Control of ATP concentration in Escherichia coli using synthetic small regulatory RNAs for enhanced S-adenosylmethionine production

FEMS Microbiology Letters

Volumn 362, Issue 15, 2015, Pages

  Chen, Yawei ^a,b   Lou, Shuangyan ^a   Fan, Lihai ^a   Zhang, Xu ^a   Tan, Tianwei ^a  

^a BEIJING UNIVERSITY OF CHEMICAL TECHNOLOGY   (China)

^b HENAN UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

Author keywords

ATP; Escherichia coli; S adenosylmethionine; Synthetic sRNA

Indexed keywords

ADENOSINE DIPHOSPHATE; ADENOSINE TRIPHOSPHATE; RNA; S ADENOSYLMETHIONINE; TRANSFER RNA; REGULATORY RNA SEQUENCE; SMALL UNTRANSLATED RNA;

ARGB GENE; ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BIOSYNTHESIS; CELL GROWTH; CONTROLLED STUDY; DOWN REGULATION; ESCHERICHIA COLI; FERMENTATION; GENE; GENE REPRESSION; GENE SILENCING; GLNA GENE; METABOLITE; NONHUMAN; PRIORITY JOURNAL; PROB GENE; PROCESS OPTIMIZATION; PROTEIN EXPRESSION; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; REGULATORY RNA SEQUENCE;

ADENOSINE TRIPHOSPHATE; DOWN-REGULATION; ESCHERICHIA COLI; FERMENTATION; GENE EXPRESSION REGULATION, BACTERIAL; REGULATORY SEQUENCES, RIBONUCLEIC ACID; RNA, SMALL UNTRANSLATED; S-ADENOSYLMETHIONINE;

EID: 84949228420     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1093/femsle/fnv115     Document Type: Article

References (31)

1. Ahn J, Chung BKS, Lee D, et al. NADPH-dependent pgi-gene knockout Escherichia coli metabolism producing shikimate on different carbon sources. FEMS Microbiol Lett 2011;324:10-6.
2. Anstee QM, Day CP. S-adenosylmethionine(SAMe) therapy in liver disease: a review of current evidence and clinical utility. J Hepatol 2012;57:1097-109.
3. Blewett HJH. Exploring the mechanisms behind Sadenosylmethionine (SAMe) in the treatment of osteoarthritis. Crit Rev Food Sci 2008;48:458-63.
4. Chen YW, Xu DB, Fan LH, et al. Manipulating multi-system of NADPH regulation in Escherichia coli for enhanced Sadenosylmethionine production. RSC Adv 2015;5:41103-11.
5. Eggenhofer F, Tafer H, Stadler PF, et al. RNApredator: fast accessibility-based prediction of sRNA targets. Nucleic Acids Res 2011;39:W149-54.
6. Ferrer-Miralles N, Domingo-Espin J, Corchero JL, et al. Microbial factories for recombinant pharmaceuticals. Microb Cell Fact 2009;8:17.
7. Gottesman S. The small RNA regulators of Escherichia coli: roles and mechanisms. Annu Rev Microbiol 2004;58:303-28.
8. Holm AK, Blank LM, Oldiges M, et al. Metabolic and transcriptional response to cofactor perturbations in Escherichia coli. J Biol Chem 2010;285:17498-506.
9. Hou J, Lages NF, Oldiges M, et al. Metabolic impact of redox cofactor perturbations in Saccharomy cescerevisiae. Metab Eng 2009;11:253-61.
10. Hu H, Qian JC, Chu J, et al. Optimization of L-methionine feeding strategy for improving S-adenosyl-L-methionine production by methionine adenosyltransferase overexpressed Pichia pastoris. Appl Microbiol Biot 2009;83:1105-14.
11. Ji XJ, Xia ZF, Fu NH, et al. Cofactor engineering through heterologous expression of an NADH oxidase and its impact on metabolic flux redistribution in Klebsiella pneumonia. Biotechnol Biofuels 2013;6:7.
12. Kim B, Park H, Na D, et al. Metabolic engineering of Escherichia coli for the production of phenol from glucose. Biotechnol J 2014;9:621-9.
13. Kim HJ, Kwon YD, Lee SY, et al. An engineered Escherichia coli having a high intracellular level of ATP and enhanced recombinant protein production. Appl Microbiol Biotechnol 2012;94:1079-86.
14. Kwon YD, Lee SY, Kim P. A physiology study of Escherichia coli overexpressing phosphoenolpyruvate carboxykinase. Biosci Biotech Bioch 2008;72:1138-41.
15. Li MH, Meng XM, Diao EJ, et al. Productivity enhancement of S-adenosylmethionine in Saccharomyces cerevisiae using n-hexadecane as oxygen vector. J Chem Technol Biotechnol 2012;87:1379-84.
16. Liu YF, Zhu YQ, Li JH, et al. Modular pathway engineering of Bacillus subtilis for improved N-acetylglucosamine production. Metab Eng 2014;23:42-52.
17. Lu SC. S-Adenosylmethionine. Int J Biochem Cell B 2000;32:391-5. Markham NR, Zuker M. DINAMelt web server for nucleic acid melting prediction. Nucleic Acids Res 2005;33:W577-81.
18. Markham NR, Zuker M. DINAMelt web server for nucleic acid melting prediction. Nucleic Acids Res 2005;33:W577-81
19. Na D, Yoo SM, Chung H, et al. Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs. Nat Biotechnol 2013;31:170-4.
20. Na YA, Lee JY, Bang WJ, et al. Growth retardation of Escherichia coli by artificial increase of intracellular ATP. J Ind Microbiol Biotechnol 2015;42:915-24.
21. Roje S. S-Adenosyl-L-methionine: beyond the universal methyl group donor. Phytochemistry 2006;67:1686-98.
22. Shi AQ, Zhu XN, Lu J, et al. Activating transhydrogenase and NAD kinase in combination for improving isobutanol production. Metab Eng 2013;16:1-10.
23. Shiomi N, Fukuda H, Fukuda Y, et al. Production of S-adenosyl- L-methionine by Saccharomyces cerevisiae cells carrying a gene for ethionine resistance. Biotechnol Bioeng 1990;35:1120-4.
24. Van derWatt G, Laugharne J, Janca A. Complementary and alternative medicine in the treatment of anxiety and depression. Curr Opin Psychiatr 2008;21:37-42.
25. Wang MM, Hu LJ, Fan LH, et al. Enhanced 1-Butanol Production in Engineered Klebsiella pneumoniae by NADH Regeneration. Energ Fuel 2015;29:1823-9.
26. Wang YL, Wang DH, Wei GY, et al. Improved co-production of S-adenosylmethionine and glutathione using citrate as an auxiliary energy substrate. Bioresource Technol 2013;131: 28-32.
27. Wei XN, Cao MJ, Li J, et al. Synthesis of S-adenosyl-L-methionine in Escherichia coli. Biotechnol Bioproc E 2014;19:958-64.
28. Weusthuis RA, Lamot I, van der Oost J, et al. Microbial production of bulk chemicals: development of anaerobic processes. Trends Biotechnol 2011;29:153-8.
29. Wu Z, Wang Z, Wang G, et al. Improved 1,3-propanediol production by engineering the 2,3-butanediol and formic acid pathways in integrative recombinant Klebsiella pneumonia. J Biotechnol 2013;168:194-200.
30. Yoo SM, Na D, Lee SY. Design and use of synthetic regulatory small RNAs to control gene expression in Escherichia coli. Nat Protoc 2013;8:1694-707.
31. Zhang JG, Wang XD, Zhang JN, et al. Oxygen vectors used for Sadenosylmethionine production in recombinant Pichia pastoris with sorbitol as supplemental carbon source. J Biosci Bioeng 2008;105:335-40.