-
1
-
-
28544451327
-
Foundations for engineering biology
-
Endy,D. (2005) Foundations for engineering biology. Nature, 438, 449-453.
-
(2005)
Nature
, vol.438
, pp. 449-453
-
-
Endy, D.1
-
2
-
-
0034688173
-
A synthetic oscillatory network of transcriptional regulators
-
Elowitz,M.B. and Leibler,S. (2000) A synthetic oscillatory network of transcriptional regulators. Nature, 403, 335-338.
-
(2000)
Nature
, vol.403
, pp. 335-338
-
-
Elowitz, M.B.1
Leibler, S.2
-
3
-
-
0034688174
-
Construction of a genetic toggle switch in Escherichia coli
-
Gardner,T.S., Cantor,C.R. and Collins,J.J. (2000) Construction of a genetic toggle switch in Escherichia coli. Nature, 403, 339-342.
-
(2000)
Nature
, vol.403
, pp. 339-342
-
-
Gardner, T.S.1
Cantor, C.R.2
Collins, J.J.3
-
4
-
-
66149172363
-
Diversity-based, model-guided construction of synthetic gene networks with predicted functions
-
Ellis,T., Wang,X. and Collins,J.J. (2009) Diversity-based, model-guided construction of synthetic gene networks with predicted functions. Nat. Biotech., 27, 465-471.
-
(2009)
Nat. Biotech.
, vol.27
, pp. 465-471
-
-
Ellis, T.1
Wang, X.2
Collins, J.J.3
-
5
-
-
36448988254
-
Predicting protein function from sequence and structure
-
Lee,D., Redfern,O. and Orengo,C. (2007) Predicting protein function from sequence and structure. Nat. Rev. Mol. Cell Biol., 8, 995-1005.
-
(2007)
Nat. Rev. Mol. Cell Biol.
, vol.8
, pp. 995-1005
-
-
Lee, D.1
Redfern, O.2
Orengo, C.3
-
6
-
-
0035014185
-
Directed evolution of proteins by exon shuffling
-
Kolkman,J.A. and Stemmer,W.P. (2001) Directed evolution of proteins by exon shuffling. Nat. Biotechnol., 19, 423-428.
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 423-428
-
-
Kolkman, J.A.1
Stemmer, W.P.2
-
7
-
-
57149092385
-
Synonymous genes explore different evolutionary landscapes
-
Cambray,G. and Mazel,D. (2008) Synonymous genes explore different evolutionary landscapes. PLoS Genet., 4, e1000256.
-
(2008)
PLoS Genet.
, vol.4
-
-
Cambray, G.1
Mazel, D.2
-
8
-
-
36249017917
-
Programming gene expression with combinatorial promoters
-
Cox,R.S., Surette,M.G. and Elowitz,M.B. (2007) Programming gene expression with combinatorial promoters. Mol. Syst. Biol., 3, 145.
-
(2007)
Mol. Syst. Biol.
, vol.3
, pp. 145
-
-
Cox, R.S.1
Surette, M.G.2
Elowitz, M.B.3
-
9
-
-
33747078696
-
Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes
-
Pfleger,B.F., Pitera,D.J., Smolke,C.D. and Keasling,J.D. (2006) Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes. Nat. Biotechnol., 24, 1027-1032.
-
(2006)
Nat. Biotechnol.
, vol.24
, pp. 1027-1032
-
-
Pfleger, B.F.1
Pitera, D.J.2
Smolke, C.D.3
Keasling, J.D.4
-
10
-
-
68949161807
-
Programming cells by multiplex genome engineering and accelerated evolution
-
Wang,H.H., Isaacs,F.J., Carr,P.A., Sun,Z.Z., Xu,G., Forest,C.R. and Church,G.M. (2009) Programming cells by multiplex genome engineering and accelerated evolution. Nature, 460, 894-898.
-
(2009)
Nature
, vol.460
, pp. 894-898
-
-
Wang, H.H.1
Isaacs, F.J.2
Carr, P.A.3
Sun, Z.Z.4
Xu, G.5
Forest, C.R.6
Church, G.M.7
-
11
-
-
34347364443
-
Integrons: mobilizable platforms that promote genetic diversity in bacteria
-
Boucher,Y., Koenig,J.E., Stokes,H.W. and Labbate,M. (2007) Integrons: mobilizable platforms that promote genetic diversity in bacteria. Trends Microbiol., 15, 301-309.
-
(2007)
Trends Microbiol.
, vol.15
, pp. 301-309
-
-
Boucher, Y.1
Koenig, J.E.2
Stokes, H.W.3
Labbate, M.4
-
12
-
-
33747183094
-
Integrons: agents of bacterial evolution
-
Mazel,D. (2006) Integrons: agents of bacterial evolution. Nat. Rev. Microbiol., 4, 608-620.
-
(2006)
Nat. Rev. Microbiol.
, vol.4
, pp. 608-620
-
-
Mazel, D.1
-
13
-
-
0029567996
-
Gene cassettes: a new class of mobile element
-
Recchia,G.D. and Hall,R.M. (1995) Gene cassettes: a new class of mobile element. Microbiology, 141, 3015-3027.
-
(1995)
Microbiology
, vol.141
, pp. 3015-3027
-
-
Recchia, G.D.1
Hall, R.M.2
-
14
-
-
66249143446
-
The SOS response controls integron recombination
-
Guerin,E., Barbé,J., Cambray,G., Ploy,M., Sanchez-Alberola,N., Campoy,S., Erill,I., Da Re,S., Gonzalez-Zorn,B. and Mazel,D. (2009) The SOS response controls integron recombination. Science, 324, 1034.
-
(2009)
Science
, vol.324
, pp. 1034
-
-
Guerin, E.1
Barbé, J.2
Cambray, G.3
Ploy, M.4
Sanchez-Alberola, N.5
Campoy, S.6
Erill, I.7
Da Re, S.8
Gonzalez-Zorn, B.9
Mazel, D.10
-
15
-
-
0036271891
-
Bacterial resistance evolution by recruitment of super-integron gene cassettes
-
Rowe-Magnus,D., Guerout,A. and Mazel,D. (2002) Bacterial resistance evolution by recruitment of super-integron gene cassettes. Mol. Microbiol., 43, 1657-1669.
-
(2002)
Mol. Microbiol.
, vol.43
, pp. 1657-1669
-
-
Rowe-Magnus, D.1
Guerout, A.2
Mazel, D.3
-
16
-
-
14644386907
-
A new family of mobilizable suicide plasmids based on broad host range R388 plasmid (IncW) and RP4 plasmid (IncPalpha) conjugative machineries and their cognate Escherichia coli host strains
-
Demarre,G., Guérout,A.M., Matsumoto-Mashimo,C., Rowe-Magnus,D.A., Marlière,P. and Mazel,D. (2005) A new family of mobilizable suicide plasmids based on broad host range R388 plasmid (IncW) and RP4 plasmid (IncPalpha) conjugative machineries and their cognate Escherichia coli host strains. Res. Microbiol., 156, 245-255.
-
(2005)
Res. Microbiol.
, vol.156
, pp. 245-255
-
-
Demarre, G.1
Guérout, A.M.2
Matsumoto-Mashimo, C.3
Rowe-Magnus, D.A.4
Marlière, P.5
Mazel, D.6
-
17
-
-
0034668869
-
A rapid method for efficient gene replacement in the filamentous fungus Aspergillus nidulans
-
Chaveroche,M.K., D'Enfert,C. and Ghigo,J.M. (2000) A rapid method for efficient gene replacement in the filamentous fungus Aspergillus nidulans. Nucleic Acids Res., 28, E97.
-
(2000)
Nucleic Acids Res.
, vol.28
-
-
Chaveroche, M.K.1
D'Enfert, C.2
Ghigo, J.M.3
-
18
-
-
0242659212
-
Cosmid-based system for transient expression and absolute off-to-on transcriptional control of Escherichia coli genes
-
Cronan,J.E. (2003) Cosmid-based system for transient expression and absolute off-to-on transcriptional control of Escherichia coli genes. J. Bacteriol., 185, 6522-6529.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 6522-6529
-
-
Cronan, J.E.1
-
19
-
-
9144264275
-
Macrodomain organization of the Escherichia coli chromosome
-
Valens,M., Penaud,S., Rossignol,M., Cornet,F. and Boccard,F. (2004) Macrodomain organization of the Escherichia coli chromosome. EMBO J., 23, 4330-4341.
-
(2004)
EMBO J.
, vol.23
, pp. 4330-4341
-
-
Valens, M.1
Penaud, S.2
Rossignol, M.3
Cornet, F.4
Boccard, F.5
-
20
-
-
0024444329
-
Evolution of a biosynthetic pathway: the tryptophan paradigm
-
Crawford,I. (1989) Evolution of a biosynthetic pathway: the tryptophan paradigm. Ann. Rev. Microbiol., 43, 567-600.
-
(1989)
Ann. Rev. Microbiol.
, vol.43
, pp. 567-600
-
-
Crawford, I.1
-
21
-
-
14244267061
-
Comparative study of class 1 integron and Vibrio cholerae superintegron integrase activities
-
Biskri,L., Bouvier,M., Guérout,A., Boisnard,S. and Mazel,D. (2005) Comparative study of class 1 integron and Vibrio cholerae superintegron integrase activities. J. Bacteriol., 187, 1740-1750.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 1740-1750
-
-
Biskri, L.1
Bouvier, M.2
Guérout, A.3
Boisnard, S.4
Mazel, D.5
-
22
-
-
0026294037
-
Nucleotide sequence and organization of genes flanking the transfer origin of promiscuous plasmid RP4
-
Ziegelin,G., Pansegrau,W., Strack,B., Balzer,D., Kröger,M., Kruft,V. and Lanka,E. (1991) Nucleotide sequence and organization of genes flanking the transfer origin of promiscuous plasmid RP4. DNA Seq. J. DNA Seq. Mapping, 1, 303-327.
-
(1991)
DNA Seq. J. DNA Seq. Mapping
, vol.1
, pp. 303-327
-
-
Ziegelin, G.1
Pansegrau, W.2
Strack, B.3
Balzer, D.4
Kröger, M.5
Kruft, V.6
Lanka, E.7
-
23
-
-
45149118469
-
Engineering BioBrick vectors from BioBrick parts
-
Shetty,R.P., Knight,T.F. and Endy,D. (2008) Engineering BioBrick vectors from BioBrick parts. J. Biol. Eng., 2,5.
-
(2008)
J. Biol. Eng.
, vol.2
, pp. 5
-
-
Shetty, R.P.1
Knight, T.F.2
Endy, D.3
-
24
-
-
0033978494
-
Indole-inducible proteins in bacteria suggest membrane and oxidant toxicity
-
Garbe,T.R., Kobayashi,M. and Yukawa,H. (2000) Indole-inducible proteins in bacteria suggest membrane and oxidant toxicity. Arch. Microbiol., 173, 78-82.
-
(2000)
Arch. Microbiol.
, vol.173
, pp. 78-82
-
-
Garbe, T.R.1
Kobayashi, M.2
Yukawa, H.3
-
25
-
-
77749270677
-
Ultrahigh-throughput screening in drop-based microfluidics for directed evolution
-
Agresti,J.J., Antipov,E., Abate,A.R., Ahn,K., Rowat,A.C., Baret,J., Marquez,M., Klibanov,A.M., Griffiths,A.D. and Weitz,D.A. (2010) Ultrahigh-throughput screening in drop-based microfluidics for directed evolution. Proc. Natl Acad. Sci. USA, 107, 4004-4009.
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 4004-4009
-
-
Agresti, J.J.1
Antipov, E.2
Abate, A.R.3
Ahn, K.4
Rowat, A.C.5
Baret, J.6
Marquez, M.7
Klibanov, A.M.8
Griffiths, A.D.9
Weitz, D.A.10
-
26
-
-
70149096883
-
Droplet microfluidic technology for single-cell high-throughput screening
-
Brouzes,E., Medkova,M., Savenelli,N., Marran,D., Twardowski,M., Hutchison,J.B., Rothberg,J.M., Link,D.R., Perrimon,N. and Samuels,M.L. (2009) Droplet microfluidic technology for single-cell high-throughput screening. Proc. Natl Acad. Sci. USA, 106, 14195-14200.
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 14195-14200
-
-
Brouzes, E.1
Medkova, M.2
Savenelli, N.3
Marran, D.4
Twardowski, M.5
Hutchison, J.B.6
Rothberg, J.M.7
Link, D.R.8
Perrimon, N.9
Samuels, M.L.10
-
27
-
-
29244454620
-
Integron cassette insertion: a recombination process involving a folded single strand substrate
-
Bouvier,M., Demarre,G. and Mazel,D. (2005) Integron cassette insertion: a recombination process involving a folded single strand substrate. EMBO J., 24, 4356-4367.
-
(2005)
EMBO J.
, vol.24
, pp. 4356-4367
-
-
Bouvier, M.1
Demarre, G.2
Mazel, D.3
-
28
-
-
77449086387
-
The relaxed requirements of the integron cleavage site allow predictable changes in integron target specificity
-
Frumerie,C., Ducos-Galand,M., Gopaul,D.N. and Mazel,D. (2010) The relaxed requirements of the integron cleavage site allow predictable changes in integron target specificity. Nucleic Acids Res., 38, 559-569.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 559-569
-
-
Frumerie, C.1
Ducos-Galand, M.2
Gopaul, D.N.3
Mazel, D.4
-
29
-
-
70349678710
-
Structural features of single-stranded integron cassette attC sites and their role in strand selection
-
Bouvier,M., Ducos-Galand,M., Loot,C., Bikard,D. and Mazel,D. (2009) Structural features of single-stranded integron cassette attC sites and their role in strand selection. PLoS Genet., 5, e1000632.
-
(2009)
PLoS Genet.
, vol.5
-
-
Bouvier, M.1
Ducos-Galand, M.2
Loot, C.3
Bikard, D.4
Mazel, D.5
-
30
-
-
33847608289
-
Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC
-
Li,M.Z. and Elledge,S.J. (2007) Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC. Nat. Methods, 4, 251-256.
-
(2007)
Nat. Methods
, vol.4
, pp. 251-256
-
-
Li, M.Z.1
Elledge, S.J.2
-
31
-
-
59649108349
-
DNA assembler, an in vivo genetic method for rapid construction of biochemical pathways
-
Shao,Z., Zhao,H. and Zhao,H. (2009) DNA assembler, an in vivo genetic method for rapid construction of biochemical pathways. Nucleic Acids Res., 37, e16.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Shao, Z.1
Zhao, H.2
Zhao, H.3
-
32
-
-
0035091147
-
Efficiency of recombination reactions catalyzed by class 1 integron integrase IntI1
-
Collis,C.M., Recchia,G.D., Kim,M., Stokes,H.W. and Hall,R.M. (2001) Efficiency of recombination reactions catalyzed by class 1 integron integrase IntI1. J. Bacteriol., 183, 2535-2542.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 2535-2542
-
-
Collis, C.M.1
Recchia, G.D.2
Kim, M.3
Stokes, H.W.4
Hall, R.M.5
|