-
1
-
-
0034680102
-
Molecular portraits of human breast tumours
-
Perou CM, Sorlie T, Eisen MB, van de Rijn M, Jeffrey SS, Rees CA, et al. Molecular portraits of human breast tumours. Nature. 2000; 406:747-52.
-
(2000)
Nature
, vol.406
, pp. 747-752
-
-
Perou, C.M.1
Sorlie, T.2
Eisen, M.B.3
van de Rijn, M.4
Jeffrey, S.S.5
Rees, C.A.6
-
2
-
-
0035845511
-
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
-
Sorlie T, Perou CM, Tibshirani R, Aas T, Geisler S, Johnsen H, et al. Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications. Proc Natl Acad Sci U S A. 2001; 98:10869-74.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 10869-10874
-
-
Sorlie, T.1
Perou, C.M.2
Tibshirani, R.3
Aas, T.4
Geisler, S.5
Johnsen, H.6
-
3
-
-
0037478605
-
Repeated observation of breast tumor subtypes in independent gene expression data sets
-
Sorlie T, Tibshirani R, Parker J, Hastie T, Marron JS, Nobel A, et al. Repeated observation of breast tumor subtypes in independent gene expression data sets. Proc Natl Acad Sci U S A. 2003; 100:8418-23.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 8418-8423
-
-
Sorlie, T.1
Tibshirani, R.2
Parker, J.3
Hastie, T.4
Marron, J.S.5
Nobel, A.6
-
4
-
-
78049308800
-
Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer
-
Prat A, Parker JS, Karginova O, Fan C, Livasy C, Herschkowitz JI, et al. Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer. Breast Cancer Res. 2010; 12:R68.
-
(2010)
Breast Cancer Res
, vol.12
-
-
Prat, A.1
Parker, J.S.2
Karginova, O.3
Fan, C.4
Livasy, C.5
Herschkowitz, J.I.6
-
5
-
-
34548863946
-
Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors
-
Herschkowitz JI, Simin K, Weigman VJ, Mikaelian I, Usary J, Hu Z, et al. Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors. Genome Biol. 2007; 8:R76.
-
(2007)
Genome Biol
, vol.8
-
-
Herschkowitz, J.I.1
Simin, K.2
Weigman, V.J.3
Mikaelian, I.4
Usary, J.5
Hu, Z.6
-
6
-
-
84887398348
-
Transcriptomic classification of genetically engineered mouse models of breast cancer identifies human subtype counterparts
-
Pfefferle AD, Herschkowitz JI, Usary J, Harrell JC, Spike BT, Adams JR, et al. Transcriptomic classification of genetically engineered mouse models of breast cancer identifies human subtype counterparts. Genome Biol. 2013; 14:R125.
-
(2013)
Genome Biol
, vol.14
-
-
Pfefferle, A.D.1
Herschkowitz, J.I.2
Usary, J.3
Harrell, J.C.4
Spike, B.T.5
Adams, J.R.6
-
7
-
-
84901982281
-
A genomic analysis of mouse models of breast cancer reveals molecular features of mouse models and relationships to human breast cancer
-
Hollern DP, Andrechek E. A genomic analysis of mouse models of breast cancer reveals molecular features of mouse models and relationships to human breast cancer. Breast Cancer Res. 2014; 16:R59.
-
(2014)
Breast Cancer Res
, vol.16
-
-
Hollern, D.P.1
Andrechek, E.2
-
8
-
-
67449110972
-
Breast cancer metastasis: challenges and opportunities
-
Lu J, Steeg PS, Price JE, Krishnamurthy S, Mani SA, Reuben J, et al. Breast cancer metastasis: challenges and opportunities. Cancer Res. 2009; 69:4951-3.
-
(2009)
Cancer Res
, vol.69
, pp. 4951-4953
-
-
Lu, J.1
Steeg, P.S.2
Price, J.E.3
Krishnamurthy, S.4
Mani, S.A.5
Reuben, J.6
-
9
-
-
0038662614
-
Metastasis suppressor genes: basic biology and potential clinical use
-
Steeg PS, Ouatas T, Halverson D, Palmieri D, Salerno M. Metastasis suppressor genes: basic biology and potential clinical use. Clin Breast Cancer. 2003; 4:51-62.
-
(2003)
Clin Breast Cancer
, vol.4
, pp. 51-62
-
-
Steeg, P.S.1
Ouatas, T.2
Halverson, D.3
Palmieri, D.4
Salerno, M.5
-
11
-
-
63049090100
-
Metastasis: from dissemination to organ-specific colonization
-
Nguyen DX, Bos PD, Massague J. Metastasis: from dissemination to organ-specific colonization. Nat Rev Cancer. 2009; 9:274-84.
-
(2009)
Nat Rev Cancer
, vol.9
, pp. 274-284
-
-
Nguyen, D.X.1
Bos, P.D.2
Massague, J.3
-
12
-
-
0026587657
-
Induction of mammary tumors by expression of polyomavirus middle T oncogene: a transgenic mouse model for metastatic disease
-
Guy CT, Cardiff RD, Muller WJ. Induction of mammary tumors by expression of polyomavirus middle T oncogene: a transgenic mouse model for metastatic disease. Mol Cell Biol. 1992; 12:954-61.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 954-961
-
-
Guy, C.T.1
Cardiff, R.D.2
Muller, W.J.3
-
13
-
-
84925582075
-
The E2F transcription factors regulate tumor development and metastasis in a mouse model of metastatic breast cancer
-
Hollern DP, Honeysett J, Cardiff RD, Andrechek ER. The E2F transcription factors regulate tumor development and metastasis in a mouse model of metastatic breast cancer. Mol Cell Biol. 2014; 34:3229-43.
-
(2014)
Mol Cell Biol
, vol.34
, pp. 3229-3243
-
-
Hollern, D.P.1
Honeysett, J.2
Cardiff, R.D.3
Andrechek, E.R.4
-
14
-
-
0021720781
-
Spontaneous mammary adenocarcinomas in transgenic mice that carry and express MTV/Myc fusion genes
-
Stewart TA, Pattengale PK, Leder P. Spontaneous mammary adenocarcinomas in transgenic mice that carry and express MTV/Myc fusion genes. Cell. 1984; 38:627-37.
-
(1984)
Cell
, vol.38
, pp. 627-637
-
-
Stewart, T.A.1
Pattengale, P.K.2
Leder, P.3
-
15
-
-
0031056820
-
Differential regulation of cell cycle characteristics and apoptosis in MMTV-Myc and MMTV-ras mouse mammary tumors
-
Hundley JE, Koester SK, Troyer DA, Hilsenbeck SG, Barrington RE, Windle JJ. Differential regulation of cell cycle characteristics and apoptosis in MMTV-Myc and MMTV-ras mouse mammary tumors. Cancer Res. 1997; 57:600-3.
-
(1997)
Cancer Res
, vol.57
, pp. 600-603
-
-
Hundley, J.E.1
Koester, S.K.2
Troyer, D.A.3
Hilsenbeck, S.G.4
Barrington, R.E.5
Windle, J.J.6
-
16
-
-
0029041534
-
Synergistic interaction of transforming growth factor alpha and c-Myc in mouse mammary and salivary gland tumorigenesis
-
Amundadottir LT, Johnson MD, Merlino G, Smith GH, Dickson RB. Synergistic interaction of transforming growth factor alpha and c-Myc in mouse mammary and salivary gland tumorigenesis. Cell growth & differentiation: the molecular biology journal of the American Association for Cancer Research. 1995; 6:737-48.
-
(1995)
Cell growth & differentiation: the molecular biology journal of the American Association for Cancer Research
, vol.6
, pp. 737-748
-
-
Amundadottir, L.T.1
Johnson, M.D.2
Merlino, G.3
Smith, G.H.4
Dickson, R.B.5
-
17
-
-
51649085736
-
Identification of VEGF-regulated genes associated with increased lung metastatic potential: functional involvement of tenascin-C in tumor growth and lung metastasis
-
Calvo A, Catena R, Noble MS, Carbott D, Gil-Bazo I, Gonzalez-Moreno O, et al. Identification of VEGF-regulated genes associated with increased lung metastatic potential: functional involvement of tenascin-C in tumor growth and lung metastasis. Oncogene. 2008; 27:5373-84.
-
(2008)
Oncogene
, vol.27
, pp. 5373-5384
-
-
Calvo, A.1
Catena, R.2
Noble, M.S.3
Carbott, D.4
Gil-Bazo, I.5
Gonzalez-Moreno, O.6
-
19
-
-
0035063183
-
The Rb/E2F pathway and cancer
-
Nevins JR. The Rb/E2F pathway and cancer. Hum Mol Genet. 2001; 10:699-703.
-
(2001)
Hum Mol Genet
, vol.10
, pp. 699-703
-
-
Nevins, J.R.1
-
21
-
-
70350518233
-
Emerging roles of E2Fs in cancer: an exit from cell cycle control
-
Chen HZ, Tsai SY, Leone G. Emerging roles of E2Fs in cancer: an exit from cell cycle control. Nat Rev Cancer. 2009; 9:785-97.
-
(2009)
Nat Rev Cancer
, vol.9
, pp. 785-797
-
-
Chen, H.Z.1
Tsai, S.Y.2
Leone, G.3
-
22
-
-
84890330004
-
E2F1 promotes angiogenesis through the VEGF-C/VEGFR-3 axis in a feedback loop for cooperative induction of PDGF-B
-
Engelmann D, Mayoli-Nussle D, Mayrhofer C, Furst K, Alla V, Stoll A, et al. E2F1 promotes angiogenesis through the VEGF-C/VEGFR-3 axis in a feedback loop for cooperative induction of PDGF-B. J Mol Cell Biol. 2013; 5:391-403.
-
(2013)
J Mol Cell Biol
, vol.5
, pp. 391-403
-
-
Engelmann, D.1
Mayoli-Nussle, D.2
Mayrhofer, C.3
Furst, K.4
Alla, V.5
Stoll, A.6
-
23
-
-
49049094430
-
Evidence of a tumour suppressive function of E2F1 gene in human breast cancer
-
Worku D, Jouhra F, Jiang GW, Patani N, Newbold RF, Mokbel K. Evidence of a tumour suppressive function of E2F1 gene in human breast cancer. Anticancer Res. 2008; 28:2135-9.
-
(2008)
Anticancer Res
, vol.28
, pp. 2135-2139
-
-
Worku, D.1
Jouhra, F.2
Jiang, G.W.3
Patani, N.4
Newbold, R.F.5
Mokbel, K.6
-
24
-
-
0035166496
-
Expression of E2F-1 and E2F-4 is reduced in primary and metastatic breast carcinomas
-
Ho GH, Calvano JE, Bisogna M, Van Zee KJ. Expression of E2F-1 and E2F-4 is reduced in primary and metastatic breast carcinomas. Breast Cancer Res Treat. 2001; 69:115-22.
-
(2001)
Breast Cancer Res Treat
, vol.69
, pp. 115-122
-
-
Ho, G.H.1
Calvano, J.E.2
Bisogna, M.3
Van Zee, K.J.4
-
25
-
-
0345003786
-
Deletion mapping of chromosomal region 1p32-pter in primary breast cancer
-
Bieche I, Khodja A, Lidereau R. Deletion mapping of chromosomal region 1p32-pter in primary breast cancer. Genes Chromosomes Cancer. 1999; 24:255-63.
-
(1999)
Genes Chromosomes Cancer
, vol.24
, pp. 255-263
-
-
Bieche, I.1
Khodja, A.2
Lidereau, R.3
-
26
-
-
70349496099
-
Genetic heterogeneity of Myc-induced mammary tumors reflecting diverse phenotypes including metastatic potential
-
Andrechek ER, Cardiff RD, Chang JT, Gatza ML, Acharya CR, Potti A, et al. Genetic heterogeneity of Myc-induced mammary tumors reflecting diverse phenotypes including metastatic potential. Proc Natl Acad Sci U S A. 2009; 106:16387-92.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 16387-16392
-
-
Andrechek, E.R.1
Cardiff, R.D.2
Chang, J.T.3
Gatza, M.L.4
Acharya, C.R.5
Potti, A.6
-
27
-
-
84890470353
-
HER2/Neu tumorigenesis and metastasis is regulated by E2F activator transcription factors
-
Andrechek ER. HER2/Neu tumorigenesis and metastasis is regulated by E2F activator transcription factors. Oncogene. 2015; 34:217-25.
-
(2015)
Oncogene
, vol.34
, pp. 217-225
-
-
Andrechek, E.R.1
-
28
-
-
79952221879
-
Prediction and Genetic Demonstration of a Role for Activator E2Fs in Myc-Induced Tumors
-
Fujiwara K, Yuwanita I, Hollern DP, Andrechek ER. Prediction and Genetic Demonstration of a Role for Activator E2Fs in Myc-Induced Tumors. Cancer Res. 2011; 71:1924-32.
-
(2011)
Cancer Res
, vol.71
, pp. 1924-1932
-
-
Fujiwara, K.1
Yuwanita, I.2
Hollern, D.P.3
Andrechek, E.R.4
-
29
-
-
84964314758
-
Selective roles of E2Fs for ErbB2-and Myc-mediated mammary tumorigenesis
-
Wu L, de Bruin A, Wang H, Simmons T, Cleghorn W, Goldenberg LE, et al. Selective roles of E2Fs for ErbB2-and Myc-mediated mammary tumorigenesis. Oncogene. 2015; 34:119-28.
-
(2015)
Oncogene
, vol.34
, pp. 119-128
-
-
Wu, L.1
de Bruin, A.2
Wang, H.3
Simmons, T.4
Cleghorn, W.5
Goldenberg, L.E.6
-
30
-
-
84862907531
-
Regulation of matrix metalloproteinase genes by E2F transcription factors: Rb-Raf-1 interaction as a novel target for metastatic disease
-
Johnson JL, Pillai S, Pernazza D, Sebti SM, Lawrence NJ, Chellappan SP. Regulation of matrix metalloproteinase genes by E2F transcription factors: Rb-Raf-1 interaction as a novel target for metastatic disease. Cancer Res. 2012; 72:516-26.
-
(2012)
Cancer Res
, vol.72
, pp. 516-526
-
-
Johnson, J.L.1
Pillai, S.2
Pernazza, D.3
Sebti, S.M.4
Lawrence, N.J.5
Chellappan, S.P.6
-
31
-
-
84907942931
-
Association of RHAMM with E2F1 promotes tumour cell extravasation by transcriptional up-regulation of fibronectin
-
Meier C, Spitschak A, Abshagen K, Gupta S, Mor JM, Wolkenhauer O, et al. Association of RHAMM with E2F1 promotes tumour cell extravasation by transcriptional up-regulation of fibronectin. J Pathol. 2014; 234:351-64.
-
(2014)
J Pathol
, vol.234
, pp. 351-364
-
-
Meier, C.1
Spitschak, A.2
Abshagen, K.3
Gupta, S.4
Mor, J.M.5
Wolkenhauer, O.6
-
32
-
-
84877028141
-
Comprehensive molecular portraits of human breast tumours
-
Oct 4
-
Network TCGA. Comprehensive molecular portraits of human breast tumours. Nature. 2012; Oct 4;490:61-70.
-
(2012)
Nature
, vol.490
, pp. 61-70
-
-
-
33
-
-
67249088143
-
The tyrosine phosphatase PTPRD is a tumor suppressor that is frequently inactivated and mutated in glioblastoma and other human cancers
-
Veeriah S, Brennan C, Meng S, Singh B, Fagin JA, Solit DB, et al. The tyrosine phosphatase PTPRD is a tumor suppressor that is frequently inactivated and mutated in glioblastoma and other human cancers. Proc Natl Acad Sci U S A. 2009; 106:9435-40.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 9435-9440
-
-
Veeriah, S.1
Brennan, C.2
Meng, S.3
Singh, B.4
Fagin, J.A.5
Solit, D.B.6
-
34
-
-
84901854064
-
Loss of the tyrosine phosphatase PTPRD leads to aberrant STAT3 activation and promotes gliomagenesis
-
Ortiz B, Fabius AW, Wu WH, Pedraza A, Brennan CW, Schultz N, et al. Loss of the tyrosine phosphatase PTPRD leads to aberrant STAT3 activation and promotes gliomagenesis. Proc Natl Acad Sci U S A. 2014; 111:8149-54.
-
(2014)
Proc Natl Acad Sci U S A
, vol.111
, pp. 8149-8154
-
-
Ortiz, B.1
Fabius, A.W.2
Wu, W.H.3
Pedraza, A.4
Brennan, C.W.5
Schultz, N.6
-
35
-
-
67650999875
-
The basics of epithelial-mesenchymal transition
-
Kalluri R, Weinberg RA. The basics of epithelial-mesenchymal transition. J Clin Invest. 2009; 119:1420-8.
-
(2009)
J Clin Invest
, vol.119
, pp. 1420-1428
-
-
Kalluri, R.1
Weinberg, R.A.2
-
37
-
-
84857781883
-
MYC gene amplification is often acquired in lethal distant breast cancer metastases of unamplified primary tumors
-
Singhi AD, Cimino-Mathews A, Jenkins RB, Lan F, Fink SR, Nassar H, et al. MYC gene amplification is often acquired in lethal distant breast cancer metastases of unamplified primary tumors. Mod Pathol. 2012; 25:378-87.
-
(2012)
Mod Pathol
, vol.25
, pp. 378-387
-
-
Singhi, A.D.1
Cimino-Mathews, A.2
Jenkins, R.B.3
Lan, F.4
Fink, S.R.5
Nassar, H.6
-
38
-
-
33846283395
-
Compensation and specificity of function within the E2F family
-
Kong LJ, Chang JT, Bild AH, Nevins JR. Compensation and specificity of function within the E2F family. Oncogene. 2007; 26:321-7.
-
(2007)
Oncogene
, vol.26
, pp. 321-327
-
-
Kong, L.J.1
Chang, J.T.2
Bild, A.H.3
Nevins, J.R.4
-
39
-
-
0032853554
-
Distant metastases in ovarian cancer: association with p53 mutations
-
Sood AK, Sorosky JI, Dolan M, Anderson B, Buller RE. Distant metastases in ovarian cancer: association with p53 mutations. Clin Cancer Res. 1999; 5:2485-90.
-
(1999)
Clin Cancer Res
, vol.5
, pp. 2485-2490
-
-
Sood, A.K.1
Sorosky, J.I.2
Dolan, M.3
Anderson, B.4
Buller, R.E.5
-
41
-
-
57749106582
-
Mutational inactivation of PTPRD in glioblastoma multiforme and malignant melanoma
-
Solomon DA, Kim JS, Cronin JC, Sibenaller Z, Ryken T, Rosenberg SA, et al. Mutational inactivation of PTPRD in glioblastoma multiforme and malignant melanoma. Cancer Res. 2008; 68:10300-6.
-
(2008)
Cancer Res
, vol.68
, pp. 10300-10306
-
-
Solomon, D.A.1
Kim, J.S.2
Cronin, J.C.3
Sibenaller, Z.4
Ryken, T.5
Rosenberg, S.A.6
-
43
-
-
44449094545
-
Convergence of mutation and epigenetic alterations identifies common genes in cancer that predict for poor prognosis
-
Chan TA, Glockner S, Yi JM, Chen W, Van Neste L, Cope L, et al. Convergence of mutation and epigenetic alterations identifies common genes in cancer that predict for poor prognosis. PLoS medicine. 2008; 5:e114.
-
(2008)
PLoS medicine
, vol.5
-
-
Chan, T.A.1
Glockner, S.2
Yi, J.M.3
Chen, W.4
Van Neste, L.5
Cope, L.6
-
44
-
-
0033521595
-
STAT3 is required for the gp130-mediated full activation of the c-Myc gene
-
Kiuchi N, Nakajima K, Ichiba M, Fukada T, Narimatsu M, Mizuno K, et al. STAT3 is required for the gp130-mediated full activation of the c-Myc gene. J Exp Med. 1999; 189:63-73.
-
(1999)
J Exp Med
, vol.189
, pp. 63-73
-
-
Kiuchi, N.1
Nakajima, K.2
Ichiba, M.3
Fukada, T.4
Narimatsu, M.5
Mizuno, K.6
-
45
-
-
16844368861
-
Knockdown of STAT3 expression by RNA interference inhibits the induction of breast tumors in immunocompetent mice
-
Ling X, Arlinghaus RB. Knockdown of STAT3 expression by RNA interference inhibits the induction of breast tumors in immunocompetent mice. Cancer Res. 2005; 65:2532-6.
-
(2005)
Cancer Res
, vol.65
, pp. 2532-2536
-
-
Ling, X.1
Arlinghaus, R.B.2
-
46
-
-
0034722896
-
STAT proteins: novel molecular targets for cancer drug discovery
-
Turkson J, Jove R. STAT proteins: novel molecular targets for cancer drug discovery. Oncogene. 2000; 19:6613-26.
-
(2000)
Oncogene
, vol.19
, pp. 6613-6626
-
-
Turkson, J.1
Jove, R.2
-
47
-
-
0035912763
-
Stat3-mediated Myc expression is required for Src transformation and PDGF-induced mitogenesis
-
Bowman T, Broome MA, Sinibaldi D, Wharton W, Pledger WJ, Sedivy JM, et al. Stat3-mediated Myc expression is required for Src transformation and PDGF-induced mitogenesis. Proc Natl Acad Sci U S A. 2001; 98:7319-24.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 7319-7324
-
-
Bowman, T.1
Broome, M.A.2
Sinibaldi, D.3
Wharton, W.4
Pledger, W.J.5
Sedivy, J.M.6
-
48
-
-
0037023755
-
Signaling networks that link cell proliferation and cell fate
-
Sears RC, Nevins JR. Signaling networks that link cell proliferation and cell fate. J Biol Chem. 2002; 277:11617-20.
-
(2002)
J Biol Chem
, vol.277
, pp. 11617-11620
-
-
Sears, R.C.1
Nevins, J.R.2
-
49
-
-
0030995824
-
Myc and Ras collaborate in inducing accumulation of active cyclin E/Cdk2 and E2F
-
Leone G, DeGregori J, Sears R, Jakoi L, Nevins JR. Myc and Ras collaborate in inducing accumulation of active cyclin E/Cdk2 and E2F. Nature. 1997; 387:422-6.
-
(1997)
Nature
, vol.387
, pp. 422-426
-
-
Leone, G.1
DeGregori, J.2
Sears, R.3
Jakoi, L.4
Nevins, J.R.5
-
50
-
-
84861592850
-
MYC suppresses cancer metastasis by direct transcriptional silencing of alphav and beta3 integrin subunits
-
Liu H, Radisky DC, Yang D, Xu R, Radisky ES, Bissell MJ, et al. MYC suppresses cancer metastasis by direct transcriptional silencing of alphav and beta3 integrin subunits. Nat Cell Biol. 2012; 14:567-74.
-
(2012)
Nat Cell Biol
, vol.14
, pp. 567-574
-
-
Liu, H.1
Radisky, D.C.2
Yang, D.3
Xu, R.4
Radisky, E.S.5
Bissell, M.J.6
-
51
-
-
18244409134
-
Mutation of E2F2 in mice causes enhanced T lymphocyte proliferation, leading to the development of autoimmunity
-
Murga M, Fernandez-Capetillo O, Field SJ, Moreno B, Borlado LR, Fujiwara Y, et al. Mutation of E2F2 in mice causes enhanced T lymphocyte proliferation, leading to the development of autoimmunity. Immunity. 2001; 15:959-70.
-
(2001)
Immunity
, vol.15
, pp. 959-970
-
-
Murga, M.1
Fernandez-Capetillo, O.2
Field, S.J.3
Moreno, B.4
Borlado, L.R.5
Fujiwara, Y.6
-
52
-
-
79955120806
-
Retro-orbital injections in mice
-
Yardeni T, Eckhaus M, Morris HD, Huizing M, Hoogstraten-Miller S. Retro-orbital injections in mice. Lab animal. 2011; 40:155-60.
-
(2011)
Lab animal
, vol.40
, pp. 155-160
-
-
Yardeni, T.1
Eckhaus, M.2
Morris, H.D.3
Huizing, M.4
Hoogstraten-Miller, S.5
-
53
-
-
62549125109
-
High-Dimensional Sparse Factor Modeling: Applications in Gene Expression Genomics
-
Carvalho CM, Chang J, Lucas JE, Nevins JR, Wang Q, West M. High-Dimensional Sparse Factor Modeling: Applications in Gene Expression Genomics. J Am Stat Assoc. 2008; 103:1438-56.
-
(2008)
J Am Stat Assoc
, vol.103
, pp. 1438-1456
-
-
Carvalho, C.M.1
Chang, J.2
Lucas, J.E.3
Nevins, J.R.4
Wang, Q.5
West, M.6
-
54
-
-
0035949684
-
Predicting the clinical status of human breast cancer by using gene expression profiles
-
West M, Blanchette C, Dressman H, Huang E, Ishida S, Spang R, et al. Predicting the clinical status of human breast cancer by using gene expression profiles. Proc Natl Acad Sci U S A. 2001; 98:11462-7.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 11462-11467
-
-
West, M.1
Blanchette, C.2
Dressman, H.3
Huang, E.4
Ishida, S.5
Spang, R.6
-
55
-
-
31144459985
-
Oncogenic pathway signatures in human cancers as a guide to targeted therapies
-
Bild AH, Yao G, Chang JT, Wang Q, Potti A, Chasse D, et al. Oncogenic pathway signatures in human cancers as a guide to targeted therapies. Nature. 2006; 439:353-7.
-
(2006)
Nature
, vol.439
, pp. 353-357
-
-
Bild, A.H.1
Yao, G.2
Chang, J.T.3
Wang, Q.4
Potti, A.5
Chasse, D.6
-
56
-
-
77951083686
-
A pathway-based classification of human breast cancer
-
Gatza ML, Lucas JE, Barry WT, Kim JW, Wang Q, Crawford MD, et al. A pathway-based classification of human breast cancer. Proc Natl Acad Sci U S A. 2010; 107:6994-9.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 6994-6999
-
-
Gatza, M.L.1
Lucas, J.E.2
Barry, W.T.3
Kim, J.W.4
Wang, Q.5
Crawford, M.D.6
-
57
-
-
79151483638
-
An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients
-
Gyorffy B, Lanczky A, Eklund AC, Denkert C, Budczies J, Li Q, et al. An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients. Breast Cancer Res Treat. 2010; 123:725-31.
-
(2010)
Breast Cancer Res Treat
, vol.123
, pp. 725-731
-
-
Gyorffy, B.1
Lanczky, A.2
Eklund, A.C.3
Denkert, C.4
Budczies, J.5
Li, Q.6
-
58
-
-
84893181929
-
Online survival analysis software to assess the prognostic value of biomarkers using transcriptomic data in non-small-cell lung cancer
-
Gyorffy B, Surowiak P, Budczies J, Lanczky A. Online survival analysis software to assess the prognostic value of biomarkers using transcriptomic data in non-small-cell lung cancer. PLoS One. 2013; 8:e82241.
-
(2013)
PLoS One
, vol.8
-
-
Gyorffy, B.1
Surowiak, P.2
Budczies, J.3
Lanczky, A.4
-
59
-
-
77951940923
-
Gene selection in microarray survival studies under possibly non-proportional hazards
-
Dunkler D, Schemper M, Heinze G. Gene selection in microarray survival studies under possibly non-proportional hazards. Bioinformatics. 2010; 26:784-90.
-
(2010)
Bioinformatics
, vol.26
, pp. 784-790
-
-
Dunkler, D.1
Schemper, M.2
Heinze, G.3
-
60
-
-
33751384465
-
GATHER: a systems approach to interpreting genomic signatures
-
Chang JT, Nevins JR. GATHER: a systems approach to interpreting genomic signatures. Bioinformatics. 2006; 22:2926-33.
-
(2006)
Bioinformatics
, vol.22
, pp. 2926-2933
-
-
Chang, J.T.1
Nevins, J.R.2
-
61
-
-
33846067980
-
SwissRegulon: a database of genome-wide annotations of regulatory sites
-
Pachkov M, Erb I, Molina N, van Nimwegen E. SwissRegulon: a database of genome-wide annotations of regulatory sites. Nucleic Acids Res. 2007; 35:D127-31.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. D127-D131
-
-
Pachkov, M.1
Erb, I.2
Molina, N.3
van Nimwegen, E.4
-
62
-
-
27344435774
-
Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles
-
Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, Gillette MA, et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci U S A. 2005; 102:15545-50.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
Gillette, M.A.6
-
63
-
-
84875740314
-
Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal
-
Gao J, Aksoy BA, Dogrusoz U, Dresdner G, Gross B, Sumer SO, et al. Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal. Science signaling. 2013; 6:pl1.
-
(2013)
Science signaling
, vol.6
, pp. pl1
-
-
Gao, J.1
Aksoy, B.A.2
Dogrusoz, U.3
Dresdner, G.4
Gross, B.5
Sumer, S.O.6
-
64
-
-
84866002291
-
The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data
-
Cerami E, Gao J, Dogrusoz U, Gross BE, Sumer SO, Aksoy BA, et al. The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data. Cancer discovery. 2012; 2:401-4.
-
(2012)
Cancer discovery
, vol.2
, pp. 401-404
-
-
Cerami, E.1
Gao, J.2
Dogrusoz, U.3
Gross, B.E.4
Sumer, S.O.5
Aksoy, B.A.6
-
65
-
-
77955469972
-
MLK3 is critical for breast cancer cell migration and promotes a malignant phenotype in mammary epithelial cells
-
Chen J, Miller EM, Gallo KA. MLK3 is critical for breast cancer cell migration and promotes a malignant phenotype in mammary epithelial cells. Oncogene. 2010; 29:4399-411.
-
(2010)
Oncogene
, vol.29
, pp. 4399-4411
-
-
Chen, J.1
Miller, E.M.2
Gallo, K.A.3
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