-
2
-
-
35448946098
-
Vacuolar ATPases: Rotary proton pumps in physiology and pathophysiology
-
Forgac, M. (2007) Vacuolar ATPases: rotary proton pumps in physiology and pathophysiology. Nat Rev. Mol. Cell Biol. 8, 917-929
-
(2007)
Nat Rev. Mol. Cell Biol.
, vol.8
, pp. 917-929
-
-
Forgac, M.1
-
3
-
-
0029812004
-
Purification and properties of a cytosolic V1-ATPase
-
Gräf, R., and Harvey, W. R., and Wieczorek, H. (1996) Purification and properties of a cytosolic V1-ATPase. J. Biol. Chem. 271, 20908-20913
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 20908-20913
-
-
Gräf, R.1
Harvey, W.R.2
Wieczorek, H.3
-
4
-
-
0034647941
-
The H subunit (Vma13p) of the yeast V-ATPase inhibits the ATPase activity of cytosolic V1 complexes
-
Parra, K. J., and Keenan, K. L., and Kane, P.M. (2000) The H subunit (Vma13p) of the yeast V-ATPase inhibits the ATPase activity of cytosolic V1 complexes. J. Biol. Chem. 275, 21761-21767
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 21761-21767
-
-
Parra, K.J.1
Keenan, K.L.2
Kane, P.M.3
-
6
-
-
0029063512
-
+-ATPase in vivo
-
+-ATPase in vivo. J. Biol. Chem. 270, 17025-17032
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 17025-17032
-
-
Kane, P.M.1
-
7
-
-
0028898233
-
Regulation of plasma membrane V-ATPase activity by dissociation of peripheral subunits
-
Sumner, J. P., and Dow, J. A., Earley, F. G., Klein, U., Jäger, D., and Wieczorek, H. (1995) Regulation of plasma membrane V-ATPase activity by dissociation of peripheral subunits. J. Biol. Chem. 270, 5649-5653
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 5649-5653
-
-
Sumner, J.P.1
Dow, J.A.2
Earley, F.G.3
Klein, U.4
Jäger, D.5
Wieczorek, H.6
-
8
-
-
84860815342
-
Targeting reversible disassembly as a mechanism of controlling V-ATPase activity
-
Kane, P. M. (2012) Targeting reversible disassembly as a mechanism of controlling V-ATPase activity. Curr. Protein Pept. Sci. 13, 117-123
-
(2012)
Curr. Protein Pept. Sci.
, vol.13
, pp. 117-123
-
-
Kane, P.M.1
-
9
-
-
0035067367
-
Skp1 forms multiple protein complexes, including RAVE, a regulator of V-ATPase assembly
-
Seol, J. H., Shevchenko, A., and Deshaies, R. J. (2001) Skp1 forms multiple protein complexes, including RAVE, a regulator of V-ATPase assembly. Nat. Cell Biol. 3, 384-391
-
(2001)
Nat. Cell Biol.
, vol.3
, pp. 384-391
-
-
Seol, J.H.1
Shevchenko, A.2
Deshaies, R.J.3
-
10
-
-
0037134525
-
The RAVE complex is essential for stable assembly of the yeast V-ATPase
-
Smardon, A. M., Tarsio, M., and Kane, P. M. (2002) The RAVE complex is essential for stable assembly of the yeast V-ATPase. J. Biol. Chem. 277, 13831-13839
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 13831-13839
-
-
Smardon, A.M.1
Tarsio, M.2
Kane, P.M.3
-
11
-
-
20244389988
-
Cdc53/cullin and the essential hrt1 RING-H2 subunit of SCF define a ubiquitin ligase module that activates the E2 enzyme cdc34
-
Seol, J. H., and Feldman, R. M., Zachariae, W., Shevchenko, A., Correll, C. C., Lyapina, S., Chi, Y., Galova, M., Claypool, J., Sandmeyer, S., Nasmyth, K., and Deshaies, R. J. (1999) Cdc53/cullin and the essential Hrt1 RING-H2 subunit of SCF define a ubiquitin ligase module that activates the E2 enzyme Cdc34. Genes Dev. 13, 1614-1626
-
(1999)
Genes Dev.
, vol.13
, pp. 1614-1626
-
-
Seol, J.H.1
Feldman, R.M.2
Zachariae, W.3
Shevchenko, A.4
Correll, C.C.5
Lyapina, S.6
Chi, Y.7
Galova, M.8
Claypool, J.9
Sandmeyer, S.10
Nasmyth, K.11
Deshaies, R.J.12
-
12
-
-
0030602813
-
SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box
-
Bai, C., Sen, P., Hofmann, K., Ma, L., Goebl, M., Harper, J.W., and Elledge, S. J. (1996) SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box. Cell 86, 263-274
-
(1996)
Cell
, vol.86
, pp. 263-274
-
-
Bai, C.1
Sen, P.2
Hofmann, K.3
Ma, L.4
Goebl, M.5
Harper, J.W.6
Elledge, S.J.7
-
13
-
-
84893518146
-
The RAVE complex is an isoform-specific V-ATPase assembly factor in yeast
-
Smardon, A. M., and Diab, H. I., Tarsio, M., Diakov, T. T., and Nasab, N. D., West, R. W., and Kane, P. M. (2014) The RAVE complex is an isoform-specific V-ATPase assembly factor in yeast. Mol. Biol. Cell 25, 356-367
-
(2014)
Mol. Biol. Cell
, vol.25
, pp. 356-367
-
-
Smardon, A.M.1
Diab, H.I.2
Tarsio, M.3
Diakov, T.T.4
Nasab, N.D.5
West, R.W.6
Kane, P.M.7
-
14
-
-
84859737001
-
Subunit interactions at the V1-V0 interface in yeast vacuolar ATPase
-
Oot, R. A., and Wilkens, S. (2012) Subunit interactions at the V1-V0 interface in yeast vacuolar ATPase. J. Biol. Chem. 287, 13396-13406
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 13396-13406
-
-
Oot, R.A.1
Wilkens, S.2
-
15
-
-
77955298786
-
Domain characterization and interaction of the yeast vacuolar ATPase subunit C with the peripheral stator stalk subunits E and G
-
Oot, R. A., and Wilkens, S. (2010) Domain characterization and interaction of the yeast vacuolar ATPase subunit C with the peripheral stator stalk subunits E and G. J. Biol. Chem. 285, 24654-24664
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 24654-24664
-
-
Oot, R.A.1
Wilkens, S.2
-
16
-
-
84929335211
-
Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase
-
Zhao, J., Benlekbir, S., and Rubinstein, J. L. (2015) Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase. Nature 521, 241-245
-
(2015)
Nature
, vol.521
, pp. 241-245
-
-
Zhao, J.1
Benlekbir, S.2
Rubinstein, J.L.3
-
17
-
-
84904622964
-
Reversible disassembly of the yeast V-ATPase revisited under in vivo conditions
-
Tabke, K., Albertmelcher, A., Vitavska, O., Huss, M., and Schmitz, H. P., and Wieczorek, H. (2014) Reversible disassembly of the yeast V-ATPase revisited under in vivo conditions. Biochem. J. 462, 185-197
-
(2014)
Biochem. J.
, vol.462
, pp. 185-197
-
-
Tabke, K.1
Albertmelcher, A.2
Vitavska, O.3
Huss, M.4
Schmitz, H.P.5
Wieczorek, H.6
-
19
-
-
32344438588
-
Purification and properties of rabconnectin-3
-
Sakisaka, T., and Takai, Y. (2005) Purification and properties of rabconnectin-3. Methods Enzymol. 403, 401-407
-
(2005)
Methods Enzymol.
, vol.403
, pp. 401-407
-
-
Sakisaka, T.1
Takai, Y.2
-
20
-
-
78049397293
-
Rabconnectin-3 is a functional regulator of mammalian notch signaling
-
Sethi, N., Yan, Y., Quek, D., Schupbach, T., and Kang, Y. (2010) Rabconnectin-3 is a functional regulator of mammalian notch signaling. J. Biol. Chem. 285, 34757-34764
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 34757-34764
-
-
Sethi, N.1
Yan, Y.2
Quek, D.3
Schupbach, T.4
Kang, Y.5
-
21
-
-
69949137273
-
The vacuolar proton pump, V-ATPase, is required for notch signaling and endosomal trafficking in drosophila
-
Yan, Y., Denef, N., and Schüpbach, T. (2009) The vacuolar proton pump, V-ATPase, is required for notch signaling and endosomal trafficking in Drosophila. Dev. Cell 17, 387-402
-
(2009)
Dev. Cell
, vol.17
, pp. 387-402
-
-
Yan, Y.1
Denef, N.2
Schüpbach, T.3
-
23
-
-
84865360175
-
Identifying true protein complex constituents in interaction proteomics: The example of the DMXL2 protein complex
-
Li, K. W., Chen, N., Klemmer, P., Koopmans, F., Karupothula, R., and Smit, A. B. (2012) Identifying true protein complex constituents in interaction proteomics: the example of the DMXL2 protein complex. Proteomics 12, 2428-2432
-
(2012)
Proteomics
, vol.12
, pp. 2428-2432
-
-
Li, K.W.1
Chen, N.2
Klemmer, P.3
Koopmans, F.4
Karupothula, R.5
Smit, A.B.6
-
24
-
-
84941042486
-
CDD: Ncbi's conserved domain database
-
Marchler-Bauer, A., Derbyshire, M. K., and Gonzales, N. R., Lu, S., Chitsaz, F., Geer, L. Y., and Geer, R. C., He, J., Gwadz, M., Hurwitz, D. I., Lanczycki, C.J., Lu, F., and Marchler, G. H., Song, J. S., Thanki, N., Wang, Z., and Yamashita, R. A., Zhang, D., Zheng, C., and Bryant, S. H. (2015) CDD: NCBI's conserved domain database. Nucleic Acids Res. 43, D222-D226
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D222-D226
-
-
Marchler-Bauer, A.1
Derbyshire, M.K.2
Gonzales, N.R.3
Lu, S.4
Chitsaz, F.5
Geer, L.Y.6
Geer, R.C.7
He, J.8
Gwadz, M.9
Hurwitz, D.I.10
Lanczycki, C.J.11
Lu, F.12
Marchler, G.H.13
Song, J.S.14
Thanki, N.15
Wang, Z.16
Yamashita, R.A.17
Zhang, D.18
Zheng, C.19
Bryant, S.H.20
more..
-
25
-
-
0142089024
-
Assembly and regulation of the yeast vacuolar H+-ATPase
-
Kane, P. M., and Smardon, A. M. (2003) Assembly and regulation of the yeast vacuolar H+-ATPase. J. Bioenerg. Biomembr. 35, 313-321
-
(2003)
J. Bioenerg. Biomembr.
, vol.35
, pp. 313-321
-
-
Kane, P.M.1
Smardon, A.M.2
-
26
-
-
0031820288
-
Additional modules for versatile and economical PCR-based gene deletion and modification in saccharomyces cerevisiae
-
Longtine, M. S., McKenzie, A., 3rd, Demarini, D. J., Shah, N. G., Wach, A., Brachat, A., Philippsen, P., and Pringle, J. R. (1998) Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14, 953-961
-
(1998)
Yeast
, vol.14
, pp. 953-961
-
-
Longtine, M.S.1
McKenzie, A.2
Demarini, D.J.3
Shah, N.G.4
Wach, A.5
Brachat, A.6
Philippsen, P.7
Pringle, J.R.8
-
27
-
-
0029871347
-
PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. Cerevisiae
-
Wach, A. (1996) PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae. Yeast 12, 259-265
-
(1996)
Yeast
, vol.12
, pp. 259-265
-
-
Wach, A.1
-
28
-
-
0026562884
-
Improved method for high efficiency transformation of intact yeast cells
-
Gietz, D., St Jean, A., Woods, R. A., and Schiestl, R. H. (1992) Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res. 20, 1425
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 1425
-
-
Gietz, D.1
St Jean, A.2
Woods, R.A.3
Schiestl, R.H.4
-
29
-
-
0030840519
-
Heterologous HIS3 marker and GFP reporter modules for PCR-targeting in saccharomyces cerevisiae
-
Wach, A., Brachat, A., Alberti-Segui, C., Rebischung, C., and Philippsen, P. (1997) Heterologous HIS3 marker and GFP reporter modules for PCR-targeting in Saccharomyces cerevisiae. Yeast 13, 1065-1075
-
(1997)
Yeast
, vol.13
, pp. 1065-1075
-
-
Wach, A.1
Brachat, A.2
Alberti-Segui, C.3
Rebischung, C.4
Philippsen, P.5
-
31
-
-
67649405059
-
Subunit interactions and requirements for inhibition of the yeast V1-ATPase
-
Diab, H., Ohira, M., Liu, M., Cobb, E., and Kane, P. M. (2009) Subunit interactions and requirements for inhibition of the yeast V1-ATPase. J. Biol. Chem. 284, 13316-13325
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 13316-13325
-
-
Diab, H.1
Ohira, M.2
Liu, M.3
Cobb, E.4
Kane, P.M.5
-
32
-
-
71849104860
-
Protein measurement with the folin phenol reagent
-
Lowry, O., H., Rosebrough, N. J., Farr, A., L., and Randall, R., J. (1951) Protein measurement with the Folin phenol reagent. J. Biol. Chem. 193, 265-275
-
(1951)
J. Biol. Chem.
, vol.193
, pp. 265-275
-
-
Lowry, O.H.1
Rosebrough, N.J.2
Farr, A.L.3
Randall, R.J.4
-
34
-
-
0030839829
-
Gene identification using the yeast two-hybrid system
-
Bai, C., and Elledge, S. J. (1997) Gene identification using the yeast two-hybrid system. Methods Enzymol. 283, 141-156
-
(1997)
Methods Enzymol.
, vol.283
, pp. 141-156
-
-
Bai, C.1
Elledge, S.J.2
-
35
-
-
0030455820
-
Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast
-
James, P., Halladay, J., and Craig, E. A. (1996) Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics 144, 1425-1436
-
(1996)
Genetics
, vol.144
, pp. 1425-1436
-
-
James, P.1
Halladay, J.2
Craig, E.A.3
-
36
-
-
0033578684
-
Protein secondary structure prediction based on position-specific scoring matrices
-
Jones, D. T. (1999) Protein secondary structure prediction based on position-specific scoring matrices. J. Mol. Biol. 292, 195-202
-
(1999)
J. Mol. Biol.
, vol.292
, pp. 195-202
-
-
Jones, D.T.1
-
37
-
-
33845652714
-
Skp1p regulates soi3p/Rav1p association with endosomal membranes but is not required for vacuolar ATPase assembly
-
Brace, E. J., and Parkinson, L. P., and Fuller, R. S. (2006) Skp1p regulates Soi3p/Rav1p association with endosomal membranes but is not required for vacuolar ATPase assembly. Eukaryot. Cell 5, 2104-2113
-
(2006)
Eukaryot. Cell
, vol.5
, pp. 2104-2113
-
-
Brace, E.J.1
Parkinson, L.P.2
Fuller, R.S.3
-
38
-
-
84870842660
-
Structure of the vacuolar-type ATPase from saccharomyces cerevisiae at 11 - A resolution
-
Benlekbir, S., and Bueler, S. A., and Rubinstein, J. L. (2012) Structure of the vacuolar-type ATPase from Saccharomyces cerevisiae at 11 - A resolution. Nat. Struct. Mol. Biol. 19, 1356-1362
-
(2012)
Nat. Struct. Mol. Biol.
, vol.19
, pp. 1356-1362
-
-
Benlekbir, S.1
Bueler, S.A.2
Rubinstein, J.L.3
-
40
-
-
77955405903
-
Cytosolic pH is a second messenger for glucose and regulates the PKA pathway through V-ATPase
-
Dechant, R., Binda, M., Lee, S. S., Pelet, S., Winderickx, J., and Peter, M. (2010) Cytosolic pH is a second messenger for glucose and regulates the PKA pathway through V-ATPase. EMBO J. 29, 2515-2526
-
(2010)
EMBO J.
, vol.29
, pp. 2515-2526
-
-
Dechant, R.1
Binda, M.2
Lee, S.S.3
Pelet, S.4
Winderickx, J.5
Peter, M.6
-
41
-
-
84930074657
-
The phyre2 web portal for protein modeling, prediction and analysis
-
Kelley, L. A., Mezulis, S., Yates, C. M., and Wass, M. N., and Sternberg, M. J. (2015) The Phyre2 web portal for protein modeling, prediction and analysis. Nat. Protoc. 10, 845-858
-
(2015)
Nat. Protoc.
, vol.10
, pp. 845-858
-
-
Kelley, L.A.1
Mezulis, S.2
Yates, C.M.3
Wass, M.N.4
Sternberg, M.J.5
-
42
-
-
0141557547
-
The structure of aip1p, a WD repeat protein that regulates cofilin-mediated actin depolymerization
-
Voegtli, W. C., Madrona, A. Y., and Wilson, D. K. (2003) The structure of Aip1p, a WD repeat protein that regulates Cofilin-mediated actin depolymerization. J. Biol. Chem. 278, 34373-34379
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 34373-34379
-
-
Voegtli, W.C.1
Madrona, A.Y.2
Wilson, D.K.3
-
43
-
-
77954310096
-
Structure of coatomer cage proteins and the relationship among COPI, COPII, and clathrin vesicle coats
-
Lee, C., and Goldberg, J. (2010) Structure of coatomer cage proteins and the relationship among COPI, COPII, and clathrin vesicle coats. Cell 142, 123-132
-
(2010)
Cell
, vol.142
, pp. 123-132
-
-
Lee, C.1
Goldberg, J.2
-
44
-
-
53849140811
-
Structural organization of the V-ATPase and its implications for regulatory assembly and disassembly
-
Diepholz, M., Börsch, M., and Böttcher, B. (2008) Structural organization of the V-ATPase and its implications for regulatory assembly and disassembly. Biochem. Soc. Trans. 36, 1027-1031
-
(2008)
Biochem. Soc. Trans.
, vol.36
, pp. 1027-1031
-
-
Diepholz, M.1
Börsch, M.2
Böttcher, B.3
-
45
-
-
58149088485
-
Structure of the yeast vacuolar ATPase
-
Zhang, Z., Zheng, Y., Mazon, H., Milgrom, E., Kitagawa, N., Kish-Trier, E., Heck, A. J., and Kane, P. M., and Wilkens, S. (2008) Structure of the yeast vacuolar ATPase. J. Biol. Chem. 283, 35983-35995
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 35983-35995
-
-
Zhang, Z.1
Zheng, Y.2
Mazon, H.3
Milgrom, E.4
Kitagawa, N.5
Kish-Trier, E.6
Heck, A.J.7
Kane, P.M.8
Wilkens, S.9
-
46
-
-
84923923054
-
+-ATPase rotary motor reveals new mechanistic insights
-
+-ATPase rotary motor reveals new mechanistic insights. Structure 23, 461-471
-
(2015)
Structure
, vol.23
, pp. 461-471
-
-
Rawson, S.1
Phillips, C.2
Huss, M.3
Tiburcy, F.4
Wieczorek, H.5
Trinick, J.6
Harrison, M.A.7
Muench, S.P.8
-
47
-
-
12144279605
-
Crystal structure of yeast V-ATPase subunit C reveals its stator function
-
Drory, O., Frolow, F., and Nelson, N. (2004) Crystal structure of yeast V-ATPase subunit C reveals its stator function. EMBORep. 5, 1148-1152
-
(2004)
EMBORep.
, vol.5
, pp. 1148-1152
-
-
Drory, O.1
Frolow, F.2
Nelson, N.3
-
48
-
-
84868582759
-
Crystal structure of the yeast vacuolar ATPase heterotrimeric EGC(head) peripheral stalk complex
-
Oot, R. A., and Huang, L. S., Berry, E. A., and Wilkens, S. (2012) Crystal structure of the yeast vacuolar ATPase heterotrimeric EGC(head) peripheral stalk complex. Structure 20, 1881-1892
-
(2012)
Structure
, vol.20
, pp. 1881-1892
-
-
Oot, R.A.1
Huang, L.S.2
Berry, E.A.3
Wilkens, S.4
-
49
-
-
23044497763
-
Cysteine-mediated cross-linking indicates that subunit C of the V-ATPase is in close proximity to subunits E and G of the V1 domain and subunit a of the V0 domain
-
Inoue, T., and Forgac, M. (2005) Cysteine-mediated cross-linking indicates that subunit C of the V-ATPase is in close proximity to subunits E and G of the V1 domain and subunit a of the V0 domain. J. Biol. Chem. 280, 27896-27903
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 27896-27903
-
-
Inoue, T.1
Forgac, M.2
|