J.G. Prendergast, and et al. Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21 Nat Genet 40 2008 631 637
-
(2008)
Nat Genet
, vol.40
, pp. 631-637
-
-
Tenesa, A.1
Farrington, S.M.2
Prendergast, J.G.3
-
9
-
-
84863922124
-
Comprehensive molecular characterization of human colon and rectal cancer
-
Cancer Genome Atlas Network Comprehensive molecular characterization of human colon and rectal cancer Nature 487 2012 330 337
-
(2012)
Nature
, vol.487
, pp. 330-337
-
-
-
10
-
-
0031004175
-
Genetic instability in colorectal cancers
-
C. Lengauer, K.W. Kinzler, and B. Vogelstein Genetic instability in colorectal cancers Nature 386 1997 623 627
-
(1997)
Nature
, vol.386
, pp. 623-627
-
-
Lengauer, C.1
Kinzler, K.W.2
Vogelstein, B.3
-
11
-
-
0032546360
-
Mutations of mitotic checkpoint genes in human cancers
-
D.P. Cahill, C. Lengauer, J. Yu, and et al. Mutations of mitotic checkpoint genes in human cancers Nature 392 1998 300 303
-
(1998)
Nature
, vol.392
, pp. 300-303
-
-
Cahill, D.P.1
Lengauer, C.2
Yu, J.3
-
12
-
-
84874362586
-
Replication stress links structural and numerical cancer chromosomal instability
-
R.A. Burrell, S.E. McClelland, D. Endesfelder, and et al. Replication stress links structural and numerical cancer chromosomal instability Nature 494 2013 492 496
-
(2013)
Nature
, vol.494
, pp. 492-496
-
-
Burrell, R.A.1
McClelland, S.E.2
Endesfelder, D.3
-
13
-
-
78650884008
-
Homozygous BUB1B mutation and susceptibility to gastrointestinal neoplasia
-
T. Rio Frio, J. Lavoie, N. Hamel, and et al. Homozygous BUB1B mutation and susceptibility to gastrointestinal neoplasia N Engl J Med 363 2010 2628 2637
-
(2010)
N Engl J Med
, vol.363
, pp. 2628-2637
-
-
Rio Frio, T.1
Lavoie, J.2
Hamel, N.3
-
14
-
-
84899618905
-
Germline variation in cancer-susceptibility genes in a healthy, ancestrally diverse cohort: Implications for individual genome sequencing
-
D.L. Bodian, J.N. McCutcheon, P. Kothiyal, and et al. Germline variation in cancer-susceptibility genes in a healthy, ancestrally diverse cohort: implications for individual genome sequencing PLoS One 9 2014 e94554
-
(2014)
PLoS One
, vol.9
, pp. e94554
-
-
Bodian, D.L.1
McCutcheon, J.N.2
Kothiyal, P.3
-
15
-
-
77951640946
-
A method and server for predicting damaging missense mutations
-
I.A. Adzhubei, S. Schmidt, L. Peshkin, and et al. A method and server for predicting damaging missense mutations Nat Methods 7 2010 248 249
-
(2010)
Nat Methods
, vol.7
, pp. 248-249
-
-
Adzhubei, I.A.1
Schmidt, S.2
Peshkin, L.3
-
16
-
-
74749084156
-
UV-induced association of the CSB remodeling protein with chromatin requires ATP-dependent relief of N- terminal autorepression
-
R.J. Lake, A. Geyko, G. Hemashettar, and et al. UV-induced association of the CSB remodeling protein with chromatin requires ATP-dependent relief of N- terminal autorepression Mol Cell 37 2010 235 246
-
(2010)
Mol Cell
, vol.37
, pp. 235-246
-
-
Lake, R.J.1
Geyko, A.2
Hemashettar, G.3
-
17
-
-
68149165614
-
Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
-
P. Kumar, S. Henikoff, and P.C. Ng Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm Nat Protoc 4 2009 1073 1081
-
(2009)
Nat Protoc
, vol.4
, pp. 1073-1081
-
-
Kumar, P.1
Henikoff, S.2
Ng, P.C.3
-
18
-
-
80053189298
-
Predicting the functional impact of protein mutations: Application to cancer genomics
-
B. Reva, Y. Antipin, and C. Sander Predicting the functional impact of protein mutations: application to cancer genomics Nucleic Acids Res 39 2011 e118
-
(2011)
Nucleic Acids Res
, vol.39
, pp. e118
-
-
Reva, B.1
Antipin, Y.2
Sander, C.3
-
19
-
-
0025988295
-
DNA double-strand breaks measured in individual cells subjected to gel electrophoresis
-
P.L. Olive, D. Wlodek, and J.P. Banath DNA double-strand breaks measured in individual cells subjected to gel electrophoresis Cancer Res 51 1991 4671
-
(1991)
Cancer Res
, vol.51
, pp. 4671
-
-
Olive, P.L.1
Wlodek, D.2
Banath, J.P.3
-
20
-
-
67651119997
-
A genome-wide siRNA screen reveals diverse cellular processes and pathways that mediate genome stability
-
R.D. Paulsen, D.V. Soni, R. Wollman, and et al. A genome-wide siRNA screen reveals diverse cellular processes and pathways that mediate genome stability Mol Cell 35 2009 228 239
-
(2009)
Mol Cell
, vol.35
, pp. 228-239
-
-
Paulsen, R.D.1
Soni, D.V.2
Wollman, R.3
-
21
-
-
84867301515
-
Predicting the functional effect of amino acid substitutions and indels
-
Y. Choi, G.E. Sims, S. Murphy, and et al. Predicting the functional effect of amino acid substitutions and indels PLoS One 7 2012 e46688
-
(2012)
PLoS One
, vol.7
, pp. e46688
-
-
Choi, Y.1
Sims, G.E.2
Murphy, S.3
-
22
-
-
0035880025
-
Unwinding the molecular basis of the Werner syndrome
-
J. Shen, and L.A. Loeb Unwinding the molecular basis of the Werner syndrome Mech Ageing Dev 122 2001 921 944
-
(2001)
Mech Ageing Dev
, vol.122
, pp. 921-944
-
-
Shen, J.1
Loeb, L.A.2
-
23
-
-
0034650238
-
WRN helicase expression in Werner syndrome cell lines
-
M.J. Moser, A.S. Kamath-Loeb, J.E. Jacob, and et al. WRN helicase expression in Werner syndrome cell lines Nucleic Acids Res 28 2000 648 654
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 648-654
-
-
Moser, M.J.1
Kamath-Loeb, A.S.2
Jacob, J.E.3
-
24
-
-
84876875641
-
ATP-dependent chromatin remodeling by Cockayne syndrome protein B and NAP1-like histone chaperones is required for efficient transcription-coupled DNA repair
-
I. Cho, P.F. Tsai, R.J. Lake, and et al. ATP-dependent chromatin remodeling by Cockayne syndrome protein B and NAP1-like histone chaperones is required for efficient transcription-coupled DNA repair PLoS Genet 9 2013 e1003407
-
(2013)
PLoS Genet
, vol.9
, pp. e1003407
-
-
Cho, I.1
Tsai, P.F.2
Lake, R.J.3
-
25
-
-
78249244159
-
The ERCC6 gene and age-related macular degeneration
-
D.C. Baas, D.D. Despriet, T.G. Gorgels, and et al. The ERCC6 gene and age-related macular degeneration PLoS One 5 2010 e13786
-
(2010)
PLoS One
, vol.5
, pp. e13786
-
-
Baas, D.C.1
Despriet, D.D.2
Gorgels, T.G.3
-
26
-
-
84862161278
-
Non-specific chemical inhibition of the Fanconi anemia pathway sensitizes cancer cells to cisplatin
-
C. Jacquemont, J.A. Simon, A.D. D'Andrea, and et al. Non-specific chemical inhibition of the Fanconi anemia pathway sensitizes cancer cells to cisplatin Mol Cancer 11 2012 26
-
(2012)
Mol Cancer
, vol.11
, pp. 26
-
-
Jacquemont, C.1
Simon, J.A.2
D'Andrea, A.D.3
-
27
-
-
84873096362
-
Germline mutations affecting the proofreading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas
-
C. Palles, J.B. Cazier, K.M. Howarth, and et al. Germline mutations affecting the proofreading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas Nat Genet 45 2013 136 144
-
(2013)
Nat Genet
, vol.45
, pp. 136-144
-
-
Palles, C.1
Cazier, J.B.2
Howarth, K.M.3
-
28
-
-
84892743776
-
Break-induced replication repair of damaged forks induces genomic duplications in human cells
-
L. Costantino, S.K. Sotiriou, J.K. Rantala, and et al. Break-induced replication repair of damaged forks induces genomic duplications in human cells Science 343 2014 88 91
-
(2014)
Science
, vol.343
, pp. 88-91
-
-
Costantino, L.1
Sotiriou, S.K.2
Rantala, J.K.3
-
29
-
-
84938864161
-
Germline mutations in FAN1 cause hereditary colorectal cancer by impairing DNA repair
-
N. Segui, L.B. Mina, C. Lazaro, and et al. Germline mutations in FAN1 cause hereditary colorectal cancer by impairing DNA repair Gastroenterology 149 2015 563 566
-
(2015)
Gastroenterology
, vol.149
, pp. 563-566
-
-
Segui, N.1
Mina, L.B.2
Lazaro, C.3
-
30
-
-
84901686903
-
Large-scale genetic study in East Asians identifies six new loci associated with colorectal cancer risk
-
B. Zhang, W.H. Jia, K. Matsuda, and et al. Large-scale genetic study in East Asians identifies six new loci associated with colorectal cancer risk Nat Genet 46 2014 533 542
-
(2014)
Nat Genet
, vol.46
, pp. 533-542
-
-
Zhang, B.1
Jia, W.H.2
Matsuda, K.3
-
31
-
-
0034972978
-
Germline mutations of the gene encoding bone morphogenetic protein receptor 1A in juvenile polyposis
-
J.R. Howe, J.L. Bair, M.G. Sayed, and et al. Germline mutations of the gene encoding bone morphogenetic protein receptor 1A in juvenile polyposis Nat Genet 28 2001 184 187
-
(2001)
Nat Genet
, vol.28
, pp. 184-187
-
-
Howe, J.R.1
Bair, J.L.2
Sayed, M.G.3
-
32
-
-
79959851441
-
Multiple common susceptibility variants near BMP pathway loci GREM1, BMP4, and BMP2 explain part of the missing heritability of colorectal cancer
-
I.P. Tomlinson, L.G. Carvajal-Carmona, S.E. Dobbins, and et al. Multiple common susceptibility variants near BMP pathway loci GREM1, BMP4, and BMP2 explain part of the missing heritability of colorectal cancer PLoS Genet 7 2011 e1002105
-
(2011)
PLoS Genet
, vol.7
, pp. e1002105
-
-
Tomlinson, I.P.1
Carvajal-Carmona, L.G.2
Dobbins, S.E.3
-
33
-
-
36049024402
-
Accurate homologous recombination is a prominent double-strand break repair pathway in mammalian chromosomes and is modulated by mismatch repair protein Msh2
-
J.A. Smith, L.A. Bannister, V. Bhattacharjee, and et al. Accurate homologous recombination is a prominent double-strand break repair pathway in mammalian chromosomes and is modulated by mismatch repair protein Msh2 Mol Cell Biol 27 2007 7816 7827
-
(2007)
Mol Cell Biol
, vol.27
, pp. 7816-7827
-
-
Smith, J.A.1
Bannister, L.A.2
Bhattacharjee, V.3
-
34
-
-
35348946359
-
Double-strand breaks induce homologous recombinational repair of interstrand cross-links via cooperation of MSH2, ERCC1-XPF, REV3, and the Fanconi anemia pathway
-
N. Zhang, X. Liu, L. Li, and et al. Double-strand breaks induce homologous recombinational repair of interstrand cross-links via cooperation of MSH2, ERCC1-XPF, REV3, and the Fanconi anemia pathway DNA Repair (Amst) 6 2007 1670 1678
-
(2007)
DNA Repair (Amst)
, vol.6
, pp. 1670-1678
-
-
Zhang, N.1
Liu, X.2
Li, L.3
-
35
-
-
49849105614
-
Micronuclei frequency in peripheral blood lymphocytes of cancer patients: A meta-analysis
-
G. Iarmarcovai, M. Ceppi, A. Botta, and et al. Micronuclei frequency in peripheral blood lymphocytes of cancer patients: a meta-analysis Mutat Res 659 2008 274 283
-
(2008)
Mutat Res
, vol.659
, pp. 274-283
-
-
Iarmarcovai, G.1
Ceppi, M.2
Botta, A.3
-
36
-
-
78650634202
-
Micronuclei frequency in peripheral blood lymphocytes and cancer risk: Evidence from human studies
-
S. Bonassi, R. El-Zein, C. Bolognesi, and et al. Micronuclei frequency in peripheral blood lymphocytes and cancer risk: evidence from human studies Mutagenesis 26 2011 93 100
-
(2011)
Mutagenesis
, vol.26
, pp. 93-100
-
-
Bonassi, S.1
El-Zein, R.2
Bolognesi, C.3
-
37
-
-
64049091164
-
Micronucleus analysis in patients with colorectal adenocarcinoma and colorectal polyps
-
A. Karaman, D.N. Binici, M.E. Kabalar, and et al. Micronucleus analysis in patients with colorectal adenocarcinoma and colorectal polyps World J Gastroenterol 14 2008 6835 6839
-
(2008)
World J Gastroenterol
, vol.14
, pp. 6835-6839
-
-
Karaman, A.1
Binici, D.N.2
Kabalar, M.E.3
-
38
-
-
84898917602
-
Micronucleus frequency in human peripheral blood lymphocytes as a biomarker for the early detection of colorectal cancer risk
-
F. Maffei, J.M. Zolezzi Moraga, S. Angelini, and et al. Micronucleus frequency in human peripheral blood lymphocytes as a biomarker for the early detection of colorectal cancer risk Mutagenesis 29 2014 221 225
-
(2014)
Mutagenesis
, vol.29
, pp. 221-225
-
-
Maffei, F.1
Zolezzi Moraga, J.M.2
Angelini, S.3
-
39
-
-
84899618905
-
Germline variation in cancer-susceptibility genes in a healthy, ancestrally diverse cohort: Implications for individual genome sequencing
-
D.L. Bodian, J.N. McCutcheon, P. Kothiyal, and et al. Germline variation in cancer-susceptibility genes in a healthy, ancestrally diverse cohort: implications for individual genome sequencing PLoS One 9 2014 e94554
-
(2014)
PLoS One
, vol.9
, pp. e94554
-
-
Bodian, D.L.1
McCutcheon, J.N.2
Kothiyal, P.3
-
40
-
-
79960405019
-
The variant call format and VCFtools
-
P. Danecek, A. Auton, G. Abecasis, and et al. The variant call format and VCFtools Bioinformatics 27 2011 2156 2158
-
(2011)
Bioinformatics
, vol.27
, pp. 2156-2158
-
-
Danecek, P.1
Auton, A.2
Abecasis, G.3
-
41
-
-
77956534324
-
ANNOVAR: Functional annotation of genetic variants from high-throughput sequencing data
-
K. Wang, M. Li, and H. Hakonarson ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data Nucleic Acids Res 38 2010 e164
-
(2010)
Nucleic Acids Res
, vol.38
, pp. e164
-
-
Wang, K.1
Li, M.2
Hakonarson, H.3
-
42
-
-
84891767394
-
RefSeq: An update on mammalian reference sequences
-
K.D. Pruitt, G.R. Brown, S.M. Hiatt, and et al. RefSeq: an update on mammalian reference sequences Nucleic Acids Res 42 2014 D756 D763
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D756-D763
-
-
Pruitt, K.D.1
Brown, G.R.2
Hiatt, S.M.3
-
43
-
-
84866002291
-
The cBio cancer genomics portal: An open platform for exploring multidimensional cancer genomics data
-
E. Cerami, J. Gao, U. Dogrusoz, and et al. The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data Cancer Discov 2 2012 401 404
-
(2012)
Cancer Discov
, vol.2
, pp. 401-404
-
-
Cerami, E.1
Gao, J.2
Dogrusoz, U.3
-
44
-
-
46449122015
-
Generation of Epstein-Barr virus (EBV)-immortalized B cell lines
-
G. Tosato, and J.L. Cohen Generation of Epstein-Barr virus (EBV)-immortalized B cell lines Curr Protoc Immunol 76 2007 7.22.1 7.22.4
-
(2007)
Curr Protoc Immunol
, vol.76
, pp. 7221-7224
-
-
Tosato, G.1
Cohen, J.L.2
-
45
-
-
84903386152
-
BioAssemblyModeler (BAM): User-friendly homology modeling of protein homo- and heterooligomers
-
M.V. Shapovalov, Q. Wang, Q. Xu, and et al. BioAssemblyModeler (BAM): user-friendly homology modeling of protein homo- and heterooligomers PLoS One 9 2014 e98309
-
(2014)
PLoS One
, vol.9
, pp. e98309
-
-
Shapovalov, M.V.1
Wang, Q.2
Xu, Q.3
-
47
-
-
84876875641
-
ATP-dependent chromatin remodeling by Cockayne syndrome protein B and NAP1-like histone chaperones is required for efficient transcription-coupled DNA repair
-
I. Cho, P.F. Tsai, R.J. Lake, and et al. ATP-dependent chromatin remodeling by Cockayne syndrome protein B and NAP1-like histone chaperones is required for efficient transcription-coupled DNA repair PLoS Genet 9 2013 e1003407
-
(2013)
PLoS Genet
, vol.9
, pp. e1003407
-
-
Cho, I.1
Tsai, P.F.2
Lake, R.J.3
-
48
-
-
16244366026
-
Index for rating diagnostic tests
-
W.J. Youden Index for rating diagnostic tests Cancer 3 1950 32 35
-
(1950)
Cancer
, vol.3
, pp. 32-35
-
-
Youden, W.J.1
|