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Volumn 6, Issue OCTOBER, 2015, Pages

DNA maintenance in plastids and mitochondria of plants

Author keywords

Chloroplast DNA; DNA recombination; DNA repair; DNA replication; Organellar DNA

Indexed keywords


EID: 84947427080     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2015.00883     Document Type: Review
Times cited : (128)

References (122)
  • 1
    • 84877123228 scopus 로고    scopus 로고
    • The maintenance of mitochondrial DNA integrity-critical analysis and update
    • Alexeyev, M., Shokolenko, I., Wilson, G., and LeDoux, S. (2013). The maintenance of mitochondrial DNA integrity-critical analysis and update. Cold Spring Harb. Perspect. Biol. 5, a012641. doi: 10.1101/cshperspect.a012641
    • (2013) Cold Spring Harb. Perspect. Biol. , vol.5
    • Alexeyev, M.1    Shokolenko, I.2    Wilson, G.3    LeDoux, S.4
  • 2
    • 77952837838 scopus 로고    scopus 로고
    • Insights into the evolution of mitochondrial genome size from complete sequences ofCitrullus lanatus and Cucurbita pepo (Cucurbitaceae)
    • Alverson, A. J., Wei, X., Rice, D. W., Stern, D. B., Barry, K., and Palmer, J. D. (2010). Insights into the evolution of mitochondrial genome size from complete sequences ofCitrullus lanatus and Cucurbita pepo (Cucurbitaceae). Mol. Biol. Evol. 27, 1436-1448. doi: 10.1093/molbev/msq029
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 1436-1448
    • Alverson, A.J.1    Wei, X.2    Rice, D.W.3    Stern, D.B.4    Barry, K.5    Palmer, J.D.6
  • 3
    • 79751534186 scopus 로고    scopus 로고
    • Genotoxic stress and DNA repair in plants: Emerging functions and tools for improving crop productivity
    • Balestrazzi, A., Confalonieri, M., Macovei, A., Dona, M., and Carbonera, D. (2011). Genotoxic stress and DNA repair in plants: emerging functions and tools for improving crop productivity. Plant Cell Rep. 30, 287-295. doi: 10.1007/s00299-010-0975-9
    • (2011) Plant Cell Rep. , vol.30 , pp. 287-295
    • Balestrazzi, A.1    Confalonieri, M.2    McOvei, A.3    Dona, M.4    Carbonera, D.5
  • 4
    • 0001355547 scopus 로고
    • Plastid transcription activity and DNA copy number increase early in barley chloroplast development
    • Baumgartner, B. J., Rapp, J. C., and Mullet, J. E. (1989). Plastid transcription activity and DNA copy number increase early in barley chloroplast development. Plant Physiol. 89, 1011-1018. doi: 10.1104/pp.89.3.1011
    • (1989) Plant Physiol. , vol.89 , pp. 1011-1018
    • Baumgartner, B.J.1    Rapp, J.C.2    Mullet, J.E.3
  • 5
    • 0023359272 scopus 로고
    • Why do chloroplasts and mitochondria contain so many copies of their genome?
    • Bendich, A. J. (1987). Why do chloroplasts and mitochondria contain so many copies of their genome? Bioessays 6, 279-282. doi: 10.1002/bies.950060608
    • (1987) Bioessays , vol.6 , pp. 279-282
    • Bendich, A.J.1
  • 6
    • 0000515116 scopus 로고
    • Moving pictures of DNA released upon lysis from bacteria, chloroplasts, and mitochondria
    • Bendich, A. J. (1991). Moving pictures of DNA released upon lysis from bacteria, chloroplasts, and mitochondria. Protoplasma 160, 121-130. doi: 10.1007/BF01539964
    • (1991) Protoplasma , vol.160 , pp. 121-130
    • Bendich, A.J.1
  • 7
    • 0029870907 scopus 로고    scopus 로고
    • Structural analysis of mitochondrial DNA molecules from fungi and plants using moving pictures and pulsed-field gel electrophoresis
    • Bendich, A. J. (1996). Structural analysis of mitochondrial DNA molecules from fungi and plants using moving pictures and pulsed-field gel electrophoresis. J. Mol. Biol.255, 564-588. doi: 10.1006/jmbi.1996.0048
    • (1996) J. Mol. Biol. , vol.255 , pp. 564-588
    • Bendich, A.J.1
  • 8
    • 0035084878 scopus 로고    scopus 로고
    • The form of chromosomal DNA molecules in bacterial cells
    • Bendich, A. J. (2001). The form of chromosomal DNA molecules in bacterial cells.Biochimie 83, 177-186. doi: 10.1016/S0300-9084(00)01209-8
    • (2001) Biochimie , vol.83 , pp. 177-186
    • Bendich, A.J.1
  • 9
    • 34248578392 scopus 로고    scopus 로고
    • The size and form of chromosomes are constant in the nucleus, but highly variable in bacteria, mitochondria and chloroplasts
    • Bendich, A. J. (2007). The size and form of chromosomes are constant in the nucleus, but highly variable in bacteria, mitochondria and chloroplasts. Bioessays 29, 474-483. doi: 10.1002/bies.20576
    • (2007) Bioessays , vol.29 , pp. 474-483
    • Bendich, A.J.1
  • 10
    • 77956908672 scopus 로고    scopus 로고
    • The end of the circle for yeast mitochondrial DNA
    • Bendich, A. J. (2010a). The end of the circle for yeast mitochondrial DNA. Mol. Cell.39, 831-832. doi: 10.1016/j.molcel.2010.09.005
    • (2010) Mol. Cell. , vol.39 , pp. 831-832
    • Bendich, A.J.1
  • 11
    • 77953928286 scopus 로고    scopus 로고
    • Mitochondrial DNA, chloroplast DNA and the origins of development in eukaryotic organisms
    • Bendich, A. J. (2010b). Mitochondrial DNA, chloroplast DNA and the origins of development in eukaryotic organisms. Biol. Direct. 5, 42. doi: 10.1186/1745-6150-5-42
    • (2010) Biol. Direct. , vol.5 , pp. 42
    • Bendich, A.J.1
  • 12
    • 84878653913 scopus 로고    scopus 로고
    • DNA abandonment and the mechanisms of uniparental inheritance of mitochondria and chloroplasts
    • Bendich, A. J. (2013). DNA abandonment and the mechanisms of uniparental inheritance of mitochondria and chloroplasts. Chromosome Res. 21, 287-296. doi: 10.1007/s10577-013-9349-9
    • (2013) Chromosome Res. , vol.21 , pp. 287-296
    • Bendich, A.J.1
  • 13
    • 0025295755 scopus 로고
    • Moving pictures and pulsed-field gel electrophoresis show linear DNA molecules from chloroplasts and mitochondria
    • Bendich, A. J., and Smith, S. B. (1990). Moving pictures and pulsed-field gel electrophoresis show linear DNA molecules from chloroplasts and mitochondria.Curr. Genet. 17, 421-425. doi: 10.1007/BF00334522
    • (1990) Curr. Genet. , vol.17 , pp. 421-425
    • Bendich, A.J.1    Smith, S.B.2
  • 14
    • 78650744276 scopus 로고    scopus 로고
    • DNA repair in organelles: Pathways, organization, regulation, relevance in disease and aging
    • Boesch, P., Weber-Lotfi, F., Ibrahim, N., Tarasenko, V., Cosset, A., Paulus, F., et al. (2011). DNA repair in organelles: pathways, organization, regulation, relevance in disease and aging. Biochim. Biophys. Acta 1813, 186-200. doi: 10.1016/j.bbamcr.2010.10.002
    • (2011) Biochim. Biophys. Acta , vol.1813 , pp. 186-200
    • Boesch, P.1    Weber-Lotfi, F.2    Ibrahim, N.3    Tarasenko, V.4    Cosset, A.5    Paulus, F.6
  • 15
    • 78149372440 scopus 로고    scopus 로고
    • Fire and the spread of flowering plants in theCretaceous
    • Bond, W. J., and Scott, A. C. (2010). Fire and the spread of flowering plants in theCretaceous. New Phytol. 188, 1137-1150. doi: 10.1111/j.1469-8137.2010.03418.x
    • (2010) New Phytol. , vol.188 , pp. 1137-1150
    • Bond, W.J.1    Scott, A.C.2
  • 16
  • 17
    • 77955933529 scopus 로고    scopus 로고
    • Crystal structures of DNA-Whirly complexes and their role in Arabidopsisorganelle genome repair
    • Cappadocia, L., Marechal, A., Parent, J. S., Lepage, E., Sygusch, J., and Brisson, N. (2010). Crystal structures of DNA-Whirly complexes and their role in Arabidopsisorganelle genome repair. Plant Cell 22, 1849-1867. doi: 10.1105/tpc.109.071399
    • (2010) Plant Cell , vol.22 , pp. 1849-1867
    • Cappadocia, L.1    Marechal, A.2    Parent, J.S.3    Lepage, E.4    Sygusch, J.5    Brisson, N.6
  • 18
    • 84855293895 scopus 로고    scopus 로고
    • A conserved lysine residue of plant Whirly proteins is necessary for higher order protein assembly and protection against DNA damage
    • Cappadocia, L., Parent, J. S., Zampini, E., Lepage, E., Sygusch, J., and Brisson, N. (2012). A conserved lysine residue of plant Whirly proteins is necessary for higher order protein assembly and protection against DNA damage. Nucleic Acids Res. 40, 258-269. doi: 10.1093/nar/gkr740
    • (2012) Nucleic Acids Res. , vol.40 , pp. 258-269
    • Cappadocia, L.1    Parent, J.S.2    Zampini, E.3    Lepage, E.4    Sygusch, J.5    Brisson, N.6
  • 19
    • 84871779194 scopus 로고    scopus 로고
    • A reevaluation of dual-targeting of proteins to mitochondria and chloroplasts
    • Carrie, C., and Small, I. (2013). A reevaluation of dual-targeting of proteins to mitochondria and chloroplasts. Biochim. Biophys. Acta 1833, 253-259. doi: 10.1016/j.bbamcr.2012.05.029
    • (2013) Biochim. Biophys. Acta , vol.1833 , pp. 253-259
    • Carrie, C.1    Small, I.2
  • 20
    • 77957932997 scopus 로고    scopus 로고
    • Structure, function, and evolution of linear replicons in Borrelia
    • Chaconas, G., and Kobryn, K. (2010). Structure, function, and evolution of linear replicons in Borrelia. Annu. Rev. Microbiol. 64, 185-202. doi: 10.1146/annurev.micro.112408.134037
    • (2010) Annu. Rev. Microbiol. , vol.64 , pp. 185-202
    • Chaconas, G.1    Kobryn, K.2
  • 21
    • 0033797043 scopus 로고    scopus 로고
    • The effects of transcription and RNA processing on the initiation of chloroplast DNA replication in Chlamydomonas reinhardtii
    • Chang, C. H., and Wu, M. (2000). The effects of transcription and RNA processing on the initiation of chloroplast DNA replication in Chlamydomonas reinhardtii. Mol. Gen. Genet. 263, 320-327. doi: 10.1007/s004380051174
    • (2000) Mol. Gen. Genet. , vol.263 , pp. 320-327
    • Chang, C.H.1    Wu, M.2
  • 23
    • 0018428391 scopus 로고
    • Use of the fluorochrome 4′6-diamidino-2-phenylindole in genetic and developmental studies of chloroplast DNA
    • Coleman, A. W. (1979). Use of the fluorochrome 4′6-diamidino-2-phenylindole in genetic and developmental studies of chloroplast DNA. J. Cell Biol. 82, 299-305. doi: 10.1083/jcb.82.1.299
    • (1979) J. Cell Biol. , vol.82 , pp. 299-305
    • Coleman, A.W.1
  • 24
    • 33847778234 scopus 로고    scopus 로고
    • Motoring along with the bacterial RecA protein
    • Cox, M. M. (2007). Motoring along with the bacterial RecA protein. Nat. Rev. Mol. Cell Biol. 8, 127-138. doi: 10.1038/nrm2099
    • (2007) Nat. Rev. Mol. Cell Biol. , vol.8 , pp. 127-138
    • Cox, M.M.1
  • 25
    • 84914095411 scopus 로고    scopus 로고
    • Minireview: DNA replication in plant mitochondria
    • Cupp, J. D., and Nielsen, B. L. (2014). Minireview: DNA replication in plant mitochondria. Mitochondrion 19 Pt B, 231-237. doi: 10.1016/j.mito.2014.03.008
    • (2014) Mitochondrion , vol.19 , pp. 231-237
    • Cupp, J.D.1    Nielsen, B.L.2
  • 26
    • 24044551671 scopus 로고    scopus 로고
    • Structural and functional characterizations of mung bean mitochondrial nucleoids
    • Dai, H., Lo, Y. S., Litvinchuk, A., Wang, Y. T., Jane, W. N., Hsiao, L. J., et al. (2005). Structural and functional characterizations of mung bean mitochondrial nucleoids.Nucleic Acids Res. 33, 4725-4739. doi: 10.1093/nar/gki783
    • (2005) Nucleic Acids Res. , vol.33 , pp. 4725-4739
    • Dai, H.1    Lo, Y.S.2    Litvinchuk, A.3    Wang, Y.T.4    Jane, W.N.5    Hsiao, L.J.6
  • 27
    • 84879816054 scopus 로고    scopus 로고
    • Single-stranded DNA-binding proteins: Multiple domains for multiple functions
    • Dickey, T. H., Altschuler, S. E., and Wuttke, D. S. (2013). Single-stranded DNA-binding proteins: multiple domains for multiple functions. Structure 21, 1074-1084. doi: 10.1016/j.str.2013.05.013
    • (2013) Structure , vol.21 , pp. 1074-1084
    • Dickey, T.H.1    Altschuler, S.E.2    Wuttke, D.S.3
  • 28
    • 84874444815 scopus 로고    scopus 로고
    • TheArabidopsis At1g30680 gene encodes a homologue to the phage T7 gp4 protein that has both DNA primase and DNA helicase activities
    • Diray-Arce, J., Liu, B., Cupp, J. D., Hunt, T., and Nielsen, B. L. (2013). TheArabidopsis At1g30680 gene encodes a homologue to the phage T7 gp4 protein that has both DNA primase and DNA helicase activities. BMC Plant Biol. 13:36. doi: 10.1186/1471-2229-13-36
    • (2013) BMC Plant Biol. , vol.13 , pp. 36
    • Diray-Arce, J.1    Liu, B.2    Cupp, J.D.3    Hunt, T.4    Nielsen, B.L.5
  • 29
    • 0033571563 scopus 로고    scopus 로고
    • Cell cycling and cell enlargement in developing leaves of Arabidopsis
    • Donnelly, P. M., Bonetta, D., Tsukaya, H., Dengler, R. E., and Dengler, N. G. (1999). Cell cycling and cell enlargement in developing leaves of Arabidopsis. Dev. Biol. 215, 407-419. doi: 10.1006/dbio.1999.9443
    • (1999) Dev. Biol. , vol.215 , pp. 407-419
    • Donnelly, P.M.1    Bonetta, D.2    Tsukaya, H.3    Dengler, R.E.4    Dengler, N.G.5
  • 30
    • 2342511519 scopus 로고    scopus 로고
    • Chloroplast development affects expression of phage-type RNA polymerases in barley leaves
    • Emanuel, C., Weihe, A., Graner, A., Hess, W. R., and Börner, T. (2004). Chloroplast development affects expression of phage-type RNA polymerases in barley leaves.Plant J. 38, 460-472. doi: 10.1111/j.0960-7412.2004.02060.x
    • (2004) Plant J. , vol.38 , pp. 460-472
    • Emanuel, C.1    Weihe, A.2    Graner, A.3    Hess, W.R.4    Börner, T.5
  • 31
    • 84892610198 scopus 로고    scopus 로고
    • UvrD facilitates DNA repair by pulling RNA polymerase backwards
    • Epshtein, V., Kamarthapu, V., McGary, K., Svetlov, V., Ueberheide, B., Proshkin, S., et al. (2014). UvrD facilitates DNA repair by pulling RNA polymerase backwards.Nature 505, 372-377. doi: 10.1038/nature12928
    • (2014) Nature , vol.505 , pp. 372-377
    • Epshtein, V.1    Kamarthapu, V.2    McGary, K.3    Svetlov, V.4    Ueberheide, B.5    Proshkin, S.6
  • 32
    • 84896691528 scopus 로고    scopus 로고
    • The functions of WHIRLY1 and REDOX-RESPONSIVE TRANSCRIPTION FACTOR 1 in cross tolerance responses in plants: A hypothesis
    • Foyer, C. H., Karpinska, B., and Krupinska, K. (2014). The functions of WHIRLY1 and REDOX-RESPONSIVE TRANSCRIPTION FACTOR 1 in cross tolerance responses in plants: a hypothesis. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 369, 20130226. doi: 10.1098/rstb.2013.0226
    • (2014) Philos. Trans. R. Soc. Lond. B. Biol. Sci. , vol.369
    • Foyer, C.H.1    Karpinska, B.2    Krupinska, K.3
  • 33
    • 51249165163 scopus 로고
    • Studies on the behavior of organelles and their nucleoids in the root apical meristem of Arabidopsis thaliana (L.) Col
    • Fujie, M., Kuroiwa, H., Kawano, S., and Kuroiwa, T. (1993). Studies on the behavior of organelles and their nucleoids in the root apical meristem of Arabidopsis thaliana (L.) Col. Planta 189, 443-452. doi: 10.1007/BF00194444
    • (1993) Planta , vol.189 , pp. 443-452
    • Fujie, M.1    Kuroiwa, H.2    Kawano, S.3    Kuroiwa, T.4
  • 34
    • 0028004690 scopus 로고
    • Behavior of organelles and their nucleoids in the shoot apical meristem during leaf development inArabidopsis thaliana L
    • Fujie, M., Kuroiwa, H., Kawano, S., Mutoh, S., and Kuroiwa, T. (1994). Behavior of organelles and their nucleoids in the shoot apical meristem during leaf development inArabidopsis thaliana L. Planta 194, 395-405. doi: 10.1007/BF00197541
    • (1994) Planta , vol.194 , pp. 395-405
    • Fujie, M.1    Kuroiwa, H.2    Kawano, S.3    Mutoh, S.4    Kuroiwa, T.5
  • 35
    • 33847378477 scopus 로고    scopus 로고
    • Nuclease activity of the MutS homologue MutS2 from Thermus thermophilus is confined to the Smr domain
    • Fukui, K., Kosaka, H., Kuramitsu, S., and Masui, R. (2007). Nuclease activity of the MutS homologue MutS2 from Thermus thermophilus is confined to the Smr domain.Nucleic Acids Res. 35, 850-860. doi: 10.1093/nar/gkl735
    • (2007) Nucleic Acids Res. , vol.35 , pp. 850-860
    • Fukui, K.1    Kosaka, H.2    Kuramitsu, S.3    Masui, R.4
  • 37
    • 84899149416 scopus 로고    scopus 로고
    • Chloroplast DNA in mature and senescing leaves: A reappraisal
    • Golczyk, H., Greiner, S., Wanner, G., Weihe, A., Bock, R., Börner, T., et al. (2014). Chloroplast DNA in mature and senescing leaves: a reappraisal. Plant Cell 26, 847-854. doi: 10.1105/tpc.113.117465
    • (2014) Plant Cell , vol.26 , pp. 847-854
    • Golczyk, H.1    Greiner, S.2    Wanner, G.3    Weihe, A.4    Bock, R.5    Börner, T.6
  • 38
    • 67650564943 scopus 로고    scopus 로고
    • Evidence for base excision repair of oxidative DNA damage in chloroplasts of Arabidopsis thaliana
    • Gutman, B. L., and Niyogi, K. K. (2009). Evidence for base excision repair of oxidative DNA damage in chloroplasts of Arabidopsis thaliana. J. Biol. Chem. 284, 17006-17012. doi: 10.1074/jbc.M109.008342
    • (2009) J. Biol. Chem. , vol.284 , pp. 17006-17012
    • Gutman, B.L.1    Niyogi, K.K.2
  • 39
    • 0001417222 scopus 로고
    • DNA levels in dividing and developing plastids in expanding primary leaves of Avena sativa
    • Hashimoto, H., and Possingham, J. V. (1989). DNA levels in dividing and developing plastids in expanding primary leaves of Avena sativa. J. Exp. Bot. 40, 257-262. doi: 10.1093/jxb/40.2.257
    • (1989) J. Exp. Bot. , vol.40 , pp. 257-262
    • Hashimoto, H.1    Possingham, J.V.2
  • 40
    • 0027529403 scopus 로고
    • DNA replication in chloroplasts
    • Heinhorst, S., and Cannon, G. C. (1993). DNA replication in chloroplasts. J. Cell Sci.104, 1-9.
    • (1993) J. Cell Sci. , vol.104 , pp. 1-9
    • Heinhorst, S.1    Cannon, G.C.2
  • 41
    • 77950545784 scopus 로고    scopus 로고
    • The YlmG protein has a conserved function related to the distribution of nucleoids in chloroplasts and cyanobacteria
    • Kabeya, Y., Nakanishi, H., Suzuki, K., Ichikawa, T., Kondou, Y., Matsui, M., et al. (2010). The YlmG protein has a conserved function related to the distribution of nucleoids in chloroplasts and cyanobacteria. BMC Plant Biol. 10:57. doi: 10.1186/1471-2229-10-57
    • (2010) BMC Plant Biol. , vol.10 , pp. 57
    • Kabeya, Y.1    Nakanishi, H.2    Suzuki, K.3    Ichikawa, T.4    Kondou, Y.5    Matsui, M.6
  • 42
    • 84875694783 scopus 로고    scopus 로고
    • Chloroplast DNA replication is regulated by the redox state independently of chloroplast division in Chlamydomonas reinhardtii
    • Kabeya, Y., and Miyagishima, S. Y. (2013). Chloroplast DNA replication is regulated by the redox state independently of chloroplast division in Chlamydomonas reinhardtii. Plant Physiol. 161, 2102-2112. doi: 10.1104/pp.113.216291
    • (2013) Plant Physiol. , vol.161 , pp. 2102-2112
    • Kabeya, Y.1    Miyagishima, S.Y.2
  • 43
    • 18244400420 scopus 로고    scopus 로고
    • Structural and functional divergence of MutS2 from bacterial MutS1 and eukaryotic MSH4-MSH5 homologs
    • Kang, J., Huang, S., and Blaser, M. J. (2005). Structural and functional divergence of MutS2 from bacterial MutS1 and eukaryotic MSH4-MSH5 homologs. J. Bacteriol.187, 3528-3537. doi: 10.1128/JB.187.10.3528-3537.2005
    • (2005) J. Bacteriol. , vol.187 , pp. 3528-3537
    • Kang, J.1    Huang, S.2    Blaser, M.J.3
  • 44
    • 0027617142 scopus 로고
    • Direct evidence for selective modulation of psbA, rpoA, rbcL, and 16S RNA stability during barley chloroplast development
    • Kim, M., Christopher, D. A., and Mullet, J. E. (1993). Direct evidence for selective modulation of psbA, rpoA, rbcL, and 16S RNA stability during barley chloroplast development. Plant Mol. Biol. 22, 447-463. doi: 10.1007/BF00015975
    • (1993) Plant Mol. Biol. , vol.22 , pp. 447-463
    • Kim, M.1    Christopher, D.A.2    Mullet, J.E.3
  • 45
    • 0036529654 scopus 로고    scopus 로고
    • A novel DNA polymerase homologous to Escherichia coli DNA polymerase I from a higher plant, rice (Oryza sativa L.)
    • Kimura, S., Uchiyama, Y., Kasai, N., Namekawa, S., Saotome, A., Ueda, T., et al. (2002). A novel DNA polymerase homologous to Escherichia coli DNA polymerase I from a higher plant, rice (Oryza sativa L.). Nucleic Acids Res. 30, 1585-1592. doi: 10.1093/nar/30.7.1585
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1585-1592
    • Kimura, S.1    Uchiyama, Y.2    Kasai, N.3    Namekawa, S.4    Saotome, A.5    Ueda, T.6
  • 46
    • 84926483869 scopus 로고    scopus 로고
    • Chloroplast transcription, untangling the Gordian Knot
    • Kindgren, P., and Strand, A. (2015). Chloroplast transcription, untangling the Gordian Knot. New Phytol. 206, 889-891. doi: 10.1111/nph.13388
    • (2015) New Phytol. , vol.206 , pp. 889-891
    • Kindgren, P.1    Strand, A.2
  • 47
    • 0015366369 scopus 로고
    • Physicochemical characterization of mitochondrial DNA from pea leaves
    • Kolodner, R., and Tewari, K. K. (1972a). Physicochemical characterization of mitochondrial DNA from pea leaves. Proc. Natl. Acad. Sci. U.S.A. 69, 1830-1834.
    • (1972) Proc. Natl. Acad. Sci. U.S.A. , vol.69 , pp. 1830-1834
    • Kolodner, R.1    Tewari, K.K.2
  • 48
    • 0015501811 scopus 로고
    • Molecular size and conformation of chloroplast deoxyribonucleic acid from pea leaves
    • Kolodner, R., and Tewari, K. K. (1972b). Molecular size and conformation of chloroplast deoxyribonucleic acid from pea leaves. J. Biol. Chem. 247, 6355-6364.
    • (1972) J. Biol. Chem. , vol.247 , pp. 6355-6364
    • Kolodner, R.1    Tewari, K.K.2
  • 49
    • 0016802116 scopus 로고
    • Presence of displacement loops in the covalently closed circular chloroplast deoxyribonucleic acid from higher plants
    • Kolodner, R., and Tewari, K. K. (1975). Presence of displacement loops in the covalently closed circular chloroplast deoxyribonucleic acid from higher plants. J. Biol. Chem. 250, 8840-8847.
    • (1975) J. Biol. Chem. , vol.250 , pp. 8840-8847
    • Kolodner, R.1    Tewari, K.K.2
  • 50
    • 67649124134 scopus 로고    scopus 로고
    • A comparative approach to elucidate chloroplast genome replication
    • Krishnan, N. M., and Rao, B. J. (2009). A comparative approach to elucidate chloroplast genome replication. BMC Genomics 10:237. doi: 10.1186/1471-2164-10-237
    • (2009) BMC Genomics , vol.10 , pp. 237
    • Krishnan, N.M.1    Rao, B.J.2
  • 51
    • 84874293117 scopus 로고    scopus 로고
    • New insights into plastid nucleoid structure and functionality
    • Krupinska, K., Melonek, J., and Krause, K. (2013). New insights into plastid nucleoid structure and functionality. Planta 237, 653-664. doi: 10.1007/s00425-012-1817-5
    • (2013) Planta , vol.237 , pp. 653-664
    • Krupinska, K.1    Melonek, J.2    Krause, K.3
  • 52
    • 84922426330 scopus 로고    scopus 로고
    • Changes in DNA damage, molecular integrity, and copy number for plastid DNA and mitochondrial DNA during maize development
    • Kumar, R. A., Oldenburg, D. J., and Bendich, A. J. (2014). Changes in DNA damage, molecular integrity, and copy number for plastid DNA and mitochondrial DNA during maize development. J. Exp. Bot. 65, 6425-6439. doi: 10.1093/jxb/eru359
    • (2014) J. Exp. Bot. , vol.65 , pp. 6425-6439
    • Kumar, R.A.1    Oldenburg, D.J.2    Bendich, A.J.3
  • 53
    • 84939962480 scopus 로고    scopus 로고
    • Molecular integrity of chloroplast DNA and mitochondrial DNA in mesophyll and bundle sheath cells of maize
    • Kumar, R. A., Oldenburg, D. J., and Bendich, A. J. (2015). Molecular integrity of chloroplast DNA and mitochondrial DNA in mesophyll and bundle sheath cells of maize. Planta 241, 1221-1230. doi: 10.1007/s00425-015-2253-0
    • (2015) Planta , vol.241 , pp. 1221-1230
    • Kumar, R.A.1    Oldenburg, D.J.2    Bendich, A.J.3
  • 54
    • 0002063506 scopus 로고    scopus 로고
    • Chloroplast DNA replication: Mechanism, enzymes and replication origins
    • Kunnimalaiyaan, M., and Nielsen, B. L. (1997). Chloroplast DNA replication: mechanism, enzymes and replication origins. J. Plant Biochem. Biotechnol. 6, 1-7. doi: 10.1007/BF03263000
    • (1997) J. Plant Biochem. Biotechnol. , vol.6 , pp. 1-7
    • Kunnimalaiyaan, M.1    Nielsen, B.L.2
  • 55
    • 0026014556 scopus 로고
    • The replication, differentiation, and inheritance of plastids with emphasis on the concept of organelle nuclei
    • Kuroiwa, T. (1991). The replication, differentiation, and inheritance of plastids with emphasis on the concept of organelle nuclei. Internal. Rev. Cytol. 128, 1-62. doi: 10.1016/S0074-7696(08)60496-9
    • (1991) Internal. Rev. Cytol. , vol.128 , pp. 1-62
    • Kuroiwa, T.1
  • 56
    • 0026520490 scopus 로고
    • Studies on the behavior of mitochondrial DNA: Synthesis of mitochondrial DNA occurs actively in a specific region just above the quiescent center in the root meristem of Pelargonium zonale
    • Kuroiwa, T., Fujie, M., and Kuroiwa, H. (1992). Studies on the behavior of mitochondrial DNA: synthesis of mitochondrial DNA occurs actively in a specific region just above the quiescent center in the root meristem of Pelargonium zonale. J. Cell Sci. 101, 483-493.
    • (1992) J. Cell Sci. , vol.101 , pp. 483-493
    • Kuroiwa, T.1    Fujie, M.2    Kuroiwa, H.3
  • 57
    • 0000492502 scopus 로고
    • The chloroplast nucleus: Distribution, number, size, and shape, and a model for multiplication of the chloroplast genome during chloroplast development
    • Kuroiwa, T., Suzuki, T., Ogawa, K., and Kawano, S. (1981). The chloroplast nucleus: distribution, number, size, and shape, and a model for multiplication of the chloroplast genome during chloroplast development. Plant Cell Physiol. 22, 381-396.
    • (1981) Plant Cell Physiol. , vol.22 , pp. 381-396
    • Kuroiwa, T.1    Suzuki, T.2    Ogawa, K.3    Kawano, S.4
  • 58
    • 2142795318 scopus 로고
    • Changes in chloroplast DNA levels during development of pea (Pisum sativum)
    • Lamppa, G. K., and Bendich, A. J. (1979a). Changes in chloroplast DNA levels during development of pea (Pisum sativum). Plant Physiol. 64, 126-130.
    • (1979) Plant Physiol. , vol.64 , pp. 126-130
    • Lamppa, G.K.1    Bendich, A.J.2
  • 59
    • 1842338106 scopus 로고
    • Chloroplast DNA sequence homologies among vascular plants
    • Lamppa, G. K., and Bendich, A. J. (1979b). Chloroplast DNA sequence homologies among vascular plants. Plant Physiol. 63, 660-668.
    • (1979) Plant Physiol. , vol.63 , pp. 660-668
    • Lamppa, G.K.1    Bendich, A.J.2
  • 60
    • 0004754003 scopus 로고
    • Changes in mitochondrial DNA levels during development of pea (Pisum sativum L.)
    • Lamppa, G. K., and Bendich, A. J. (1984). Changes in mitochondrial DNA levels during development of pea (Pisum sativum L.). Planta 162, 463-468. doi: 10.1007/BF00393460
    • (1984) Planta , vol.162 , pp. 463-468
    • Lamppa, G.K.1    Bendich, A.J.2
  • 61
    • 79957851182 scopus 로고    scopus 로고
    • Identification of a soybean chloroplast DNA replication origin-binding protein
    • Lassen, M. G., Kochhar, S., and Nielsen, B. L. (2011). Identification of a soybean chloroplast DNA replication origin-binding protein. Plant Mol. Biol. 76, 463-471. doi: 10.1007/s11103-011-9736-6
    • (2011) Plant Mol. Biol. , vol.76 , pp. 463-471
    • Lassen, M.G.1    Kochhar, S.2    Nielsen, B.L.3
  • 63
    • 0035097645 scopus 로고    scopus 로고
    • Cytogenomic analyses reveal the structural plasticity of the chloroplast genome in higher plants
    • Lilly, J. W., Havey, M. J., Jackson, S. A., and Jiang, J. (2001). Cytogenomic analyses reveal the structural plasticity of the chloroplast genome in higher plants. Plant Cell13, 245-254. doi: 10.1105/tpc.13.2.245
    • (2001) Plant Cell , vol.13 , pp. 245-254
    • Lilly, J.W.1    Havey, M.J.2    Jackson, S.A.3    Jiang, J.4
  • 64
    • 32444433857 scopus 로고    scopus 로고
    • Constancy of organellar genome copy numbers during leaf development and senescence in higher plants
    • Li, W., Ruf, S., and Bock, R. (2006). Constancy of organellar genome copy numbers during leaf development and senescence in higher plants. Mol. Genet. Genomics. 275, 185-192. doi: 10.1007/s00438-005-0075-7
    • (2006) Mol. Genet. Genomics. , vol.275 , pp. 185-192
    • Li, W.1    Ruf, S.2    Bock, R.3
  • 65
    • 79959957516 scopus 로고    scopus 로고
    • Characterization of the structure and DNA complexity of mung bean mitochondrial nucleoids
    • Lo, Y. S., Hsiao, L. J., Cheng, N., Litvinchuk, A., and Dai, H. (2011). Characterization of the structure and DNA complexity of mung bean mitochondrial nucleoids. Mol. Cells 31, 217-224. doi: 10.1007/s10059-011-0036-4
    • (2011) Mol. Cells , vol.31 , pp. 217-224
    • Lo, Y.S.1    Hsiao, L.J.2    Cheng, N.3    Litvinchuk, A.4    Dai, H.5
  • 66
    • 84855286345 scopus 로고    scopus 로고
    • Nucleoid-enriched proteomes in developing plastids and chloroplasts from maize leaves: A new conceptual framework for nucleoid functions
    • Majeran, W., Friso, G., Asakura, Y., Qu, X., Huang, M., Ponnala, L., et al. (2012). Nucleoid-enriched proteomes in developing plastids and chloroplasts from maize leaves: a new conceptual framework for nucleoid functions. Plant Physiol. 158, 156-189. doi: 10.1104/pp.111.188474
    • (2012) Plant Physiol. , vol.158 , pp. 156-189
    • Majeran, W.1    Friso, G.2    Asakura, Y.3    Qu, X.4    Huang, M.5    Ponnala, L.6
  • 67
    • 0015520580 scopus 로고
    • Synthesis and turnover of Euglena gracilisnuclear and chloroplast deoxyribonucleic acid
    • Manning, J. E., and Richards, O. C. (1972). Synthesis and turnover of Euglena gracilisnuclear and chloroplast deoxyribonucleic acid. Biochemistry 11, 2036-2043. doi: 10.1021/bi00761a007
    • (1972) Biochemistry , vol.11 , pp. 2036-2043
    • Manning, J.E.1    Richards, O.C.2
  • 69
    • 77954693072 scopus 로고    scopus 로고
    • Recombination and the maintenance of plant organelle genome stability
    • Marechal, A., and Brisson, N. (2010). Recombination and the maintenance of plant organelle genome stability. New Phytol. 186, 299-317. doi: 10.1111/j.1469-8137.2010.03195.x
    • (2010) New Phytol. , vol.186 , pp. 299-317
    • Marechal, A.1    Brisson, N.2
  • 70
    • 79955639890 scopus 로고    scopus 로고
    • Organization and regulation of mitochondrial respiration in plants
    • Millar, A. H., Whelan, J., Soole, K. L., and Day, D. A. (2011). Organization and regulation of mitochondrial respiration in plants. Annu. Rev. Plant Biol. 62, 79-104. doi: 10.1146/annurev-arplant-042110-103857
    • (2011) Annu. Rev. Plant Biol. , vol.62 , pp. 79-104
    • Millar, A.H.1    Whelan, J.2    Soole, K.L.3    Day, D.A.4
  • 71
    • 0002022869 scopus 로고
    • Quantitative fluorescence microscopy on dynamic changes of plastid nucleoids during wheat development
    • Miyamura, S., Nagata, T., and Kuroiwa, T. (1986). Quantitative fluorescence microscopy on dynamic changes of plastid nucleoids during wheat development.Protoplasma 133, 66-72. doi: 10.1007/BF01293188
    • (1986) Protoplasma , vol.133 , pp. 66-72
    • Miyamura, S.1    Nagata, T.2    Kuroiwa, T.3
  • 72
    • 84908164606 scopus 로고    scopus 로고
    • Enzymes involved in organellar DNA replication in photosynthetic eukaryotes
    • Moriyama, T., and Sato, N. (2014). Enzymes involved in organellar DNA replication in photosynthetic eukaryotes. Front. Plant Sci. 5:480. doi: 10.3389/fpls.2014.00480
    • (2014) Front. Plant Sci. , vol.5 , pp. 480
    • Moriyama, T.1    Sato, N.2
  • 74
    • 84922575928 scopus 로고    scopus 로고
    • DNA-pairing and annealing processes in homologous recombination and homology-directed repair
    • Morrical, S. W. (2015). DNA-pairing and annealing processes in homologous recombination and homology-directed repair. Cold Spring Harb. Perspect. Biol. 7, a016444. doi: 10.1101/cshperspect.a016444
    • (2015) Cold Spring Harb. Perspect. Biol. , vol.7
    • Morrical, S.W.1
  • 75
    • 0024301132 scopus 로고
    • Patterns of leaf development in C4 plants
    • Nelson, T., and Langdale, J. A. (1989). Patterns of leaf development in C4 plants. Plant Cell 1, 3-13. doi: 10.1105/tpc.1.1.3
    • (1989) Plant Cell , vol.1 , pp. 3-13
    • Nelson, T.1    Langdale, J.A.2
  • 76
    • 0000907447 scopus 로고
    • Studies on plastid-nuclei (nucleoids) in Nicotiana tabacum L. III. Disassembly and reassembly of proplastid-nuclei isolated from cultured cells
    • Nemoto, Y., Nagata, T., and Kuroiwa, T. (1990). Studies on plastid-nuclei (nucleoids) in Nicotiana tabacum L. III. Disassembly and reassembly of proplastid-nuclei isolated from cultured cells. Plant Cell Physiol. 31, 767-776.
    • (1990) Plant Cell Physiol. , vol.31 , pp. 767-776
    • Nemoto, Y.1    Nagata, T.2    Kuroiwa, T.3
  • 77
    • 0001325378 scopus 로고
    • Protein-DNA interaction within one cloned chloroplast DNA replication origin of Chlamydomonas
    • Nie, Z. Q., Chang, D. Y., and Wu, M. (1987). Protein-DNA interaction within one cloned chloroplast DNA replication origin of Chlamydomonas. Mol. Gen. Genet. 209, 265-269. doi: 10.1007/BF00329652
    • (1987) Mol. Gen. Genet. , vol.209 , pp. 265-269
    • Nie, Z.Q.1    Chang, D.Y.2    Wu, M.3
  • 78
    • 33644555823 scopus 로고    scopus 로고
    • On the origin of telomeres: A glimpse at the pre-telomerase world
    • Nosek, J., Kosa, P., and Tomaska, L. (2006). On the origin of telomeres: a glimpse at the pre-telomerase world. Bioessays 28, 182-190. doi: 10.1002/bies.20355
    • (2006) Bioessays , vol.28 , pp. 182-190
    • Nosek, J.1    Kosa, P.2    Tomaska, L.3
  • 79
    • 0001621288 scopus 로고    scopus 로고
    • Size and structure of replicating mitochondrial DNA in cultured tobacco cells
    • Oldenburg, D. J., and Bendich, A. J. (1996). Size and structure of replicating mitochondrial DNA in cultured tobacco cells. Plant Cell 8, 447-461. doi: 10.1105/tpc.8.3.447
    • (1996) Plant Cell , vol.8 , pp. 447-461
    • Oldenburg, D.J.1    Bendich, A.J.2
  • 80
    • 0032489496 scopus 로고    scopus 로고
    • The structure of mitochondrial DNA from the liverwort, Marchantia polymorpha
    • Oldenburg, D. J., and Bendich, A. J. (1998a). The structure of mitochondrial DNA from the liverwort, Marchantia polymorpha. J. Mol. Biol. 276, 745-758. doi: 10.1006/jmbi.1997.1581
    • (1998) J. Mol. Biol. , vol.276 , pp. 745-758
    • Oldenburg, D.J.1    Bendich, A.J.2
  • 81
    • 0031934186 scopus 로고    scopus 로고
    • Fluorescence microscopy of DNA-protein structures from osmotically lysed mitochondria of yeast and tobacco
    • Oldenburg, D. J., and Bendich, A. J. (1998b). Fluorescence microscopy of DNA-protein structures from osmotically lysed mitochondria of yeast and tobacco.Protoplasma 201, 53-63. doi: 10.1007/BF01280711
    • (1998) Protoplasma , vol.201 , pp. 53-63
    • Oldenburg, D.J.1    Bendich, A.J.2
  • 82
    • 0347123538 scopus 로고    scopus 로고
    • Most chloroplast DNA of maize seedlings in linear molecules with defined ends and branched forms
    • Oldenburg, D. J., and Bendich, A. J. (2004a). Most chloroplast DNA of maize seedlings in linear molecules with defined ends and branched forms. J. Mol. Biol. 335, 953-970. doi: 10.1016/j.jmb.2003.11.020
    • (2004) J. Mol. Biol. , vol.335 , pp. 953-970
    • Oldenburg, D.J.1    Bendich, A.J.2
  • 83
    • 9344270525 scopus 로고    scopus 로고
    • Changes in the structure of DNA molecules and the amount of DNA per plastid during chloroplast development in maize
    • Oldenburg, D. J., and Bendich, A. J. (2004b). Changes in the structure of DNA molecules and the amount of DNA per plastid during chloroplast development in maize. J. Mol. Biol. 344, 1311-1330. doi: 10.1016/j.jmb.2004.10.001
    • (2004) J. Mol. Biol. , vol.344 , pp. 1311-1330
    • Oldenburg, D.J.1    Bendich, A.J.2
  • 84
    • 84873097698 scopus 로고    scopus 로고
    • The amount and integrity of mtDNA in maize decline with development
    • Oldenburg, D. J., Kumar, R. A., and Bendich, A. J. (2013). The amount and integrity of mtDNA in maize decline with development. Planta 237, 603-617. doi: 10.1007/s00425-012-1802-z
    • (2013) Planta , vol.237 , pp. 603-617
    • Oldenburg, D.J.1    Kumar, R.A.2    Bendich, A.J.3
  • 85
    • 84899131744 scopus 로고    scopus 로고
    • On the fate of plastid DNA molecules during leaf development: Response to the Golczyk et al. Commentary
    • Oldenburg, D. J., Rowan, B. A., Kumar, R. A., and Bendich, A. J. (2014). On the fate of plastid DNA molecules during leaf development: response to the Golczyk et al. Commentary. Plant Cell 26, 855-861. doi: 10.1105/tpc.113.121772
    • (2014) Plant Cell , vol.26 , pp. 855-861
    • Oldenburg, D.J.1    Rowan, B.A.2    Kumar, R.A.3    Bendich, A.J.4
  • 86
    • 33750999367 scopus 로고    scopus 로고
    • Loss or retention of chloroplast DNA in maize seedlings is affected by both light and genotype
    • Oldenburg, D. J., Rowan, B. A., Zhao, L., Walcher, C. L., Schleh, M., and Bendich, A. J. (2006). Loss or retention of chloroplast DNA in maize seedlings is affected by both light and genotype. Planta 225, 41-55. doi: 10.1007/s00425-006-0329-6
    • (2006) Planta , vol.225 , pp. 41-55
    • Oldenburg, D.J.1    Rowan, B.A.2    Zhao, L.3    Walcher, C.L.4    Schleh, M.5    Bendich, A.J.6
  • 87
    • 0019851746 scopus 로고
    • Rearrangements in the chloroplast genomes of mung bean and pea
    • Palmer, J. D., and Thompson, W. F. (1981). Rearrangements in the chloroplast genomes of mung bean and pea. Proc. Natl. Acad. Sci. U.S.A. 78, 5533-5537. doi: 10.1073/pnas.78.9.5533
    • (1981) Proc. Natl. Acad. Sci. U.S.A. , vol.78 , pp. 5533-5537
    • Palmer, J.D.1    Thompson, W.F.2
  • 88
    • 79955988819 scopus 로고    scopus 로고
    • Divergent roles for the two PolI-like organelle DNA polymerases of Arabidopsis
    • Parent, J. S., Lepage, E., and Brisson, N. (2011). Divergent roles for the two PolI-like organelle DNA polymerases of Arabidopsis. Plant Physiol. 156, 254-262. doi: 10.1104/pp.111.173849
    • (2011) Plant Physiol. , vol.156 , pp. 254-262
    • Parent, J.S.1    Lepage, E.2    Brisson, N.3
  • 89
    • 11344253285 scopus 로고    scopus 로고
    • Suppression of homologous and homeologous recombination by the bacterial MutS2 protein
    • Pinto, A. V., Mathieu, A., Marsin, S., Veaute, X., Ielpi, L., Labigne, A., et al. (2005). Suppression of homologous and homeologous recombination by the bacterial MutS2 protein. Mol. Cell. 17, 113-120. doi: 10.1016/j.molcel.2004.11.035
    • (2005) Mol. Cell. , vol.17 , pp. 113-120
    • Pinto, A.V.1    Mathieu, A.2    Marsin, S.3    Veaute, X.4    Ielpi, L.5    Labigne, A.6
  • 90
    • 84908191788 scopus 로고    scopus 로고
    • Dynamic composition, shaping and organization of plastid nucleoids
    • Powikrowska, M., Oetke, S., Jensen, P. E., and Krupinska, K. (2014). Dynamic composition, shaping and organization of plastid nucleoids. Front. Plant Sci. 5:424. doi: 10.3389/fpls.2014.00424
    • (2014) Front. Plant Sci. , vol.5 , pp. 424
    • Powikrowska, M.1    Oetke, S.2    Jensen, P.E.3    Krupinska, K.4
  • 91
    • 78650118924 scopus 로고    scopus 로고
    • Fewer genes than organelles: Extremely low and variable gene copy numbers in mitochondria of somatic plant cells
    • Preuten, T., Cincu, E., Fuchs, J., Zoschke, R., Liere, K., and Börner, T. (2010). Fewer genes than organelles: extremely low and variable gene copy numbers in mitochondria of somatic plant cells. Plant J. 64, 948-959. doi: 10.1111/j.1365-313X.2010.04389.x
    • (2010) Plant J. , vol.64 , pp. 948-959
    • Preuten, T.1    Cincu, E.2    Fuchs, J.3    Zoschke, R.4    Liere, K.5    Börner, T.6
  • 92
    • 52649136147 scopus 로고    scopus 로고
    • A member of the Whirly family is a multifunctional RNA- and DNA-binding protein that is essential for chloroplast biogenesis
    • Prikryl, J., Watkins, K. P., Friso, G., van Wijk, K. J., and Barkan, A. (2008). A member of the Whirly family is a multifunctional RNA- and DNA-binding protein that is essential for chloroplast biogenesis. Nucleic Acids Res. 36, 5152-5165. doi: 10.1093/nar/gkn492
    • (2008) Nucleic Acids Res. , vol.36 , pp. 5152-5165
    • Prikryl, J.1    Watkins, K.P.2    Friso, G.3    van Wijk, K.J.4    Barkan, A.5
  • 93
    • 84929465548 scopus 로고    scopus 로고
    • Organization and dynamics of the nonhomologous end-joining machinery during DNA double-strand break repair
    • Reid, D. A., Keegan, S., Leo-Macias, A., Watanabe, G., Strande, N. T., Chang, H. H., et al. (2015). Organization and dynamics of the nonhomologous end-joining machinery during DNA double-strand break repair. Proc. Natl. Acad. Sci. U.S.A. 112, E2575-E2584. doi: 10.1073/pnas.1420115112
    • (2015) Proc. Natl. Acad. Sci. U.S.A. , vol.112 , pp. E2575-E2584
    • Reid, D.A.1    Keegan, S.2    Leo-Macias, A.3    Watanabe, G.4    Strande, N.T.5    Chang, H.H.6
  • 94
    • 0015988511 scopus 로고
    • Synthesis and turnover of Euglena gracilismitochondrial DNA
    • Richards, O. C., and Ryan, R. S. (1974). Synthesis and turnover of Euglena gracilismitochondrial DNA. J. Mol. Biol. 82, 57-75. doi: 10.1016/0022-2836(74)90574-9
    • (1974) J. Mol. Biol. , vol.82 , pp. 57-75
    • Richards, O.C.1    Ryan, R.S.2
  • 95
    • 70349106898 scopus 로고    scopus 로고
    • The loss of DNA from chloroplasts as leaves mature: Fact or artefact? J
    • Rowan, B. A., and Bendich, A. J. (2009). The loss of DNA from chloroplasts as leaves mature: fact or artefact? J. Exp. Bot. 60, 3005-3010. doi: 10.1093/jxb/erp158
    • (2009) Exp. Bot. , vol.60 , pp. 3005-3010
    • Rowan, B.A.1    Bendich, A.J.2
  • 96
    • 3142774899 scopus 로고    scopus 로고
    • The demise of chloroplast DNA in Arabidopsis
    • Rowan, B. A., Oldenburg, D. J., and Bendich, A. J. (2004). The demise of chloroplast DNA in Arabidopsis. Curr. Genet. 46, 176-181. doi: 10.1007/s00294-004-0515-7
    • (2004) Curr. Genet. , vol.46 , pp. 176-181
    • Rowan, B.A.1    Oldenburg, D.J.2    Bendich, A.J.3
  • 97
    • 60349097605 scopus 로고    scopus 로고
    • A multiple-method approach reveals a declining amount of chloroplast DNA during development inArabidopsis
    • Rowan, B. A., Oldenburg, D. J., and Bendich, A. J. (2009). A multiple-method approach reveals a declining amount of chloroplast DNA during development inArabidopsis. BMC Plant Biol. 9:3. doi: 10.1186/1471-2229-9-3
    • (2009) BMC Plant Biol. , vol.9 , pp. 3
    • Rowan, B.A.1    Oldenburg, D.J.2    Bendich, A.J.3
  • 98
    • 77954724160 scopus 로고    scopus 로고
    • RecA maintains the integrity of chloroplast DNA molecules in Arabidopsis
    • Rowan, B. A., Oldenburg, D. J., and Bendich, A. J. (2010). RecA maintains the integrity of chloroplast DNA molecules in Arabidopsis. J. Exp. Bot. 61, 2575-2588. doi: 10.1093/jxb/erq088
    • (2010) J. Exp. Bot. , vol.61 , pp. 2575-2588
    • Rowan, B.A.1    Oldenburg, D.J.2    Bendich, A.J.3
  • 99
    • 33750444943 scopus 로고    scopus 로고
    • Linear molecules of tobacco ptDNA end at known replication origins and additional loci
    • Scharff, L. B., and Koop, H. U. (2006). Linear molecules of tobacco ptDNA end at known replication origins and additional loci. Plant Mol. Biol. 62, 611-621. doi: 10.1007/s11103-006-9042-x
    • (2006) Plant Mol. Biol. , vol.62 , pp. 611-621
    • Scharff, L.B.1    Koop, H.U.2
  • 100
    • 34249784806 scopus 로고    scopus 로고
    • Targeted inactivation of the tobacco plastome origins of replication A and B
    • Scharff, L. B., and Koop, H. U. (2007). Targeted inactivation of the tobacco plastome origins of replication A and B. Plant J. 50, 782-794. doi: 10.1111/j.1365-313X.2007.03087.x
    • (2007) Plant J. , vol.50 , pp. 782-794
    • Scharff, L.B.1    Koop, H.U.2
  • 101
    • 33744487886 scopus 로고    scopus 로고
    • Changes in chloroplast DNA during development in tobacco, Medicago truncatula, pea, and maize
    • Shaver, J. M., Oldenburg, D. J., and Bendich, A. J. (2006). Changes in chloroplast DNA during development in tobacco, Medicago truncatula, pea, and maize. Planta 224, 72-82. doi: 10.1007/s00425-005-0195-7
    • (2006) Planta , vol.224 , pp. 72-82
    • Shaver, J.M.1    Oldenburg, D.J.2    Bendich, A.J.3
  • 102
    • 48949107736 scopus 로고    scopus 로고
    • The structure of chloroplast DNA molecules and the effects of light on the amount of chloroplast DNA during development in Medicago truncatula
    • Shaver, J. M., Oldenburg, D. J., and Bendich, A. J. (2008). The structure of chloroplast DNA molecules and the effects of light on the amount of chloroplast DNA during development in Medicago truncatula. Plant Physiol. 146, 1064-1074. doi: 10.1104/pp.107.112946
    • (2008) Plant Physiol. , vol.146 , pp. 1064-1074
    • Shaver, J.M.1    Oldenburg, D.J.2    Bendich, A.J.3
  • 104
    • 0027265542 scopus 로고
    • Degradation of individual chromosomes in recA mutants of Escherichia coli
    • Skarstad, K., and Boye, E. (1993). Degradation of individual chromosomes in recA mutants of Escherichia coli. J. Bacteriol. 175, 5505-5509.
    • (1993) J. Bacteriol. , vol.175 , pp. 5505-5509
    • Skarstad, K.1    Boye, E.2
  • 105
    • 84891458417 scopus 로고    scopus 로고
    • Gene conversion shapes linear mitochondrial genome architecture
    • Smith, D. R., and Keeling, P. J. (2013). Gene conversion shapes linear mitochondrial genome architecture. Genome Biol. Evol. 5, 905-912. doi: 10.1093/gbe/evt059
    • (2013) Genome Biol. Evol. , vol.5 , pp. 905-912
    • Smith, D.R.1    Keeling, P.J.2
  • 106
    • 2642512446 scopus 로고    scopus 로고
    • Genetics and genomics of chloroplast biogenesis: Maize as a model system
    • Stern, D. B., Hanson, M. R., and Barkan, A. (2004). Genetics and genomics of chloroplast biogenesis: maize as a model system. Trends Plant Sci. 9, 293-301. doi: 10.1016/j.tplants.2004.04.001
    • (2004) Trends Plant Sci. , vol.9 , pp. 293-301
    • Stern, D.B.1    Hanson, M.R.2    Barkan, A.3
  • 107
    • 0021759592 scopus 로고
    • Recombination sequences in plant mitochondrial genomes: Diversity and homologies to known mitochondrial genes
    • Stern, D. B., and Palmer, J. D. (1984). Recombination sequences in plant mitochondrial genomes: diversity and homologies to known mitochondrial genes.Nucleic Acids Res. 12, 6141-6157. doi: 10.1093/nar/12.15.6141
    • (1984) Nucleic Acids Res. , vol.12 , pp. 6141-6157
    • Stern, D.B.1    Palmer, J.D.2
  • 108
    • 79955517846 scopus 로고    scopus 로고
    • Evolution of grasses and grassland ecosystems
    • Strömberg, C. A. E. (2011). Evolution of grasses and grassland ecosystems. Annu. Rev. Earth Planet. Sci. 39, 517-544. doi: 10.1146/annurev-earth-040809-152402
    • (2011) Annu. Rev. Earth Planet. Sci. , vol.39 , pp. 517-544
    • Strömberg, C.A.E.1
  • 109
    • 15044341867 scopus 로고    scopus 로고
    • The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: Comparative analysis of mitochondrial genomes in higher plants
    • Sugiyama, Y., Watase, Y., Nagase, M., Makita, N., Yagura, S., Hirai, A., et al. (2005). The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants. Mol. Genet. Genomics. 272, 603-615. doi: 10.1007/s00438-004-1075-8
    • (2005) Mol. Genet. Genomics. , vol.272 , pp. 603-615
    • Sugiyama, Y.1    Watase, Y.2    Nagase, M.3    Makita, N.4    Yagura, S.5    Hirai, A.6
  • 110
    • 0029159237 scopus 로고
    • Localization of organelle DNA synthesis within the root apical meristem of rice
    • Suzuki, T., Sasaki, N., Sakai, A., Kawano, S., and Kuroiwa, T. (1995). Localization of organelle DNA synthesis within the root apical meristem of rice. J. Exp. Bot. 46, 19-25. doi: 10.1093/jxb/46.1.19
    • (1995) J. Exp. Bot. , vol.46 , pp. 19-25
    • Suzuki, T.1    Sasaki, N.2    Sakai, A.3    Kawano, S.4    Kuroiwa, T.5
  • 111
    • 0025201789 scopus 로고
    • Division and differentiation during normal and liguleless-1 maize leaf development
    • Sylvester, A. W., Cande, W. Z., and Freeling, M. (1990). Division and differentiation during normal and liguleless-1 maize leaf development. Development 110, 985-1000.
    • (1990) Development , vol.110 , pp. 985-1000
    • Sylvester, A.W.1    Cande, W.Z.2    Freeling, M.3
  • 112
    • 0033768830 scopus 로고    scopus 로고
    • Quantitative analysis of cell division in leaves: Methods, developmental patterns and effects of environmental conditions
    • Tardieu, F., and Granier, C. (2000). Quantitative analysis of cell division in leaves: methods, developmental patterns and effects of environmental conditions. Plant Mol. Biol. 43, 555-567. doi: 10.1023/A:1006438321386
    • (2000) Plant Mol. Biol. , vol.43 , pp. 555-567
    • Tardieu, F.1    Granier, C.2
  • 113
    • 0035808352 scopus 로고    scopus 로고
    • Electron microscopic analysis supports a dual role for the mitochondrial telomere-binding protein of Candida parapsilosis
    • Tomaska, L., Makhov, A. M., Nosek, J., Kucejova, B., and Griffith, J. D. (2001). Electron microscopic analysis supports a dual role for the mitochondrial telomere-binding protein of Candida parapsilosis. J. Mol. Biol. 305, 61-69. doi: 10.1006/jmbi.2000.4254
    • (2001) J. Mol. Biol. , vol.305 , pp. 61-69
    • Tomaska, L.1    Makhov, A.M.2    Nosek, J.3    Kucejova, B.4    Griffith, J.D.5
  • 114
    • 84868319446 scopus 로고    scopus 로고
    • Effects of reduced chloroplast gene copy number on chloroplast gene expression in maize
    • Udy, D. B., Belcher, S., Williams-Carrier, R., Gualberto, J. M., and Barkan, A. (2012). Effects of reduced chloroplast gene copy number on chloroplast gene expression in maize. Plant Physiol. 160, 1420-1431. doi: 10.1104/pp.112.204198
    • (2012) Plant Physiol. , vol.160 , pp. 1420-1431
    • Udy, D.B.1    Belcher, S.2    Williams-Carrier, R.3    Gualberto, J.M.4    Barkan, A.5
  • 115
    • 0031021278 scopus 로고    scopus 로고
    • The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides
    • Unseld, M., Marienfeld, J. R., Brandt, P., and Brennicke, A. (1997). The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides. Nat. Genet.15, 57-61. doi: 10.1038/ng0197-57
    • (1997) Nat. Genet. , vol.15 , pp. 57-61
    • Unseld, M.1    Marienfeld, J.R.2    Brandt, P.3    Brennicke, A.4
  • 116
    • 0019441235 scopus 로고
    • The mitochondrial genome is large and variable in a family of plants (Cucurbitaceae)
    • Ward, B. L., Anderson, R. S., and Bendich, A. J. (1981). The mitochondrial genome is large and variable in a family of plants (Cucurbitaceae). Cell 25, 793-803. doi: 10.1016/0092-8674(81)90187-2
    • (1981) Cell , vol.25 , pp. 793-803
    • Ward, B.L.1    Anderson, R.S.2    Bendich, A.J.3
  • 117
    • 84907542557 scopus 로고    scopus 로고
    • Recombination promoted by DNA viruses: Phage lambda to herpes simplex virus
    • Weller, S. K., and Sawitzke, J. A. (2014). Recombination promoted by DNA viruses: phage lambda to herpes simplex virus. Annu. Rev. Microbiol. 68, 237-258. doi: 10.1146/annurev-micro-091313-103424
    • (2014) Annu. Rev. Microbiol. , vol.68 , pp. 237-258
    • Weller, S.K.1    Sawitzke, J.A.2
  • 118
    • 0036272465 scopus 로고    scopus 로고
    • The curious history of yeast mitochondrial DNA
    • Williamson, D. (2002). The curious history of yeast mitochondrial DNA. Nat. Rev. Genet. 3, 475-481. doi: 10.1038/nrg814
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 475-481
    • Williamson, D.1
  • 119
    • 0031032817 scopus 로고    scopus 로고
    • Mitochondrial DNA damage is more extensive and persists longer than nuclear DNA damage in human cells following oxidative stress
    • Yakes, F. M., and Van Houten, B. (1997). Mitochondrial DNA damage is more extensive and persists longer than nuclear DNA damage in human cells following oxidative stress. Proc. Natl. Acad. Sci. U.S.A. 94, 514-519. doi: 10.1073/pnas.94.2.514
    • (1997) Proc. Natl. Acad. Sci. U.S.A. , vol.94 , pp. 514-519
    • Yakes, F.M.1    Van Houten, B.2
  • 120
    • 84929659040 scopus 로고    scopus 로고
    • Organelle DNA rearrangement mapping reveals U-turn-like inversions as a major source of genomic instability in Arabidopsis and humans
    • Zampini, E., Lepage, E., Tremblay-Belzile, S., Truche, S., and Brisson, N. (2015). Organelle DNA rearrangement mapping reveals U-turn-like inversions as a major source of genomic instability in Arabidopsis and humans. Genome Res. 25, 645-654. doi: 10.1101/gr.188573.114
    • (2015) Genome Res. , vol.25 , pp. 645-654
    • Zampini, E.1    Lepage, E.2    Tremblay-Belzile, S.3    Truche, S.4    Brisson, N.5
  • 121
    • 79957437619 scopus 로고    scopus 로고
    • Independent effects of leaf growth and light on the development of the plastid and its DNA content in Zea species
    • Zheng, Q., Oldenburg, D. J., and Bendich, A. J. (2011). Independent effects of leaf growth and light on the development of the plastid and its DNA content in Zea species.J. Exp. Bot. 62, 2715-2730. doi: 10.1093/jxb/erq441
    • (2011) J. Exp. Bot. , vol.62 , pp. 2715-2730
    • Zheng, Q.1    Oldenburg, D.J.2    Bendich, A.J.3
  • 122
    • 34248398376 scopus 로고    scopus 로고
    • From seedling to mature plant:Arabidopsis plastidial genome copy number, RNA accumulation and transcription are differentially regulated during leaf development
    • Zoschke, R., Liere, K., and Börner, T. (2007). From seedling to mature plant:Arabidopsis plastidial genome copy number, RNA accumulation and transcription are differentially regulated during leaf development. Plant J. 50, 710-722. doi: 10.1111/j.1365-313X.2007.03084.x
    • (2007) Plant J. , vol.50 , pp. 710-722
    • Zoschke, R.1    Liere, K.2    Börner, T.3


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