메뉴 건너뛰기




Volumn 10, Issue 11, 2015, Pages 1770-1782

The potential of random forest and neural networks for biomass and recombinant protein modeling in Escherichia coli fed-batch fermentations

Author keywords

Artificial neural networks; Process analytical technology; Quality by design; Random forest; Recombinant protein production

Indexed keywords

ARTIFICIAL INTELLIGENCE; CULTIVATION; DECISION TREES; ESCHERICHIA COLI; FERMENTATION; FLUORESCENCE SPECTROSCOPY; KNOWLEDGE BASED SYSTEMS; LEARNING SYSTEMS; NEURAL NETWORKS; PROCESS CONTROL; PROCESS MONITORING; PRODUCT DESIGN; PROTEINS; QUALITY ASSURANCE; QUALITY CONTROL;

EID: 84947045799     PISSN: 18606768     EISSN: 18607314     Source Type: Journal    
DOI: 10.1002/biot.201400790     Document Type: Article
Times cited : (37)

References (32)
  • 1
    • 67650594550 scopus 로고    scopus 로고
    • International Conference on Harmonisation; guidance on Q8(R1) Pharmaceutical Development; addition of annex; availability. Notice.
    • Food and Drug Administration, H. H. S.
    • Food and Drug Administration, H. H. S., International Conference on Harmonisation; guidance on Q8(R1) Pharmaceutical Development; addition of annex; availability. Notice. Fed. Regist. 2009, 74, 27325-27326.
    • (2009) Fed. Regist. , vol.74 , pp. 27325-27326
  • 2
    • 33745601149 scopus 로고    scopus 로고
    • International Conference on Harmonisation; guidance on Q9 Quality Risk Management; availability. Notice.
    • Food and Drug Administration, H. H. S.
    • Food and Drug Administration, H. H. S., International Conference on Harmonisation; guidance on Q9 Quality Risk Management; availability. Notice. Fed. Regist. 2006, 71, 32105-32106.
    • (2006) Fed. Regist. , vol.71 , pp. 32105-32106
  • 3
    • 66849131572 scopus 로고    scopus 로고
    • International Conference on Harmonisation; guidance on Q10 Pharmaceutical Quality System; availability. Notice.
    • Food and Drug Administration, H. H. S., International Conference on Harmonisation; guidance on Q10 Pharmaceutical Quality System; availability. Notice. Fed. Regist. 2009, 74, 15990-15991.
    • (2009) Fed. Regist. , vol.74 , pp. 15990-15991
  • 4
    • 14844291495 scopus 로고    scopus 로고
    • Guidance for Industry: PAT - A Framework for Innovative Pharmaceutical Development, Manufacturing, and Quality Assurance
    • [Oct 13, 2014].
    • Food and Drug Administration, H. H. S., Guidance for Industry: PAT - A Framework for Innovative Pharmaceutical Development, Manufacturing, and Quality Assurance 2004. http://www.fda.gov/downloads/Drugs/Guidances/ucm070305.pdf [Oct 13, 2014].
    • (2004)
  • 5
    • 68749083515 scopus 로고    scopus 로고
    • Roadmap for implementation of quality by design (QbD) for biotechnology products.
    • Rathore, A. S., Roadmap for implementation of quality by design (QbD) for biotechnology products. Trends Biotechnol. 2009, 27, 546-553.
    • (2009) Trends Biotechnol. , vol.27 , pp. 546-553
    • Rathore, A.S.1
  • 6
    • 43349088601 scopus 로고    scopus 로고
    • Pharmaceutical Quality by design: Product and process development, understanding, and control.
    • Yu, L., Pharmaceutical Quality by design: Product and process development, understanding, and control. Pharm. Res. 2008, 25, 781-791.
    • (2008) Pharm. Res. , vol.25 , pp. 781-791
    • Yu, L.1
  • 7
    • 84882974298 scopus 로고    scopus 로고
    • An advanced monitoring platform for rational design of recombinant processes
    • Mandenius, C.-F., Titchener-Hooker, H. J. (Eds.), Measurement, Monitoring, Modelling and Control of Bioprocesses, Springer, Berlin Heidelberg
    • Striedner, G., Bayer, K., An advanced monitoring platform for rational design of recombinant processes, in: Mandenius, C.-F., Titchener-Hooker, H. J. (Eds.), Measurement, Monitoring, Modelling and Control of Bioprocesses, Springer, Berlin Heidelberg 2013, pp. 65-84.
    • (2013) , pp. 65-84
    • Striedner, G.1    Bayer, K.2
  • 8
    • 26444526644 scopus 로고    scopus 로고
    • Sensor combination and chemometric modelling for improved process monitoring in recombinant E. coli fed-batch cultivations.
    • Clementschitsch, F., Kern, J., Pötschacher, F., Bayer, K., Sensor combination and chemometric modelling for improved process monitoring in recombinant E. coli fed-batch cultivations. J. Biotechnol. 2005, 120, 183-196.
    • (2005) J. Biotechnol. , vol.120 , pp. 183-196
    • Clementschitsch, F.1    Kern, J.2    Pötschacher, F.3    Bayer, K.4
  • 9
    • 80052610035 scopus 로고    scopus 로고
    • In situ sensor techniques in modern bioprocess monitoring.
    • Beutel, S., Henkel, S., In situ sensor techniques in modern bioprocess monitoring. Appl. Microbiol. Biotechnol. 2011, 91, 1493-1505.
    • (2011) Appl. Microbiol. Biotechnol. , vol.91 , pp. 1493-1505
    • Beutel, S.1    Henkel, S.2
  • 10
    • 33645217831 scopus 로고    scopus 로고
    • Real-time bioprocess monitoring: Part I: In situ sensors.
    • Vojinovic, V., Cabral, J., Fonseca, L., Real-time bioprocess monitoring: Part I: In situ sensors. Sens. Actuators, B 2006, 114, 1083-1091.
    • (2006) Sens. Actuators, B , vol.114 , pp. 1083-1091
    • Vojinovic, V.1    Cabral, J.2    Fonseca, L.3
  • 12
    • 84868119104 scopus 로고    scopus 로고
    • Implementation of proton transfer reaction-mass spectrometry (PTR-MS) for advanced bioprocess monitoring.
    • Luchner, M., Gutmann, R., Bayer, K., Dunkl, J. et al., Implementation of proton transfer reaction-mass spectrometry (PTR-MS) for advanced bioprocess monitoring. Biotechnol. Bioeng. 2012, 109, 3059-3069.
    • (2012) Biotechnol. Bioeng. , vol.109 , pp. 3059-3069
    • Luchner, M.1    Gutmann, R.2    Bayer, K.3    Dunkl, J.4
  • 13
    • 0033431934 scopus 로고    scopus 로고
    • Mathematical programming approaches to the synthesis of chemical process systems.
    • Grossmann, I. E., Caballero, J. A., Yeomans, H., Mathematical programming approaches to the synthesis of chemical process systems. Korean J. Chem. Eng. 1999, 16, 407-426.
    • (1999) Korean J. Chem. Eng. , vol.16 , pp. 407-426
    • Grossmann, I.E.1    Caballero, J.A.2    Yeomans, H.3
  • 14
    • 0031933027 scopus 로고    scopus 로고
    • Mathematical modeling and analysis in biochemical engineering: Past accomplishments and future opportunities.
    • Bailey, J. E., Mathematical modeling and analysis in biochemical engineering: Past accomplishments and future opportunities. Biotechnol. Prog. 1998, 14, 8-20.
    • (1998) Biotechnol. Prog. , vol.14 , pp. 8-20
    • Bailey, J.E.1
  • 15
    • 73249131640 scopus 로고    scopus 로고
    • Application of modeling and simulation tools for the evaluation of biocatalytic processes: A future perspective.
    • Sin, G., Woodley, J. M., Gernaey, K. V., Application of modeling and simulation tools for the evaluation of biocatalytic processes: A future perspective. Biotechnol. Prog. 2009, 25, 1529-1538.
    • (2009) Biotechnol. Prog. , vol.25 , pp. 1529-1538
    • Sin, G.1    Woodley, J.M.2    Gernaey, K.V.3
  • 16
    • 84882979449 scopus 로고    scopus 로고
    • Multivariate data analysis for advancing the interpretation of bioprocess measurement and monitoring data
    • Mandenius, C.-F., Titchener-Hooker, N. J. (Eds.), Measurement, Monitoring, Modelling and Control of Bioprocesses, Springer, Berlin Heidelberg
    • Glassey, J., Multivariate data analysis for advancing the interpretation of bioprocess measurement and monitoring data, in: Mandenius, C.-F., Titchener-Hooker, N. J. (Eds.), Measurement, Monitoring, Modelling and Control of Bioprocesses, Springer, Berlin Heidelberg 2013, pp. 167-191.
    • (2013) , pp. 167-191
    • Glassey, J.1
  • 17
    • 77953913430 scopus 로고    scopus 로고
    • Application of mechanistic models to fermentation and biocatalysis for next-generation processes.
    • Gernaey, K. V., Lantz, A. E., Tufvesson, P., Woodley, J. M., Sing, G., Application of mechanistic models to fermentation and biocatalysis for next-generation processes. Trends Biotechnol. 2010, 28, 346-354.
    • (2010) Trends Biotechnol. , vol.28 , pp. 346-354
    • Gernaey, K.V.1    Lantz, A.E.2    Tufvesson, P.3    Woodley, J.M.4    Sing, G.5
  • 18
    • 80052270878 scopus 로고    scopus 로고
    • Multivariate data analysis in pharmaceutics: A tutorial review.
    • Rajalahti, T., Kvalheim, O. M., Multivariate data analysis in pharmaceutics: A tutorial review. Int. J. Pharm. 2011, 417, 280-290.
    • (2011) Int. J. Pharm. , vol.417 , pp. 280-290
    • Rajalahti, T.1    Kvalheim, O.M.2
  • 19
    • 71849097402 scopus 로고    scopus 로고
    • Bakeev, K. A. (Ed.), Process Analytical Technology, Blackwell, Oxford
    • Miller, C. E., Chemometrics in Process Analytical Chemistry, in: Bakeev, K. A. (Ed.), Process Analytical Technology, Blackwell, Oxford 2005, pp. 226-328.
    • (2005) Chemometrics in Process Analytical Chemistry , pp. 226-328
    • Miller, C.E.1
  • 20
    • 84862753278 scopus 로고    scopus 로고
    • Process analytical technology: A critical view of the chemometricians.
    • Pomerantsev, A. L., Rodionova, O. Y., Process analytical technology: A critical view of the chemometricians. J. Chemom. 2012, 26, 299-310.
    • (2012) J. Chemom. , vol.26 , pp. 299-310
    • Pomerantsev, A.L.1    Rodionova, O.Y.2
  • 21
    • 33644821960 scopus 로고    scopus 로고
    • At-line monitoring of ammonium, glucose, methyl oleate and biomass in a complex antibiotic fermentation process using attenuated total reflectance-mid-infrared (ATR-MIR) spectroscopy.
    • Roychoudhury, P., Harvey, L. M., McNeil, B., At-line monitoring of ammonium, glucose, methyl oleate and biomass in a complex antibiotic fermentation process using attenuated total reflectance-mid-infrared (ATR-MIR) spectroscopy. Anal. Chim. Acta 2006, 561, 218-224.
    • (2006) Anal. Chim. Acta , vol.561 , pp. 218-224
    • Roychoudhury, P.1    Harvey, L.M.2    McNeil, B.3
  • 22
    • 84886261844 scopus 로고    scopus 로고
    • 2D-fluorescence and multivariate data analysis for monitoring of sourdough fermentation process.
    • Grote, B., Zense, T., Hitzmann, B., 2D-fluorescence and multivariate data analysis for monitoring of sourdough fermentation process. Food Control 2014, 38, 8-18.
    • (2014) Food Control , vol.38 , pp. 8-18
    • Grote, B.1    Zense, T.2    Hitzmann, B.3
  • 23
    • 34347363115 scopus 로고    scopus 로고
    • On-line process monitoring and chemometric modeling with 2D fluorescence spectra obtained in recombinant E. coli fermentations.
    • Rhee, J. I., Kang, T.-H., On-line process monitoring and chemometric modeling with 2D fluorescence spectra obtained in recombinant E. coli fermentations. Process Biochem. 2007, 42, 1124-1134.
    • (2007) Process Biochem. , vol.42 , pp. 1124-1134
    • Rhee, J.I.1    Kang, T.-H.2
  • 25
    • 0035478854 scopus 로고    scopus 로고
    • Random forests.
    • Breiman, L., Random forests. Mach. Learn. 2001, 45, 5-32.
    • (2001) Mach. Learn. , vol.45 , pp. 5-32
    • Breiman, L.1
  • 26
    • 0345040873 scopus 로고    scopus 로고
    • Classification and regression by randomForest.
    • Liaw, A., Wiener, M., Classification and regression by randomForest. News 2002, 2, 18-22.
    • (2002) News , vol.2 , pp. 18-22
    • Liaw, A.1    Wiener, M.2
  • 30
    • 67349089877 scopus 로고    scopus 로고
    • Data-driven Soft Sensors in the process industry.
    • Kadlec, P., Gabrys, B., Strandt, S., Data-driven Soft Sensors in the process industry. Comput. Chem. Eng. 2009, 33, 795-814.
    • (2009) Comput. Chem. Eng. , vol.33 , pp. 795-814
    • Kadlec, P.1    Gabrys, B.2    Strandt, S.3
  • 31
    • 64249171169 scopus 로고    scopus 로고
    • Multivariate Statistical Analysis in Chemometrics
    • CRC Press, Boca Raton London New York
    • Varmuza, K., Filzmoser, P., Multivariate Statistical Analysis in Chemometrics, CRC Press, Boca Raton London New York 2009.
    • (2009)
    • Varmuza, K.1    Filzmoser, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.