-
2
-
-
0033214175
-
Functions of the exosome in rRNA, snoRNA and snRNA synthesis
-
Allmang C., Kufel J., Chanfreau G., Mitchell P., Petfalski E., Tollervey D. Functions of the exosome in rRNA, snoRNA and snRNA synthesis. EMBO J. 1999, 18:5399-5410.
-
(1999)
EMBO J.
, vol.18
, pp. 5399-5410
-
-
Allmang, C.1
Kufel, J.2
Chanfreau, G.3
Mitchell, P.4
Petfalski, E.5
Tollervey, D.6
-
3
-
-
84878893667
-
Comprehensive analysis of the HEPN superfamily: identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing
-
Anantharaman V., Makarova K.S., Burroughs A.M., Koonin E.V., Aravind L. Comprehensive analysis of the HEPN superfamily: identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing. Biol. Direct 2013, 8:15.
-
(2013)
Biol. Direct
, vol.8
, pp. 15
-
-
Anantharaman, V.1
Makarova, K.S.2
Burroughs, A.M.3
Koonin, E.V.4
Aravind, L.5
-
4
-
-
77957223021
-
Role of the RNA/DNA kinase Grc3 in transcription termination by RNA polymerase I
-
Braglia P., Heindl K., Schleiffer A., Martinez J., Proudfoot N.J. Role of the RNA/DNA kinase Grc3 in transcription termination by RNA polymerase I. EMBO Rep. 2010, 11:758-764.
-
(2010)
EMBO Rep.
, vol.11
, pp. 758-764
-
-
Braglia, P.1
Heindl, K.2
Schleiffer, A.3
Martinez, J.4
Proudfoot, N.J.5
-
5
-
-
0032557455
-
Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3' end formation
-
Briggs M.W., Burkard K.T., Butler J.S. Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3' end formation. J. Biol. Chem. 1998, 273:13255-13263.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 13255-13263
-
-
Briggs, M.W.1
Burkard, K.T.2
Butler, J.S.3
-
6
-
-
84902096257
-
Congenital lethal motor neuron disease with a novel defect in ribosome biogenesis
-
Butterfield R.J., Stevenson T.J., Xing L., Newcomb T.M., Nelson B., Zeng W., Li X., Lu H.M., Lu H., Farwell Gonzalez K.D., et al. Congenital lethal motor neuron disease with a novel defect in ribosome biogenesis. Neurology 2014, 82:1322-1330.
-
(2014)
Neurology
, vol.82
, pp. 1322-1330
-
-
Butterfield, R.J.1
Stevenson, T.J.2
Xing, L.3
Newcomb, T.M.4
Nelson, B.5
Zeng, W.6
Li, X.7
Lu, H.M.8
Lu, H.9
Farwell Gonzalez, K.D.10
-
7
-
-
77956709811
-
Las1L is a nucleolar protein required for cell proliferation and ribosome biogenesis
-
Castle C.D., Cassimere E.K., Lee J., Denicourt C. Las1L is a nucleolar protein required for cell proliferation and ribosome biogenesis. Mol. Cell. Biol. 2010, 30:4404-4414.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 4404-4414
-
-
Castle, C.D.1
Cassimere, E.K.2
Lee, J.3
Denicourt, C.4
-
8
-
-
84875471381
-
Las1 interacts with Grc3 polynucleotide kinase and is required for ribosome synthesis in Saccharomyces cerevisiae
-
Castle C.D., Sardana R., Dandekar V., Borgianini V., Johnson A.W., Denicourt C. Las1 interacts with Grc3 polynucleotide kinase and is required for ribosome synthesis in Saccharomyces cerevisiae. Nucleic Acids Res. 2013, 41:1135-1150.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 1135-1150
-
-
Castle, C.D.1
Sardana, R.2
Dandekar, V.3
Borgianini, V.4
Johnson, A.W.5
Denicourt, C.6
-
9
-
-
0037677692
-
ITS2 is a double-edged tool for eukaryote evolutionary comparisons
-
Coleman A.W. ITS2 is a double-edged tool for eukaryote evolutionary comparisons. Trends Genet. 2003, 19:370-375.
-
(2003)
Trends Genet.
, vol.19
, pp. 370-375
-
-
Coleman, A.W.1
-
10
-
-
0036276111
-
Dynamic conformational model for the role of ITS2 in pre-rRNA processing in yeast
-
Côté C.A., Greer C.L., Peculis B.A. Dynamic conformational model for the role of ITS2 in pre-rRNA processing in yeast. RNA 2002, 8:786-797.
-
(2002)
RNA
, vol.8
, pp. 786-797
-
-
Côté, C.A.1
Greer, C.L.2
Peculis, B.A.3
-
11
-
-
0032481316
-
Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3' end formation of 5.8S rRNA in Saccharomyces cerevisiae
-
de la Cruz J., Kressler D., Tollervey D., Linder P. Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3' end formation of 5.8S rRNA in Saccharomyces cerevisiae. EMBO J. 1998, 17:1128-1140.
-
(1998)
EMBO J.
, vol.17
, pp. 1128-1140
-
-
de la Cruz, J.1
Kressler, D.2
Tollervey, D.3
Linder, P.4
-
12
-
-
84930708678
-
Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo
-
de la Cruz J., Karbstein K., Woolford J.L. Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo. Annu. Rev. Biochem. 2015, 84:93-129.
-
(2015)
Annu. Rev. Biochem.
, vol.84
, pp. 93-129
-
-
de la Cruz, J.1
Karbstein, K.2
Woolford, J.L.3
-
13
-
-
84936847063
-
Structural Characterization of the Chaetomium thermophilum TREX-2 Complex and its Interaction with the mRNA Nuclear Export Factor Mex67:Mtr2
-
Dimitrova L., Valkov E., Aibara S., Flemming D., McLaughlin S.H., Hurt E., Stewart M. Structural Characterization of the Chaetomium thermophilum TREX-2 Complex and its Interaction with the mRNA Nuclear Export Factor Mex67:Mtr2. Structure 2015, 23:1246-1257.
-
(2015)
Structure
, vol.23
, pp. 1246-1257
-
-
Dimitrova, L.1
Valkov, E.2
Aibara, S.3
Flemming, D.4
McLaughlin, S.H.5
Hurt, E.6
Stewart, M.7
-
14
-
-
25844461364
-
Rat1p and Rai1p function with the nuclear exosome in the processing and degradation of rRNA precursors
-
Fang F., Phillips S., Butler J.S. Rat1p and Rai1p function with the nuclear exosome in the processing and degradation of rRNA precursors. RNA 2005, 11:1571-1578.
-
(2005)
RNA
, vol.11
, pp. 1571-1578
-
-
Fang, F.1
Phillips, S.2
Butler, J.S.3
-
15
-
-
84948614429
-
Structural basis for assembly and function of the Nup82 complex in the nuclear pore scaffold
-
Gaik M., Flemming D., von Appen A., Kastritis P., Mücke N., Fischer J., Stelter P., Ori A., Bui K.H., Baßler J., et al. Structural basis for assembly and function of the Nup82 complex in the nuclear pore scaffold. J. Cell Biol. 2015, 208:283-297.
-
(2015)
J. Cell Biol.
, vol.208
, pp. 283-297
-
-
Gaik, M.1
Flemming, D.2
von Appen, A.3
Kastritis, P.4
Mücke, N.5
Fischer, J.6
Stelter, P.7
Ori, A.8
Bui, K.H.9
Baßler, J.10
-
16
-
-
0036711227
-
Structure of a tRNA repair enzyme and molecular biology workhorse: T4 polynucleotide kinase
-
Galburt E.A., Pelletier J., Wilson G., Stoddard B.L. Structure of a tRNA repair enzyme and molecular biology workhorse: T4 polynucleotide kinase. Structure 2002, 10:1249-1260.
-
(2002)
Structure
, vol.10
, pp. 1249-1260
-
-
Galburt, E.A.1
Pelletier, J.2
Wilson, G.3
Stoddard, B.L.4
-
17
-
-
0034548433
-
The final step in the formation of 25S rRNA in Saccharomyces cerevisiae is performed by 5'-->3' exonucleases
-
Geerlings T.H., Vos J.C., Raué H.A. The final step in the formation of 25S rRNA in Saccharomyces cerevisiae is performed by 5'-->3' exonucleases. RNA 2000, 6:1698-1703.
-
(2000)
RNA
, vol.6
, pp. 1698-1703
-
-
Geerlings, T.H.1
Vos, J.C.2
Raué, H.A.3
-
18
-
-
0033152626
-
Mechanism of non-spliceosomal mRNA splicing in the unfolded protein response pathway
-
Gonzalez T.N., Sidrauski C., Dörfler S., Walter P. Mechanism of non-spliceosomal mRNA splicing in the unfolded protein response pathway. EMBO J. 1999, 18:3119-3132.
-
(1999)
EMBO J.
, vol.18
, pp. 3119-3132
-
-
Gonzalez, T.N.1
Sidrauski, C.2
Dörfler, S.3
Walter, P.4
-
19
-
-
80053594862
-
A cluster of ribosome synthesis factors regulate pre-rRNA folding and 5.8S rRNA maturation by the Rat1 exonuclease
-
Granneman S., Petfalski E., Tollervey D. A cluster of ribosome synthesis factors regulate pre-rRNA folding and 5.8S rRNA maturation by the Rat1 exonuclease. EMBO J. 2011, 30:4006-4019.
-
(2011)
EMBO J.
, vol.30
, pp. 4006-4019
-
-
Granneman, S.1
Petfalski, E.2
Tollervey, D.3
-
20
-
-
9644310314
-
The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II
-
Kim M., Krogan N.J., Vasiljeva L., Rando O.J., Nedea E., Greenblatt J.F., Buratowski S. The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II. Nature 2004, 432:517-522.
-
(2004)
Nature
, vol.432
, pp. 517-522
-
-
Kim, M.1
Krogan, N.J.2
Vasiljeva, L.3
Rando, O.J.4
Nedea, E.5
Greenblatt, J.F.6
Buratowski, S.7
-
22
-
-
84925286904
-
Noncoding RNAs in eukaryotic ribosome biogenesis and function
-
Lafontaine D.L. Noncoding RNAs in eukaryotic ribosome biogenesis and function. Nat. Struct. Mol. Biol. 2015, 22:11-19.
-
(2015)
Nat. Struct. Mol. Biol.
, vol.22
, pp. 11-19
-
-
Lafontaine, D.L.1
-
23
-
-
0031820288
-
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
-
Longtine M.S., McKenzie A., Demarini D.J., Shah N.G., Wach A., Brachat A., Philippsen P., Pringle J.R. Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 1998, 14:953-961.
-
(1998)
Yeast
, vol.14
, pp. 953-961
-
-
Longtine, M.S.1
McKenzie, A.2
Demarini, D.J.3
Shah, N.G.4
Wach, A.5
Brachat, A.6
Philippsen, P.7
Pringle, J.R.8
-
24
-
-
0029939247
-
The 3' end of yeast 5.8S rRNA is generated by an exonuclease processing mechanism
-
Mitchell P., Petfalski E., Tollervey D. The 3' end of yeast 5.8S rRNA is generated by an exonuclease processing mechanism. Genes Dev. 1996, 10:502-513.
-
(1996)
Genes Dev.
, vol.10
, pp. 502-513
-
-
Mitchell, P.1
Petfalski, E.2
Tollervey, D.3
-
25
-
-
0141669145
-
Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs
-
Mitchell P., Petfalski E., Houalla R., Podtelejnikov A., Mann M., Tollervey D. Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs. Mol. Cell. Biol. 2003, 23:6982-6992.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 6982-6992
-
-
Mitchell, P.1
Petfalski, E.2
Houalla, R.3
Podtelejnikov, A.4
Mann, M.5
Tollervey, D.6
-
26
-
-
73349085934
-
An auxin-based degron system for the rapid depletion of proteins in nonplant cells
-
Nishimura K., Fukagawa T., Takisawa H., Kakimoto T., Kanemaki M. An auxin-based degron system for the rapid depletion of proteins in nonplant cells. Nat. Methods 2009, 6:917-922.
-
(2009)
Nat. Methods
, vol.6
, pp. 917-922
-
-
Nishimura, K.1
Fukagawa, T.2
Takisawa, H.3
Kakimoto, T.4
Kanemaki, M.5
-
27
-
-
33846688769
-
Structure of a nucleotide-bound Clp1-Pcf11 polyadenylation factor
-
Noble C.G., Beuth B., Taylor I.A. Structure of a nucleotide-bound Clp1-Pcf11 polyadenylation factor. Nucleic Acids Res. 2007, 35:87-99.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 87-99
-
-
Noble, C.G.1
Beuth, B.2
Taylor, I.A.3
-
28
-
-
71149112138
-
Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNA
-
Oeffinger M., Zenklusen D., Ferguson A., Wei K.E., El Hage A., Tollervey D., Chait B.T., Singer R.H., Rout M.P. Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNA. Mol. Cell 2009, 36:768-781.
-
(2009)
Mol. Cell
, vol.36
, pp. 768-781
-
-
Oeffinger, M.1
Zenklusen, D.2
Ferguson, A.3
Wei, K.E.4
El Hage, A.5
Tollervey, D.6
Chait, B.T.7
Singer, R.H.8
Rout, M.P.9
-
29
-
-
84856807167
-
The evolutionarily conserved protein Las1 is required for pre-rRNA processing at both ends of ITS2
-
Schillewaert S., Wacheul L., Lhomme F., Lafontaine D.L. The evolutionarily conserved protein Las1 is required for pre-rRNA processing at both ends of ITS2. Mol. Cell. Biol. 2012, 32:430-444.
-
(2012)
Mol. Cell. Biol.
, vol.32
, pp. 430-444
-
-
Schillewaert, S.1
Wacheul, L.2
Lhomme, F.3
Lafontaine, D.L.4
-
30
-
-
0018902741
-
Purification and characterization of a Saccharomyces cerevisiae exoribonuclease which yields 5'-mononucleotides by a 5' leads to 3' mode of hydrolysis
-
Stevens A. Purification and characterization of a Saccharomyces cerevisiae exoribonuclease which yields 5'-mononucleotides by a 5' leads to 3' mode of hydrolysis. J. Biol. Chem. 1980, 255:3080-3085.
-
(1980)
J. Biol. Chem.
, vol.255
, pp. 3080-3085
-
-
Stevens, A.1
-
31
-
-
84887113964
-
Ribosome biogenesis in the yeast Saccharomyces cerevisiae
-
Woolford J.L., Baserga S.J. Ribosome biogenesis in the yeast Saccharomyces cerevisiae. Genetics 2013, 195:643-681.
-
(2013)
Genetics
, vol.195
, pp. 643-681
-
-
Woolford, J.L.1
Baserga, S.J.2
-
32
-
-
64749111945
-
Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1
-
Xiang S., Cooper-Morgan A., Jiao X., Kiledjian M., Manley J.L., Tong L. Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1. Nature 2009, 458:784-788.
-
(2009)
Nature
, vol.458
, pp. 784-788
-
-
Xiang, S.1
Cooper-Morgan, A.2
Jiao, X.3
Kiledjian, M.4
Manley, J.L.5
Tong, L.6
-
33
-
-
79951678159
-
Nucleases: diversity of structure, function and mechanism
-
Yang W. Nucleases: diversity of structure, function and mechanism. Q. Rev. Biophys. 2011, 44:1-93.
-
(2011)
Q. Rev. Biophys.
, vol.44
, pp. 1-93
-
-
Yang, W.1
|