-
1
-
-
0034682335
-
Lateral gene transfer and the nature of bacterial innovation
-
Ochman,H., Lawrence,J.G. and Groisman,E.A. (2000) Lateral gene transfer and the nature of bacterial innovation. Nature, 405, 299-304.
-
(2000)
Nature
, vol.405
, pp. 299-304
-
-
Ochman, H.1
Lawrence, J.G.2
Groisman, E.A.3
-
2
-
-
0005673882
-
Interaction of the bacteriophage P1 recombinase Cre with the recombining site loxP
-
Hoess,R.H. and Abremski,K. (1984) Interaction of the bacteriophage P1 recombinase Cre with the recombining site loxP. Proc. Natl Acad. Sci. USA, 81, 1026-1029.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 1026-1029
-
-
Hoess, R.H.1
Abremski, K.2
-
4
-
-
0024454281
-
Site-specific recombination by Tn3 resolvase
-
Stark,W.M., Boocock,M.R and Sherratt,D.J. (1989) Site-specific recombination by Tn3 resolvase. Trends Genet., 5, 304-309.
-
(1989)
Trends Genet.
, vol.5
, pp. 304-309
-
-
Stark, W.M.1
Boocock, M.R.2
Sherratt, D.J.3
-
5
-
-
0025148348
-
Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination
-
Echols,H. (1990) Nucleoprotein structures initiating DNA replication. transcription, and site-specific recombination. J. Biol. Chem., 265, 14697-14700.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 14697-14700
-
-
Echols, H.1
-
6
-
-
0030902817
-
Solving the cis/trans paradox in the Int family of recombinases
-
Mondragon,A. (1997) Solving the cis/trans paradox in the Int family of recombinases. Nature Struct. Biol., 4, 427-429.
-
(1997)
Nature Struct. Biol.
, vol.4
, pp. 427-429
-
-
Mondragon, A.1
-
7
-
-
0030816550
-
The integrase family of tyrosine recombinases: Evolution of a conserved active site domain
-
Esposito,D. and Scocca,J.J. (1997) The integrase family of tyrosine recombinases: evolution of a conserved active site domain. Nucleic Acids Res., 25, 3605-3614.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3605-3614
-
-
Esposito, D.1
Scocca, J.J.2
-
8
-
-
0038659759
-
Similarities and differences among 105 members of the Int family of site-specific recombinases
-
Nunes-Düby,S.E., Kwon,H.J., Tirumalai,R.S., Ellenberger,T. and Landy,A. (1998) Similarities and differences among 105 members of the Int family of site-specific recombinases. Nucleic Acids Res., 26, 391-406.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 391-406
-
-
Nunes-Düby, S.E.1
Kwon, H.J.2
Tirumalai, R.S.3
Ellenberger, T.4
Landy, A.5
-
9
-
-
0000078911
-
Site-specific recombination: Integration, excision, resolution, and inversion of defined DNA segments
-
Neidhardt,F.C. (ed.), 2nd edn. ASM Press, Washington, DC
-
Nash,H.A. (1996) Site-specific recombination: integration, excision, resolution, and inversion of defined DNA segments. In Neidhardt,F.C. (ed.), Escherichia coli and Salmonella: Cellular and Molecular Biology, 2nd edn. ASM Press, Washington, DC, pp. 2363-2376.
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology
, pp. 2363-2376
-
-
Nash, H.A.1
-
10
-
-
0019447996
-
A novel role for site-specific recombination in maintenance of bacterial replicons
-
Austin,S., Ziese,M. and Sternberg,N. (1981) A novel role for site-specific recombination in maintenance of bacterial replicons. Cell. 25, 729-736.
-
(1981)
Cell
, vol.25
, pp. 729-736
-
-
Austin, S.1
Ziese, M.2
Sternberg, N.3
-
11
-
-
0025945415
-
Escherichia coli XerC recombinase is required for chromosomal segregation at cell division
-
Blakely,G., Colloms,S., May,G., Burke,M. and Sherratt,D. (1991) Escherichia coli XerC recombinase is required for chromosomal segregation at cell division. New Biol., 3, 789-798.
-
(1991)
New Biol.
, vol.3
, pp. 789-798
-
-
Blakely, G.1
Colloms, S.2
May, G.3
Burke, M.4
Sherratt, D.5
-
12
-
-
0036161673
-
ResT, a telomere resolvase encoded by the Lyme disease spirochete
-
Kobryn,K. and Chaconas,G. (2002) ResT, a telomere resolvase encoded by the Lyme disease spirochete. Mol. Cell, 9, 195-201.
-
(2002)
Mol. Cell
, vol.9
, pp. 195-201
-
-
Kobryn, K.1
Chaconas, G.2
-
13
-
-
0023047203
-
Nucleotide sequence of the AAD(2″) aminoglycoside adenylyltransferase determinant aadB. Evolutionary relationship of this region with those surrounding aadA in R538-1 and dhfrII in R388
-
Cameron,F.H., Groot Obbink,D.J., Ackerman,V.P. and Hall,R.M. (1986) Nucleotide sequence of the AAD(2″) aminoglycoside adenylyltransferase determinant aadB. Evolutionary relationship of this region with those surrounding aadA in R538-1 and dhfrII in R388. Nucleic Acids Res., 14, 8625-8635.
-
(1986)
Nucleic Acids Res.
, vol.14
, pp. 8625-8635
-
-
Cameron, F.H.1
Groot Obbink, D.J.2
Ackerman, V.P.3
Hall, R.M.4
-
14
-
-
0023446033
-
Precise insertion of antibiotic resistance determinants into Tn21-like transposons: Nucleotide sequence of the OXA-1 beta-lactamase gene
-
Ouellette,M., Bissonnette,L. and Roy,P.H. (1987) Precise insertion of antibiotic resistance determinants into Tn21-like transposons: nucleotide sequence of the OXA-1 beta-lactamase gene. Proc. Natl Acad. Sci. USA, 84, 7378-7382.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 7378-7382
-
-
Ouellette, M.1
Bissonnette, L.2
Roy, P.H.3
-
15
-
-
0023747576
-
Site-specific recombination promotes linkage beween trimethoprim- and sulfonamide resistance genes. Sequence characterization of dhfrV and sull and a recombination active locus of Tn21
-
Sundström,L., Rådström,P., Swedberg,G. and Sköld,O. (1988). Site-specific recombination promotes linkage beween trimethoprim- and sulfonamide resistance genes. Sequence characterization of dhfrV and sull and a recombination active locus of Tn21. Mol. Gen. Genet., 213, 191-201.
-
(1988)
Mol. Gen. Genet.
, vol.213
, pp. 191-201
-
-
Sundström, L.1
Rådström, P.2
Swedberg, G.3
Sköld, O.4
-
16
-
-
0025274957
-
Genetic elements involved in Tn21 site-specific integration, a novel mechanism for the dissemination of antibiotic resistance genes
-
Martinez,E. and de la Cruz,F. (1990) Genetic elements involved in Tn21 site-specific integration, a novel mechanism for the dissemination of antibiotic resistance genes. EMBO J., 9, 1275-1281.
-
(1990)
EMBO J.
, vol.9
, pp. 1275-1281
-
-
Martinez, E.1
de la Cruz, F.2
-
17
-
-
0028962716
-
Mobile gene cassettes and integrons: Capture and spread of genes by site-specific recombination
-
Hall,R.M. and Collis,C.M. (1995) Mobile gene cassettes and integrons: capture and spread of genes by site-specific recombination. Mol. Microbiol., 15, 593-600.
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 593-600
-
-
Hall, R.M.1
Collis, C.M.2
-
18
-
-
0037439554
-
Multidrug resistance among Enterobacteriaceae is strongly associated with the presence of integrons and is independent of species or isolate origin
-
M T
-
Leverstein-van Hall,M.A., M Blok,H.E., T Donders,A.R., Paauw,A., Fluit,A.C. and Verhoef,J. (2003) Multidrug resistance among Enterobacteriaceae is strongly associated with the presence of integrons and is independent of species or isolate origin. J. Infect. Dis., 187, 251-259.
-
(2003)
J. Infect. Dis.
, vol.187
, pp. 251-259
-
-
Leverstein-van Hall, M.A.1
Blok, H.E.2
Donders, A.R.3
Paauw, A.4
Fluit, A.C.5
Verhoef, J.6
-
19
-
-
0023650411
-
Homology of ORFs from Tn2603 and from R46 to site-specific recombinases
-
Ouellette,M. and Roy,P.H. (1987) Homology of ORFs from Tn2603 and from R46 to site-specific recombinases. Nucleic Acids Res., 15, 10055.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 10055
-
-
Ouellette, M.1
Roy, P.H.2
-
20
-
-
0034748934
-
Integron integrases possess a unique additional domain necessary for activity
-
Messier,N. and Roy,P.H. (2001) Integron integrases possess a unique additional domain necessary for activity. J. Bacteriol., 183, 6699-6706.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6699-6706
-
-
Messier, N.1
Roy, P.H.2
-
21
-
-
0035895252
-
The evolutionary history of chromosomal super-integrons provides an ancestry for multiresistant integrons
-
Rowe-Magnus,D.A., Guerout,A.M., Ploncard,P., Dychinco,B., Davies,J. and Mazel,D. (2001). The evolutionary history of chromosomal super-integrons provides an ancestry for multiresistant integrons. Proc. Natl Acad. Sci. USA, 98, 652-657.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 652-657
-
-
Rowe-Magnus, D.A.1
Guerout, A.M.2
Ploncard, P.3
Dychinco, B.4
Davies, J.5
Mazel, D.6
-
22
-
-
0028335623
-
Characterization of specific and secondary recombination sites recognised by the integron DNA integrase
-
Recchia,G.D., Stokes,H.W. and Hall,R.M. (1994) Characterization of specific and secondary recombination sites recognised by the integron DNA integrase. Nucleic Acids Res., 22, 2071-2078.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 2071-2078
-
-
Recchia, G.D.1
Stokes, H.W.2
Hall, R.M.3
-
23
-
-
0030700665
-
Non-palindromic attl sites of integrons are capable of site-specific recombination with one another and with secondary targets
-
Hansson,K., Sköld,O. and Sundström,L. (1997) Non-palindromic attl sites of integrons are capable of site-specific recombination with one another and with secondary targets. Mol. Microbiol., 26, 441-453.
-
(1997)
Mol. Microbiol.
, vol.26
, pp. 441-453
-
-
Hansson, K.1
Sköld, O.2
Sundström, L.3
-
24
-
-
0027364146
-
Secondary sites for integration mediated by the Tn21 integrase
-
Francia,M.V., de la Cruz,F. and Garcia Lobo,J.M. (1993) Secondary sites for integration mediated by the Tn21 integrase. Mol. Microbiol., 10, 823-828.
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 823-828
-
-
Francia, M.V.1
de la Cruz, F.2
Garcia Lobo, J.M.3
-
25
-
-
0025915621
-
Site-specific insertion of genes into integrons: Role of the 59-base element and determination of the recombination cross-over point
-
Hall,R.M., Brookes,D.E. and Stokes,H.W. (1991) Site-specific insertion of genes into integrons: role of the 59-base element and determination of the recombination cross-over point. Mol. Microbiol., 5, 1941-1959.
-
(1991)
Mol. Microbiol.
, vol.5
, pp. 1941-1959
-
-
Hall, R.M.1
Brookes, D.E.2
Stokes, H.W.3
-
26
-
-
0030811372
-
A hot spot in plasmid F for site-specific recombination mediated by Tn21 integron integrase
-
Francia,M.V., Avila,P., de la Cruz,F. and Garcia Lobo,J.M. (1997) A hot spot in plasmid F for site-specific recombination mediated by Tn21 integron integrase. J. Bacteriol., 179, 4419-4425.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 4419-4425
-
-
Francia, M.V.1
Avila, P.2
de la Cruz, F.3
Garcia Lobo, J.M.4
-
27
-
-
0030698334
-
Structure and function of 59-base element recombination sites associated with mobile gene cassettes
-
Stokes,H.W., O'Gorman,D.B., Recchia,G.D., Parsekhian,M. and Hall,R.M. (1997) Structure and function of 59-base element recombination sites associated with mobile gene cassettes. Mol. Microbiol., 26, 731 745.
-
(1997)
Mol. Microbiol.
, vol.26
, pp. 731-745
-
-
Stokes, H.W.1
O'Gorman, D.B.2
Recchia, G.D.3
Parsekhian, M.4
Hall, R.M.5
-
28
-
-
85157986030
-
Gene acquisition in bacteria by integron-mediated site-specific recombination
-
Craig,N.L., Craigie,R., Gellert,M. and Lambowitz,A.M. (ed.), ASM Press, Washington, DC
-
Recchia,G.D. and Sherratt,D.J. (2002) Gene acquisition in bacteria by integron-mediated site-specific recombination. In Craig,N.L., Craigie,R., Gellert,M. and Lambowitz,A.M. (ed.), Mobile DNA II. ASM Press, Washington, DC, pp. 162 176.
-
(2002)
Mobile DNA II
, pp. 162-176
-
-
Recchia, G.D.1
Sherratt, D.J.2
-
29
-
-
0019456340
-
Structure of the cro repressor from bacteriophage lambda and its interaction with DNA
-
Anderson,W.F., Ohlendorf,D.H., Takeda,Y. and Matthews,B.W. (1981) Structure of the cro repressor from bacteriophage lambda and its interaction with DNA. Nature, 290, 754 758.
-
(1981)
Nature
, vol.290
, pp. 754-758
-
-
Anderson, W.F.1
Ohlendorf, D.H.2
Takeda, Y.3
Matthews, B.W.4
-
30
-
-
0034991483
-
A structural view of Cre-loxP site-specific recombination
-
Van Duyne,G.D. (2001) A structural view of Cre-loxP site-specific recombination. Annu. Rev. Biophys. Biomol. Struct., 30, 87 104.
-
(2001)
Annu. Rev. Biophys. Biomol. Struct.
, vol.30
, pp. 87-104
-
-
Van Duyne, G.D.1
-
31
-
-
0027422131
-
Synaptic intermediates in bacteriophage lambda site-specific recombination: Integrase can align pairs of attachment sites
-
Segall,A.M. and Nash,H.A. (1993) Synaptic intermediates in bacteriophage lambda site-specific recombination: integrase can align pairs of attachment sites. EMBO J. 12, 4567 4576.
-
(1993)
EMBO J.
, vol.12
, pp. 4567-4576
-
-
Segall, A.M.1
Nash, H.A.2
-
32
-
-
0032540301
-
Recognition of core binding sites by bacteriophage integrases
-
Dorgai,L., Sloan,S. and Weisberg,R.A. (1998) Recognition of core binding sites by bacteriophage integrases. J. Mol. Biol., 277, 1059 1070.
-
(1998)
J. Mol. Biol.
, vol.277
, pp. 1059-1070
-
-
Dorgai, L.1
Sloan, S.2
Weisberg, R.A.3
-
33
-
-
0027462796
-
The 3′ conserved segment of integrons contains a gene associated with multidrug resistance to antiseptics and disinfectants
-
Paulsen,I.T., Littlejohn,T.G., Radstrom,P., Sundstrom,L., Skold,O., Swedberg,G. and Skurray,R.A. (1993) The 3′ conserved segment of integrons contains a gene associated with multidrug resistance to antiseptics and disinfectants. Antimicrob. Agents Chemother., 37, 761 768.
-
(1993)
Antimicrob. Agents Chemother.
, vol.37
, pp. 761-768
-
-
Paulsen, I.T.1
Littlejohn, T.G.2
Radstrom, P.3
Sundstrom, L.4
Skold, O.5
Swedberg, G.6
Skurray, R.A.7
-
34
-
-
0037161811
-
Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
-
da Silva,A.C., Ferro,J.A., Reinach,F.C., Farah,C.S., Furlan,L.R., Quaggio,R.B., Monteiro-Vitorello,C.B., Van Sluys,M.A., Almeida,N.F., Alves,L.M. et al. (2002) Comparison of the genomes of two Xanthomonas pathogens with differing host specificities. Nature, 417, 459 463.
-
(2002)
Nature
, vol.417
, pp. 459-463
-
-
da Silva, A.C.1
Ferro, J.A.2
Reinach, F.C.3
Farah, C.S.4
Furlan, L.R.5
Quaggio, R.B.6
Monteiro-Vitorello, C.B.7
Van Sluys, M.A.8
Almeida, N.F.9
Alves, L.M.10
-
35
-
-
0032730443
-
The IntI1 integron integrase preferentially binds single-stranded DNA of the attC site
-
Francia,M.V., Zabala,J.C., de la Cruz,F. and Garcia Lobo,J.M. (1999) The IntI1 integron integrase preferentially binds single-stranded DNA of the attC site. J. Bacteriol., 181, 6844 6849.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 6844-6849
-
-
Francia, M.V.1
Zabala, J.C.2
de la Cruz, F.3
Garcia Lobo, J.M.4
-
36
-
-
0030817595
-
Crystal structure of the site-specific recombinase, XerD
-
Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E., Sherratt,D.J. and Wigley,D.B. (1997) Crystal structure of the site-specific recombinase, XerD. EMBO J., 16, 5178 5187.
-
(1997)
EMBO J.
, vol.16
, pp. 5178-5187
-
-
Subramanya, H.S.1
Arciszewska, L.K.2
Baker, R.A.3
Bird, L.E.4
Sherratt, D.J.5
Wigley, D.B.6
-
38
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford,M.M. (1976). A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem., 72, 248 254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
39
-
-
0032582481
-
Comparative structural analysis by [1H,31P]-NMR and restrained molecular dynamics of two DNA hairpins from a strong DNA topoisomerase II cleavage site
-
Mauffret,O., Amir-Aslani,A., Maroun,R.G., Monnot,M., Lescot,E. and Fermandjian,S. (1998) Comparative structural analysis by [1H,31P]-NMR and restrained molecular dynamics of two DNA hairpins from a strong DNA topoisomerase II cleavage site. J. Mol. Biol., 283, 643 655.
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 643-655
-
-
Mauffret, O.1
Amir-Aslani, A.2
Maroun, R.G.3
Monnot, M.4
Lescot, E.5
Fermandjian, S.6
-
40
-
-
0033607617
-
A DNA hairpin with a single residue loop closed by a strongly distorted Watson Crick G x C base-pair
-
El Amri,C., Mauffret,O., Monnot,M., Tevanian,G., Lescot,E., Porumb,H. and Fermandjian,S. (1999) A DNA hairpin with a single residue loop closed by a strongly distorted Watson Crick G × C base-pair. J. Mol. Biol., 294, 427 442.
-
(1999)
J. Mol. Biol.
, vol.294
, pp. 427-442
-
-
El Amri, C.1
Mauffret, O.2
Monnot, M.3
Tevanian, G.4
Lescot, E.5
Porumb, H.6
Fermandjian, S.7
-
41
-
-
0034785862
-
A model for the gamma delta resolvase synaptic complex
-
Sarkis,G.J., Murley,L.L., Leschziner,A.E., Boocock,M.R., Stark,W.M. and Grindley,N.D. (2001) A model for the gamma delta resolvase synaptic complex. Mol. Cell, 8, 623 631.
-
(2001)
Mol. Cell
, vol.8
, pp. 623-631
-
-
Sarkis, G.J.1
Murley, L.L.2
Leschziner, A.E.3
Boocock, M.R.4
Stark, W.M.5
Grindley, N.D.6
-
42
-
-
0032190242
-
DNA complexes obtained with the integron integrase IntI1 at the attI1 site
-
Gravel,A., Fournier,B. and Roy,P.H. (1998) DNA complexes obtained with the integron integrase IntI1 at the attI1 site. Nucleic Acids Res., 26, 4347 4355.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 4347-4355
-
-
Gravel, A.1
Fournier, B.2
Roy, P.H.3
-
43
-
-
0031850574
-
Binding of the purified integron DNA integrase Intl1 to integron- and cassette-associated recombination sites
-
Collis,C.M., Kim,M.J., Stokes,H.W. and Hall,R.M. (1998) Binding of the purified integron DNA integrase Intl1 to integron- and cassette-associated recombination sites. Mol. Microbiol., 29, 477 490.
-
(1998)
Mol. Microbiol.
, vol.29
, pp. 477-490
-
-
Collis, C.M.1
Kim, M.J.2
Stokes, H.W.3
Hall, R.M.4
-
44
-
-
0031683105
-
Point mutations in the integron integrase IntI1 that affect recombination and/or substrate recognition
-
Gravel,A., Messier,N. and Roy,P.H. (1998) Point mutations in the integron integrase IntI1 that affect recombination and/or substrate recognition. J. Bacteriol., 180, 5437 5442.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 5437-5442
-
-
Gravel, A.1
Messier, N.2
Roy, P.H.3
-
45
-
-
0041375463
-
New insight into site-specific recombination from Flp recombinase-DNA structures
-
Chen,Y. and Rice,P.A. (2003) New insight into site-specific recombination from Flp recombinase-DNA structures. Annu. Rev. Biophys. Biomol. Struct., 32, 135 159.
-
(2003)
Annu. Rev. Biophys. Biomol. Struct.
, vol.32
, pp. 135-159
-
-
Chen, Y.1
Rice, P.A.2
-
46
-
-
0032562596
-
A distinctive class of integron in the Vibrio cholerae genome
-
Mazel,D., Dychinco,B., Webb,V.A. and Davies,J. (1998) A distinctive class of integron in the Vibrio cholerae genome. Science, 280, 605-608.
-
(1998)
Science
, vol.280
, pp. 605-608
-
-
Mazel, D.1
Dychinco, B.2
Webb, V.A.3
Davies, J.4
|