-
1
-
-
0028981217
-
The biology and life cycle of the Rhizocephala (Cirripedia)
-
Hoeg JT (1995) The biology and life cycle of the Rhizocephala (Cirripedia). J Mar. Biol Assoc UK 75(3):517-550.
-
(1995)
J Mar. Biol Assoc UK
, vol.75
, Issue.3
, pp. 517-550
-
-
Hoeg, J.T.1
-
3
-
-
0034953452
-
Recent advances in our knowledge of the Myxozoa
-
Kent ML, et al. (2001) Recent advances in our knowledge of the Myxozoa. J Eukaryot Microbiol 48(4):395-413.
-
(2001)
J Eukaryot Microbiol
, vol.48
, Issue.4
, pp. 395-413
-
-
Kent, M.L.1
-
4
-
-
0002695105
-
Actinomyxidies, nouveau groupe de Mesozoaires parent des Myxosporidies
-
͆tolc A (1899) Actinomyxidies, nouveau groupe de Mesozoaires parent des Myxosporidies. Bull Intl Acad Sci Boheme 22:1-12.
-
(1899)
Bull Intl Acad Sci Boheme
, vol.22
, pp. 1-12
-
-
͆tolc, A.1
-
5
-
-
0000654208
-
L'interpretation des Cnidosporidies et la valeur taxonomique de leur cnidome. Leur cycle comparé à la phase larvaire des Narcomeduses Cuninides
-
Weill R (1938) L'interpretation des Cnidosporidies et la valeur taxonomique de leur cnidome. Leur cycle comparé à la phase larvaire des Narcomeduses Cuninides. Travaux de la Station Zoologique de Wimereaux 13:727-744.
-
(1938)
Travaux de la Station Zoologique de Wimereaux
, vol.13
, pp. 727-744
-
-
Weill, R.1
-
6
-
-
33645768797
-
Myxozoan genera: Definition and notes on taxonomy, lifecycle terminology and pathogenic species
-
Lom J, Dyková I (2006) Myxozoan genera: Definition and notes on taxonomy, lifecycle terminology and pathogenic species. Folia Parasitol (Praha) 53(1):1-36.
-
(2006)
Folia Parasitol (Praha)
, vol.53
, Issue.1
, pp. 1-36
-
-
Lom, J.1
Dyková, I.2
-
7
-
-
0021203561
-
Biology contravenes taxonomy in the myxozoa: New discoveries show alternation of invertebrate and vertebrate hosts
-
Wolf K, Markiw ME (1984) Biology contravenes taxonomy in the myxozoa: New discoveries show alternation of invertebrate and vertebrate hosts. Science 225(4669):1449-1452.
-
(1984)
Science
, vol.225
, Issue.4669
, pp. 1449-1452
-
-
Wolf, K.1
Markiw, M.E.2
-
9
-
-
0000159645
-
Light and electron-microscopic observations on the route of the triactinomyxon-sporoplasm of Myxobolus cerebralis from epidermis into rainbow trout cartilage
-
El-Matbouli M, Hoffmann RW, Mandok C (1995) Light and electron-microscopic observations on the route of the triactinomyxon-sporoplasm of Myxobolus cerebralis from epidermis into rainbow trout cartilage. J Fish Biol 46(6):919-935.
-
(1995)
J Fish Biol
, vol.46
, Issue.6
, pp. 919-935
-
-
El-Matbouli, M.1
Hoffmann, R.W.2
Mandok, C.3
-
10
-
-
0036276264
-
Orphan worm finds a home: Buddenbrockia is a myxozoan
-
Monteiro AS, Okamura B, Holland P W H (2002) Orphan worm finds a home: Buddenbrockia is a myxozoan. Mol Biol Evol 19:968-971.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 968-971
-
-
Monteiro, A.S.1
Okamura, B.2
Holland, P.W.H.3
-
11
-
-
84899656694
-
Diversification and repeated morphological transitions in endoparasitic cnidarians (Myxozoa: Malacosporea)
-
Hartikainen H, Gruhl A, Okamura B (2014) Diversification and repeated morphological transitions in endoparasitic cnidarians (Myxozoa: Malacosporea). Mol Phylogenet Evol 76:261-269.
-
(2014)
Mol Phylogenet Evol
, vol.76
, pp. 261-269
-
-
Hartikainen, H.1
Gruhl, A.2
Okamura, B.3
-
12
-
-
0018526250
-
The parasitic coelenterate, Polypodium hydriforme USSOV, from the eggs of the American acipenseriform Polyodon spathula
-
Raikova EV, Suppes VC, Hoffman GL (1979) The parasitic coelenterate, Polypodium hydriforme USSOV, from the eggs of the American acipenseriform Polyodon spathula. J Parasitol 65(5):804-810.
-
(1979)
J Parasitol
, vol.65
, Issue.5
, pp. 804-810
-
-
Raikova, E.V.1
Suppes, V.C.2
Hoffman, G.L.3
-
13
-
-
78649343343
-
The phylogenetic position of Myxozoa: Exploring conflicting signals in phylogenomic and ribosomal datasets
-
Evans NM, Holder MT, Barbeitos MS, Okamura B, Cartwright P (2010) The phylogenetic position of Myxozoa: Exploring conflicting signals in phylogenomic and ribosomal datasets. Mol Biol Evol 27(12):2733-2746.
-
(2010)
Mol Biol Evol
, vol.27
, Issue.12
, pp. 2733-2746
-
-
Evans, N.M.1
Holder, M.T.2
Barbeitos, M.S.3
Okamura, B.4
Cartwright, P.5
-
14
-
-
84931341220
-
The road to Cnidaria: History of phylogeny of the Myxozoa
-
Foox J, Siddall ME (2015) The road to Cnidaria: History of phylogeny of the Myxozoa. J Parasitol 101(3):269-274.
-
(2015)
J Parasitol
, vol.101
, Issue.3
, pp. 269-274
-
-
Foox, J.1
Siddall, M.E.2
-
17
-
-
0012811658
-
Geschlechtliche Form, Phylogenie und systematische Stellung von Polypodium hydriforme Ussov
-
Lipin A (1925) Geschlechtliche Form, Phylogenie und systematische Stellung von Polypodium hydriforme Ussov. Zool Jahrb Anat 47:541-635.
-
(1925)
Zool Jahrb Anat
, vol.47
, pp. 541-635
-
-
Lipin, A.1
-
18
-
-
0012814726
-
On the systematic position of Polypodium hydriforme Ussov (Coelenterata)
-
eds Koltum VM, Stepanjants SD Zoological Institute of Academy of Sciences of USSR, Leningrad
-
Raikova EV (1988) On the systematic position of Polypodium hydriforme Ussov (Coelenterata). Porifera and Cnidaria: Contemporary State and Perspectives of Investigations, eds Koltum VM, Stepanjants SD (Zoological Institute of Academy of Sciences of USSR, Leningrad), pp 116-122.
-
(1988)
Porifera and Cnidaria: Contemporary State and Perspectives of Investigations
, pp. 116-122
-
-
Raikova, E.V.1
-
19
-
-
0029597418
-
The demise of a phylum of protists: Phylogeny of Myxozoa and other parasitic cnidaria
-
Siddall ME, Martin DS, Bridge D, Desser SS, Cone DK (1995) The demise of a phylum of protists: Phylogeny of Myxozoa and other parasitic cnidaria. J Parasitol 81(6):961-967.
-
(1995)
J Parasitol
, vol.81
, Issue.6
, pp. 961-967
-
-
Siddall, M.E.1
Martin, D.S.2
Bridge, D.3
Desser, S.S.4
Cone, D.K.5
-
20
-
-
0027943362
-
Molecular evidence that the myxozoan protists are metazoans
-
Smothers JF, Von Dohlen CD, Smith LH, Jr, Spall RD (1994) Molecular evidence that the myxozoan protists are metazoans. Science 265(5179):1719-1721.
-
(1994)
Science
, vol.265
, Issue.5179
, pp. 1719-1721
-
-
Smothers, J.F.1
Von Dohlen, C.D.2
Smith, L.H.3
Spall, R.D.4
-
21
-
-
44349098019
-
Phylogenetic placement of the enigmatic parasite, Polypodium hydriforme, within the Phylum Cnidaria
-
Evans NM, Lindner A, Raikova EV, Collins AG, Cartwright P (2008) Phylogenetic placement of the enigmatic parasite, Polypodium hydriforme, within the Phylum Cnidaria. BMC Evol Biol 8(1):139.
-
(2008)
BMC Evol Biol
, vol.8
, Issue.1
, pp. 139
-
-
Evans, N.M.1
Lindner, A.2
Raikova, E.V.3
Collins, A.G.4
Cartwright, P.5
-
22
-
-
0033102131
-
Long-branch abstractions
-
Siddall ME, Whiting MF (1999) Long-branch abstractions. Cladistics 15(1):9-24.
-
(1999)
Cladistics
, vol.15
, Issue.1
, pp. 9-24
-
-
Siddall, M.E.1
Whiting, M.F.2
-
23
-
-
0037711134
-
Myxozoa, Polypodium, and the origin of the Bilateria: The phylogenetic position of "Endocnidozoa" in the light of the rediscovery of Buddenbrockia
-
Zrzavý J, Hypša V (2003) Myxozoa, Polypodium, and the origin of the Bilateria: The phylogenetic position of "Endocnidozoa" in the light of the rediscovery of Buddenbrockia. Cladistics 19(3):164-169.
-
(2003)
Cladistics
, vol.19
, Issue.3
, pp. 164-169
-
-
Zrzavý, J.1
Hypša, V.2
-
24
-
-
84907554141
-
New phylogenomic and comparative analyses provide corroborating evidence that Myxozoa is Cnidaria
-
Feng J-M, et al. (2014) New phylogenomic and comparative analyses provide corroborating evidence that Myxozoa is Cnidaria. Mol Phylogenet Evol 81(0):10-18.
-
(2014)
Mol Phylogenet Evol
, vol.81
, pp. 10-18
-
-
Feng, J.-M.1
-
25
-
-
34447295896
-
Buddenbrockia is a cnidarian worm
-
Jiménez-Guri E, Philippe H, Okamura B, Holland P W H (2007) Buddenbrockia is a cnidarian worm. Science 317(5834):116-118.
-
(2007)
Science
, vol.317
, Issue.5834
, pp. 116-118
-
-
Jiménez-Guri, E.1
Philippe, H.2
Okamura, B.3
Holland, P.W.H.4
-
26
-
-
84873813176
-
Agent of whirling disease meets orphan worm: Phylogenomic analyses firmly place Myxozoa in Cnidaria
-
Nesnidal MP, Helmkampf M, Bruchhaus I, El-Matbouli M, Hausdorf B (2013) Agent of whirling disease meets orphan worm: Phylogenomic analyses firmly place Myxozoa in Cnidaria. PLoS One 8(1):e54576.
-
(2013)
PLoS One
, vol.8
, Issue.1
, pp. e54576
-
-
Nesnidal, M.P.1
Helmkampf, M.2
Bruchhaus, I.3
El-Matbouli, M.4
Hausdorf, B.5
-
27
-
-
79551628102
-
A novel minicollagen gene links cnidarians and myxozoans
-
Holland JW, Okamura B, Hartikainen H, Secombes CJ (2011) A novel minicollagen gene links cnidarians and myxozoans. Proc R Soc Lond B Biol Sci 278(1705):546-553.
-
(2011)
Proc R Soc Lond B Biol Sci
, vol.278
, Issue.1705
, pp. 546-553
-
-
Holland, J.W.1
Okamura, B.2
Hartikainen, H.3
Secombes, C.J.4
-
28
-
-
84907933466
-
Diversity and evolution of myxozoan minicollagens and nematogalectins
-
Shpirer E, et al. (2014) Diversity and evolution of myxozoan minicollagens and nematogalectins. BMC Evol Biol 14(1):205.
-
(2014)
BMC Evol Biol
, vol.14
, Issue.1
, pp. 205
-
-
Shpirer, E.1
-
29
-
-
39049154241
-
Minicollagen-15, a novel minicollagen isolated from Hydra, forms tubule structures in nematocysts
-
Adamczyk P, et al. (2008) Minicollagen-15, a novel minicollagen isolated from Hydra, forms tubule structures in nematocysts. J Mol Biol 376(4):1008-1020.
-
(2008)
J Mol Biol
, vol.376
, Issue.4
, pp. 1008-1020
-
-
Adamczyk, P.1
-
30
-
-
78649870022
-
Nematogalectin, a nematocyst protein with GlyXY and galectin domains, demonstrates nematocyte-specific alternative splicing in Hydra
-
Hwang JS, et al. (2010) Nematogalectin, a nematocyst protein with GlyXY and galectin domains, demonstrates nematocyte-specific alternative splicing in Hydra. Proc Natl Acad Sci USA 107(43):18539-18544.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.43
, pp. 18539-18544
-
-
Hwang, J.S.1
-
31
-
-
84855855130
-
Morphology, distribution, and evolution of apical structure of nematocysts in hexacorallia
-
Reft AJ, Daly M (2012) Morphology, distribution, and evolution of apical structure of nematocysts in hexacorallia. J Morphol 273(2):121-136.
-
(2012)
J Morphol
, vol.273
, Issue.2
, pp. 121-136
-
-
Reft, A.J.1
Daly, M.2
-
32
-
-
84943804985
-
-
Springer, Berlin
-
Okamura B, Gruhl A, Reft AJ (2015) Cnidarian Origins of the Myxozoa: Myxozoan Evolution, Ecology and Development (Springer, Berlin), pp 45-68.
-
(2015)
Cnidarian Origins of the Myxozoa: Myxozoan Evolution, Ecology and Development
, pp. 45-68
-
-
Okamura, B.1
Gruhl, A.2
Reft, A.J.3
-
33
-
-
77954898638
-
History of myxozoan character evolution on the basis of rDNA and EF-2 data
-
Fiala I, Bartosová P (2010) History of myxozoan character evolution on the basis of rDNA and EF-2 data. BMC Evol Biol 10(1):228.
-
(2010)
BMC Evol Biol
, vol.10
, Issue.1
, pp. 228
-
-
Fiala, I.1
Bartosová, P.2
-
34
-
-
2442691520
-
A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process
-
Lartillot N, Philippe H (2004) A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process. Mol Biol Evol 21(6):1095-1109.
-
(2004)
Mol Biol Evol
, vol.21
, Issue.6
, pp. 1095-1109
-
-
Lartillot, N.1
Philippe, H.2
-
35
-
-
84875056107
-
Deep metazoan phylogeny: When different genes tell different stories
-
Nosenko T, et al. (2013) Deep metazoan phylogeny: When different genes tell different stories. Mol Phylogenet Evol 67(1):223-233.
-
(2013)
Mol Phylogenet Evol
, vol.67
, Issue.1
, pp. 223-233
-
-
Nosenko, T.1
-
36
-
-
58549121169
-
Assessing the gene space in draft genomes
-
Parra G, Bradnam K, Ning Z, Keane T, Korf I (2009) Assessing the gene space in draft genomes. Nucleic Acids Res 37(1):289-297.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.1
, pp. 289-297
-
-
Parra, G.1
Bradnam, K.2
Ning, Z.3
Keane, T.4
Korf, I.5
-
37
-
-
84938097712
-
The plant parasite Pratylenchus coffeae carries a minimal nematode genome
-
Burke M, et al. (2015) The plant parasite Pratylenchus coffeae carries a minimal nematode genome. Nematology 17(6):621-637.
-
(2015)
Nematology
, vol.17
, Issue.6
, pp. 621-637
-
-
Burke, M.1
-
38
-
-
34447300950
-
Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization
-
Putnam NH, et al. (2007) Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization. Science 317(5834):86-94.
-
(2007)
Science
, vol.317
, Issue.5834
, pp. 86-94
-
-
Putnam, N.H.1
-
39
-
-
77950080387
-
The dynamic genome of Hydra
-
Chapman JA, et al. (2010) The dynamic genome of Hydra. Nature 464(7288):592-596.
-
(2010)
Nature
, vol.464
, Issue.7288
, pp. 592-596
-
-
Chapman, J.A.1
-
40
-
-
84938490536
-
The genome of the myxosporean Thelohanellus kitauei shows adaptations to nutrient acquisition within its fish host
-
Yang Y, et al. (2014) The genome of the myxosporean Thelohanellus kitauei shows adaptations to nutrient acquisition within its fish host. Genome Biol Evol 6(12):3182-3198.
-
(2014)
Genome Biol Evol
, vol.6
, Issue.12
, pp. 3182-3198
-
-
Yang, Y.1
-
41
-
-
67650721347
-
CateGOrizer: A web-based program to batch analyze gene ontology classification categories
-
Zhi-Liang H, Jie B, Reecy JM (2008) CateGOrizer: A web-based program to batch analyze gene ontology classification categories. Online J Bioinform 9(2):108-112.
-
(2008)
Online J Bioinform
, vol.9
, Issue.2
, pp. 108-112
-
-
Zhi-Liang, H.1
Jie, B.2
Reecy, J.M.3
-
42
-
-
33644787447
-
OrthoMCL-DB: Querying a comprehensive multi-species collection of ortholog groups
-
Database issue
-
Chen F, Mackey AJ, Stoeckert CJ, Jr, Roos DS (2006) OrthoMCL-DB: Querying a comprehensive multi-species collection of ortholog groups. Nucleic Acids Res 34 (Database issue, suppl 1):D363-D368.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. D363-D368
-
-
Chen, F.1
Mackey, A.J.2
Stoeckert, C.J.3
Roos, D.S.4
-
43
-
-
33749402982
-
The cnidarian-bilaterian ancestor possessed at least 56 homeoboxes: Evidence from the starlet sea anemone, Nematostella vectensis
-
Ryan JF, et al. (2006) The cnidarian-bilaterian ancestor possessed at least 56 homeoboxes: Evidence from the starlet sea anemone, Nematostella vectensis. Genome Biol 7(7):R64.
-
(2006)
Genome Biol
, vol.7
, Issue.7
, pp. R64
-
-
Ryan, J.F.1
-
44
-
-
50449100342
-
The evolutionary origin of the Runx/CBFbeta transcription factors: Studies of the most basal metazoans
-
Sullivan JC, et al. (2008) The evolutionary origin of the Runx/CBFbeta transcription factors: Studies of the most basal metazoans. BMC Evol Biol 8(1):228.
-
(2008)
BMC Evol Biol
, vol.8
, Issue.1
, pp. 228
-
-
Sullivan, J.C.1
-
45
-
-
84906793865
-
Lineage-specific evolution of cnidarian Wnt ligands
-
Hensel K, Lotan T, Sanders SM, Cartwright P, Frank U (2014) Lineage-specific evolution of cnidarian Wnt ligands. Evol Dev 16(5):259-269.
-
(2014)
Evol Dev
, vol.16
, Issue.5
, pp. 259-269
-
-
Hensel, K.1
Lotan, T.2
Sanders, S.M.3
Cartwright, P.4
Frank, U.5
-
46
-
-
37849027508
-
The Hedgehog gene family of the cnidarian, Nematostella vectensis, and implications for understanding metazoan Hedgehog pathway evolution
-
Matus DQ, Magie CR, Pang K, Martindale MQ, Thomsen GH (2008) The Hedgehog gene family of the cnidarian, Nematostella vectensis, and implications for understanding metazoan Hedgehog pathway evolution. Dev Biol 313(2):501-518.
-
(2008)
Dev Biol
, vol.313
, Issue.2
, pp. 501-518
-
-
Matus, D.Q.1
Magie, C.R.2
Pang, K.3
Martindale, M.Q.4
Thomsen, G.H.5
-
47
-
-
84870376016
-
FoxO is a critical regulator of stem cell maintenance in immortal Hydra
-
Boehm A-M, et al. (2012) FoxO is a critical regulator of stem cell maintenance in immortal Hydra. Proc Natl Acad Sci USA 109(48):19697-19702.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.48
, pp. 19697-19702
-
-
Boehm, A.-M.1
-
48
-
-
84891924741
-
PIWI proteins and PIWI-interacting RNAs function in Hydra somatic stem cells
-
Juliano CE, et al. (2014) PIWI proteins and PIWI-interacting RNAs function in Hydra somatic stem cells. Proc Natl Acad Sci USA 111(1):337-342.
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, Issue.1
, pp. 337-342
-
-
Juliano, C.E.1
-
49
-
-
70449578273
-
Evolutionary history of the HAP2/GCS1 gene and sexual reproduction in metazoans
-
Steele RE, Dana CE (2009) Evolutionary history of the HAP2/GCS1 gene and sexual reproduction in metazoans. PLoS One 4(11):e7680.
-
(2009)
PLoS One
, vol.4
, Issue.11
, pp. e7680
-
-
Steele, R.E.1
Dana, C.E.2
-
50
-
-
33846894978
-
The Notch signaling pathway in the cnidarian Hydra
-
Käsbauer T, et al. (2007) The Notch signaling pathway in the cnidarian Hydra. Dev Biol 303(1):376-390.
-
(2007)
Dev Biol
, vol.303
, Issue.1
, pp. 376-390
-
-
Käsbauer, T.1
-
51
-
-
0035713022
-
Identification and expression of HySmad1, a member of the R-Smad family of TGFbeta signal transducers, in the diploblastic metazoan Hydra
-
Hobmayer B, Rentzsch F, Holstein TW (2001) Identification and expression of HySmad1, a member of the R-Smad family of TGFbeta signal transducers, in the diploblastic metazoan Hydra. Dev Genes Evol 211(12):597-602.
-
(2001)
Dev Genes Evol
, vol.211
, Issue.12
, pp. 597-602
-
-
Hobmayer, B.1
Rentzsch, F.2
Holstein, T.W.3
-
52
-
-
79951478430
-
Acoelomorph flatworms are deuterostomes related to Xenoturbella
-
Philippe H, et al. (2011) Acoelomorph flatworms are deuterostomes related to Xenoturbella. Nature 470(7333):255-258.
-
(2011)
Nature
, vol.470
, Issue.7333
, pp. 255-258
-
-
Philippe, H.1
-
53
-
-
84881629698
-
PhyloBayes MPI: Phylogenetic reconstruction with infinite mixtures of profiles in a parallel environment
-
Lartillot N, Rodrigue N, Stubbs D, Richer J (2013) PhyloBayes MPI: Phylogenetic reconstruction with infinite mixtures of profiles in a parallel environment. Syst Biol 62(4):611-615.
-
(2013)
Syst Biol
, vol.62
, Issue.4
, pp. 611-615
-
-
Lartillot, N.1
Rodrigue, N.2
Stubbs, D.3
Richer, J.4
-
54
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis A (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22(21):2688-2690.
-
(2006)
Bioinformatics
, vol.22
, Issue.21
, pp. 2688-2690
-
-
Stamatakis, A.1
-
56
-
-
66449136667
-
ABySS: A parallel assembler for short read sequence data
-
Simpson JT, et al. (2009) ABySS: A parallel assembler for short read sequence data. Genome Res 19(6):1117-1123.
-
(2009)
Genome Res
, vol.19
, Issue.6
, pp. 1117-1123
-
-
Simpson, J.T.1
-
57
-
-
79960264362
-
Full-length transcriptome assembly from RNA-Seq data without a reference genome
-
Grabherr MG, et al. (2011) Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nat Biotechnol 29(7):644-652.
-
(2011)
Nat Biotechnol
, vol.29
, Issue.7
, pp. 644-652
-
-
Grabherr, M.G.1
-
58
-
-
34249848751
-
CEGMA: A pipeline to accurately annotate core genes in eukaryotic genomes
-
Parra G, Bradnam K, Korf I (2007) CEGMA: A pipeline to accurately annotate core genes in eukaryotic genomes. Bioinformatics 23(9):1061-1067.
-
(2007)
Bioinformatics
, vol.23
, Issue.9
, pp. 1061-1067
-
-
Parra, G.1
Bradnam, K.2
Korf, I.3
-
59
-
-
77949587649
-
Fast and accurate long-read alignment with Burrows-Wheeler transform
-
Li H, Durbin R (2010) Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics 26(5):589-595.
-
(2010)
Bioinformatics
, vol.26
, Issue.5
, pp. 589-595
-
-
Li, H.1
Durbin, R.2
-
60
-
-
84870422798
-
Qualimap: Evaluating next-generation sequencing alignment data
-
García-Alcalde F, et al. (2012) Qualimap: Evaluating next-generation sequencing alignment data. Bioinformatics 28(20):2678-2679.
-
(2012)
Bioinformatics
, vol.28
, Issue.20
, pp. 2678-2679
-
-
García-Alcalde, F.1
-
61
-
-
0034069495
-
Gene ontology: Tool for the unification of biology
-
Ashburner M, et al.; The Gene Ontology Consortium (2000) Gene ontology: Tool for the unification of biology. Nat Genet 25(1):25-29.
-
(2000)
Nat Genet
, vol.25
, Issue.1
, pp. 25-29
-
-
Ashburner, M.1
-
62
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, et al. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25(17):3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
-
63
-
-
84891760956
-
Data, information, knowledge and principle: Back to metabolism in KEGG
-
Database issue
-
Kanehisa M, et al. (2014) Data, information, knowledge and principle: Back to metabolism in KEGG. Nucleic Acids Res 42 (Database issue, D1):D199-D205.
-
(2014)
Nucleic Acids Res
, vol.42
, Issue.D1
, pp. D199-D205
-
-
Kanehisa, M.1
-
64
-
-
28444475857
-
Kudoa iwatai (Myxosporea: Multivalvulida) in wild and cultured fish in the Red Sea: Redescription and molecular phylogeny
-
Diamant A, Ucko M, Paperna I, Colorni A, Lipshitz A (2005) Kudoa iwatai (Myxosporea: Multivalvulida) in wild and cultured fish in the Red Sea: Redescription and molecular phylogeny. J Parasitol 91(5):1175-1189.
-
(2005)
J Parasitol
, vol.91
, Issue.5
, pp. 1175-1189
-
-
Diamant, A.1
Ucko, M.2
Paperna, I.3
Colorni, A.4
Lipshitz, A.5
-
65
-
-
84949604210
-
The complete mitochondrial genome of the devil firefish Pterois miles (Bennett, 1828) (Scorpaenidae)
-
August 8
-
Dray L, Neuhof M, Diamant A, Huchon D (August 8, 2014) The complete mitochondrial genome of the devil firefish Pterois miles (Bennett, 1828) (Scorpaenidae). Mitochondrial DNA, 10.3109/19401736.2014.945565.
-
(2014)
Mitochondrial DNA
-
-
Dray, L.1
Neuhof, M.2
Diamant, A.3
Huchon, D.4
-
66
-
-
84949591423
-
The complete mitochondrial genome of the gilthead seabream Sparus aurata L. (Sparidae)
-
Dray L, Neuhof M, Diamant A, Huchon D (2014) The complete mitochondrial genome of the gilthead seabream Sparus aurata L. (Sparidae). Mitochondrial DNA, 10.3109/19401736.2014.928861.
-
(2014)
Mitochondrial DNA
-
-
Dray, L.1
Neuhof, M.2
Diamant, A.3
Huchon, D.4
-
67
-
-
79961123152
-
RSEM: Accurate transcript quantification from RNA-Seq data with or without a reference genome
-
Li B, Dewey CN (2011) RSEM: Accurate transcript quantification from RNA-Seq data with or without a reference genome. BMC Bioinformatics 12(1):323.
-
(2011)
BMC Bioinformatics
, vol.12
, Issue.1
, pp. 323
-
-
Li, B.1
Dewey, C.N.2
-
68
-
-
84880266648
-
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
-
Haas BJ, et al. (2013) De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis. Nat Protoc 8(8):1494-1512.
-
(2013)
Nat Protoc
, vol.8
, Issue.8
, pp. 1494-1512
-
-
Haas, B.J.1
-
69
-
-
0032849859
-
CAP3: A DNA sequence assembly program
-
Huang X, Madan A (1999) CAP3: A DNA sequence assembly program. Genome Res 9(9):868-877.
-
(1999)
Genome Res
, vol.9
, Issue.9
, pp. 868-877
-
-
Huang, X.1
Madan, A.2
-
70
-
-
84859210032
-
Fast gapped-read alignment with Bowtie 2
-
Langmead B, Salzberg SL (2012) Fast gapped-read alignment with Bowtie 2. Nat Methods 9(4):357-359.
-
(2012)
Nat Methods
, vol.9
, Issue.4
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
71
-
-
84055178433
-
MAKER2: An annotation pipeline and genome-database management tool for second-generation genome projects
-
Holt C, Yandell M (2011) MAKER2: An annotation pipeline and genome-database management tool for second-generation genome projects. BMC Bioinformatics 12:491.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 491
-
-
Holt, C.1
Yandell, M.2
-
72
-
-
23144455729
-
OrfPredictor: Predicting protein-coding regions in EST-derived sequences
-
Web Server issue
-
Min XJ, Butler G, Storms R, Tsang A (2005) OrfPredictor: Predicting protein-coding regions in EST-derived sequences. Nucleic Acids Res 33 (Web Server issue, suppl 2):W677-W680.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. W677-W680
-
-
Min, X.J.1
Butler, G.2
Storms, R.3
Tsang, A.4
-
73
-
-
84908547604
-
Jvenn: An interactive Venn diagram viewer
-
Bardou P, Mariette J, Escudié F, Djemiel C, Klopp C (2014) jvenn: An interactive Venn diagram viewer. BMC Bioinformatics 15(1):293.
-
(2014)
BMC Bioinformatics
, vol.15
, Issue.1
, pp. 293
-
-
Bardou, P.1
Mariette, J.2
Escudié, F.3
Djemiel, C.4
Klopp, C.5
|