-
1
-
-
84855297335
-
A decade of 3C technologies: insights into nuclear organization
-
de Wit E., de Laat W. A decade of 3C technologies: insights into nuclear organization. Genes Dev 2012, 26:11-24.
-
(2012)
Genes Dev
, vol.26
, pp. 11-24
-
-
de Wit, E.1
de Laat, W.2
-
2
-
-
84861095603
-
Topological domains in mammalian genomes identified by analysis of chromatin interactions
-
Dixon J.R., Selvaraj S., Yue F., Kim A., Li Y., Shen Y., Hu M., Liu J.S., Ren B. Topological domains in mammalian genomes identified by analysis of chromatin interactions. Nature 2012, 485:376-380.
-
(2012)
Nature
, vol.485
, pp. 376-380
-
-
Dixon, J.R.1
Selvaraj, S.2
Yue, F.3
Kim, A.4
Li, Y.5
Shen, Y.6
Hu, M.7
Liu, J.S.8
Ren, B.9
-
3
-
-
84861100147
-
Spatial partitioning of the regulatory landscape of the X-inactivation centre
-
Nora E.P., Lajoie B.R., Schulz E.G., Giorgetti L., Okamoto I., Servant N., Piolot T., van Berkum N.L., Meisig J., Sedat J., et al. Spatial partitioning of the regulatory landscape of the X-inactivation centre. Nature 2012, 485:381-385.
-
(2012)
Nature
, vol.485
, pp. 381-385
-
-
Nora, E.P.1
Lajoie, B.R.2
Schulz, E.G.3
Giorgetti, L.4
Okamoto, I.5
Servant, N.6
Piolot, T.7
van Berkum, N.L.8
Meisig, J.9
Sedat, J.10
-
4
-
-
84943358862
-
Structural and functional diversity of topologically associating domains
-
Dekker J., Heard E. Structural and functional diversity of topologically associating domains. FEBS Lett 2015, 589:2877-2884.
-
(2015)
FEBS Lett
, vol.589
, pp. 2877-2884
-
-
Dekker, J.1
Heard, E.2
-
5
-
-
84856747483
-
Three-dimensional folding and functional organization principles of the Drosophila genome
-
Sexton T., Yaffe E., Kenigsberg E., Bantignies F., Leblanc B., Hoichman M., Parrinello H., Tanay A., Cavalli G. Three-dimensional folding and functional organization principles of the Drosophila genome. Cell 2012, 148:458-472.
-
(2012)
Cell
, vol.148
, pp. 458-472
-
-
Sexton, T.1
Yaffe, E.2
Kenigsberg, E.3
Bantignies, F.4
Leblanc, B.5
Hoichman, M.6
Parrinello, H.7
Tanay, A.8
Cavalli, G.9
-
6
-
-
84892474589
-
Polycomb silencing: from linear chromatin domains to 3D chromosome folding
-
Cheutin T., Cavalli G. Polycomb silencing: from linear chromatin domains to 3D chromosome folding. Curr Opin Genet Dev 2014, 25C:30-37.
-
(2014)
Curr Opin Genet Dev
, vol.25C
, pp. 30-37
-
-
Cheutin, T.1
Cavalli, G.2
-
7
-
-
77956416028
-
Gene positioning
-
a000588
-
Ferrai C., de Castro I.J., Lavitas L., Chotalia M., Pombo A. Gene positioning. Cold Spring Harbor Perspect Biol 2010, 2. a000588.
-
(2010)
Cold Spring Harbor Perspect Biol
, vol.2
-
-
Ferrai, C.1
de Castro, I.J.2
Lavitas, L.3
Chotalia, M.4
Pombo, A.5
-
8
-
-
85045484695
-
A morphological distinction between neurones of the male and female, and the behaviour of the nucleolar satellite during accelerated nucleoprotein synthesis
-
Barr M.L., Bertram E.G. A morphological distinction between neurones of the male and female, and the behaviour of the nucleolar satellite during accelerated nucleoprotein synthesis. Nature 1949, 163:676.
-
(1949)
Nature
, vol.163
, pp. 676
-
-
Barr, M.L.1
Bertram, E.G.2
-
9
-
-
43149100549
-
The facultative heterochromatin of the inactive X chromosome has a distinctive condensed ultrastructure
-
Rego A., Sinclair P.B., Tao W., Kireev I., Belmont A.S. The facultative heterochromatin of the inactive X chromosome has a distinctive condensed ultrastructure. J Cell Sci 2008, 121:1119-1127.
-
(2008)
J Cell Sci
, vol.121
, pp. 1119-1127
-
-
Rego, A.1
Sinclair, P.B.2
Tao, W.3
Kireev, I.4
Belmont, A.S.5
-
10
-
-
84938412430
-
The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation
-
Yang F., Deng X., Ma W., Berletch J.B., Rabaia N., Wei G., Moore J.M., Filippova G.N., Xu J., Liu Y., et al. The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation. Genome Biol 2015, 16:52.
-
(2015)
Genome Biol
, vol.16
, pp. 52
-
-
Yang, F.1
Deng, X.2
Ma, W.3
Berletch, J.B.4
Rabaia, N.5
Wei, G.6
Moore, J.M.7
Filippova, G.N.8
Xu, J.9
Liu, Y.10
-
11
-
-
84900824181
-
Three-dimensional super resolution microscopy of the inactive X chromosome territory reveals a collapse of its active nuclear compartment harboring distinct Xist RNA foci
-
Smeets D., Markaki Y., Schmid V.J., Kraus F., Tattermusch A., Cerase A., Sterr M., Fiedler S., Demmerle J., Popken J., et al. Three-dimensional super resolution microscopy of the inactive X chromosome territory reveals a collapse of its active nuclear compartment harboring distinct Xist RNA foci. Epigenet Chromatin 2014, 7:8.
-
(2014)
Epigenet Chromatin
, vol.7
, pp. 8
-
-
Smeets, D.1
Markaki, Y.2
Schmid, V.J.3
Kraus, F.4
Tattermusch, A.5
Cerase, A.6
Sterr, M.7
Fiedler, S.8
Demmerle, J.9
Popken, J.10
-
12
-
-
33746076412
-
A novel role for Xist RNA in the formation of a repressive nuclear compartment into which genes are recruited when silenced
-
Chaumeil J., Le Baccon P., Wutz A., Heard E. A novel role for Xist RNA in the formation of a repressive nuclear compartment into which genes are recruited when silenced. Genes Dev 2006, 20:2223-2237.
-
(2006)
Genes Dev
, vol.20
, pp. 2223-2237
-
-
Chaumeil, J.1
Le Baccon, P.2
Wutz, A.3
Heard, E.4
-
13
-
-
79959952919
-
The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA
-
Splinter E., de Wit E., Nora E.P., Klous P., van de Werken H.J., Zhu Y., Kaaij L.J., van Ijcken W., Gribnau J., Heard E., et al. The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA. Genes Dev 2011, 25:1371-1383.
-
(2011)
Genes Dev
, vol.25
, pp. 1371-1383
-
-
Splinter, E.1
de Wit, E.2
Nora, E.P.3
Klous, P.4
van de Werken, H.J.5
Zhu, Y.6
Kaaij, L.J.7
van Ijcken, W.8
Gribnau, J.9
Heard, E.10
-
14
-
-
84939483651
-
Bipartite structure of the inactive mouse X chromosome
-
Deng X., Ma W., Ramani V., Hill A., Yang F., Ay F., Berletch J.B., Blau C.A., Shendure J., Duan Z., et al. Bipartite structure of the inactive mouse X chromosome. Genome Biol 2015, 16:152.
-
(2015)
Genome Biol
, vol.16
, pp. 152
-
-
Deng, X.1
Ma, W.2
Ramani, V.3
Hill, A.4
Yang, F.5
Ay, F.6
Berletch, J.B.7
Blau, C.A.8
Shendure, J.9
Duan, Z.10
-
15
-
-
84919949716
-
A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping
-
Rao S.S., Huntley M.H., Durand N.C., Stamenova E.K., Bochkov I.D., Robinson J.T., Sanborn A.L., Machol I., Omer A.D., Lander E.S., et al. A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping. Cell 2014, 159:1665-1680.
-
(2014)
Cell
, vol.159
, pp. 1665-1680
-
-
Rao, S.S.1
Huntley, M.H.2
Durand, N.C.3
Stamenova, E.K.4
Bochkov, I.D.5
Robinson, J.T.6
Sanborn, A.L.7
Machol, I.8
Omer, A.D.9
Lander, E.S.10
-
16
-
-
84937960975
-
A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation
-
Minajigi A., Froberg J.E., Wei C., Sunwoo H., Kesner B., Colognori D., Lessing D., Payer B., Boukhali M., Haas W., et al. A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation. Science 2015, 349.
-
(2015)
Science
, pp. 349
-
-
Minajigi, A.1
Froberg, J.E.2
Wei, C.3
Sunwoo, H.4
Kesner, B.5
Colognori, D.6
Lessing, D.7
Payer, B.8
Boukhali, M.9
Haas, W.10
-
17
-
-
48949102889
-
DXZ4 chromatin adopts an opposing conformation to that of the surrounding chromosome and acquires a novel inactive X-specific role involving CTCF and antisense transcripts
-
Chadwick B.P. DXZ4 chromatin adopts an opposing conformation to that of the surrounding chromosome and acquires a novel inactive X-specific role involving CTCF and antisense transcripts. Genome Res 2008, 18:1259-1269.
-
(2008)
Genome Res
, vol.18
, pp. 1259-1269
-
-
Chadwick, B.P.1
-
18
-
-
84867116639
-
The macrosatellite DXZ4 mediates CTCF-dependent long-range intrachromosomal interactions on the human inactive X chromosome
-
Horakova A.H., Moseley S.C., McLaughlin C.R., Tremblay D.C., Chadwick B.P. The macrosatellite DXZ4 mediates CTCF-dependent long-range intrachromosomal interactions on the human inactive X chromosome. Hum Mol Genet 2012, 21:4367-4377.
-
(2012)
Hum Mol Genet
, vol.21
, pp. 4367-4377
-
-
Horakova, A.H.1
Moseley, S.C.2
McLaughlin, C.R.3
Tremblay, D.C.4
Chadwick, B.P.5
-
19
-
-
81155159786
-
Origin and evolution of the long non-coding genes in the X-inactivation center
-
Romito A., Rougeulle C. Origin and evolution of the long non-coding genes in the X-inactivation center. Biochimie 2011, 93:1935-1942.
-
(2011)
Biochimie
, vol.93
, pp. 1935-1942
-
-
Romito, A.1
Rougeulle, C.2
-
20
-
-
84900297485
-
Predictive polymer modeling reveals coupled fluctuations in chromosome conformation and transcription
-
Giorgetti L., Galupa R., Nora E.P., Piolot T., Lam F., Dekker J., Tiana G., Heard E. Predictive polymer modeling reveals coupled fluctuations in chromosome conformation and transcription. Cell 2014, 157:950-963.
-
(2014)
Cell
, vol.157
, pp. 950-963
-
-
Giorgetti, L.1
Galupa, R.2
Nora, E.P.3
Piolot, T.4
Lam, F.5
Dekker, J.6
Tiana, G.7
Heard, E.8
-
21
-
-
84930613787
-
X-chromosome inactivation: new insights into cis and trans regulation
-
Galupa R., Heard E. X-chromosome inactivation: new insights into cis and trans regulation. Curr Opin Genet Dev 2015, 31:57-66.
-
(2015)
Curr Opin Genet Dev
, vol.31
, pp. 57-66
-
-
Galupa, R.1
Heard, E.2
-
22
-
-
84890549512
-
High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation
-
Simon M.D., Pinter S.F., Fang R., Sarma K., Rutenberg-Schoenberg M., Bowman S.K., Kesner B.A., Maier V.K., Kingston R.E., Lee J.T. High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation. Nature 2013, 504:465-469.
-
(2013)
Nature
, vol.504
, pp. 465-469
-
-
Simon, M.D.1
Pinter, S.F.2
Fang, R.3
Sarma, K.4
Rutenberg-Schoenberg, M.5
Bowman, S.K.6
Kesner, B.A.7
Maier, V.K.8
Kingston, R.E.9
Lee, J.T.10
-
23
-
-
84879642373
-
The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome
-
1237973
-
Engreitz J.M., Pandya-Jones A., McDonel P., Shishkin A., Sirokman K., Surka C., Kadri S., Xing J., Goren A., Lander E.S., et al. The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome. Science 2013, 341. 1237973.
-
(2013)
Science
, vol.341
-
-
Engreitz, J.M.1
Pandya-Jones, A.2
McDonel, P.3
Shishkin, A.4
Sirokman, K.5
Surka, C.6
Kadri, S.7
Xing, J.8
Goren, A.9
Lander, E.S.10
-
24
-
-
84939505122
-
Dynamics of gene silencing during X inactivation using allele-specific RNA-seq
-
Marks H., Kerstens H.H., Barakat T.S., Splinter E., Dirks R.A., van Mierlo G., Joshi O., Wang S.Y., Babak T., Albers C.A., et al. Dynamics of gene silencing during X inactivation using allele-specific RNA-seq. Genome Biol 2015, 16:149.
-
(2015)
Genome Biol
, vol.16
, pp. 149
-
-
Marks, H.1
Kerstens, H.H.2
Barakat, T.S.3
Splinter, E.4
Dirks, R.A.5
van Mierlo, G.6
Joshi, O.7
Wang, S.Y.8
Babak, T.9
Albers, C.A.10
-
25
-
-
0032805149
-
Conditional deletion of Xist disrupts histone macroH2A localization but not maintenance of X inactivation
-
Csankovszki G., Panning B., Bates B., Pehrson J.R., Jaenisch R. Conditional deletion of Xist disrupts histone macroH2A localization but not maintenance of X inactivation. Nat Genet 1999, 22:323-324.
-
(1999)
Nat Genet
, vol.22
, pp. 323-324
-
-
Csankovszki, G.1
Panning, B.2
Bates, B.3
Pehrson, J.R.4
Jaenisch, R.5
-
26
-
-
84929325401
-
The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3
-
McHugh C.A., Chen C.K., Chow A., Surka C.F., Tran C., McDonel P., Pandya-Jones A., Blanco M., Burghard C., Moradian A., et al. The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3. Nature 2015, 521:232-236.
-
(2015)
Nature
, vol.521
, pp. 232-236
-
-
McHugh, C.A.1
Chen, C.K.2
Chow, A.3
Surka, C.F.4
Tran, C.5
McDonel, P.6
Pandya-Jones, A.7
Blanco, M.8
Burghard, C.9
Moradian, A.10
-
27
-
-
84929355793
-
Systematic discovery of Xist RNA binding proteins
-
Chu C., Zhang Q.C., da Rocha S.T., Flynn R.A., Bharadwaj M., Calabrese J.M., Magnuson T., Heard E., Chang H.Y. Systematic discovery of Xist RNA binding proteins. Cell 2015, 161:404-416.
-
(2015)
Cell
, vol.161
, pp. 404-416
-
-
Chu, C.1
Zhang, Q.C.2
da Rocha, S.T.3
Flynn, R.A.4
Bharadwaj, M.5
Calabrese, J.M.6
Magnuson, T.7
Heard, E.8
Chang, H.Y.9
-
28
-
-
77956607961
-
The matrix protein hnRNP U is required for chromosomal localization of Xist RNA
-
Hasegawa Y., Brockdorff N., Kawano S., Tsutui K., Nakagawa S. The matrix protein hnRNP U is required for chromosomal localization of Xist RNA. Dev Cell 2010, 19:469-476.
-
(2010)
Dev Cell
, vol.19
, pp. 469-476
-
-
Hasegawa, Y.1
Brockdorff, N.2
Kawano, S.3
Tsutui, K.4
Nakagawa, S.5
-
29
-
-
84873302358
-
LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation
-
Solovei I., Wang A.S., Thanisch K., Schmidt C.S., Krebs S., Zwerger M., Cohen T.V., Devys D., Foisner R., Peichl L., et al. LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation. Cell 2013, 152:584-598.
-
(2013)
Cell
, vol.152
, pp. 584-598
-
-
Solovei, I.1
Wang, A.S.2
Thanisch, K.3
Schmidt, C.S.4
Krebs, S.5
Zwerger, M.6
Cohen, T.V.7
Devys, D.8
Foisner, R.9
Peichl, L.10
-
30
-
-
84877825124
-
Building silent compartments at the nuclear periphery: a recurrent theme
-
Meister P., Taddei A. Building silent compartments at the nuclear periphery: a recurrent theme. Curr Opin Genet Dev 2013, 23:96-103.
-
(2013)
Curr Opin Genet Dev
, vol.23
, pp. 96-103
-
-
Meister, P.1
Taddei, A.2
-
31
-
-
33644870525
-
Nuclear pore components are involved in the transcriptional regulation of dosage compensation in Drosophila
-
Mendjan S., Taipale M., Kind J., Holz H., Gebhardt P., Schelder M., Vermeulen M., Buscaino A., Duncan K., Mueller J., et al. Nuclear pore components are involved in the transcriptional regulation of dosage compensation in Drosophila. Mol Cell 2006, 21:811-823.
-
(2006)
Mol Cell
, vol.21
, pp. 811-823
-
-
Mendjan, S.1
Taipale, M.2
Kind, J.3
Holz, H.4
Gebhardt, P.5
Schelder, M.6
Vermeulen, M.7
Buscaino, A.8
Duncan, K.9
Mueller, J.10
-
32
-
-
0033988212
-
The Drosophila MSL complex acetylates histone H4 at lysine 16, a chromatin modification linked to dosage compensation
-
Smith E.R., Pannuti A., Gu W., Steurnagel A., Cook R.G., Allis C.D., Lucchesi J.C. The Drosophila MSL complex acetylates histone H4 at lysine 16, a chromatin modification linked to dosage compensation. Mol Cell Biol 2000, 20:312-318.
-
(2000)
Mol Cell Biol
, vol.20
, pp. 312-318
-
-
Smith, E.R.1
Pannuti, A.2
Gu, W.3
Steurnagel, A.4
Cook, R.G.5
Allis, C.D.6
Lucchesi, J.C.7
-
34
-
-
49549113199
-
A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome
-
Alekseyenko A.A., Peng S., Larschan E., Gorchakov A.A., Lee O.K., Kharchenko P., McGrath S.D., Wang C.I., Mardis E.R., Park P.J., et al. A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome. Cell 2008, 134:599-609.
-
(2008)
Cell
, vol.134
, pp. 599-609
-
-
Alekseyenko, A.A.1
Peng, S.2
Larschan, E.3
Gorchakov, A.A.4
Lee, O.K.5
Kharchenko, P.6
McGrath, S.D.7
Wang, C.I.8
Mardis, E.R.9
Park, P.J.10
-
35
-
-
58149165026
-
The chromosomal high-affinity binding sites for the Drosophila dosage compensation complex
-
e1000302
-
Straub T., Grimaud C., Gilfillan G.D., Mitterweger A., Becker P.B. The chromosomal high-affinity binding sites for the Drosophila dosage compensation complex. PLoS Genet 2008, 4. e1000302.
-
(2008)
PLoS Genet
, vol.4
-
-
Straub, T.1
Grimaud, C.2
Gilfillan, G.D.3
Mitterweger, A.4
Becker, P.B.5
-
36
-
-
84914169336
-
Structural basis of X chromosome DNA recognition by the MSL2 CXC domain during Drosophila dosage compensation
-
Zheng S., Villa R., Wang J., Feng Y., Becker P.B., Ye K. Structural basis of X chromosome DNA recognition by the MSL2 CXC domain during Drosophila dosage compensation. Genes Dev 2014, 28:2652-2662.
-
(2014)
Genes Dev
, vol.28
, pp. 2652-2662
-
-
Zheng, S.1
Villa, R.2
Wang, J.3
Feng, Y.4
Becker, P.B.5
Ye, K.6
-
37
-
-
84880445591
-
The CLAMP protein links the MSL complex to the X chromosome during Drosophila dosage compensation
-
Soruco M.M., Chery J., Bishop E.P., Siggers T., Tolstorukov M.Y., Leydon A.R., Sugden A.U., Goebel K., Feng J., Xia P., et al. The CLAMP protein links the MSL complex to the X chromosome during Drosophila dosage compensation. Genes Dev 2013, 27:1551-1556.
-
(2013)
Genes Dev
, vol.27
, pp. 1551-1556
-
-
Soruco, M.M.1
Chery, J.2
Bishop, E.P.3
Siggers, T.4
Tolstorukov, M.Y.5
Leydon, A.R.6
Sugden, A.U.7
Goebel, K.8
Feng, J.9
Xia, P.10
-
38
-
-
0036500632
-
The roX genes encode redundant male-specific lethal transcripts required for targeting of the MSL complex
-
Meller V.H., Rattner B.P. The roX genes encode redundant male-specific lethal transcripts required for targeting of the MSL complex. EMBO J 2002, 21:1084-1091.
-
(2002)
EMBO J
, vol.21
, pp. 1084-1091
-
-
Meller, V.H.1
Rattner, B.P.2
-
39
-
-
84951918935
-
High-affinity sites form an interaction network to facilitate spreading of the MSL complex across the X chromosome in Drosophila
-
Ramirez F., Lingg T., Toscano S., Lam K.C., Georgiev P., Chung H.R., Lajoie B.R., de Wit E., Zhan Y., de Laat W., et al. High-affinity sites form an interaction network to facilitate spreading of the MSL complex across the X chromosome in Drosophila. Mol Cell 2015, 60:146-162.
-
(2015)
Mol Cell
, vol.60
, pp. 146-162
-
-
Ramirez, F.1
Lingg, T.2
Toscano, S.3
Lam, K.C.4
Georgiev, P.5
Chung, H.R.6
Lajoie, B.R.7
de Wit, E.8
Zhan, Y.9
de Laat, W.10
-
40
-
-
2242492681
-
Extent of chromatin spreading determined by roX RNA recruitment of MSL proteins
-
Park Y., Kelley R.L., Oh H., Kuroda M.I., Meller V.H. Extent of chromatin spreading determined by roX RNA recruitment of MSL proteins. Science 2002, 298:1620-1623.
-
(2002)
Science
, vol.298
, pp. 1620-1623
-
-
Park, Y.1
Kelley, R.L.2
Oh, H.3
Kuroda, M.I.4
Meller, V.H.5
-
41
-
-
84906322449
-
Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification
-
Quinn J.J., Ilik I.A., Qu K., Georgiev P., Chu C., Akhtar A., Chang H.Y. Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification. Nat Biotechnol 2014, 32:933-940.
-
(2014)
Nat Biotechnol
, vol.32
, pp. 933-940
-
-
Quinn, J.J.1
Ilik, I.A.2
Qu, K.3
Georgiev, P.4
Chu, C.5
Akhtar, A.6
Chang, H.Y.7
-
42
-
-
70350629982
-
The dosage compensation complex shapes the conformation of the X chromosome in Drosophila
-
Grimaud C., Becker P.B. The dosage compensation complex shapes the conformation of the X chromosome in Drosophila. Genes Dev 2009, 23:2490-2495.
-
(2009)
Genes Dev
, vol.23
, pp. 2490-2495
-
-
Grimaud, C.1
Becker, P.B.2
-
43
-
-
77649210955
-
Nuclear pore proteins nup153 and megator define transcriptionally active regions in the Drosophila genome
-
e1000846
-
Vaquerizas J.M., Suyama R., Kind J., Miura K., Luscombe N.M., Akhtar A. Nuclear pore proteins nup153 and megator define transcriptionally active regions in the Drosophila genome. PLoS Genet 2010, 6. e1000846.
-
(2010)
PLoS Genet
, vol.6
-
-
Vaquerizas, J.M.1
Suyama, R.2
Kind, J.3
Miura, K.4
Luscombe, N.M.5
Akhtar, A.6
-
45
-
-
0033546359
-
Dosage compensation proteins targeted to X chromosomes by a determinant of hermaphrodite fate
-
Dawes H.E., Berlin D.S., Lapidus D.M., Nusbaum C., Davis T.L., Meyer B.J. Dosage compensation proteins targeted to X chromosomes by a determinant of hermaphrodite fate. Science 1999, 284:1800-1804.
-
(1999)
Science
, vol.284
, pp. 1800-1804
-
-
Dawes, H.E.1
Berlin, D.S.2
Lapidus, D.M.3
Nusbaum, C.4
Davis, T.L.5
Meyer, B.J.6
-
46
-
-
33845244857
-
Clustered DNA motifs mark X chromosomes for repression by a dosage compensation complex
-
McDonel P., Jans J., Peterson B.K., Meyer B.J. Clustered DNA motifs mark X chromosomes for repression by a dosage compensation complex. Nature 2006, 444:614-618.
-
(2006)
Nature
, vol.444
, pp. 614-618
-
-
McDonel, P.1
Jans, J.2
Peterson, B.K.3
Meyer, B.J.4
-
47
-
-
71849116882
-
The C. elegans dosage compensation complex propagates dynamically and independently of X chromosome sequence
-
Ercan S., Dick L.L., Lieb J.D. The C. elegans dosage compensation complex propagates dynamically and independently of X chromosome sequence. Curr Biol CB 2009, 19:1777-1787.
-
(2009)
Curr Biol CB
, vol.19
, pp. 1777-1787
-
-
Ercan, S.1
Dick, L.L.2
Lieb, J.D.3
-
48
-
-
84866914821
-
H4K20me1 contributes to downregulation of X-linked genes for C. elegans dosage compensation
-
e1002933
-
Vielle A., Lang J., Dong Y., Ercan S., Kotwaliwale C., Rechtsteiner A., Appert A., Chen Q.B., Dose A., Egelhofer T., et al. H4K20me1 contributes to downregulation of X-linked genes for C. elegans dosage compensation. PLoS Genet 2012, 8. e1002933.
-
(2012)
PLoS Genet
, vol.8
-
-
Vielle, A.1
Lang, J.2
Dong, Y.3
Ercan, S.4
Kotwaliwale, C.5
Rechtsteiner, A.6
Appert, A.7
Chen, Q.B.8
Dose, A.9
Egelhofer, T.10
-
49
-
-
84879288762
-
Condensin controls recruitment of RNA polymerase II to achieve nematode X-chromosome dosage compensation
-
e00808
-
Kruesi W.S., Core L.J., Waters C.T., Lis J.T., Meyer B.J. Condensin controls recruitment of RNA polymerase II to achieve nematode X-chromosome dosage compensation. eLife 2013, 2. e00808.
-
(2013)
eLife
, vol.2
-
-
Kruesi, W.S.1
Core, L.J.2
Waters, C.T.3
Lis, J.T.4
Meyer, B.J.5
-
50
-
-
84861373533
-
Caenorhabditis elegans dosage compensation regulates histone H4 chromatin state on X chromosomes
-
Wells M.B., Snyder M.J., Custer L.M., Csankovszki G. Caenorhabditis elegans dosage compensation regulates histone H4 chromatin state on X chromosomes. Mol Cell Biol 2012, 32:1710-1719.
-
(2012)
Mol Cell Biol
, vol.32
, pp. 1710-1719
-
-
Wells, M.B.1
Snyder, M.J.2
Custer, L.M.3
Csankovszki, G.4
-
51
-
-
0028104856
-
DPY-27: a chromosome condensation protein homolog that regulates C. elegans dosage compensation through association with the X chromosome
-
Chuang P.T., Albertson D.G., Meyer B.J. DPY-27: a chromosome condensation protein homolog that regulates C. elegans dosage compensation through association with the X chromosome. Cell 1994, 79:459-474.
-
(1994)
Cell
, vol.79
, pp. 459-474
-
-
Chuang, P.T.1
Albertson, D.G.2
Meyer, B.J.3
-
52
-
-
84914177367
-
Differential spatial and structural organization of the X chromosome underlies dosage compensation in C. elegans
-
Sharma R., Jost D., Kind J., Gomez-Saldivar G., van Steensel B., Askjaer P., Vaillant C., Meister P. Differential spatial and structural organization of the X chromosome underlies dosage compensation in C. elegans. Genes Dev 2014, 28:2591-2596.
-
(2014)
Genes Dev
, vol.28
, pp. 2591-2596
-
-
Sharma, R.1
Jost, D.2
Kind, J.3
Gomez-Saldivar, G.4
van Steensel, B.5
Askjaer, P.6
Vaillant, C.7
Meister, P.8
-
53
-
-
84988958100
-
The C. elegans dosage compensation complex mediates interphase X chromosome compaction
-
Lau A.C., Nabeshima K., Csankovszki G. The C. elegans dosage compensation complex mediates interphase X chromosome compaction. Epigenet Chromatin 2014, 7:31.
-
(2014)
Epigenet Chromatin
, vol.7
, pp. 31
-
-
Lau, A.C.1
Nabeshima, K.2
Csankovszki, G.3
-
54
-
-
84936945257
-
Condensin-driven remodelling of X chromosome topology during dosage compensation
-
Crane E., Bian Q., McCord R.P., Lajoie B.R., Wheeler B.S., Ralston E.J., Uzawa S., Dekker J., Meyer B.J. Condensin-driven remodelling of X chromosome topology during dosage compensation. Nature 2015, 523:240-244.
-
(2015)
Nature
, vol.523
, pp. 240-244
-
-
Crane, E.1
Bian, Q.2
McCord, R.P.3
Lajoie, B.R.4
Wheeler, B.S.5
Ralston, E.J.6
Uzawa, S.7
Dekker, J.8
Meyer, B.J.9
-
55
-
-
79551584898
-
Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2
-
Ikegami K., Egelhofer T.A., Strome S., Lieb J.D. Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2. Genome Biol 2010, 11:R120.
-
(2010)
Genome Biol
, vol.11
, pp. R120
-
-
Ikegami, K.1
Egelhofer, T.A.2
Strome, S.3
Lieb, J.D.4
-
56
-
-
84865687580
-
Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery
-
Towbin B.D., Gonzalez-Aguilera C., Sack R., Gaidatzis D., Kalck V., Meister P., Askjaer P., Gasser S.M. Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery. Cell 2012, 150:934-947.
-
(2012)
Cell
, vol.150
, pp. 934-947
-
-
Towbin, B.D.1
Gonzalez-Aguilera, C.2
Sack, R.3
Gaidatzis, D.4
Kalck, V.5
Meister, P.6
Askjaer, P.7
Gasser, S.M.8
-
57
-
-
84884596364
-
Integral nuclear pore proteins bind to Pol III-transcribed genes and are required for Pol III transcript processing in C. elegans
-
Ikegami K., Lieb J.D. Integral nuclear pore proteins bind to Pol III-transcribed genes and are required for Pol III transcript processing in C. elegans. Mol Cell 2013, 51:840-849.
-
(2013)
Mol Cell
, vol.51
, pp. 840-849
-
-
Ikegami, K.1
Lieb, J.D.2
-
58
-
-
84952669991
-
Linking dosage compensation and X chromosome nuclear organization in C. elegans
-
Sharma R., Meister P. Linking dosage compensation and X chromosome nuclear organization in C. elegans. Nucleus 2015, 6:266-272.
-
(2015)
Nucleus
, vol.6
, pp. 266-272
-
-
Sharma, R.1
Meister, P.2
-
59
-
-
0037083376
-
Capturing chromosome conformation
-
Dekker J., Rippe K., Dekker M., Kleckner N. Capturing chromosome conformation. Science 2002, 295:1306-1311.
-
(2002)
Science
, vol.295
, pp. 1306-1311
-
-
Dekker, J.1
Rippe, K.2
Dekker, M.3
Kleckner, N.4
-
60
-
-
33750212321
-
Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C)
-
Simonis M., Klous P., Splinter E., Moshkin Y., Willemsen R., de Wit E., van Steensel B., de Laat W. Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C). Nat Genet 2006, 38:1348-1354.
-
(2006)
Nat Genet
, vol.38
, pp. 1348-1354
-
-
Simonis, M.1
Klous, P.2
Splinter, E.3
Moshkin, Y.4
Willemsen, R.5
de Wit, E.6
van Steensel, B.7
de Laat, W.8
-
61
-
-
33749400168
-
Chromosome conformation capture carbon copy (5C): a massively parallel solution for mapping interactions between genomic elements
-
Dostie J., Richmond T.A., Arnaout R.A., Selzer R.R., Lee W.L., Honan T.A., Rubio E.D., Krumm A., Lamb J., Nusbaum C., et al. Chromosome conformation capture carbon copy (5C): a massively parallel solution for mapping interactions between genomic elements. Genome Res 2006, 16:1299-1309.
-
(2006)
Genome Res
, vol.16
, pp. 1299-1309
-
-
Dostie, J.1
Richmond, T.A.2
Arnaout, R.A.3
Selzer, R.R.4
Lee, W.L.5
Honan, T.A.6
Rubio, E.D.7
Krumm, A.8
Lamb, J.9
Nusbaum, C.10
-
62
-
-
70349873824
-
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
-
Lieberman-Aiden E., van Berkum N.L., Williams L., Imakaev M., Ragoczy T., Telling A., Amit I., Lajoie B.R., Sabo P.J., Dorschner M.O., et al. Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science 2009, 326:289-293.
-
(2009)
Science
, vol.326
, pp. 289-293
-
-
Lieberman-Aiden, E.1
van Berkum, N.L.2
Williams, L.3
Imakaev, M.4
Ragoczy, T.5
Telling, A.6
Amit, I.7
Lajoie, B.R.8
Sabo, P.J.9
Dorschner, M.O.10
-
63
-
-
70149094741
-
Global identification of yeast chromosome interactions using genome conformation capture
-
Rodley C.D., Bertels F., Jones B., O'Sullivan J.M. Global identification of yeast chromosome interactions using genome conformation capture. Fungal Genet Biol 2009, 46:879-886.
-
(2009)
Fungal Genet Biol
, vol.46
, pp. 879-886
-
-
Rodley, C.D.1
Bertels, F.2
Jones, B.3
O'Sullivan, J.M.4
-
64
-
-
77952744854
-
A three-dimensional model of the yeast genome
-
Duan Z., Andronescu M., Schutz K., McIlwain S., Kim Y.J., Lee C., Shendure J., Fields S., Blau C.A., Noble W.S. A three-dimensional model of the yeast genome. Nature 2010, 465:363-367.
-
(2010)
Nature
, vol.465
, pp. 363-367
-
-
Duan, Z.1
Andronescu, M.2
Schutz, K.3
McIlwain, S.4
Kim, Y.J.5
Lee, C.6
Shendure, J.7
Fields, S.8
Blau, C.A.9
Noble, W.S.10
|