-
1
-
-
0024805974
-
A novel family of potentially mobile DNA elements encoding site-specific gene-integration functions: integrons
-
Stokes HW, Hall RM. 1989. A novel family of potentially mobile DNA elements encoding site-specific gene-integration functions: integrons. Mol Microbiol 3:1669-1683.
-
(1989)
Mol Microbiol
, vol.3
, pp. 1669-1683
-
-
Stokes, H.W.1
Hall, R.M.2
-
2
-
-
76749094135
-
Inverse correlation between promoter strength and excision activity in class 1 integrons
-
Jové T, Da Re S, Denis F, Mazel D, Ploy MC. 2010. Inverse correlation between promoter strength and excision activity in class 1 integrons. PLoS Genet 6:e1000793.
-
(2010)
PLoS Genet
, vol.6
-
-
Jové, T.1
Da Re, S.2
Denis, F.3
Mazel, D.4
Ploy, M.C.5
-
3
-
-
0028353720
-
Diversity and relative strength of tandem promoters for the antibiotic-resistance genes of several integrons
-
Levesque C, Brassard S, Lapointe J, Roy PH. 1994. Diversity and relative strength of tandem promoters for the antibiotic-resistance genes of several integrons. Gene 142:49-54.
-
(1994)
Gene
, vol.142
, pp. 49-54
-
-
Levesque, C.1
Brassard, S.2
Lapointe, J.3
Roy, P.H.4
-
4
-
-
0028835869
-
Expression of antibiotic resistance genes in the integrated cassettes of integrons
-
Collis CM, Hall RM. 1995. Expression of antibiotic resistance genes in the integrated cassettes of integrons. Antimicrob Agents Chemother 39:155-162.
-
(1995)
Antimicrob Agents Chemother
, vol.39
, pp. 155-162
-
-
Collis, C.M.1
Hall, R.M.2
-
5
-
-
0026761976
-
Gene cassettes from the insert region of integrons are excised as covalently closed circles
-
Collis CM, Hall RM. 1992. Gene cassettes from the insert region of integrons are excised as covalently closed circles. Mol Microbiol 6:2875-2885.
-
(1992)
Mol Microbiol
, vol.6
, pp. 2875-2885
-
-
Collis, C.M.1
Hall, R.M.2
-
6
-
-
0035895252
-
The evolutionary history of chromosomal super-integrons provides an ancestry for multiresistant integrons
-
Rowe-Magnus DA, Guerout AM, Ploncard P, Dychinco B, Davies J, Mazel D. 2001. The evolutionary history of chromosomal super-integrons provides an ancestry for multiresistant integrons. Proc Natl Acad Sci U S A 98:652-657.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 652-657
-
-
Rowe-Magnus, D.A.1
Guerout, A.M.2
Ploncard, P.3
Dychinco, B.4
Davies, J.5
Mazel, D.6
-
8
-
-
45249095383
-
Insights and inferences about integron evolution from genomic data
-
Nemergut DR, Robeson MS, Kysela RF, Martin AP, Schmidt SK, Knight R. 2008. Insights and inferences about integron evolution from genomic data. BMC genomics 9:261.
-
(2008)
BMC genomics
, vol.9
, pp. 261
-
-
Nemergut, D.R.1
Robeson, M.S.2
Kysela, R.F.3
Martin, A.P.4
Schmidt, S.K.5
Knight, R.6
-
9
-
-
57149092385
-
Synonymous genes explore different evolutionary landscapes
-
Cambray G, Mazel D. 2008. Synonymous genes explore different evolutionary landscapes. PLoS Genet 4(11):e1000256.
-
(2008)
PLoS Genet
, vol.4
, Issue.11
-
-
Cambray, G.1
Mazel, D.2
-
10
-
-
34347364443
-
Integrons: mobilizable platforms that promote genetic diversity in bacteria
-
Boucher Y, Labbate M, Koenig JE, Stokes HW. 2007. Integrons: mobilizable platforms that promote genetic diversity in bacteria. Trends Microbiol 15:301-309.
-
(2007)
Trends Microbiol
, vol.15
, pp. 301-309
-
-
Boucher, Y.1
Labbate, M.2
Koenig, J.E.3
Stokes, H.W.4
-
11
-
-
33747183094
-
Integrons: agents of bacterial evolution
-
Mazel D. 2006. Integrons: agents of bacterial evolution. Nature RevMicrobiol 4:608-620.
-
(2006)
Nature RevMicrobiol
, vol.4
, pp. 608-620
-
-
Mazel, D.1
-
12
-
-
0032562596
-
A distinctive class of integron in the Vibrio cholerae genome
-
Mazel D, Dychinco B, Webb VA, Davies J. 1998. A distinctive class of integron in the Vibrio cholerae genome. Science 280:605-608.
-
(1998)
Science
, vol.280
, pp. 605-608
-
-
Mazel, D.1
Dychinco, B.2
Webb, V.A.3
Davies, J.4
-
13
-
-
0027364416
-
The gene encoding the heat-stable enterotoxin of Vibrio cholerae is flanked by 123-base pair direct repeats
-
Ogawa A, Takeda T. 1993. The gene encoding the heat-stable enterotoxin of Vibrio cholerae is flanked by 123-base pair direct repeats. Microbiol Immunol 37:607-616.
-
(1993)
Microbiol Immunol
, vol.37
, pp. 607-616
-
-
Ogawa, A.1
Takeda, T.2
-
14
-
-
0027965024
-
Identification of VCR, a repeated sequence associated with a locus encoding a hemagglutinin in Vibrio cholerae O1
-
Barker A, Clark CA, Manning PA. 1994. Identification of VCR, a repeated sequence associated with a locus encoding a hemagglutinin in Vibrio cholerae O1. J Bacteriol 176:5450-5458.
-
(1994)
J Bacteriol
, vol.176
, pp. 5450-5458
-
-
Barker, A.1
Clark, C.A.2
Manning, P.A.3
-
15
-
-
0037350819
-
Comparative analysis of superintegrons: engineering extensive genetic diversity in the Vibrionaceae
-
Rowe-Magnus DA, Guerout AM, Biskri L, Bouige P, Mazel D. 2003. Comparative analysis of superintegrons: engineering extensive genetic diversity in the Vibrionaceae. Genome Res 13:428-442.
-
(2003)
Genome Res
, vol.13
, pp. 428-442
-
-
Rowe-Magnus, D.A.1
Guerout, A.M.2
Biskri, L.3
Bouige, P.4
Mazel, D.5
-
16
-
-
0006437601
-
On the drugresistance of enteric bacteria. 4. Drug-resistance of Shigella prevalent in Japan
-
Mitsuhashi S, Harada K, Hashimoto H, Egawa R. 1961. On the drugresistance of enteric bacteria. 4. Drug-resistance of Shigella prevalent in Japan. Jpn J Exp Med 31:47-52.
-
(1961)
Jpn J Exp Med
, vol.31
, pp. 47-52
-
-
Mitsuhashi, S.1
Harada, K.2
Hashimoto, H.3
Egawa, R.4
-
17
-
-
0023858937
-
Transposon Tn21 encodes a RecAindependent site-specific integration system
-
Martinez E, de la Cruz F. 1988. Transposon Tn21 encodes a RecAindependent site-specific integration system. Mol Gen Genet 211:320-325.
-
(1988)
Mol Gen Genet
, vol.211
, pp. 320-325
-
-
Martinez, E.1
de la Cruz, F.2
-
18
-
-
0029078834
-
A novel integron-like element carrying the metallo-beta-lactamase gene blaIMP
-
Arakawa Y, Murakami M, Suzuki K, Ito H, Wacharotayankun R, Ohsuka S, Kato N, Ohta M. 1995. A novel integron-like element carrying the metallo-beta-lactamase gene blaIMP. Antimicrob Agents Chemother 39:1612-1615.
-
(1995)
Antimicrob Agents Chemother
, vol.39
, pp. 1612-1615
-
-
Arakawa, Y.1
Murakami, M.2
Suzuki, K.3
Ito, H.4
Wacharotayankun, R.5
Ohsuka, S.6
Kato, N.7
Ohta, M.8
-
19
-
-
0036097235
-
Characterization of the Class 3 integron and the site-specific recombination system it determines
-
Collis CM, Kim MJ, Partridge SR, Stokes HW, Hall RM. 2002. Characterization of the Class 3 integron and the site-specific recombination system it determines. J Bacteriol 184:3017-3026.
-
(2002)
J Bacteriol
, vol.184
, pp. 3017-3026
-
-
Collis, C.M.1
Kim, M.J.2
Partridge, S.R.3
Stokes, H.W.4
Hall, R.M.5
-
20
-
-
34548497884
-
Molecular characterization of class 3 integrons from Delftia spp
-
Xu H, Davies J, Miao V. 2007. Molecular characterization of class 3 integrons from Delftia spp. J Bacteriol 189:6276-683.
-
(2007)
J Bacteriol
, vol.189
, pp. 6276-6683
-
-
Xu, H.1
Davies, J.2
Miao, V.3
-
21
-
-
75749088507
-
Novel insights about class 2 integrons from experimental and genomic epidemiology
-
Ramírez MS, Piñeiro S, Centrón D. 2010. Novel insights about class 2 integrons from experimental and genomic epidemiology. Antimicrob Agents Chemother 54:699-706.
-
(2010)
Antimicrob Agents Chemother
, vol.54
, pp. 699-706
-
-
Ramírez, M.S.1
Piñeiro, S.2
Centrón, D.3
-
22
-
-
0034780633
-
Molecular analysis of antibiotic resistance gene clusters in Vibrio cholerae O139 and O1 SXT constins
-
Hochhut B, LotfiY, Mazel D, Faruque SM, Woodgate R, Waldor MK. 2001, Molecular analysis of antibiotic resistance gene clusters in Vibrio cholerae O139 and O1 SXT constins. Antimicrob Agents Chemother 45:2991-3000.
-
(2001)
Antimicrob Agents Chemother
, vol.45
, pp. 2991-3000
-
-
Hochhut, B.1
Lotfi, Y.2
Mazel, D.3
Faruque, S.M.4
Woodgate, R.5
Waldor, M.K.6
-
23
-
-
0026511689
-
Identification and cloning of a tetracycline resistance gene from the fish pathogen Vibrio salmonicida
-
Sørum H, Roberts MC, Crosa JH. 1992. Identification and cloning of a tetracycline resistance gene from the fish pathogen Vibrio salmonicida. Antimicrob Agents Chemother. 36:611-615.
-
(1992)
Antimicrob Agents Chemother
, vol.36
, pp. 611-615
-
-
Sørum, H.1
Roberts, M.C.2
Crosa, J.H.3
-
24
-
-
0035180863
-
Characterization of In53, a class 1 plasmid-and composite transposon-located integron of Escherichia coli which carries an unusual array of gene cassettes
-
Naas T, Mikami Y, Imai T, Poirel L, Nordmann P. 2001. Characterization of In53, a class 1 plasmid-and composite transposon-located integron of Escherichia coli which carries an unusual array of gene cassettes. J Bacteriol 183:235-249.
-
(2001)
J Bacteriol
, vol.183
, pp. 235-249
-
-
Naas, T.1
Mikami, Y.2
Imai, T.3
Poirel, L.4
Nordmann, P.5
-
26
-
-
1942472949
-
Resistance integrons and super-integrons
-
Fluit AC, Schmitz FJ. 2004. Resistance integrons and super-integrons. Clin Microbiol Infect 10:272-288.
-
(2004)
Clin Microbiol Infect
, vol.10
, pp. 272-288
-
-
Fluit, A.C.1
Schmitz, F.J.2
-
27
-
-
65549153156
-
The integron/gene cassette system: an active player in bacterial adaptation
-
Labbate M, Case RJ, Stokes HW. 2009. The integron/gene cassette system: an active player in bacterial adaptation. Methods Mol Biol 532:103-125.
-
(2009)
Methods Mol Biol
, vol.532
, pp. 103-125
-
-
Labbate, M.1
Case, R.J.2
Stokes, H.W.3
-
28
-
-
0025326948
-
Transposition of an antibiotic resistance element in mycobacteria
-
Martin C, Timm J, Rauzier J, Gomez-Lus R, Davies J, Gicquel B. 1990. Transposition of an antibiotic resistance element in mycobacteria. Nature 345:739-743.
-
(1990)
Nature
, vol.345
, pp. 739-743
-
-
Martin, C.1
Timm, J.2
Rauzier, J.3
Gomez-Lus, R.4
Davies, J.5
Gicquel, B.6
-
29
-
-
2342449125
-
Gram-positive bacteria are a major reservoir of Class 1 antibiotic resistance integrons in poultry litter
-
Nandi S, Maurer JI, Hofacre C, Summers AO. 2004. Gram-positive bacteria are a major reservoir of Class 1 antibiotic resistance integrons in poultry litter. Proc Natl Acad Sci USA 101:7118-7122.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 7118-7122
-
-
Nandi, S.1
Maurer, J.I.2
Hofacre, C.3
Summers, A.O.4
-
30
-
-
0345291181
-
An integron of class 1 is present on the plasmid pCG4 from gram-positive bacterium Corynebacterium glutamicum
-
Nesvera J, Hochmannová J, Pátek M. 1998. An integron of class 1 is present on the plasmid pCG4 from gram-positive bacterium Corynebacterium glutamicum. FEMS Microbiol Lett 169:391-395.
-
(1998)
FEMS Microbiol Lett
, vol.169
, pp. 391-395
-
-
Nesvera, J.1
Hochmannová, J.2
Pátek, M.3
-
31
-
-
33745228892
-
Unnoticed spread of class 1 integrons in gram-positive clinical strains isolated in Guangzhou, China
-
Shi L, Zheng M, Xiao Z, Asakura M, Su J, Li L, Yamasaki S. 2006. Unnoticed spread of class 1 integrons in gram-positive clinical strains isolated in Guangzhou, China. Microbiol Immunol 50:463-467.
-
(2006)
Microbiol Immunol
, vol.50
, pp. 463-467
-
-
Shi, L.1
Zheng, M.2
Xiao, Z.3
Asakura, M.4
Su, J.5
Li, L.6
Yamasaki, S.7
-
32
-
-
84864075483
-
Evidence for induction of integronbased antibiotic resistance by the SOS response in a clinical setting
-
Hocquet D, Llanes C, Thouverez M, Kulasekara HD, Bertrand X, Plésiat P, Mazel D, Miller SI. 2012. Evidence for induction of integronbased antibiotic resistance by the SOS response in a clinical setting. PLoS Pathog 8:e1002778.
-
(2012)
PLoS Pathog
, vol.8
-
-
Hocquet, D.1
Llanes, C.2
Thouverez, M.3
Kulasekara, H.D.4
Bertrand, X.5
Plésiat, P.6
Mazel, D.7
Miller, S.I.8
-
33
-
-
0032190242
-
DNA complexes obtained with the integron integrase IntI1 at the attI1 site
-
Gravel A, Fournier B, Roy PH. 1998. DNA complexes obtained with the integron integrase IntI1 at the attI1 site. Nucleic Acids Res 26:4347-4355.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 4347-4355
-
-
Gravel, A.1
Fournier, B.2
Roy, P.H.3
-
34
-
-
0033677613
-
Definition of the attI1 site of class 1 integrons
-
Partridge SR, Recchia GD, Scaramuzzi C, Collis CM, Stokes HW, Hall RM. 2000. Definition of the attI1 site of class 1 integrons. Microbiology 146:2855-2864.
-
(2000)
Microbiology
, vol.146
, pp. 2855-2864
-
-
Partridge, S.R.1
Recchia, G.D.2
Scaramuzzi, C.3
Collis, C.M.4
Stokes, H.W.5
Hall, R.M.6
-
35
-
-
0035808890
-
Recovery of new integron classes from environmental DNA
-
Nield BS, Holmes AJ, Gillings MR, Recchia GD, Mabbutt BC, Nevalainen KM, Stokes HW. 2001. Recovery of new integron classes from environmental DNA. FEMS Microbiol Lett 195: 59-65.
-
(2001)
FEMS Microbiol Lett
, vol.195
, pp. 59-65
-
-
Nield, B.S.1
Holmes, A.J.2
Gillings, M.R.3
Recchia, G.D.4
Mabbutt, B.C.5
Nevalainen, K.M.6
Stokes, H.W.7
-
36
-
-
79959574494
-
Marine integrons containing novel integrase genes, attachment sites, attI, and associated gene cassettes in polluted sediments from Suez and Tokyo Bays
-
Elsaied H, Stokes HW, Kitamura K, Kurusu Y, Kamagata Y, Maruyama A. 2011. Marine integrons containing novel integrase genes, attachment sites, attI, and associated gene cassettes in polluted sediments from Suez and Tokyo Bays. ISME J 5:1162-1177.
-
(2011)
ISME J
, vol.5
, pp. 1162-1177
-
-
Elsaied, H.1
Stokes, H.W.2
Kitamura, K.3
Kurusu, Y.4
Kamagata, Y.5
Maruyama, A.6
-
37
-
-
14244267061
-
Comparative study of class 1 integron and Vibrio cholerae superintegron integrase activities
-
Biskri L, Bouvier M, Guérout AM, Boisnard S, Mazel D. 2005. Comparative study of class 1 integron and Vibrio cholerae superintegron integrase activities. J Bacteriol 187:1740-1750.
-
(2005)
J Bacteriol
, vol.187
, pp. 1740-1750
-
-
Biskri, L.1
Bouvier, M.2
Guérout, A.M.3
Boisnard, S.4
Mazel, D.5
-
38
-
-
0030698334
-
Structure and function of 59-base element recombination sites associated with mobile gene cassettes
-
Stokes HW, O'Gorman DB, Recchia GD, Parsekhian M, Hall RM. 1997. Structure and function of 59-base element recombination sites associated with mobile gene cassettes. Mol Microbiol 26:731-745.
-
(1997)
Mol Microbiol
, vol.26
, pp. 731-745
-
-
Stokes, H.W.1
O'Gorman, D.B.2
Recchia, G.D.3
Parsekhian, M.4
Hall, R.M.5
-
39
-
-
0025915621
-
Site-specific insertion of genes into integrons: role of the 59-base element and determination of the recombination cross-over point
-
Hall RM, Brookes DE, Stokes HW. 1991. Site-specific insertion of genes into integrons: role of the 59-base element and determination of the recombination cross-over point. Mol Microbiol 5:1941-1959.
-
(1991)
Mol Microbiol
, vol.5
, pp. 1941-1959
-
-
Hall, R.M.1
Brookes, D.E.2
Stokes, H.W.3
-
40
-
-
0032730443
-
The IntI1 integron integrase preferentially binds single-stranded DNA of the attC site
-
Francia MV, Zabala JC, de la Cruz F, García Lobo JM. 1999. The IntI1 integron integrase preferentially binds single-stranded DNA of the attC site. J Bacteriol 181:6844-6849.
-
(1999)
J Bacteriol
, vol.181
, pp. 6844-6849
-
-
Francia, M.V.1
Zabala, J.C.2
de la Cruz, F.3
García Lobo, J.M.4
-
42
-
-
29244454620
-
Integron cassette insertion: a recombination process involving a folded single strand substrate
-
Bouvier M, Demarre G, Mazel D. 2005. Integron cassette insertion: a recombination process involving a folded single strand substrate. EMBO J 24:4356-4367.
-
(2005)
EMBO J
, vol.24
, pp. 4356-4367
-
-
Bouvier, M.1
Demarre, G.2
Mazel, D.3
-
43
-
-
70349678710
-
Structural features of single-stranded integron cassette attC sites and their role in strand selection
-
Bouvier M, Ducos-Galand M, Loot C, Bikard D, Mazel D. 2009. Structural features of single-stranded integron cassette attC sites and their role in strand selection. PLoS Genetics 5:e1000632.
-
(2009)
PLoS Genetics
, vol.5
-
-
Bouvier, M.1
Ducos-Galand, M.2
Loot, C.3
Bikard, D.4
Mazel, D.5
-
44
-
-
33646337441
-
Structural basis for broad DNA-specificity in integron recombination
-
MacDonald D, Demarre G, Bouvier M, Mazel D, Gopaul DN. 2006. Structural basis for broad DNA-specificity in integron recombination. Nature 440:1157-1162.
-
(2006)
Nature
, vol.440
, pp. 1157-1162
-
-
MacDonald, D.1
Demarre, G.2
Bouvier, M.3
Mazel, D.4
Gopaul, D.N.5
-
45
-
-
77955417926
-
Cellular pathways controlling integron cassette site folding
-
Loot C, Bikard D, Rachlin A, Mazel D. 2010. Cellular pathways controlling integron cassette site folding. EMBO J 29:2623-2634.
-
(2010)
EMBO J
, vol.29
, pp. 2623-2634
-
-
Loot, C.1
Bikard, D.2
Rachlin, A.3
Mazel, D.4
-
46
-
-
0038659759
-
Similarities and differences among 105 members of the Int family of site-specific recombinases
-
Nunes-Düby SE, Kwon HJ, Tirumalai RS, Ellenberger T, Landy A. 1998. Similarities and differences among 105 members of the Int family of site-specific recombinases. Nucleic Acids Res 26:391-406.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 391-406
-
-
Nunes-Düby, S.E.1
Kwon, H.J.2
Tirumalai, R.S.3
Ellenberger, T.4
Landy, A.5
-
47
-
-
60349117754
-
Genomic islands are dynamic, ancient integrative elements in bacterial evolution
-
Boyd EF, Almagro-Moreno S, Parent MA. 2009. Genomic islands are dynamic, ancient integrative elements in bacterial evolution. Trends Microbiol 17:47-53.
-
(2009)
Trends Microbiol
, vol.17
, pp. 47-53
-
-
Boyd, E.F.1
Almagro-Moreno, S.2
Parent, M.A.3
-
49
-
-
0034748934
-
Integron integrases possess a unique additional domain necessary for activity
-
Messier N, Roy PH. 2001. Integron integrases possess a unique additional domain necessary for activity. J Bacteriol 183:6699-6706.
-
(2001)
J Bacteriol
, vol.183
, pp. 6699-6706
-
-
Messier, N.1
Roy, P.H.2
-
50
-
-
36148954712
-
Identification of key structural determinants of the IntI1 integron integrase that influence attC×attI1 recombination efficiency
-
Demarre G, Frumerie C, Gopaul DN, Mazel D. 2007. Identification of key structural determinants of the IntI1 integron integrase that influence attC×attI1 recombination efficiency. Nucleic Acids Res 35:6475-6489.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 6475-6489
-
-
Demarre, G.1
Frumerie, C.2
Gopaul, D.N.3
Mazel, D.4
-
51
-
-
0031683105
-
Point mutations in the integron integrase IntI1 that affect recombination and/or substrate recognition
-
Gravel A, Messier N, Roy PH. 1998. Point mutations in the integron integrase IntI1 that affect recombination and/or substrate recognition. J Bacteriol 180:5437-5442.
-
(1998)
J Bacteriol
, vol.180
, pp. 5437-5442
-
-
Gravel, A.1
Messier, N.2
Roy, P.H.3
-
52
-
-
64549154463
-
Mutagenesis and homology modeling of the Tn21 integron integrase IntI1
-
Johansson C, Boukharta L, Eriksson J, Aqvist J, Sundström L. 2009. Mutagenesis and homology modeling of the Tn21 integron integrase IntI1. Biochemistry 48:1743-1753.
-
(2009)
Biochemistry
, vol.48
, pp. 1743-1753
-
-
Johansson, C.1
Boukharta, L.2
Eriksson, J.3
Aqvist, J.4
Sundström, L.5
-
53
-
-
23744489154
-
The single-stranded genome of phage CTX is the form used for integration into the genome of Vibrio cholerae
-
Val ME, Bouvier M, Campos J, Sherratt D, Cornet F, Mazel D, Barre FX. 2005. The single-stranded genome of phage CTX is the form used for integration into the genome of Vibrio cholerae. Mol Cell 19:559-566.
-
(2005)
Mol Cell
, vol.19
, pp. 559-566
-
-
Val, M.E.1
Bouvier, M.2
Campos, J.3
Sherratt, D.4
Cornet, F.5
Mazel, D.6
Barre, F.X.7
-
54
-
-
84866948138
-
Replicative resolution of integron cassette insertion
-
Loot C, Ducos-Galand M, Escudero JA, Bouvier M, Mazel D. 2012. Replicative resolution of integron cassette insertion. Nucleic Acids Res 40:8361-8370.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 8361-8370
-
-
Loot, C.1
Ducos-Galand, M.2
Escudero, J.A.3
Bouvier, M.4
Mazel, D.5
-
55
-
-
84893009429
-
The integron integrase efficiently prevents the melting effect of Escherichia coli single-stranded DNA-binding protein on folded attC sites
-
Loot C, Parissi V, Escudero JA, Amarir-Bouhram J, Bikard D, Mazel D. 2014. The integron integrase efficiently prevents the melting effect of Escherichia coli single-stranded DNA-binding protein on folded attC sites. J Bacteriol 196:762-771.
-
(2014)
J Bacteriol
, vol.196
, pp. 762-771
-
-
Loot, C.1
Parissi, V.2
Escudero, J.A.3
Amarir-Bouhram, J.4
Bikard, D.5
Mazel, D.6
-
56
-
-
0027255373
-
Site-specific insertion of gene cassettes into integrons
-
Collis CM, Grammaticopoulos G, Briton J, Stokes HW, Hall RM. 1993. Site-specific insertion of gene cassettes into integrons. Mol Microbiol 9:41-52.
-
(1993)
Mol Microbiol
, vol.9
, pp. 41-52
-
-
Collis, C.M.1
Grammaticopoulos, G.2
Briton, J.3
Stokes, H.W.4
Hall, R.M.5
-
57
-
-
0035091147
-
Efficiency of recombination reactions catalyzed by class 1 integron integrase IntI1
-
Collis CM, Recchia GD, Kim MJ, Stokes HW, Hall RM. 2001. Efficiency of recombination reactions catalyzed by class 1 integron integrase IntI1. J Bacteriol 183:2535-2542.
-
(2001)
J Bacteriol
, vol.183
, pp. 2535-2542
-
-
Collis, C.M.1
Recchia, G.D.2
Kim, M.J.3
Stokes, H.W.4
Hall, R.M.5
-
58
-
-
78149442895
-
Conjugative DNA transfer induces the bacterial SOS response and promotes antibiotic resistance development through integron activation
-
Baharoglu Z, Bikard D, Mazel D. 2010. Conjugative DNA transfer induces the bacterial SOS response and promotes antibiotic resistance development through integron activation. PLoS Genet 6:e1001165.
-
(2010)
PLoS Genet
, vol.6
-
-
Baharoglu, Z.1
Bikard, D.2
Mazel, D.3
-
59
-
-
0026549139
-
Site-specific deletion and rearrangement of integron insert genes catalyzed by the integron DNA integrase
-
Collis CM, Hall RM. 1992. Site-specific deletion and rearrangement of integron insert genes catalyzed by the integron DNA integrase. J Bacteriol 174:1574-1585.
-
(1992)
J Bacteriol
, vol.174
, pp. 1574-1585
-
-
Collis, C.M.1
Hall, R.M.2
-
60
-
-
27644585169
-
Recombination between the dfrA12-orfF-aadA2 cassette array and an aadA1 gene cassette creates a hybrid cassette, aadA8b
-
Gestal AM, Stokes HW, Partridge SR, Hall RM. 2005. Recombination between the dfrA12-orfF-aadA2 cassette array and an aadA1 gene cassette creates a hybrid cassette, aadA8b. Antimicrob Agents Chemother 49: 4771-4774.
-
(2005)
Antimicrob Agents Chemother
, vol.49
, pp. 4771-4774
-
-
Gestal, A.M.1
Stokes, H.W.2
Partridge, S.R.3
Hall, R.M.4
-
61
-
-
0030700665
-
Non-palindromic attl sites of integrons are capable of site-specific recombination with one another and with secondary targets
-
Hansson K, Sköld O, Sundström L. 1997. Non-palindromic attl sites of integrons are capable of site-specific recombination with one another and with secondary targets. Mol Microbiol 26:441-453.
-
(1997)
Mol Microbiol
, vol.26
, pp. 441-453
-
-
Hansson, K.1
Sköld, O.2
Sundström, L.3
-
62
-
-
71249117862
-
Tn6060, a transposon from a genomic island in a Pseudomonas aeruginosa clinical isolate that includes two class 1 integrons
-
Roy Chowdhury P, Merlino J, Labbate M, Cheong EY, Gottlieb T, Stokes HW. 2009. Tn6060, a transposon from a genomic island in a Pseudomonas aeruginosa clinical isolate that includes two class 1 integrons. Antimicrob Agents Chemother 53:5294-5296.
-
(2009)
Antimicrob Agents Chemother
, vol.53
, pp. 5294-5296
-
-
Roy Chowdhury, P.1
Merlino, J.2
Labbate, M.3
Cheong, E.Y.4
Gottlieb, T.5
Stokes, H.W.6
-
63
-
-
24644432438
-
Genetic basis for dissemination of armA
-
González-Zorn B, Catalan A, Escudero JA, Domínguez L, Teshager T, Porrero C, Moreno MA. 2005. Genetic basis for dissemination of armA. J Antimicrob Chemother 56:583-585.
-
(2005)
J Antimicrob Chemother
, vol.56
, pp. 583-585
-
-
González-Zorn, B.1
Catalan, A.2
Escudero, J.A.3
Domínguez, L.4
Teshager, T.5
Porrero, C.6
Moreno, M.A.7
-
64
-
-
0028928172
-
Plasmid evolution by acquisition of mobile gene cassettes: plasmid pIE723 contains the aadB gene cassette precisely inserted at a secondary site in the incQ plasmid RSF1010
-
Recchia GD, Hall RM. 1995. Plasmid evolution by acquisition of mobile gene cassettes: plasmid pIE723 contains the aadB gene cassette precisely inserted at a secondary site in the incQ plasmid RSF1010. Mol Microbiol 15:179-187.
-
(1995)
Mol Microbiol
, vol.15
, pp. 179-187
-
-
Recchia, G.D.1
Hall, R.M.2
-
65
-
-
0032843499
-
Reconstruction of an active integron recombination site after integration of a gene cassette at a secondary site
-
Segal H, Francia MV, Lobo JM, Elisha G. 1999. Reconstruction of an active integron recombination site after integration of a gene cassette at a secondary site. Antimicrob Agents Chemother 43:2538-2541.
-
(1999)
Antimicrob Agents Chemother
, vol.43
, pp. 2538-2541
-
-
Segal, H.1
Francia, M.V.2
Lobo, J.M.3
Elisha, G.4
-
66
-
-
66949174033
-
Translation regulation of integrons gene cassette expression by the attC sites
-
Jacquier H, Zaoui C, Sanson-le Pors MJ, Mazel D, Berçot B. 2009. Translation regulation of integrons gene cassette expression by the attC sites. Mol Microbiol 72:1475-1486.
-
(2009)
Mol Microbiol
, vol.72
, pp. 1475-1486
-
-
Jacquier, H.1
Zaoui, C.2
Sanson-le Pors, M.J.3
Mazel, D.4
Berçot, B.5
-
68
-
-
0036224655
-
An intrinsic control element for translational initiation in class 1 integrons
-
Hanau-Berçot B, Podglajen I, Casin I, Collatz E. 2002. An intrinsic control element for translational initiation in class 1 integrons. Mol Microbiol 44:119-130.
-
(2002)
Mol Microbiol
, vol.44
, pp. 119-130
-
-
Hanau-Berçot, B.1
Podglajen, I.2
Casin, I.3
Collatz, E.4
-
69
-
-
0025893384
-
Characterization of the nonenzymatic chloramphenicol resistance (cmlA) gene of the In4 integron of Tn1696: similarity of the product to transmembrane transport proteins
-
Bissonnette L, Champetier S, Buisson JP, Roy PH. 1991. Characterization of the nonenzymatic chloramphenicol resistance (cmlA) gene of the In4 integron of Tn1696: similarity of the product to transmembrane transport proteins. J Bacteriol 173:4493-4502.
-
(1991)
J Bacteriol
, vol.173
, pp. 4493-4502
-
-
Bissonnette, L.1
Champetier, S.2
Buisson, J.P.3
Roy, P.H.4
-
70
-
-
0025744955
-
Sequence analysis of the inducible chloramphenicol resistance determinant in the Tn1696 integron suggests regulation by translational attenuation
-
Stokes HW, Hall RM. 1991. Sequence analysis of the inducible chloramphenicol resistance determinant in the Tn1696 integron suggests regulation by translational attenuation. Plasmid 26:10-19.
-
(1991)
Plasmid
, vol.26
, pp. 10-19
-
-
Stokes, H.W.1
Hall, R.M.2
-
71
-
-
0141959261
-
Erythromycin esterase gene ere(A) is located in a functional gene cassette in an unusual class 2 integron
-
Biskri L, Mazel D. 2003. Erythromycin esterase gene ere(A) is located in a functional gene cassette in an unusual class 2 integron. Antimicrob Agents Chemother 47:3326-3331.
-
(2003)
Antimicrob Agents Chemother
, vol.47
, pp. 3326-3331
-
-
Biskri, L.1
Mazel, D.2
-
72
-
-
84861151983
-
Functional characterization of a Cassette-specific promoter in the class 1 integron-associated qnrVC1 gene
-
da Fonseca ÉL, Vicente AC. 2012. Functional characterization of a Cassette-specific promoter in the class 1 integron-associated qnrVC1 gene. Antimicrob Agents Chemother 56:3392-3394.
-
(2012)
Antimicrob Agents Chemother
, vol.56
, pp. 3392-3394
-
-
da Fonseca, É.L.1
Vicente, A.C.2
-
73
-
-
33947330447
-
Chromosomal toxin-antitoxin loci can diminish large-scale genome reductions in the absence of selection
-
Szekeres S, Dauti M, Wilde C, Mazel D, Rowe-Magnus DA. 2007. Chromosomal toxin-antitoxin loci can diminish large-scale genome reductions in the absence of selection. Mol Microbiol 63:1588-1605.
-
(2007)
Mol Microbiol
, vol.63
, pp. 1588-1605
-
-
Szekeres, S.1
Dauti, M.2
Wilde, C.3
Mazel, D.4
Rowe-Magnus, D.A.5
-
74
-
-
84877983947
-
Characterization of the phd-doc and ccd toxin-antitoxin cassettes from Vibrio superintegrons
-
Guérout AM, Iqbal N, Mine N, Ducos-Galand M, Van Melderen L, Mazel D. 2013. Characterization of the phd-doc and ccd toxin-antitoxin cassettes from Vibrio superintegrons. J Bacteriol 195:2270-2283.
-
(2013)
J Bacteriol
, vol.195
, pp. 2270-2283
-
-
Guérout, A.M.1
Iqbal, N.2
Mine, N.3
Ducos-Galand, M.4
Van Melderen, L.5
Mazel, D.6
-
75
-
-
34547665122
-
Novel and diverse integron integrase genes and integron-like gene cassettes are prevalent in deep-sea hydrothermal vents
-
Elsaied H, Stokes HW, Nakamura T, Kitamura K, Fuse H, Maruyama A. 2007. Novel and diverse integron integrase genes and integron-like gene cassettes are prevalent in deep-sea hydrothermal vents. Environ Microbiol 9:2298-2312.
-
(2007)
Environ Microbiol
, vol.9
, pp. 2298-2312
-
-
Elsaied, H.1
Stokes, H.W.2
Nakamura, T.3
Kitamura, K.4
Fuse, H.5
Maruyama, A.6
-
76
-
-
0035514941
-
Gene cassette PCR: sequence-independent recovery of entire genes from environmental DNA
-
Stokes HW, Holmes AJ, Nield BS, Holley MP, Nevalainen KM, Mabbutt BC, Gillings MR. 2001. Gene cassette PCR: sequence-independent recovery of entire genes from environmental DNA. Appl Environ Microbiol 67:5240-5246.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 5240-5246
-
-
Stokes, H.W.1
Holmes, A.J.2
Nield, B.S.3
Holley, M.P.4
Nevalainen, K.M.5
Mabbutt, B.C.6
Gillings, M.R.7
-
77
-
-
40949125756
-
Integron-associated gene cassettes in Halifax Harbour: assessment of a mobile gene pool in marine sediments
-
Koenig JE, Boucher Y, Charlebois RL, Nesbø C, Zhaxybayeva O, Bapteste E, Spencer M, Joss MJ, Stokes HW, Doolittle WF. 2008. Integron-associated gene cassettes in Halifax Harbour: assessment of a mobile gene pool in marine sediments. Environ Microbiol 10:1024-1038.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1024-1038
-
-
Koenig, J.E.1
Boucher, Y.2
Charlebois, R.L.3
Nesbø, C.4
Zhaxybayeva, O.5
Bapteste, E.6
Spencer, M.7
Joss, M.J.8
Stokes, H.W.9
Doolittle, W.F.10
-
78
-
-
67649230578
-
Evidence for dynamic exchange of qac gene cassettes between class 1 integrons and other integrons in freshwater biofilms
-
Gillings MR, Holley MP, Stokes HW. 2009. Evidence for dynamic exchange of qac gene cassettes between class 1 integrons and other integrons in freshwater biofilms. FEMS Microbiol Lett 296:282-288.
-
(2009)
FEMS Microbiol Lett
, vol.296
, pp. 282-288
-
-
Gillings, M.R.1
Holley, M.P.2
Stokes, H.W.3
-
79
-
-
0037737997
-
The gene cassette metagenome is a basic resource for bacterial genome evolution
-
Holmes AJ, Gillings MR, Nield BS, Mabbutt BC, Nevalainen KM, Stokes HW. 2003. The gene cassette metagenome is a basic resource for bacterial genome evolution. Environ Microbiol 5:383-394.
-
(2003)
Environ Microbiol
, vol.5
, pp. 383-394
-
-
Holmes, A.J.1
Gillings, M.R.2
Nield, B.S.3
Mabbutt, B.C.4
Nevalainen, K.M.5
Stokes, H.W.6
-
80
-
-
47249130872
-
The evolution of class 1 integrons and the rise of antibiotic resistance
-
Gillings M, Boucher Y, Labbate M, Holmes A, Krishnan S, Holley M, Stokes HW. 2008. The evolution of class 1 integrons and the rise of antibiotic resistance. J Bacteriol 190:5095-5100.
-
(2008)
J Bacteriol
, vol.190
, pp. 5095-5100
-
-
Gillings, M.1
Boucher, Y.2
Labbate, M.3
Holmes, A.4
Krishnan, S.5
Holley, M.6
Stokes, H.W.7
-
82
-
-
84892140586
-
The function of integron-associated gene cassettes in Vibrio species: the tip of the iceberg
-
Rapa RA, Labbate M. 2013. The function of integron-associated gene cassettes in Vibrio species: the tip of the iceberg. Front Microbiol 4:385.
-
(2013)
Front Microbiol
, vol.4
, pp. 385
-
-
Rapa, R.A.1
Labbate, M.2
-
84
-
-
80755144025
-
Toxin-antitoxin systems in bacteria and archaea
-
Yamaguchi Y, Park JH, Inouye M. 2011. Toxin-antitoxin systems in bacteria and archaea. Annu Rev Genet 45:61-79.
-
(2011)
Annu Rev Genet
, vol.45
, pp. 61-79
-
-
Yamaguchi, Y.1
Park, J.H.2
Inouye, M.3
-
85
-
-
63449102873
-
Bacterial toxin-antitoxin systems: more than selfish entities?
-
Van Melderen L, Saavedra De Bast M. 2009. Bacterial toxin-antitoxin systems: more than selfish entities? PLoS Genetics 5:e1000437.
-
(2009)
PLoS Genetics
, vol.5
-
-
Van Melderen, L.1
Saavedra De Bast, M.2
-
86
-
-
84876095374
-
Discovery of functional toxin/antitoxin systems in bacteria by shotgun cloning
-
Sberro H, Leavitt A, Kiro R, Koh E, Peleg Y, Qimron U, Sorek R. 2013. Discovery of functional toxin/antitoxin systems in bacteria by shotgun cloning. Molecular Cell 50:136-148.
-
(2013)
Molecular Cell
, vol.50
, pp. 136-148
-
-
Sberro, H.1
Leavitt, A.2
Kiro, R.3
Koh, E.4
Peleg, Y.5
Qimron, U.6
Sorek, R.7
-
88
-
-
64549119505
-
INTEGRALL: a database and search engine for integrons, integrases and gene cassettes
-
Moura A, Soares M, Pereira C, Leitão N, Henriques I, Correia A. 2009. INTEGRALL: a database and search engine for integrons, integrases and gene cassettes. Bioinformatics 25:1096-1098.
-
(2009)
Bioinformatics
, vol.25
, pp. 1096-1098
-
-
Moura, A.1
Soares, M.2
Pereira, C.3
Leitão, N.4
Henriques, I.5
Correia, A.6
-
89
-
-
65449141689
-
ACID: annotation of cassette and integron data
-
Joss MJ, Koenig JE, Labbate M, Polz MF, Gillings MR, Stokes HW, Doolittle WF, Boucher Y. 2009. ACID: annotation of cassette and integron data. BMC Bioinformatics 10:118.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 118
-
-
Joss, M.J.1
Koenig, J.E.2
Labbate, M.3
Polz, M.F.4
Gillings, M.R.5
Stokes, H.W.6
Doolittle, W.F.7
Boucher, Y.8
-
91
-
-
77953555431
-
Development of simple and rapid PCR-fingerprinting methods for Vibrio cholerae on the basis of genetic diversity of the superintegron
-
Chowdhury N, Asakura M, Neogi SB, Hinenoya A, Haldar S, Ramamurthy T, Sarkar BL, Faruque SM, Yamasaki S. 2010. Development of simple and rapid PCR-fingerprinting methods for Vibrio cholerae on the basis of genetic diversity of the superintegron. J Appl Microbiol 109:304-312.
-
(2010)
J Appl Microbiol
, vol.109
, pp. 304-312
-
-
Chowdhury, N.1
Asakura, M.2
Neogi, S.B.3
Hinenoya, A.4
Haldar, S.5
Ramamurthy, T.6
Sarkar, B.L.7
Faruque, S.M.8
Yamasaki, S.9
-
92
-
-
58149250207
-
A recalibrated molecular clock and independent origins for the cholera pandemic clones
-
Feng L, Reeves PR, Lan R, Ren Y, Gao C, Zhou Z, Cheng J, Wang W, Wang J, Qian W, Li D, Wang L. 2008. A recalibrated molecular clock and independent origins for the cholera pandemic clones. PloS One 3:e4053.
-
(2008)
PloS One
, vol.3
-
-
Feng, L.1
Reeves, P.R.2
Lan, R.3
Ren, Y.4
Gao, C.5
Zhou, Z.6
Cheng, J.7
Wang, W.8
Wang, J.9
Qian, W.10
Li, D.11
Wang, L.12
-
93
-
-
34249103696
-
Use of chromosomal integron arrays as a phylogenetic typing system for Vibrio cholerae pandemic strains
-
LabbateM, BoucherY, Joss MJ, Michael CA, GillingsMR, StokesHW. 2007. Use of chromosomal integron arrays as a phylogenetic typing system for Vibrio cholerae pandemic strains. Microbiology 153:1488-1498.
-
(2007)
Microbiology
, vol.153
, pp. 1488-1498
-
-
Labbate, M.1
Boucher, Y.2
Joss, M.J.3
Michael, C.A.4
Gillings, M.R.5
Stokes, H.W.6
-
94
-
-
35449007348
-
Aeons of distress: an evolutionary perspective on the bacterial SOS response
-
Erill I, Campoy S, Barbé J. 2007. Aeons of distress: an evolutionary perspective on the bacterial SOS response. FEMS Microbiol Rev 31:637-656.
-
(2007)
FEMS Microbiol Rev
, vol.31
, pp. 637-656
-
-
Erill, I.1
Campoy, S.2
Barbé, J.3
-
95
-
-
66249143446
-
The SOS response controls integron recombination
-
Guerin E, Cambray G, Sanchez-Alberola N, Campoy S, Erill I, Da Re S, Gonzalez-Zorn B, Barbe J, Ploy MC, Mazel D. 2009. The SOS response controls integron recombination. Science 324:1034.
-
(2009)
Science
, vol.324
, pp. 1034
-
-
Guerin, E.1
Cambray, G.2
Sanchez-Alberola, N.3
Campoy, S.4
Erill, I.5
Da Re, S.6
Gonzalez-Zorn, B.7
Barbe, J.8
Ploy, M.C.9
Mazel, D.10
-
96
-
-
80053586991
-
Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons
-
Cambray G, Sanchez-Alberola N, Campoy S, Guerin E, Da Re S, González-Zorn B, Ploy MC, Barbe J, Mazel D, Erill I. 2011. Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons. Mob DNA 2:6.
-
(2011)
Mob DNA
, vol.2
, pp. 6
-
-
Cambray, G.1
Sanchez-Alberola, N.2
Campoy, S.3
Guerin, E.4
Da Re, S.5
González-Zorn, B.6
Ploy, M.C.7
Barbe, J.8
Mazel, D.9
Erill, I.10
-
97
-
-
84901057236
-
Costly Class-1 integrons and the domestication of the the functional integrase
-
Harms K, Starikova I, Johnsen PJ. 2013. Costly Class-1 integrons and the domestication of the the functional integrase. Mobile Genetic Elements 3:e24774.
-
(2013)
Mobile Genetic Elements
, vol.3
-
-
Harms, K.1
Starikova, I.2
Johnsen, P.J.3
-
98
-
-
84870850472
-
A trade-offbetween the fitness cost of functional integrases and long-term stability of integrons
-
Starikova I, Harms K, Haugen P, Lunde T, Primicerio R, Samuelsen Ø, Nielsen KM, Johnsen PJ. 2012. A trade-offbetween the fitness cost of functional integrases and long-term stability of integrons. PLoS pathogens 8:e1003043.
-
(2012)
PLoS pathogens
, vol.8
-
-
Starikova, I.1
Harms, K.2
Haugen, P.3
Lunde, T.4
Primicerio, R.5
Samuelsen, Ø.6
Nielsen, K.M.7
Johnsen, P.J.8
-
99
-
-
79955527229
-
Vibrio cholerae triggers SOS and mutagenesis in response to a wide range of antibiotics: a route towards multiresistance
-
Baharoglu Z, Mazel D. 2011. Vibrio cholerae triggers SOS and mutagenesis in response to a wide range of antibiotics: a route towards multiresistance. Antimicrob Agents Chemother 55:2438-2441.
-
(2011)
Antimicrob Agents Chemother
, vol.55
, pp. 2438-2441
-
-
Baharoglu, Z.1
Mazel, D.2
-
100
-
-
84876837863
-
RpoS plays a central role in the SOS induction by sub-lethal aminoglycoside concentrations in Vibrio cholerae
-
Baharoglu Z, Krin E, Mazel D. 2013. RpoS plays a central role in the SOS induction by sub-lethal aminoglycoside concentrations in Vibrio cholerae. PLoS Genetics 9:e1003421.
-
(2013)
PLoS Genetics
, vol.9
-
-
Baharoglu, Z.1
Krin, E.2
Mazel, D.3
-
101
-
-
84875876463
-
β-Lactam antibiotics promote bacterial mutagenesis via an RpoS-mediated reduction in replication fidelity
-
Gutierrez A, Laureti L, Crussard S, Abida H, Rodríguez-Rojas A, Blázquez J, Baharoglu Z, Mazel D, Darfeuille F, Vogel J, Matic I. 2013. β-Lactam antibiotics promote bacterial mutagenesis via an RpoS-mediated reduction in replication fidelity. Nature Commun 4:1610.
-
(2013)
Nature Commun
, vol.4
, pp. 1610
-
-
Gutierrez, A.1
Laureti, L.2
Crussard, S.3
Abida, H.4
Rodríguez-Rojas, A.5
Blázquez, J.6
Baharoglu, Z.7
Mazel, D.8
Darfeuille, F.9
Vogel, J.10
Matic, I.11
-
102
-
-
84860321684
-
Connecting environment and genome plasticity in the characterization of transformation-induced SOS regulation and carbon catabolite control of the Vibrio cholerae integron integrase
-
Baharoglu Z, Krin E, Mazel D. 2012. Connecting environment and genome plasticity in the characterization of transformation-induced SOS regulation and carbon catabolite control of the Vibrio cholerae integron integrase. J Bacteriol 194:1659-1667.
-
(2012)
J Bacteriol
, vol.194
, pp. 1659-1667
-
-
Baharoglu, Z.1
Krin, E.2
Mazel, D.3
-
103
-
-
84897562688
-
The superintegron integrase and the cassette promoters are co-regulated in Vibrio cholerae
-
Krin E, Cambray G, Mazel D. 2014. The superintegron integrase and the cassette promoters are co-regulated in Vibrio cholerae. PLoS One 9: e91194.
-
(2014)
PLoS One
, vol.9
-
-
Krin, E.1
Cambray, G.2
Mazel, D.3
-
104
-
-
80053614916
-
High-level gene cassette transcription prevents integrase expression in class 1 integrons
-
Guérin E, Jové T, Tabesse A, Mazel D, Ploy MC. 2011. High-level gene cassette transcription prevents integrase expression in class 1 integrons. J Bacteriol 193:5675-5682.
-
(2011)
J Bacteriol
, vol.193
, pp. 5675-5682
-
-
Guérin, E.1
Jové, T.2
Tabesse, A.3
Mazel, D.4
Ploy, M.C.5
-
105
-
-
80255136146
-
Diversity of class 1 integron gene cassette Pc promoter variants in clinical Escherichia coli strains and description of a new P2 promoter variant
-
Vinué L, Jové T, Torres C, Ploy MC. 2011. Diversity of class 1 integron gene cassette Pc promoter variants in clinical Escherichia coli strains and description of a new P2 promoter variant. Int J Antimicrob Agents 38:526-529.
-
(2011)
Int J Antimicrob Agents
, vol.38
, pp. 526-529
-
-
Vinué, L.1
Jové, T.2
Torres, C.3
Ploy, M.C.4
-
106
-
-
84866166132
-
Diversity of gene cassette promoters in class 1 integrons from wastewater environments
-
Moura A, Jové T, Ploy MC, Henriques I, Correia A. 2012. Diversity of gene cassette promoters in class 1 integrons from wastewater environments. Appl Environ Microbiol 78:5413-5416.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 5413-5416
-
-
Moura, A.1
Jové, T.2
Ploy, M.C.3
Henriques, I.4
Correia, A.5
-
107
-
-
78650095891
-
Folded DNA in action: hairpin formation and biological functions in prokaryotes
-
Bikard D, Loot C, Baharoglu Z, Mazel D. 2010. Folded DNA in action: hairpin formation and biological functions in prokaryotes. Microbiol Mol BiolRev 74:570-588.
-
(2010)
Microbiol Mol BiolRev
, vol.74
, pp. 570-588
-
-
Bikard, D.1
Loot, C.2
Baharoglu, Z.3
Mazel, D.4
-
108
-
-
0026419949
-
Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli
-
Trinh TQ, Sinden RR. 1991. Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli. Nature 352: 544-547.
-
(1991)
Nature
, vol.352
, pp. 544-547
-
-
Trinh, T.Q.1
Sinden, R.R.2
-
109
-
-
33745920513
-
Antibiotic stress induces genetic transformability in the human pathogen Streptococcus pneumoniae
-
PrudhommeM, Attaiech L, Sanchez G, Martin B, Claverys JP. 2006. Antibiotic stress induces genetic transformability in the human pathogen Streptococcus pneumoniae. Science 313:89-92.
-
(2006)
Science
, vol.313
, pp. 89-92
-
-
Prudhomme, M.1
Attaiech, L.2
Sanchez, G.3
Martin, B.4
Claverys, J.P.5
-
110
-
-
84890924380
-
Environmental determinants of transformation efficiency in Helicobacter pylori
-
Moore ME, Lam A, Bhatnagar S, Solnick JV. 2014. Environmental determinants of transformation efficiency in Helicobacter pylori. J Bacteriol 196:337-344.
-
(2014)
J Bacteriol
, vol.196
, pp. 337-344
-
-
Moore, M.E.1
Lam, A.2
Bhatnagar, S.3
Solnick, J.V.4
-
111
-
-
0029762817
-
Inverted repeats, stem-loops, and cruciforms: significance for initiation of DNA replication
-
Pearson CE, Zorbas H, Price GB, Zannis-Hadjopoulos M. 1996. Inverted repeats, stem-loops, and cruciforms: significance for initiation of DNA replication. J Cell Biochem 63:1-22.
-
(1996)
J Cell Biochem
, vol.63
, pp. 1-22
-
-
Pearson, C.E.1
Zorbas, H.2
Price, G.B.3
Zannis-Hadjopoulos, M.4
-
112
-
-
0024563782
-
Formation of supercoiling domains in plasmid pBR322
-
Lodge JK, Kazic T, Berg DE. 1989. Formation of supercoiling domains in plasmid pBR322. J Bacteriol 171:2181-2187.
-
(1989)
J Bacteriol
, vol.171
, pp. 2181-2187
-
-
Lodge, J.K.1
Kazic, T.2
Berg, D.E.3
-
113
-
-
2642672756
-
Topoisomerase I mutants: the gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling
-
Pruss GJ, Drlica K. 1986. Topoisomerase I mutants: the gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling. Proc Natl Acad Sci USA 83:8952-8956.
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 8952-8956
-
-
Pruss, G.J.1
Drlica, K.2
-
114
-
-
0023433855
-
Supercoiling of the DNA template during transcription
-
Liu LF, Wang JC. 1987. Supercoiling of the DNA template during transcription. Proc Natl Acad Sci USA 84:7024-7027.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 7024-7027
-
-
Liu, L.F.1
Wang, J.C.2
-
115
-
-
0023430342
-
Changes in the linking number of supercoiled DNA accompany growth transitions in Escherichia coli
-
Balke VL, Gralla JD. 1987. Changes in the linking number of supercoiled DNA accompany growth transitions in Escherichia coli. J Bacteriol 169:4499-4506.
-
(1987)
J Bacteriol
, vol.169
, pp. 4499-4506
-
-
Balke, V.L.1
Gralla, J.D.2
-
116
-
-
0025785245
-
Topoisomerase mutants and physiological conditions control supercoiling and Z-DNA formation in vivo
-
Jaworski A, Higgins NP, Wells RD, Zacharias W. 1991. Topoisomerase mutants and physiological conditions control supercoiling and Z-DNA formation in vivo. J Biol Chem 266:2576-2581.
-
(1991)
J Biol Chem
, vol.266
, pp. 2576-2581
-
-
Jaworski, A.1
Higgins, N.P.2
Wells, R.D.3
Zacharias, W.4
-
118
-
-
33750962353
-
SOS repair and DNA supercoiling influence the genetic stability of DNA triplet repeats in Escherichia coli
-
Majchrzak M, Bowater RP, Staczek P, Parniewski P. 2006. SOS repair and DNA supercoiling influence the genetic stability of DNA triplet repeats in Escherichia coli. J Mol Biol 364:612-624.
-
(2006)
J Mol Biol
, vol.364
, pp. 612-624
-
-
Majchrzak, M.1
Bowater, R.P.2
Staczek, P.3
Parniewski, P.4
-
119
-
-
34547817672
-
Growth rate toxicity phenotypes and homeostatic supercoil control differentiate Escherichia coli from Salmonella enterica serovar Typhimurium
-
Champion K, Higgins NP. 2007. Growth rate toxicity phenotypes and homeostatic supercoil control differentiate Escherichia coli from Salmonella enterica serovar Typhimurium. J Bacteriol 189:5839-5849.
-
(2007)
J Bacteriol
, vol.189
, pp. 5839-5849
-
-
Champion, K.1
Higgins, N.P.2
-
120
-
-
0020455123
-
Precise and nearly-precise excision of the symmetrical inverted repeats of Tn5; common features of recA-independent deletion events in Escherichia coli
-
Collins J, Volckaert G, Nevers P. 1982. Precise and nearly-precise excision of the symmetrical inverted repeats of Tn5; common features of recA-independent deletion events in Escherichia coli. Gene 19:139-146.
-
(1982)
Gene
, vol.19
, pp. 139-146
-
-
Collins, J.1
Volckaert, G.2
Nevers, P.3
-
121
-
-
34147224324
-
The single-stranded DNA-binding protein of Escherichia coli
-
Meyer RR, Laine PS. 1990. The single-stranded DNA-binding protein of Escherichia coli. Microbiol Rev 54:342-380.
-
(1990)
Microbiol Rev
, vol.54
, pp. 342-380
-
-
Meyer, R.R.1
Laine, P.S.2
-
122
-
-
70350488396
-
SSB protein diffusion on single-stranded DNA stimulates RecA filament formation
-
Roy R, Kozlov AG, Lohman TM, Ha T. 2009. SSB protein diffusion on single-stranded DNA stimulates RecA filament formation. Nature 461:1092-1097.
-
(2009)
Nature
, vol.461
, pp. 1092-1097
-
-
Roy, R.1
Kozlov, A.G.2
Lohman, T.M.3
Ha, T.4
-
123
-
-
65349185511
-
In vitro recombination catalyzed by bacterial class 1 integron integrase IntI1 involves cooperative binding and specific oligomeric intermediates
-
Dubois V, Debreyer C, Quentin C, Parissi V. 2009. In vitro recombination catalyzed by bacterial class 1 integron integrase IntI1 involves cooperative binding and specific oligomeric intermediates. PloSOne 4:e5228.
-
(2009)
PloSOne
, vol.4
-
-
Dubois, V.1
Debreyer, C.2
Quentin, C.3
Parissi, V.4
-
124
-
-
44449163975
-
A new in vitro strand transfer assay for monitoring bacterial class 1 integron recombinase IntI1 activity
-
Dubois V, Debreyer C, Litvak S, Quentin C, Parissi V. 2007. A new in vitro strand transfer assay for monitoring bacterial class 1 integron recombinase IntI1 activity. PLoS One 2:e1315.
-
(2007)
PLoS One
, vol.2
-
-
Dubois, V.1
Debreyer, C.2
Litvak, S.3
Quentin, C.4
Parissi, V.5
-
125
-
-
34547126932
-
Escherichia coli PriA protein, two modes of DNA binding and activation of ATP hydrolysis
-
Tanaka T, Mizukoshi T, Sasaki K, Kohda D, Masai H. 2007. Escherichia coli PriA protein, two modes of DNA binding and activation of ATP hydrolysis. J Biol Chem 282:19917-19927.
-
(2007)
J Biol Chem
, vol.282
, pp. 19917-19927
-
-
Tanaka, T.1
Mizukoshi, T.2
Sasaki, K.3
Kohda, D.4
Masai, H.5
-
126
-
-
0038011248
-
Replication restart in gyrB Escherichia coli mutants
-
Grompone G, Ehrlich SD, Michel B. 2003. Replication restart in gyrB Escherichia coli mutants. Mol Microbiol 48:845-854.
-
(2003)
Mol Microbiol
, vol.48
, pp. 845-854
-
-
Grompone, G.1
Ehrlich, S.D.2
Michel, B.3
-
127
-
-
73049118635
-
Integrase-directed recovery of functional genes from genomic libraries
-
Rowe-Magnus DA. 2009. Integrase-directed recovery of functional genes from genomic libraries. Nucleic Acids Res 37:e118.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Rowe-Magnus, D.A.1
-
128
-
-
84872511962
-
Integron gene cassettes: a repository of novel protein folds with distinct interaction sites
-
Sureshan V, Deshpande CN, Boucher Y, Koenig JE, Midwest Center for Structural G, Stokes HW, Harrop SJ, Curmi PM, Mabbutt BC. 2013. Integron gene cassettes: a repository of novel protein folds with distinct interaction sites. PloS One 8:e52934.
-
(2013)
PloS One
, vol.8
-
-
Sureshan, V.1
Deshpande, C.N.2
Boucher, Y.3
Koenig, J.E.4
Stokes, H.W.5
Harrop, S.J.6
Curmi, P.M.7
Mabbutt, B.C.8
-
129
-
-
82555191271
-
Natural transformation with synthetic gene cassettes: new tools for integron research and biotechnology
-
Gestal AM, Liew EF, Coleman NV. 2011. Natural transformation with synthetic gene cassettes: new tools for integron research and biotechnology. Microbiology 157:3349-3360.
-
(2011)
Microbiology
, vol.157
, pp. 3349-3360
-
-
Gestal, A.M.1
Liew, E.F.2
Coleman, N.V.3
-
131
-
-
79960291267
-
Ecology and evolution as targets: the need for novel eco-evo drugs and strategies to fight antibiotic resistance
-
Baquero F, Coque TM, de la Cruz F. 2011. Ecology and evolution as targets: the need for novel eco-evo drugs and strategies to fight antibiotic resistance. Antimicrob Agents Chemother 55:3649-3660.
-
(2011)
Antimicrob Agents Chemother
, vol.55
, pp. 3649-3660
-
-
Baquero, F.1
Coque, T.M.2
de la Cruz, F.3
-
132
-
-
0037309129
-
Recombination activity of a distinctive integron-gene cassette system associated with Pseudomonas stutzeri populations in soil
-
Holmes AJ, Holley MP, Mahon A, Nield B, Gillings M, Stokes HW. 2003. Recombination activity of a distinctive integron-gene cassette system associated with Pseudomonas stutzeri populations in soil. J Bacteriol 185:918-928.
-
(2003)
J Bacteriol
, vol.185
, pp. 918-928
-
-
Holmes, A.J.1
Holley, M.P.2
Mahon, A.3
Nield, B.4
Gillings, M.5
Stokes, H.W.6
-
133
-
-
70349133579
-
Potential role of group IIC-attC introns in integron cassette formation
-
Leon G, Roy PH. 2009. Potential role of group IIC-attC introns in integron cassette formation. J Bacteriol 191:6040-6051.
-
(2009)
J Bacteriol
, vol.191
, pp. 6040-6051
-
-
Leon, G.1
Roy, P.H.2
-
134
-
-
67349109465
-
Using genomic data to determine the diversity and distribution of target site motifs recognized by class C-attC group II introns
-
Quiroga C, Centrón D. 2009. Using genomic data to determine the diversity and distribution of target site motifs recognized by class C-attC group II introns. J Mol Evol 68:539-549.
-
(2009)
J Mol Evol
, vol.68
, pp. 539-549
-
-
Quiroga, C.1
Centrón, D.2
|