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Volumn 10, Issue 12, 2015, Pages 1939-1952

Rapid identification of clinical members of Fusarium fujikuroi complex using MALDI-TOF MS

Author keywords

database; fingerprint; Fusarium fujikuroi complex; MALDI TOF MS; multi locus sequence analysis; spectral analysis

Indexed keywords

FORMIC ACID; FUNGAL PROTEIN;

EID: 84948436501     PISSN: 17460913     EISSN: 17460921     Source Type: Journal    
DOI: 10.2217/fmb.15.108     Document Type: Article
Times cited : (31)

References (42)
  • 1
    • 77950513662 scopus 로고    scopus 로고
    • Molecular phylogenetic diversity of dermatologic and other human pathogenic fusarial isolates from hospitals in northern and central Italy
    • Migheli Q, Balmas V, Harak H et al. Molecular phylogenetic diversity of dermatologic and other human pathogenic fusarial isolates from hospitals in northern and central Italy. J. Clin. Microbiol. 48(4), 1076-1084 (2010).
    • (2010) J. Clin. Microbiol. , vol.48 , Issue.4 , pp. 1076-1084
    • Migheli, Q.1    Balmas, V.2    Harak, H.3
  • 2
    • 84904434174 scopus 로고    scopus 로고
    • Improvement in the outcome of invasive fusariosis in the last decade
    • Nucci M, Marr KA, Vehreschild MJ et al. Improvement in the outcome of invasive fusariosis in the last decade. Clin. Microbiol. Infect. 20(6), 580-585 (2014).
    • (2014) Clin. Microbiol. Infect. , vol.20 , Issue.6 , pp. 580-585
    • Nucci, M.1    Marr, K.A.2    Vehreschild, M.J.3
  • 3
    • 79961242355 scopus 로고    scopus 로고
    • Invasive Fusarium infections: A retrospective survey of 31 cases. The French 'Groupe d'Etudes des Mycoses Opportunistes' GEMO
    • Hennequin C, Lavarde V, Poirot JL et al. Invasive Fusarium infections: a retrospective survey of 31 cases. The French 'Groupe d'Etudes des Mycoses Opportunistes' GEMO. J. Med. Vet. Mycol. 35(2), 107-114 (1997).
    • (1997) J. Med. Vet. Mycol. , vol.35 , Issue.2 , pp. 107-114
    • Hennequin, C.1    Lavarde, V.2    Poirot, J.L.3
  • 4
    • 26944443864 scopus 로고    scopus 로고
    • Use of the Diversi Lab System for species and strain differentiation of Fusarium species isolates
    • Healy M, Reece K, Walton D et al. Use of the Diversi Lab System for species and strain differentiation of Fusarium species isolates. J. Clin. Microbiol. 43(10), 5278-5280 (2005).
    • (2005) J. Clin. Microbiol. , vol.43 , Issue.10 , pp. 5278-5280
    • Healy, M.1    Reece, K.2    Walton, D.3
  • 5
    • 35448960891 scopus 로고    scopus 로고
    • Fusarium infections in immunocompromised patients
    • Nucci M, Anaissie E. Fusarium infections in immunocompromised patients. Clin. Microbiol. Rev. 20(4), 695-704 (2007).
    • (2007) Clin. Microbiol. Rev. , vol.20 , Issue.4 , pp. 695-704
    • Nucci, M.1    Anaissie, E.2
  • 6
    • 84874795856 scopus 로고    scopus 로고
    • MALDI-TOF-MS-based species identification and typing approaches in medical mycology
    • Bader O. MALDI-TOF-MS-based species identification and typing approaches in medical mycology. Proteomics 13(5), 788-799 (2013).
    • (2013) Proteomics , vol.13 , Issue.5 , pp. 788-799
    • Bader, O.1
  • 7
    • 34250341823 scopus 로고    scopus 로고
    • A higher level phylogenetic classification of the fungi
    • Hibbett DS, Binder M, Bischoff JF et al. A higher level phylogenetic classification of the fungi. Mycol. Res. 111(5), 509-547 (2007).
    • (2007) Mycol. Res. , vol.111 , Issue.5 , pp. 509-547
    • Hibbett, D.S.1    Binder, M.2    Bischoff, J.F.3
  • 8
    • 33750953455 scopus 로고    scopus 로고
    • Pandora's Mycological Box: Molecular sequences vs morphology in understanding fungal relationships and biodiversity
    • Hawksworth DL. Pandora's Mycological Box: molecular sequences vs. morphology in understanding fungal relationships and biodiversity. Rev. Iberoam. Micol. 23(3), 127-133 (2006).
    • (2006) Rev. Iberoam. Micol. , vol.23 , Issue.3 , pp. 127-133
    • Hawksworth, D.L.1
  • 10
    • 74049132252 scopus 로고    scopus 로고
    • Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    • Santos C, Paterson RR, Venancio A, Lima N. Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. J. Appl. Microbiol. 108(2), 375-85 (2010).
    • (2010) J. Appl. Microbiol. , vol.108 , Issue.2 , pp. 375-385
    • Santos, C.1    Paterson, R.R.2    Venancio, A.3    Lima, N.4
  • 11
    • 28044452692 scopus 로고    scopus 로고
    • Characterization of intact Penicillium spores by matrix-assisted laser desorption/ionization mass spectrometry
    • Chen HY, Chen YC. Characterization of intact Penicillium spores by matrix-assisted laser desorption/ionization mass spectrometry. Rapid Commun. Mass Spectrom. 19(23), 3564-3568 (2005).
    • (2005) Rapid Commun. Mass Spectrom. , vol.19 , Issue.23 , pp. 3564-3568
    • Chen, H.Y.1    Chen, Y.C.2
  • 12
    • 79960965903 scopus 로고    scopus 로고
    • The Utility of matrix assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) following introduction for routine laboratory bacterial identification
    • Neville SA, Lecordier A, Ziochos H et al. The Utility of matrix assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) following introduction for routine laboratory bacterial identification. J. Clin. Microbiol. 49(8), 2980-2984 (2011).
    • (2011) J. Clin. Microbiol. , vol.49 , Issue.8 , pp. 2980-2984
    • Neville, S.A.1    Lecordier, A.2    Ziochos, H.3
  • 13
    • 83455212028 scopus 로고    scopus 로고
    • Mold routine identification in the clinical laboratory by matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    • Cassagne C, Ranque S, Normand A-C et al. Mold routine identification in the clinical laboratory by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. PLoS ONE 6(12), e28425 (2011).
    • (2011) PLoS ONE , vol.6 , Issue.12 , pp. e28425
    • Cassagne, C.1    Ranque, S.2    Normand, A.-C.3
  • 14
    • 84859897648 scopus 로고    scopus 로고
    • Species identification of Aspergillus Fusarium and Mucorales with direct surface analysis by matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    • De Carolis E, Posteraro B, Lass-Florl C et al. Species identification of Aspergillus Fusarium and Mucorales with direct surface analysis by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin. Microbiol. Infect. 18(5), 475-484 (2012).
    • (2012) Clin. Microbiol. Infect. , vol.18 , Issue.5 , pp. 475-484
    • De Carolis, E.1    Posteraro, B.2    Lass-Florl, C.3
  • 15
    • 84896822719 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry: A new possibility for the identification and typing of anaerobic bacteria
    • Nagy E. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry: a new possibility for the identification and typing of anaerobic bacteria. Future Microbiol. 9(2), 217-33 (2014).
    • (2014) Future Microbiol. , vol.9 , Issue.2 , pp. 217-233
    • Nagy, E.1
  • 16
    • 84876705043 scopus 로고    scopus 로고
    • Advances in identification of clinical yeast isolates by use of matrix-assisted laser desorption ionizationtime of flight mass spectrometry
    • Buchan BW, Ledeboer NA. Advances in identification of clinical yeast isolates by use of matrix-assisted laser desorption ionizationtime of flight mass spectrometry. J. Clin. Microbiol. 51(5), 1359-1366 (2013).
    • (2013) J. Clin. Microbiol. , vol.51 , Issue.5 , pp. 1359-1366
    • Buchan, B.W.1    Ledeboer, N.A.2
  • 17
    • 84904291480 scopus 로고    scopus 로고
    • Discrimination of multilocus sequence typing-based Campylobacter jejuni subgroups by MALDI-TOF mass spectrometry
    • Zautner AE, Masanta WO, Tareen AM et al. Discrimination of multilocus sequence typing-based Campylobacter jejuni subgroups by MALDI-TOF mass spectrometry. BMC Microbiol. 13, 247 (2013).
    • (2013) BMC Microbiol. , vol.13 , pp. 247
    • Zautner, A.E.1    Masanta, W.O.2    Tareen, A.M.3
  • 18
    • 84903908190 scopus 로고    scopus 로고
    • Rapid MALDI-TOF Mass spectrometry strain typing during a large outbreak of shigatoxigenic Escherichia coli
    • Christner M, Trusch M, Rohde H et al. Rapid MALDI-TOF Mass spectrometry strain typing during a large outbreak of shigatoxigenic Escherichia coli. PLoS ONE 9(7), e101924 (2014).
    • (2014) PLoS ONE , vol.9 , Issue.7 , pp. e101924
    • Christner, M.1    Trusch, M.2    Rohde, H.3
  • 19
    • 68249138395 scopus 로고    scopus 로고
    • Use of mass spectrometry to identify clinical Fusarium isolates
    • Marinach-Patrice C, Lethuillier A, Marly A et al. Use of mass spectrometry to identify clinical Fusarium isolates. Clin. Microbiol. Infect. 15(7), 634-642 (2009).
    • (2009) Clin. Microbiol. Infect. , vol.15 , Issue.7 , pp. 634-642
    • Marinach-Patrice, C.1    Lethuillier, A.2    Marly, A.3
  • 20
    • 84876103097 scopus 로고    scopus 로고
    • MALDI-TOF mass spectrometry in the clinical mycology laboratory: Identification of fungi and beyond
    • Posteraro B, De Carolis E, Vella A, Sanguinetti M. MALDI-TOF mass spectrometry in the clinical mycology laboratory: identification of fungi and beyond. Expert Rev. Proteomics. 10(2), 151-164 (2013).
    • (2013) Expert Rev. Proteomics. , vol.10 , Issue.2 , pp. 151-164
    • Posteraro, B.1    De Carolis, E.2    Vella, A.3    Sanguinetti, M.4
  • 21
    • 84921761398 scopus 로고    scopus 로고
    • Use of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of molds of the Fusarium genus
    • Triest D, Stubbe D, De Cremer K et al. Use of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of molds of the Fusarium genus. J. Clin. Microbiol. 53(2), 465-476 (2015).
    • (2015) J. Clin. Microbiol. , vol.53 , Issue.2 , pp. 465-476
    • Triest, D.1    Stubbe, D.2    De Cremer, K.3
  • 24
    • 3442882259 scopus 로고    scopus 로고
    • FUSARIUM-ID v. 1.0, A DNA sequence database for identifying Fusarium
    • Geiser DM, Jimenez-Gasco M, Kang S et al. FUSARIUM-ID v. 1.0, A DNA sequence database for identifying Fusarium. Eur. J. Plant Pathol. 110, 473-479 (2004).
    • (2004) Eur. J. Plant Pathol. , vol.110 , pp. 473-479
    • Geiser, D.M.1    Jimenez-Gasco, M.2    Kang, S.3
  • 25
    • 84875868439 scopus 로고    scopus 로고
    • Assessment of various parameters to improve MALDI-TOF MS reference spectra libraries constructed for routine identification of filamentous fungi
    • Normand A-C, Cassagne C, Ranque S et al. Assessment of various parameters to improve MALDI-TOF MS reference spectra libraries constructed for routine identification of filamentous fungi. BMC Microbiol. 13, 76 (2013).
    • (2013) BMC Microbiol. , vol.13 , pp. 76
    • Normand, A.-C.1    Cassagne, C.2    Ranque, S.3
  • 26
    • 84920771927 scopus 로고    scopus 로고
    • Keratitis by Fusarium temperatum a novel opportunist
    • Al-Hatmi AM, Bonifaz A, de Hoog GS et al. Keratitis by Fusarium temperatum a novel opportunist. BMC Infect. Dis. 14(1), 588 (2014).
    • (2014) BMC Infect. Dis. , vol.14 , Issue.1 , pp. 588
    • Al-Hatmi, A.M.1    Bonifaz, A.2    De Hoog, G.S.3
  • 27
    • 84948427898 scopus 로고    scopus 로고
    • MAFFT version 7
    • MAFFT version 7. http://mafft.cbrc.jp/alignment/software/
  • 28
    • 84948395049 scopus 로고    scopus 로고
    • The CIPRES Science Gateway V. 3.3
    • The CIPRES Science Gateway V. 3.3. http://www.phylo.org
  • 29
    • 79953869376 scopus 로고    scopus 로고
    • Performance and cost analysis of matrix-assisted laser desorption ionization-time of flight mass spectrometry for routine identification of yeast
    • Dhiman N, Hall L, Wohlfiel SL, Buckwalter SP, Wengenack NL. Performance and cost analysis of matrix-assisted laser desorption ionization-time of flight mass spectrometry for routine identification of yeast. J. Clin. Microbiol. 49(4), 1614-1616 (2011).
    • (2011) J. Clin. Microbiol. , vol.49 , Issue.4 , pp. 1614-1616
    • Dhiman, N.1    Hall, L.2    Wohlfiel, S.L.3    Buckwalter, S.P.4    Wengenack, N.L.5
  • 30
    • 84904424927 scopus 로고    scopus 로고
    • Identification of Leishmania at the species level with matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    • Cassagne C, Pratlong F, Jeddi F et al. Identification of Leishmania at the species level with matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin. Microbiol. Infect. 20(6), 551-557 (2014).
    • (2014) Clin. Microbiol. Infect. , vol.20 , Issue.6 , pp. 551-557
    • Cassagne, C.1    Pratlong, F.2    Jeddi, F.3
  • 31
    • 84880315641 scopus 로고    scopus 로고
    • Identification of the Trichophyton mentagrophytes complex species using MALDI-TOF mass spectrometry
    • Packeu A, Hendrickx M, Beguin H, Martiny D, Vandenberg O, Detandt M. Identification of the Trichophyton mentagrophytes complex species using MALDI-TOF mass spectrometry. Med. Mycol. 51(6), 580-585 (2013).
    • (2013) Med. Mycol. , vol.51 , Issue.6 , pp. 580-585
    • Packeu, A.1    Hendrickx, M.2    Beguin, H.3    Martiny, D.4    Vandenberg, O.5    Detandt, M.6
  • 32
    • 84893365055 scopus 로고    scopus 로고
    • Identification of fungal microorganisms by MALDI-TOF mass spectrometry
    • Chalupovaá J, Rausa M, Sedlaóváb M, Šebela M. Identification of fungal microorganisms by MALDI-TOF mass spectrometry. Biotechnol. Adv. 32(1), 230-41 (2014).
    • (2014) Biotechnol. Adv. , vol.32 , Issue.1 , pp. 230-241
    • Chalupovaá, J.1    Rausa, M.2    Sedlaóváb, M.3    Šebela, M.4
  • 33
    • 78651313328 scopus 로고    scopus 로고
    • Cyber infrastructure for Fusarium: Three integrated platforms supporting strain identification, phylogenetics, comparative genomics and knowledge sharing
    • Park B, Park J, Cheong K-C et al. Cyber infrastructure for Fusarium: three integrated platforms supporting strain identification, phylogenetics, comparative genomics and knowledge sharing. Nucl. Acids Res. 39(1), 640-646 (2011).
    • (2011) Nucl. Acids Res. , vol.39 , Issue.1 , pp. 640-646
    • Park, B.1    Park, J.2    Cheong, K.-C.3
  • 35
    • 84954280778 scopus 로고    scopus 로고
    • Evaluation of two novel barcodes for species recognition of opportunistic pathogens in Fusarium
    • Epub ahead of print
    • Al-Hatmi AM, Gerrits van den Ende AHG, Stielow JB et al. Evaluation of two novel barcodes for species recognition of opportunistic pathogens in Fusarium. Fungal Biol. (2015) (doi: 10.1016/j. funbio.2015.08.006) (Epub ahead of print).
    • (2015) Fungal Biol.
    • Al-Hatmi, A.M.1    Gerrits Van Den Ende, A.H.G.2    Stielow, J.B.3
  • 36
    • 84925372875 scopus 로고    scopus 로고
    • Banana infecting fungus, Fusarium musae is also an opportunistic human pathogen: Are bananas potential carriers and source of fusariosis
    • Triest D, Stubbe D, De Cremer K et al. Banana infecting fungus, Fusarium musae is also an opportunistic human pathogen: are bananas potential carriers and source of fusariosis. Mycologia 107(1), 46-53 (2015).
    • (2015) Mycologia , vol.107 , Issue.1 , pp. 46-53
    • Triest, D.1    Stubbe, D.2    De Cremer, K.3
  • 37
    • 84954387728 scopus 로고    scopus 로고
    • DNA barcoding MALDI-TOF and AFLP data support Fusarium ficicrescens as a distinct species within the F. Fujikuroi species complex
    • Al-Hatmi AM, Mirabolfathy M, Hagen F et al. DNA barcoding, MALDI-TOF and AFLP data support Fusarium ficicrescens as a distinct species within the F. fujikuroi species complex. Fungal Biol. (2015). http://dx.doi.org
    • (2015) Fungal Biol.
    • Al-Hatmi, A.M.1    Mirabolfathy, M.2    Hagen, F.3
  • 38
    • 84893801619 scopus 로고    scopus 로고
    • MALDI-TOF mass spectrometry identification of filamentous fungi in the clinical laboratory
    • Ranque S, Normand AC, Cassagne C et al. MALDI-TOF mass spectrometry identification of filamentous fungi in the clinical laboratory. Mycoses 57(3), 135-140 (2014).
    • (2014) Mycoses , vol.57 , Issue.3 , pp. 135-140
    • Ranque, S.1    Normand, A.C.2    Cassagne, C.3
  • 39
    • 77958566200 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization time-of-flight mass spectrometry: Usefulness for taxonomy and epidemiology
    • Murray PR. Matrix-assisted laser desorption ionization time-of-flight mass spectrometry: usefulness for taxonomy and epidemiology. Clin. Microbiol. Infect. 16(11), 1626-1630 (2010).
    • (2010) Clin. Microbiol. Infect. , vol.16 , Issue.11 , pp. 1626-1630
    • Murray, P.R.1
  • 40
    • 0026625083 scopus 로고
    • Mapping and sequence-specific identification of phosphopeptides in unfractionated protein digest mixtures by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    • Yip TT, Hutchens TW. Mapping and sequence-specific identification of phosphopeptides in unfractionated protein digest mixtures by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. FEBS Lett. 308(2), 149-153 (1992).
    • (1992) FEBS Lett. , vol.308 , Issue.2 , pp. 149-153
    • Yip, T.T.1    Hutchens, T.W.2
  • 41
    • 84856763848 scopus 로고    scopus 로고
    • Applications of MALDI-TOF mass spectrometry in clinical diagnostic microbiology
    • Croxatto A, Prod'hom G, Greub G. Applications of MALDI-TOF mass spectrometry in clinical diagnostic microbiology. FEMS Microbiol. Rev. 36(2), 380-407 (2012).
    • (2012) FEMS Microbiol. Rev. , vol.36 , Issue.2 , pp. 380-407
    • Croxatto, A.1    Prod'Hom, G.2    Greub, G.3
  • 42
    • 84865088481 scopus 로고    scopus 로고
    • What is new in clinical microbiology-microbial identification by MALDI-TOF mass spectrometry: A paper from the 2011 William Beaumont Hospital Symposium on molecular pathology
    • Murray PR. What is new in clinical microbiology-microbial identification by MALDI-TOF mass spectrometry: a paper from the 2011 William Beaumont Hospital Symposium on molecular pathology. J. Mol. Diagn. 14(5), 419-423 (2012).
    • (2012) J. Mol. Diagn. , vol.14 , Issue.5 , pp. 419-423
    • Murray, P.R.1


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