FUSARIUM-ID v. 1.0: A DNA sequence database for identifying Fusarium

European Journal of Plant Pathology

Volumn 110, Issue 5-6, 2004, Pages 473-479

  Geiser, David M ^a   Jiménez Gasco, María Del Mar ^a   Kang, Seogchan ^a   Makalowska, Izabela ^b   Veeraraghavan, Narayanan ^a,b   Ward, Todd J ^c   Zhang, Ning ^a   Kuldau, Gretchen A ^a   O'Donnell, Kerry ^c  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

^b PENNSYLVANIA STATE UNIVERSITY   (United States)

^c NATIONAL CENTER FOR AGRICULTURAL UTILIZATION RESEARCH   (United States)

Author keywords

Fumonisin; Fusarium; Translation elongation factor; Trichothecene toxin

Indexed keywords

DATABASE; DNA; FUNGUS; IDENTIFICATION METHOD; TOXIN;

ERAGROSTIS TEF; FUNGI; FUSARIUM; FUSARIUM OXYSPORUM; FUSARIUM SOLANI; GIBBERELLA; GIBBERELLA FUJIKUROI; MYXOGASTRIA;

EID: 3442882259     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1023/B:EJPP.0000032386.75915.a0     Document Type: Article

References (23)

1. Aoki T and O'Donnell KL (1998) Fusarium kyushuense sp. nov. from Japan. Mycoscience 39: 1-6.
2. Aoki T and O'Donnell K (1999) Morphological and molecular characterization of Fusarium pseudograminearum sp nov., formerly recognized as the Group 1 population of F. graminearum. Mycologia 91: 597-609.
3. Aoki T, O'Donnell K, Homma Y and Lattanzi AR (2003) Sudden-death syndrome of soybean is caused by two morphologically and phylogenetically distinct species within the Fusarium solani species complex - F. virguliforme in North America and F. tucumaniae in South America. Mycologia 95: 660-684.
4. Cho SW, Mitchell A, Regier JC, Mitter C, Poole RW, Friedlander TP and Zhao SW (1995) A highly conserved nuclear gene for low-level phylogenetics - Elongation Factor-1-Alpha recovers morphology-based tree for Heliothine moths. Molecular Biology and Evolution 12: 650-656.
5. Fessehaie A, De Boer SH and Levesque CA (2003) An oligonucleotide array for the identification and differentiation of bacteria pathogenic on potato. Phytopathology 93: 262-269.
6. Geiser DM (2003) Practical molecular taxonomy of fungi. In: Lange L and Tkacz J (eds) Advances in Fungal Biotechnology for Industry, Medicine and Agriculture, Kluwer Academic Publishers, Dordrecht, The Netherlands.
7. Geiser DM, Juba JH, Wang B and Jeffers SN (2001) Fusarium hostae sp nov., a relative of F. redolens with a Gibberella teleomorph. Mycologia 93: 670-678.
8. Marasas WFO, Nelson PE and Toussoun TA (1984) Toxigenic Fusarium Species: Identity and Mycotoxicology. Penn State University Press, University Park, PA 328 pp.
9. Mitchell A, Cho S, Regier JC, Mitter C, Poole RW and Matthews M (1997) Phylogenetic utility of elongation factor-1 alpha in Noctuoidea (Insecta: Lepidoptera): The limits of synonymous substitution. Molecular Biology and Evolution 14: 381-390.
10. O'Donnell K (2000) Molecular phylogeny of the Nectria haematococca-Fusarium solani species complex. Mycologia 92: 919-938.
11. O'Donnell K and Cigelnik E (1997) Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Molecular and Phylogenetic Evolution 7: 103-116.
12. O'Donnell K, Cigelnik E, Weber NS and Trappe JM (1997) Phylogenetic relationships among ascomycetous truffles and the true and false morels from 18S and 28S ribosomal DNA sequence analysis. Mycologia 89: 48-65.
13. O'Donnell K, Cigelnik E and Nirenberg HI (1998a) Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90: 465-493.
14. O'Donnell K, Cigelnik E and Casper HH (1998b) Molecular phylogenetic, morphological, and mycotoxin data support reidentification of the Quorn mycoprotein fungus as Fusarium venenatum. Fungal Genetics and Biology 23: 57-67.
15. O'Donnell K, Kistler HC, Cigelnik E and Ploetz RC (1998c) Multiple evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies. Proceedings of the National Academy of Sciences of the United States of America 95: 2044-2049.
16. O'Donnell K, Nirenberg HI, Aoki T and Cigelnik E (2000a) A multigene phylogeny of the Gibberella fujikuroi species complex: Detection of additional phylogenetically distinct species. Mycoscience 41: 61-78.
17. O'Donnell K, Kistler HC, Tacke BK and Casper HH (2000b) Gene genealogies reveal global phylogeographic structure and reproductive isolation among lineages of Fusarium graminearum, the fungus causing wheat scab. Proceedings of the National Academy of Sciences of the United States of America 97: 7905-7910.
18. Snyder WC and Hansen HN (1940) The species concept in Fusarium. American Journal of Botany 27: 64-67.
19. Snyder WC and Hansen HN (1941) The species concept in Fusarium with reference to section Martiella. American Journal of Botany 28: 738-742.
20. Snyder WC and Hansen HN (1945) The species concept in Fusarium with reference to Discolor and other sections. American Journal of Botany 32: 657-666.
21. Summerell BA, Salleh B and Leslie JF (2003) A utilitarian approach to Fusarium identification. Plant Disease 87: 117-128.
22. Taylor JW, Jacobson DJ, Kroken S, Kasuga T, Geiser DM, Hibbett DS and Fisher MC (2000) Phylogenetic species recognition and species concepts in fungi. Fungal Genetics and Biology 31: 21-32.
23. Ward TJ, Bielawski JP, Kistler HC, Sullivan E and O'Donnell K (2002) Ancestral polymorphism and adaptive evolution in the trichothecene mycotoxin gene cluster of phytopathogenic Fusarium. Proceedings of the National Academy of Sciences of the United States of America 99: 9278-9283.