메뉴 건너뛰기




Volumn 59, Issue 11, 2015, Pages 6834-6843

Lack of mutational hot spots during decitabine-mediated HIV-1 mutagenesis

Author keywords

[No Author keywords available]

Indexed keywords

DECITABINE; GUANINE; AZACITIDINE;

EID: 84946226461     PISSN: 00664804     EISSN: 10986596     Source Type: Journal    
DOI: 10.1128/AAC.01644-15     Document Type: Article
Times cited : (12)

References (48)
  • 2
    • 11844274684 scopus 로고    scopus 로고
    • The error threshold
    • Biebricher CK, Eigen M. 2005. The error threshold. Virus Res 107:117-127. http://dx.doi.org/10.1016/j.virusres.2004.11.002.
    • (2005) Virus Res , vol.107 , pp. 117-127
    • Biebricher, C.K.1    Eigen, M.2
  • 3
    • 0037108885 scopus 로고    scopus 로고
    • Error catastrophe and antiviral strategy
    • Eigen M. 2002. Error catastrophe and antiviral strategy. Proc Natl Acad Sci U S A 99:13374-13376. http://dx.doi.org/10.1073/pnas.212514799.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 13374-13376
    • Eigen, M.1
  • 6
    • 81755165933 scopus 로고    scopus 로고
    • Lethal mutagenesis of viruses
    • Perales C, Martin V, Domingo E. 2011. Lethal mutagenesis of viruses. Curr Opin Virol 1:419-422. http://dx.doi.org/10.1016/j.coviro.2011.09.001.
    • (2011) Curr Opin Virol , vol.1 , pp. 419-422
    • Perales, C.1    Martin, V.2    Domingo, E.3
  • 7
    • 84890511278 scopus 로고    scopus 로고
    • Structure-activity relationships and design of viral mutagens and application to lethal mutagenesis
    • Bonnac LF, Mansky LM, Patterson SE 2013. Structure-activity relationships and design of viral mutagens and application to lethal mutagenesis. J Med Chem 56:9403-9414. http://dx.doi.org/10.1021/jm400653j.
    • (2013) J Med Chem , vol.56 , pp. 9403-9414
    • Bonnac, L.F.1    Mansky, L.M.2    Patterson, S.E.3
  • 9
    • 34447248532 scopus 로고    scopus 로고
    • Analysis of ribavirin mutagenicity in human hepatitis C virus infection
    • Chevaliez S, Brillet R, Lazaro E., Hezode C, Pawlotsky JM. 2007. Analysis of ribavirin mutagenicity in human hepatitis C virus infection. J Virol 81:7732-7741. http://dx.doi.org/10.1128/JVI.00382-07.
    • (2007) J Virol , vol.81 , pp. 7732-7741
    • Chevaliez, S.1    Brillet, R.2    Lazaro, E.3    Hezode, C.4    Pawlotsky, J.M.5
  • 10
    • 66149098217 scopus 로고    scopus 로고
    • Effect of ribavirin on the mutation rate and spectrum of hepatitis C virus in vivo
    • Cuevas JM, Gonzalez-Candelas F, Moya A., Sanjuan R. 2009. Effect of ribavirin on the mutation rate and spectrum of hepatitis C virus in vivo. J Virol 83:5760-5764. http://dx.doi.org/10.1128/JVI.00201-09.
    • (2009) J Virol , vol.83 , pp. 5760-5764
    • Cuevas, J.M.1    Gonzalez-Candelas, F.2    Moya, A.3    Sanjuan, R.4
  • 12
    • 20444414897 scopus 로고    scopus 로고
    • KP-1212/1461, a nucleoside designed for the treatment of HIV byviral mutagenesis
    • Harris KS, Brabant W, Styrchak S., Gall A, Daifuku R. 2005. KP-1212/1461, a nucleoside designed for the treatment of HIV byviral mutagenesis. Antiviral Res 67:1-9. http://dx.doi.org/10.1016/j.antiviral.2005.03.004.
    • (2005) Antiviral Res , vol.67 , pp. 1-9
    • Harris, K.S.1    Brabant, W.2    Styrchak, S.3    Gall, A.4    Daifuku, R.5
  • 17
    • 84924773343 scopus 로고    scopus 로고
    • Favipiravir elicits antiviral mutagenesis during virus replication in vivo
    • Arias A, Thorne L, Goodfellow I. 2014. Favipiravir elicits antiviral mutagenesis during virus replication in vivo. Elife 3:e03679.
    • (2014) Elife , vol.3
    • Arias, A.1    Thorne, L.2    Goodfellow, I.3
  • 20
    • 84880006467 scopus 로고    scopus 로고
    • The ambiguous base-pairing and high substrate efficiency of T-705 (favipiravir) ribofuranosyl 5'-triphosphate towards influenza A virus polymerase
    • Jin Z, Smith LK, Rajwanshi V.K., Kim B., Deval J. 2013. The ambiguous base-pairing and high substrate efficiency of T-705 (favipiravir) ribofuranosyl 5'-triphosphate towards influenza A virus polymerase. PLoS One 8:e68347. http://dx.doi.org/10.1371/journal.pone.0068347.
    • (2013) PLoS One , vol.8
    • Jin, Z.1    Smith, L.K.2    Rajwanshi, V.K.3    Kim, B.4    Deval, J.5
  • 22
    • 77956040787 scopus 로고    scopus 로고
    • Exploiting drug repositioning for discovery of a novel HIV combination therapy
    • Clouser CL, Patterson SE, Mansky LM 2010. Exploiting drug repositioning for discovery of a novel HIV combination therapy. J Virol 84: 9301-9309. http://dx.doi.org/10.1128/JVI.01006-10.
    • (2010) J Virol , vol.84 , pp. 9301-9309
    • Clouser, C.L.1    Patterson, S.E.2    Mansky, L.M.3
  • 23
    • 70350291512 scopus 로고    scopus 로고
    • 5-azacytidine can induce lethal mutagenesis in human immunodeficiency virus type 1
    • Dapp MJ, Clouser CL, Patterson S, Mansky LM 2009. 5-Azacytidine can induce lethal mutagenesis in human immunodeficiency virus type 1. J Virol 83:11950-11958. http://dx.doi.org/10.1128/JVI.01406-09.
    • (2009) J Virol , vol.83 , pp. 11950-11958
    • Dapp, M.J.1    Clouser, C.L.2    Patterson, S.3    Mansky, L.M.4
  • 25
    • 84882417741 scopus 로고    scopus 로고
    • The APOBEC3 family of retroelement restriction factors
    • Refsland EW, Harris RS 2013. The APOBEC3 family of retroelement restriction factors. Curr Top Microbiol Immunol 371:1-27.
    • (2013) Curr Top Microbiol Immunol , vol.371 , pp. 1-27
    • Refsland, E.W.1    Harris, R.S.2
  • 27
    • 84861313225 scopus 로고    scopus 로고
    • Small-molecule inhibition of human immunodeficiency virus type 1 replication by targeting the interaction between vif and elongin C
    • Zuo T, Liu D, Lv W., Wang X, Wang J, Lv M., Huang W, Wu J, Zhang H., Jin H, Zhang L, Kong W., Yu X. 2012. Small-molecule inhibition of human immunodeficiency virus type 1 replication by targeting the interaction between Vif and Elongin C. J Virol 86:5497-5507. http://dx.doi.org/10.1128/JVI.06957-11.
    • (2012) J Virol , vol.86 , pp. 5497-5507
    • Zuo, T.1    Liu, D.2    Lv, W.3    Wang, X.4    Wang, J.5    Lv, M.6    Huang, W.7    Wu, J.8    Zhang, H.9    Jin, H.10    Zhang, L.11    Kong, W.12    Yu, X.13
  • 30
    • 84867583318 scopus 로고    scopus 로고
    • Anti-HIV-1 activity of resveratrol derivatives and synergistic inhibition of HIV-1 by the combination of resveratrol and decitabine
    • Clouser CL, Chauhan J, Bess M.A., van Oploo JL, Zhou D, Dimick-Gray S, Mansky LM, Patterson SE 2012. Anti-HIV-1 activity of resveratrol derivatives and synergistic inhibition of HIV-1 by the combination of resveratrol and decitabine. Bioorg Med Chem Lett 22:6642-6646. http://dx.doi.org/10.1016/j.bmcl.2012.08.108.
    • (2012) Bioorg Med Chem Lett , vol.22 , pp. 6642-6646
    • Clouser, C.L.1    Chauhan, J.2    Bess, M.A.3    Van Oploo, J.L.4    Zhou, D.5    Dimick-Gray, S.6    Mansky, L.M.7    Patterson, S.E.8
  • 32
    • 84889252941 scopus 로고    scopus 로고
    • Characterization of permeability, stability and anti-HIV-1 activity of decitabine and gemcitabine divalerate prodrugs
    • Clouser CL, Bonnac L, Mansky L.M., Patterson SE. 2014. Characterization of permeability, stability and anti-HIV-1 activity of decitabine and gemcitabine divalerate prodrugs. Antivir Chem Chemother 23:223-230. http://dx.doi.org/10.3851/IMP2682.
    • (2014) Antivir Chem Chemother , vol.23 , pp. 223-230
    • Clouser, C.L.1    Bonnac, L.2    Mansky, L.M.3    Patterson, S.E.4
  • 33
    • 84936776340 scopus 로고    scopus 로고
    • HIV-1 and HIV-2 exhibit similar mutation frequencies and spectra in the absence of G-to-A hypermutation
    • Rawson JM, Landman SR, Reilly C.S., Mansky LM. 2015. HIV-1 and HIV-2 exhibit similar mutation frequencies and spectra in the absence of G-to-A hypermutation. Retrovirology 12:60. http://dx.doi.org/10.1186/s12977-015-0180-6.
    • (2015) Retrovirology , vol.12 , pp. 60
    • Rawson, J.M.1    Landman, S.R.2    Reilly, C.S.3    Mansky, L.M.4
  • 35
    • 84949346776 scopus 로고
    • Generalized linear mixed models: A pseudo-likelihood approach
    • Wolfinger R, O'Connell M. 1993. Generalized linear mixed models: a pseudo-likelihood approach. J Stat Comput Simul 48:233-243. http://dx.doi.org/10.1080/00949659308811554.
    • (1993) J Stat Comput Simul , vol.48 , pp. 233-243
    • Wolfinger, R.1    O'Connell, M.2
  • 36
    • 0031001563 scopus 로고    scopus 로고
    • Mutagenicity of 5-aza-2'-deoxycytidine is mediated by the Mammalian DNA methyltransferase
    • Jackson-Grusby L., Laird PW, Magge S.N., Moeller BJ, Jaenisch R. 1997. Mutagenicity of 5-aza-2'-deoxycytidine is mediated by the mammalian DNA methyltransferase. Proc Natl Acad Sci U S A 94:4681-4685. http://dx.doi.org/10.1073/pnas.94.9.4681.
    • (1997) Proc Natl Acad Sci U S A , vol.94 , pp. 4681-4685
    • Jackson-Grusby, L.1    Laird, P.W.2    Magge, S.N.3    Moeller, B.J.4    Jaenisch, R.5
  • 37
    • 0019856151 scopus 로고
    • High-performance liquid chromatographic analysis of chemical stability of 5-aza-2'-deoxycytidine
    • Lin KT, Momparler RL, Rivard GE 1981. High-performance liquid chromatographic analysis of chemical stability of 5-aza-2'-deoxycytidine. J Pharm Sci 70:1228-1232. http://dx.doi.org/10.1002/jps.2600701112.
    • (1981) J Pharm Sci , vol.70 , pp. 1228-1232
    • Lin, K.T.1    Momparler, R.L.2    Rivard, G.E.3
  • 38
    • 33645521995 scopus 로고    scopus 로고
    • Characterization of decomposition products and preclinical and low dose clinical pharmacokinetics ofdecitabine (5-aza-2'-deoxycytidine)byanew liquid chromatography/tandem mass spectrometry quantification method
    • Liu Z, Marcucci G, Byrd J.C., Grever M., Xiao J, Chan KK. 2006. Characterization of decomposition products and preclinical and low dose clinical pharmacokinetics ofdecitabine (5-aza-2'-deoxycytidine)byanew liquid chromatography/tandem mass spectrometry quantification method. Rapid Commun Mass Spectrom 20:1117-1126. http://dx.doi.org/10.1002/rcm.2423.
    • (2006) Rapid Commun Mass Spectrom , vol.20 , pp. 1117-1126
    • Liu, Z.1    Marcucci, G.2    Byrd, J.C.3    Grever, M.4    Xiao, J.5    Chan, K.K.6
  • 39
    • 67449100820 scopus 로고    scopus 로고
    • Chemical decomposition of 5-aza-2'-deoxycytidine (decitabine): Kinetic analyses and identification ofproducts by NMR, HPLC, and mass spectrometry
    • Rogstad DK, Herring JL, Theruvathu J.A., Burdzy A., Perry CC, Neidigh JW, Sowers LC. 2009. Chemical decomposition of 5-aza-2'-deoxycytidine (decitabine): kinetic analyses and identification ofproducts by NMR, HPLC, and mass spectrometry. Chem Res Toxicol 22:1194-1204. http://dx.doi.org/10.1021/tx900131u.
    • (2009) Chem Res Toxicol , vol.22 , pp. 1194-1204
    • Rogstad, D.K.1    Herring, J.L.2    Theruvathu, J.A.3    Burdzy, A.4    Perry, C.C.5    Neidigh, J.W.6    Sowers, L.C.7
  • 40
    • 84868136467 scopus 로고    scopus 로고
    • 2'-deoxyriboguanylurea, the primary breakdown product of 5-aza-2'-deoxyribocytidine, is a mutagen, an epimutagen, an inhibitor of DNA methyltransferases and an inducer of 5-azacytidine-type fragile sites
    • Lamparska K, Clark J, Babilonia G., Bedell V, Yip W, Smith SS 2012. 2'-Deoxyriboguanylurea, the primary breakdown product of 5-aza-2'-deoxyribocytidine, is a mutagen, an epimutagen, an inhibitor of DNA methyltransferases and an inducer of 5-azacytidine-type fragile sites. Nucleic Acids Res 40:9788-9801. http://dx.doi.org/10.1093/nar/gks706.
    • (2012) Nucleic Acids Res , vol.40 , pp. 9788-9801
    • Lamparska, K.1    Clark, J.2    Babilonia, G.3    Bedell, V.4    Yip, W.5    Smith, S.S.6
  • 41
    • 77955170877 scopus 로고    scopus 로고
    • Therapy with azanucleosides for myelodysplastic syndromes
    • Quintas-Cardama A., Santos FP, Garcia-Manero G. 2010. Therapy with azanucleosides for myelodysplastic syndromes. Nat Rev Clin Oncol 7:433-444. http://dx.doi.org/10.1038/nrclinonc.2010.87.
    • (2010) Nat Rev Clin Oncol , vol.7 , pp. 433-444
    • Quintas-Cardama, A.1    Santos, F.P.2    Garcia-Manero, G.3
  • 42
    • 84925283900 scopus 로고    scopus 로고
    • Quantitative determination of decitabine incorporation into DNA and its effect on mutation rates in human cancer cells
    • Oz S, Raddatz G, Rius M., Blagitko-Dorfs N, Lubbert M, Maercker C., Lyko F. 2014. Quantitative determination of decitabine incorporation into DNA and its effect on mutation rates in human cancer cells. Nucleic Acids Res 42:e152. http://dx.doi.org/10.1093/nar/gku775.
    • (2014) Nucleic Acids Res , vol.42 , pp. e152
    • Oz, S.1    Raddatz, G.2    Rius, M.3    Blagitko-Dorfs, N.4    Lubbert, M.5    Maercker, C.6    Lyko, F.7
  • 44
    • 0029075130 scopus 로고
    • Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase
    • Mansky LM, Temin HM 1995. Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase. J Virol 69:5087-5094.
    • (1995) J Virol , vol.69 , pp. 5087-5094
    • Mansky, L.M.1    Temin, H.M.2
  • 45
    • 0030060447 scopus 로고    scopus 로고
    • Forward mutation rate of human immunodeficiency virus type 1 in a tlymphoid cell line
    • Mansky LM. 1996. Forward mutation rate of human immunodeficiency virus type 1 in a Tlymphoid cell line. AIDS Res Hum Retroviruses 12:307-314. http://dx.doi.org/10.1089/aid.1996.12.307.
    • (1996) AIDS Res Hum Retroviruses , vol.12 , pp. 307-314
    • Mansky, L.M.1
  • 46
    • 77956820495 scopus 로고    scopus 로고
    • Nature, position, and frequency of mutations made in a single cycle of HIV-1 replication
    • Abram ME, Ferris AL, Shao W, Alvord W.G., Hughes SH. 2010. Nature, position, and frequency of mutations made in a single cycle of HIV-1 replication. J Virol 84:9864-9878. http://dx.doi.org/10.1128/JVI.00915-10.
    • (2010) J Virol , vol.84 , pp. 9864-9878
    • Abram, M.E.1    Ferris, A.L.2    Shao, W.3    Alvord, W.G.4    Hughes, S.H.5
  • 47
    • 33750210516 scopus 로고    scopus 로고
    • Twin gradients in APOBEC3 edited HIV-1 DNA reflect the dynamics of lentiviral replication
    • Suspene R, Rusniok C, Vartanian J.P., Wain-Hobson S. 2006. Twin gradients in APOBEC3 edited HIV-1 DNA reflect the dynamics of lentiviral replication. Nucleic Acids Res 34:4677-4684. http://dx.doi.org/10.1093/nar/gkl555.
    • (2006) Nucleic Acids Res , vol.34 , pp. 4677-4684
    • Suspene, R.1    Rusniok, C.2    Vartanian, J.P.3    Wain-Hobson, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.