Experimental characterization of adsorbed protein orientation, conformation, and bioactivity

Biointerphases

Volumn 10, Issue 1, 2015, Pages

  Thyparambil, Aby A ^a   Wei, Yang ^a   Latour, Robert A ^a  

^a AMRL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADSORPTION; BIOACTIVITY; DICHROISM; ESTERS; FUSED SILICA;

BIOTECHNOLOGICAL APPLICATIONS; CIRCULAR DICHROISM SPECTROPOLARIMETRY; COMMUNICATION AND INTERACTION; EXPERIMENTAL CHARACTERIZATION; HEN EGG WHITE LYSOZYME; PROTEIN SECONDARY STRUCTURE; STRUCTURE-FUNCTION RELATIONSHIP; SURROUNDING ENVIRONMENT;

PROTEINS;

POLYMER; PROTEIN; PROTEIN BINDING;

ADSORPTION; CHEMICAL ANALYSIS; CHEMISTRY; METABOLISM; PROCEDURES; PROTEIN CONFORMATION;

ADSORPTION; CHEMISTRY TECHNIQUES, ANALYTICAL; POLYMERS; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEINS;

EID: 84945475215     PISSN: 19348630     EISSN: 15594106     Source Type: Journal    
DOI: 10.1116/1.4906485     Document Type: Article

References (78)

1. W. Itamar, R. Azalia, S. Benjamin, R. Dalia, and K. Eugenii, Adv. Mater. 5, 912 (1993).10.1002/adma.19930051206
2. A. Larsson, T. Ekblad, O. Andersson, and B. Liedberg, Biomacromolecules 8, 287 (2007).10.1021/bm060685g
3. C. Czeslik, G. Jackler, and C. Royer, Spectroscopy 16, 139 (2002).10.1155/2002/473035
4. J. R. Knowles, Nature 350, 121 (1991).10.1038/350121a0
5. A. G. Shard and P. E. Tomlins, Regener. Med. 1, 789 (2006).10.2217/17460751.1.6.789
6. T. S. Tsapikouni and Y. F. Missirlis, Mater. Sci. Eng., B 152, 2 (2008).10.1016/j.mseb.2008.06.007
7. B. Kasemo and J. Gold, Adv. Dent. Res. 13, 8 (1999).10.1177/08959374990130011901
8. R. Latkany, A. Tsuk, M. S. Sheu, I. H. Loh, and V. Trinkaus-Randall, J. Biomed. Mater. Res. 36, 29 (1997).10.1002/(SICI)1097-4636(199707)36:1<29::AID-JBM4>3.0.CO;2-N
9. N. Wisniewski, F. Moussy, and W. M. Reichert, Fresenius' J. Anal. Chem. 366, 611 (2000).10.1007/s002160051556
10. V. W. Bramwell, J. E. Eyles, and H. Oya Alpar, Adv. Drug Delivery Rev. 57, 1247 (2005).10.1016/j.addr.2005.01.010
11. A. E. Herr, Protein Microarrays for the Detection of Biothreats, edited by K. Dill, R. H. Liu, and P. Grodzinski (Springer, New York, 2009), p. 169.
12. W. Norde, Macromolecular Symposia 103, 5 (1996)10.1002/masy.19961030104.
13. K. Nakanishi, T. Sakiyama, and K. Imamura, J. Biosci. Bioeng. 91, 233 (2001).10.1016/S1389-1723(01)80127-4
14. R. A. Latour"Biomaterials: Protein-surface interactions" in The Encyclopedia of Biomaterials and Bioengineering, 2nd ed., edited by G. E. W. a. G. L. Bowlin (Informa Healthcare, New York, 2008), Vol. 1, pp. 270-284.
15. M. Rabe, D. Verdes, and S. Seeger, Adv. Colloid Interface Sci. 162, 87 (2011).10.1016/j.cis.2010.12.007
16. R. A. Latour, Colloids Surf., B 124, 25 (2014).10.1016/j.colsurfb.2014.06.050
17. T. Horbett, J. L. Brash, and W. Norde, Proteins at Interfaces III State of the Art (American Chemical Society, Washington DC, 2012), Vol. 1120.
18. I. Lynch and K. A. Dawson, Nano Today 3, 40 (2008).10.1016/S1748-0132(08)70014-8
19. J. Benesch, G. Hungerford, K. Suhling, C. Tregidgo, J. F. Mano, and R. L. Reis, J. Colloid Interface Sci. 312, 193 (2007).10.1016/j.jcis.2007.03.016
20. M. Kastantin, B. B. Langdon, and D. K. Schwartz, Adv. Colloid Interface Sci. 207, 240 (2014).10.1016/j.cis.2013.12.006
21. D.-H. Tsai, F. W. DelRio, A. M. Keene, K. M. Tyner, R. I. MacCuspie, T. J. Cho, M. R. Zachariah, and V. A. Hackley, Langmuir 27, 2464 (2011).10.1021/la104124d
22. J. E. Baio, T. Weidner, L. Baugh, L. J. Gamble, P. S. Stayton, and D. G. Castner, Langmuir 28, 2107 (2011).10.1021/la203907t
23. J. S. Apte, G. Collier, R. A. Latour, L. J. Gamble, and D. G. Castner, Langmuir 26, 3423 (2010).10.1021/la902888y
24. T. Weidner and D. G. Castner, Phys. Chem. Chem. Phys. 15, 12516 (2013).10.1039/c3cp50880c
25. G. Goobes et al., Magn. Reson. Chem. 45, S32 (2007).10.1002/mrc.2123
26. A. Roehrich and G. Drobny, Acc. Chem. Res. 46, 2136 (2013).10.1021/ar300321e
27. K. P. Fears, B. Sivaraman, G. L. Powell, Y. Wu, and R. A. Latour, Langmuir 25, 9319 (2009).10.1021/la901885d
28. J. S. Xu and E. F. Bowden, J. Am. Chem. Soc. 128, 6813 (2006).10.1021/ja054219v
29. V. Ovod, E. A. Scott, M. M. Flake, S. R. Parker, R. J. Bateman, and D. L. Elbert, J. Biomed. Mater. Res., Part A 100, 622 (2012).10.1002/jbm.a.33285
30. E. A. Scott and D. L. Elbert, Biomaterials 28, 3904 (2007).10.1016/j.biomaterials.2007.05.022
31. X. Yan, J. Watson, P. S. Ho, and M. L. Deinzer, Mol. Cell. Proteomics 3, 10 (2004).10.1074/mcp.R300010-MCP200
32. P. Roach, D. Farrar, and C. C. Perry, J. Am. Chem. Soc. 127, 8168 (2005).10.1021/ja042898o
33. C. Krishnan"Proteins on surfaces" in Biopolymers at Interfaces, 2nd ed. (CRC, Boca Raton, FL, 2003).
34. G. Chandra, K. S. Ghosh, S. Dasgupta, and A. Roy, Int. J. Biol. Macromol. 47, 361 (2010).10.1016/j.ijbiomac.2010.05.020
35. H. Huang et al., ChemPhysChem 12, 3642 (2011).10.1002/cphc.201100398
36. Y. Wei, A. A. Thyparambil, and R. A. Latour, Colloids Surf., B 110, 363 (2013).10.1016/j.colsurfb.2013.04.018
37. K. P. Fears and R. A. Latour, Langmuir 25, 13926 (2009).10.1021/la900799m
38. B. Sivaraman, K. P. Fears, and R. A. Latour, Langmuir 25, 3050 (2009).10.1021/la8036814
39. B. Sivaraman and R. A. Latour, Biomaterials 32, 5365 (2011).10.1016/j.biomaterials.2011.04.011
40. C. H. Li, X. Nguyen, L. Narhi, L. Chemmalil, E. Towers, S. Muzammil, J. Gabrielson, and Y. Jiang, J. Pharm. Sci. 100, 4642 (2011).10.1002/jps.22695
41. N. Sreerama and R. W. Woody, Anal. Biochem. 287, 252 (2000).10.1006/abio.2000.4880
42. S. M. Kelly, T. J. Jess, and N. C. Price, Biochim. Biophys. Acta 1751, 119 (2005).10.1016/j.bbapap.2005.06.005
43. N. J. Greenfield, Nat. Protoc. 1, 2876 (2006).10.1038/nprot.2006.202
44. C. R. McMillin and A. G. Walton, J. Colloid Interface Sci. 48, 345 (1974).10.1016/0021-9797(74)90170-2
45. O. Arteaga, J. Freudenthal, B. Wang, S. Nichols, and B. Kahr, Chim. Oggi 30, 6 (2012).
46. S. M. Kelly and N. C. Price, Curr. Protein Pept. Sci. 1, 349 (2000).10.2174/1389203003381315
47. M. F. M. Engel, A. Visser, and C. P. M. van Mierlo, Proc. Natl. Acad. Sci. U.S.A. 101, 11316 (2004)10.1073/pnas.0401603101.
48. L. Ronda, S. Bruno, C. Viappiani, S. Abbruzzetti, A. Mozzarelli, K. C. Lowe, and S. Bettati, Protein Sci. 15, 1961 (2006).10.1110/ps.062272306
49. S. Devineau, J.-M. Zanotti, C. Loupiac, L. Zargarian, F. Neiers, S. Pin, and J. P. Renault, Langmuir 29, 13465 (2013).10.1021/la4035479
50. V. L. Mendoza and R. W. Vachet, Mass Spectrom. Rev. 28, 785 (2009).10.1002/mas.20203
51. A. A. Thyparambil, Y. Wei, Y. Wu, and R. A. Latour, Acta Biomater. 10, 2404 (2014).10.1016/j.actbio.2014.01.027
52. Y. Wei, A. A. Thyparambil, Y. Wu, and R. A. Latour, Langmuir 30, 14849 (2014).10.1021/la503854a
53. B. Sivaraman and R. A. Latour, Biomaterials 31, 832 (2010).10.1016/j.biomaterials.2009.10.008
54. D. A. Ladner, M. Steele, A. Weir, K. Hristovski, and P. Westerhoff, J. Hazard. Mater. 211, 288 (2012).10.1016/j.jhazmat.2011.11.051
55. A. A. Thyparambil, Y. Wei, and R. A. Latour, Langmuir 28, 5687 (2012).10.1021/la300315r
56. J. M. DiNitto and J. M. Kenney, Appl. Spectrosc. 66, 180 (2012).10.1366/11-06417
57. P.-F. Liu, L. V. Avramova, and C. Park, Anal. Biochem. 389, 165 (2009).10.1016/j.ab.2009.03.028
58. L. Whitmore, B. Woollett, A. J. Miles, D. P. Klose, R. W. Janes, and B. A. Wallace, Nucleic Acids Res. 39, D480 (2011).10.1093/nar/gkq1026
59. B. A. Wallace, J. G. Lees, A. J. W. Orry, A. Lobley, and R. W. Janes, Protein Sci. 12, 875 (2003).10.1110/ps.0229603
60. A. Abdul-Gader, A. J. Miles, and B. Wallace, Bioinformatics 27, 1630 (2011).10.1093/bioinformatics/btr234
61. L. Whitmore and B. Wallace, Nucleic Acids Res. 32, W668 (2004).10.1093/nar/gkh371
62. L. Whitmore and B. A. Wallace, Biopolymers 89, 392 (2008).10.1002/bip.20853
63. J. G. Lees, A. J. Miles, F. Wien, and B. Wallace, Bioinformatics 22, 1955 (2006).10.1093/bioinformatics/btl327
64. Y. Wei, A. A. Thyparambil, and R. A. Latour, Biochim. Biophys. Acta 1844, 2331 (2014).10.1016/j.bbapap.2014.10.001
65. M. W. Duncan, R. Aebersold, and R. M. Caprioli, Nat. Biotechnol. 28, 659 (2010).10.1038/nbt0710-659
66. Y. Iwasaki, Y. Nakano, K. Mochizuki, M. Nomoto, Y. Takahashi, R. Ito, K. Saito, and H. Nakazawa, J. Chromatogr. B 879, 1159 (2011).10.1016/j.jchromb.2011.02.008
67. M. R. Wilkins, I. Lindskog, E. Gasteiger, A. Bairoch, J.-C. Sanchez, D. F. Hochstrasser, and R. D. Appel, Electrophoresis 18, 403 (1997).10.1002/elps.1150180314
68. H. M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T. N. Bhat, H. Weissig, I. N. Shindyalov, and P. E. Bourne, Nucleic Acids Res. 28, 235 (2000).10.1093/nar/28.1.235
69. R. L. Lundblad"The chemical cleavage of peptide bonds" in Chemical Reagents for Protein Modification, 3rd ed. (CRC, Boca Raton, FL, 2004).
70. M. C. Vaney, S. Maignan, M. Ries-Kautt, and A. Ducriux, Acta Crystallogr., Sect. D: Biol. Crystallogr. 52, 505 (1996).10.1107/S090744499501674X
71. D. J. Vocadlo, G. J. Davies, R. Laine, and S. G. Withers, Nature 412, 835 (2001).10.1038/35090602
72. R. L. Lundblad"The modification of histidine residues" in Chemical Reagents for Protein Modification, 3rd ed. (CRC, Boca Raton, FL, 2004).
73. E. F. Pettersen, T. D. Goddard, C. C. Huang, G. S. Couch, D. M. Greenblatt, E. C. Meng, and T. E. Ferrin, J. Comput. Chem. 25, 1605 (2004).10.1002/jcc.20084
74. A. A. Vertegel, R. W. Siegel, and J. S. Dordick, Langmuir 20, 6800 (2004).10.1021/la0497200
75. X. Wu and G. Narsimhan, Biochim. Biophys. Acta 1784, 1694 (2008).10.1016/j.bbapap.2008.06.008
76. M. van der Veen, M. C. Stuart, and W. Norde, Colloids Surf., B 54, 136 (2007).10.1016/j.colsurfb.2006.08.017
77. K. Kubiak-Ossowska and P. A. Mulheran, Langmuir 26, 15954 (2010).10.1021/la102960m
78. D. T. Kim, H. W. Blanch, and C. J. Radke, Langmuir 18, 5841 (2002).10.1021/la0256331