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Volumn 53, Issue 11, 2015, Pages 3530-3538

Is Shiga toxin-negative Escherichia coli O157:H7 enteropathogenic or enterohemorrhagic Escherichia coli? comprehensive molecular analysis using whole-genome sequencing

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL GENE; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIAL TRANSMISSION; BACTERIAL VIRULENCE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; CONTROLLED STUDY; EAE GENE; ENTEROHEMORRHAGIC ESCHERICHIA COLI; ENTEROPATHOGENIC ESCHERICHIA COLI; ESCHERICHIA COLI O157; ESPP GENE; GENOME ANALYSIS; HUMAN; MOLECULAR TYPING; NONHUMAN; PATHOGENICITY ISLAND; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; SHIGA TOXIN PRODUCING ESCHERICHIA COLI; STX GENE; TCCP GENE; TYPE II SECRETION SYSTEM; BACTERIOPHAGE; DEFICIENCY; ESCHERICHIA COLI INFECTION; FECES; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; NETHERLANDS; PATHOGENICITY;

EID: 84945186977     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.01899-15     Document Type: Article
Times cited : (46)

References (42)
  • 2
    • 75849118571 scopus 로고    scopus 로고
    • A brief overview of Escherichia coli O157:H7 and its plasmid O157
    • Lim JY, Yoon J, Hovde CJ. 2010. A brief overview of Escherichia coli O157:H7 and its plasmid O157. J Microbiol Biotechnol 20:5-14.
    • (2010) J Microbiol Biotechnol , vol.20 , pp. 5-14
    • Lim, J.Y.1    Yoon, J.2    Hovde, C.J.3
  • 4
    • 0034068956 scopus 로고    scopus 로고
    • Virulence factors of Escherichia coli O157 and other Shiga toxin-producing E coli
    • Law D. 2000. Virulence factors of Escherichia coli O157 and other Shiga toxin-producing E. coli. J Appl Microbiol 88:729-745. http://dx.doi.org/10.1046/j.1365-2672.2000.01031.x.
    • (2000) J Appl Microbiol , vol.88 , pp. 729-745
    • Law, D.1
  • 5
    • 0023128113 scopus 로고
    • Escherichia coli that cause diarrhea: Enterotoxigenic, enteropathogenic, enteroinvasive, enterohemorrhagic, and enteroadher-ent
    • Levine MM. 1987. Escherichia coli that cause diarrhea: enterotoxigenic, enteropathogenic, enteroinvasive, enterohemorrhagic, and enteroadher-ent. J Infect Dis 155:377-389. http://dx.doi.org/10.1093/infdis/155.3.377.
    • (1987) J Infect Dis , vol.155 , pp. 377-389
    • Levine, M.M.1
  • 6
    • 0034813874 scopus 로고    scopus 로고
    • Shiga-toxin-converting bacteriophages
    • Schmidt H. 2001. Shiga-toxin-converting bacteriophages. Res Microbiol 152:687-695. http://dx.doi.org/10.1016/S0923-2508(01)01249-9.
    • (2001) Res Microbiol , vol.152 , pp. 687-695
    • Schmidt, H.1
  • 7
    • 0037069746 scopus 로고    scopus 로고
    • The Shiga-toxin VT2-encoding bacteriophage varphi297 integrates at a distinct position in the Escherichia coli genome
    • De Greve H, Qizhi C, Deboeck F, Hernalsteens JP. 2002. The Shiga-toxin VT2-encoding bacteriophage varphi297 integrates at a distinct position in the Escherichia coli genome. Biochim Biophys Acta 1579:196-202. http://dx.doi.org/10.1016/S0167-4781(02)00539-0.
    • (2002) Biochim Biophys Acta , vol.1579 , pp. 196-202
    • De Greve, H.1    Qizhi, C.2    Deboeck, F.3    Hernalsteens, J.P.4
  • 8
    • 0043267536 scopus 로고    scopus 로고
    • Shiga toxin 2-converting bacteriophages associated with clonal variability in Escherichia coli O157:H7 strains of human origin isolated from a single outbreak
    • Muniesa M, de Simon M, Prats G, Ferrer D, Pañella H, Jofre J. 2003. Shiga toxin 2-converting bacteriophages associated with clonal variability in Escherichia coli O157:H7 strains of human origin isolated from a single outbreak. Infect Immun 71:4554-4562. http://dx.doi.org/10.1128/IAI.71.8.4554-4562.2003.
    • (2003) Infect Immun , vol.71 , pp. 4554-4562
    • Muniesa, M.1    De Simon, M.2    Prats, G.3    Ferrer, D.4    Pañella, H.5    Jofre, J.6
  • 9
    • 33644932927 scopus 로고    scopus 로고
    • Chromosomal dynamism in progeny of outbreak-related sorbitol-fermenting enterohemorrhagic Escherichia coli O157:NM
    • Bielaszewska M, Prager R, Zhang W, Friedrich AW, Mellmann A, Tschäpe H, Karch H. 2006. Chromosomal dynamism in progeny of outbreak-related sorbitol-fermenting enterohemorrhagic Escherichia coli O157:NM. Appl Environ Microbiol 72:1900-1909. http://dx.doi.org/10.1128/AEM.72.3.1900-1909.2006.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 1900-1909
    • Bielaszewska, M.1    Prager, R.2    Zhang, W.3    Friedrich, A.W.4    Mellmann, A.5    Tschäpe, H.6    Karch, H.7
  • 10
    • 34548595387 scopus 로고    scopus 로고
    • Insertion site occupancy by stx2 bacteriophages depends on the locus availability of the host strain chromosome
    • Serra-Moreno R, Jofre J, Muniesa M. 2007. Insertion site occupancy by stx2 bacteriophages depends on the locus availability of the host strain chromosome. J Bacteriol 189:6645-6654. http://dx.doi.org/10.1128/JB.00466-07.
    • (2007) J Bacteriol , vol.189 , pp. 6645-6654
    • Serra-Moreno, R.1    Jofre, J.2    Muniesa, M.3
  • 11
    • 84871156178 scopus 로고    scopus 로고
    • Carriage of stx2a differentiates clinical and bovine-biased strains of Escherichia coli O157
    • Shringi S, Schmidt C, Katherine K, Brayton KA, Hancock DD, Besser TE. 2012. Carriage of stx2a differentiates clinical and bovine-biased strains of Escherichia coli O157. PLoS One 7:e51572. http://dx.doi.org/10.1371/journal.pone.0051572.
    • (2012) PLoS One , vol.7 , pp. e51572
    • Shringi, S.1    Schmidt, C.2    Katherine, K.3    Brayton, K.A.4    Hancock, D.D.5    Besser, T.E.6
  • 14
    • 0037608958 scopus 로고    scopus 로고
    • Escherichia coli O157:H7 Shiga toxin-encoding bacteriophages: Integrations, excisions, truncations, and evolutionary implications
    • Shaikh N, Tarr PI. 2003. Escherichia coli O157:H7 Shiga toxin-encoding bacteriophages: integrations, excisions, truncations, and evolutionary implications. J Bacteriol 185:3596-3605. http://dx.doi.org/10.1128/JB.185.12.3596-3605.2003.
    • (2003) J Bacteriol , vol.185 , pp. 3596-3605
    • Shaikh, N.1    Tarr, P.I.2
  • 16
    • 33748546286 scopus 로고    scopus 로고
    • Typing of intimin (eae) genes from enteropathogenic Escherichia coli (EPEC) isolated from children with diarrhoea in Montevideo, Uruguay: Identification of two novel intimin variants (muB and xiR/beta2B)
    • Blanco M, Blanco JE, Dahbi G, Mora A, Alonso MP, Varela G, Gadea MP, Schelotto F, González EA, Blanco J. 2006. Typing of intimin (eae) genes from enteropathogenic Escherichia coli (EPEC) isolated from children with diarrhoea in Montevideo, Uruguay: identification of two novel intimin variants (muB and xiR/beta2B). J Med Microbiol 55:1165-1174. http://dx.doi.org/10.1099/jmm.0.46518-0.
    • (2006) J Med Microbiol , vol.55 , pp. 1165-1174
    • Blanco, M.1    Blanco, J.E.2    Dahbi, G.3    Mora, A.4    Alonso, M.P.5    Varela, G.6    Gadea, M.P.7    Schelotto, F.8    González, E.A.9    Blanco, J.10
  • 19
    • 46349109910 scopus 로고    scopus 로고
    • Shiga toxin-negative attaching and effacing Escherichia coli: Distinct clinical associations with bacterial phy-logeny and virulence traits and inferred in-host pathogen evolution
    • Bielaszewska M, Middendorf B, Köck R, Friedrich AW, Fruth A, Karch H, Schmidt MA, Mellmann A. 2008. Shiga toxin-negative attaching and effacing Escherichia coli: distinct clinical associations with bacterial phy-logeny and virulence traits and inferred in-host pathogen evolution. Clin Infect Dis 47:208-217. http://dx.doi.org/10.1086/589245.
    • (2008) Clin Infect Dis , vol.47 , pp. 208-217
    • Bielaszewska, M.1    Middendorf, B.2    Köck, R.3    Friedrich, A.W.4    Fruth, A.5    Karch, H.6    Schmidt, M.A.7    Mellmann, A.8
  • 20
    • 34250807060 scopus 로고    scopus 로고
    • Prevalence, virulence profiles, and clinical significance of Shiga toxin-negative variants of enterohemorrhagic Esch-erichia coli O157 infection in humans
    • Friedrich AW, Zhang W, Bielaszewska M, Mellmann A, Köck R, Fruth A, Tschäpe H, Karch H. 2007. Prevalence, virulence profiles, and clinical significance of Shiga toxin-negative variants of enterohemorrhagic Esch-erichia coli O157 infection in humans. Clin Infect Dis 45:39-45. http://dx.doi.org/10.1086/518573.
    • (2007) Clin Infect Dis , vol.45 , pp. 39-45
    • Friedrich, A.W.1    Zhang, W.2    Bielaszewska, M.3    Mellmann, A.4    Köck, R.5    Fruth, A.6    Tschäpe, H.7    Karch, H.8
  • 22
    • 84928036907 scopus 로고    scopus 로고
    • Assessing the public health risk of Shiga toxin-producing Escherichia coli byuseof a rapid diagnostic screening algorithm
    • de Boer RF, Ferdous M, Ott A, Scheper HR, Wisselink GJ, Heck ME, Rossen JW, Kooistra-Smid AM. 2015. Assessing the public health risk of Shiga toxin-producing Escherichia coli byuseof a rapid diagnostic screening algorithm. J Clin Microbiol 53:1588-1598. http://dx.doi.org/10.1128/JCM.03590-14.
    • (2015) J Clin Microbiol , vol.53 , pp. 1588-1598
    • De Boer, R.F.1    Ferdous, M.2    Ott, A.3    Scheper, H.R.4    Wisselink, G.J.5    Heck, M.E.6    Rossen, J.W.7    Kooistra-Smid, A.M.8
  • 23
    • 2342579395 scopus 로고    scopus 로고
    • Detection by 5=-nuclease PCR of Shiga-toxin producing Escherichia coli O26, O55, O91, O103, O111, O113, O145 and O157:H7, associated with the world's most frequent clinical cases
    • Perelle S, Dilasser F, Grout J, Fach P. 2004. Detection by 5=-nuclease PCR of Shiga-toxin producing Escherichia coli O26, O55, O91, O103, O111, O113, O145 and O157:H7, associated with the world's most frequent clinical cases. Mol Cell Probes 18:185-192. http://dx.doi.org/10.1016/j.mcp.2003.12.004.
    • (2004) Mol Cell Probes , vol.18 , pp. 185-192
    • Perelle, S.1    Dilasser, F.2    Grout, J.3    Fach, P.4
  • 26
    • 84899573966 scopus 로고    scopus 로고
    • Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Esche-richia coli
    • Joensen KG, Scheutz F, Lund O, Hasman H, Kaas RS, Nielsen EM, Aarestrup FM. 2014. Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Esche-richia coli. J Clin Microbiol 52:1501-1510. http://dx.doi.org/10.1128/JCM.03617-13.
    • (2014) J Clin Microbiol , vol.52 , pp. 1501-1510
    • Joensen, K.G.1    Scheutz, F.2    Lund, O.3    Hasman, H.4    Kaas, R.S.5    Nielsen, E.M.6    Aarestrup, F.M.7
  • 27
    • 84938071260 scopus 로고    scopus 로고
    • Rapid and easy in silico serotyping of Escherichia coli by use of whole-genome sequencing data
    • Joensen KG, Tetzschner AM, Iguchi A, Aarestrup FM, Scheutz F. 2015. Rapid and easy in silico serotyping of Escherichia coli by use of whole-genome sequencing data. J Clin Microbiol 53:2410-2426. http://dx.doi.org/10.1128/JCM.00008-15.
    • (2015) J Clin Microbiol , vol.53 , pp. 2410-2426
    • Joensen, K.G.1    Tetzschner, A.M.2    Iguchi, A.3    Aarestrup, F.M.4    Scheutz, F.5
  • 28
    • 79961109150 scopus 로고    scopus 로고
    • BLAST Ring Image Generator (BRIG): Simple prokaryote genome comparisons
    • Alikhan NF, Petty NK, Ben Zakour NL, Beatson SA. 2011. BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons. BMC Genomics 12:402. http://dx.doi.org/10.1186/1471-2164-12-402.
    • (2011) BMC Genomics , vol.12 , pp. 402
    • Alikhan, N.F.1    Petty, N.K.2    Ben Zakour, N.L.3    Beatson, S.A.4
  • 29
    • 13844256141 scopus 로고    scopus 로고
    • Distribution of the urease gene cluster among and urease activities of enterohemorrhagic Escherichia coli O157 isolates from humans
    • Friedrich AW, Köck R, Bielaszewska M, Zhang W, Karch H, Mathys W. 2005. Distribution of the urease gene cluster among and urease activities of enterohemorrhagic Escherichia coli O157 isolates from humans. J Clin Microbiol 43:546-550. http://dx.doi.org/10.1128/JCM.43.2.546-550.2005.
    • (2005) J Clin Microbiol , vol.43 , pp. 546-550
    • Friedrich, A.W.1    Köck, R.2    Bielaszewska, M.3    Zhang, W.4    Karch, H.5    Mathys, W.6
  • 31
    • 84903782426 scopus 로고    scopus 로고
    • Bacterial whole-genome sequencing revisited: Portable, scalable, and standardized analysis for typing and detection of virulence and antibiotic resistance genes
    • Leopold SR, Goering RV, Witten A, Harmsen D, Mellmann A. 2014. Bacterial whole-genome sequencing revisited: portable, scalable, and standardized analysis for typing and detection of virulence and antibiotic resistance genes. J Clin Microbiol 52:2365-2370. http://dx.doi.org/10.1128/JCM.00262-14.
    • (2014) J Clin Microbiol , vol.52 , pp. 2365-2370
    • Leopold, S.R.1    Goering, R.V.2    Witten, A.3    Harmsen, D.4    Mellmann, A.5
  • 33
    • 85007441148 scopus 로고    scopus 로고
    • Complete genome sequence of SS52, a strain of Escherichia coli O157:H7 recovered from supershedder cattle
    • Katani R, Cote R, Raygoza Garay JA, Li L, Arthur TM, DebRoy C, Mwangi MM, Kapur V. 2015. Complete genome sequence of SS52, a strain of Escherichia coli O157:H7 recovered from supershedder cattle. Genome Announc 3:e01569-14. http://dx.doi.org/10.1128/genomeA.01569-14.
    • (2015) Genome Announc , vol.3 , pp. e01569-e01614
    • Katani, R.1    Cote, R.2    Raygoza Garay, J.A.3    Li, L.4    Arthur, T.M.5    DebRoy, C.6    Mwangi, M.M.7    Kapur, V.8
  • 34
    • 84864329512 scopus 로고    scopus 로고
    • Factors influencing the microbial safety of fresh produce: A review
    • Olaimat AN, Holley RA. 2012. Factors influencing the microbial safety of fresh produce: a review. Food Microbiol 32:1-19. http://dx.doi.org/10.1016/j.fm.2012.04.016.
    • (2012) Food Microbiol , vol.32 , pp. 1-19
    • Olaimat, A.N.1    Holley, R.A.2
  • 37
    • 1842558989 scopus 로고    scopus 로고
    • A 12-base-pair deletion in the flagellar master control gene flhC causes nonmotility of the pathogenic German sorbitol-fermenting Escherichia coli O157:H-strains
    • Monday SR, Minnich SA, Feng PC. 2004. A 12-base-pair deletion in the flagellar master control gene flhC causes nonmotility of the pathogenic German sorbitol-fermenting Escherichia coli O157:H-strains. J Bacteriol 186: 2319-2327. http://dx.doi.org/10.1128/JB.186.8.2319-2327.2004.
    • (2004) J Bacteriol , vol.186 , pp. 2319-2327
    • Monday, S.R.1    Minnich, S.A.2    Feng, P.C.3
  • 38
    • 0034973451 scopus 로고    scopus 로고
    • Isogenic strain of Escherichia coli O157:H7 that has lost both Shiga toxin 1 and 2 genes
    • Feng P, Dey M, Abe A, Takeda T. 2001. Isogenic strain of Escherichia coli O157:H7 that has lost both Shiga toxin 1 and 2 genes. Clin Diagn Lab Immunol 8:711-717.
    • (2001) Clin Diagn Lab Immunol , vol.8 , pp. 711-717
    • Feng, P.1    Dey, M.2    Abe, A.3    Takeda, T.4
  • 39
    • 0035008965 scopus 로고    scopus 로고
    • Sorbitol-fermenting Shiga toxin-producing Escherichia coli O157:H(-) strains: Epidemiology, phenotypic and molecular characteristics, and microbiological diagnosis
    • Karch H, Bielaszewska M. 2001. Sorbitol-fermenting Shiga toxin-producing Escherichia coli O157:H(-) strains: epidemiology, phenotypic and molecular characteristics, and microbiological diagnosis. J Clin Microbiol 39:2043-2049. http://dx.doi.org/10.1128/JCM.39.6.2043-2049.2001.
    • (2001) J Clin Microbiol , vol.39 , pp. 2043-2049
    • Karch, H.1    Bielaszewska, M.2


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