메뉴 건너뛰기




Volumn 160, Issue , 2014, Pages 2681-2693

Fis overexpression enhances Pseudomonas putida biofilm formation by regulating the ratio of LapA and LapF

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; FACTOR FOR INVERSION STIMULATION; HYBRID PROTEIN; PROTEIN LAPA; PROTEIN LAPF; UNCLASSIFIED DRUG; TRANSPOSON;

EID: 84944171243     PISSN: 13500872     EISSN: 14652080     Source Type: Journal    
DOI: 10.1099/mic.0.082503-0     Document Type: Article
Times cited : (19)

References (79)
  • 1
    • 0004078614 scopus 로고
    • New York: Interscience Publishers
    • Adams, M. H. (1959). Bacteriophages. New York: Interscience Publishers.
    • (1959) Bacteriophages
    • Adams, M.H.1
  • 2
    • 0032716841 scopus 로고    scopus 로고
    • Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
    • Ali Azam, T., Iwata, A., Nishimura, A., Ueda, S. & Ishihama, A. (1999). Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid. J Bacteriol 181, 6361-6370.
    • (1999) J Bacteriol , vol.181 , pp. 6361-6370
    • Ali Azam, T.1    Iwata, A.2    Nishimura, A.3    Ueda, S.4    Ishihama, A.5
  • 4
    • 0032731196 scopus 로고    scopus 로고
    • Twelve species of the nucleoidassociated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity
    • Azam, T. A. & Ishihama, A. (1999). Twelve species of the nucleoidassociated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity. J Biol Chem 274, 33105-33113.
    • (1999) J Biol Chem , vol.274 , pp. 33105-33113
    • Azam, T.A.1    Ishihama, A.2
  • 6
    • 0031733414 scopus 로고    scopus 로고
    • Identification and characterization of the fis operon in enteric bacteria
    • Beach, M. B. & Osuna, R. (1998). Identification and characterization of the fis operon in enteric bacteria. J Bacteriol 180, 5932-5946.
    • (1998) J Bacteriol , vol.180 , pp. 5932-5946
    • Beach, M.B.1    Osuna, R.2
  • 7
    • 1542357649 scopus 로고    scopus 로고
    • Variable contributions of tyrosine residues to the structural and spectroscopic properties of the factor for inversion stimulation
    • Boswell, S., Mathew, J., Beach, M., Osuna, R. & Colón, W. (2004). Variable contributions of tyrosine residues to the structural and spectroscopic properties of the factor for inversion stimulation. Biochemistry 43, 2964-2977.
    • (2004) Biochemistry , vol.43 , pp. 2964-2977
    • Boswell, S.1    Mathew, J.2    Beach, M.3    Osuna, R.4    Colón, W.5
  • 8
    • 84903886968 scopus 로고    scopus 로고
    • Structural features of the Pseudomonas fluorescens biofilm adhesin LapA required for LapG-dependent cleavage, biofilm formation, and cell surface localization
    • Boyd, C. D., Smith, T. J., El-Kirat-Chatel, S., Newell, P. D., Dufrêne, Y. F. & O'Toole, G. A. (2014). Structural features of the Pseudomonas fluorescens biofilm adhesin LapA required for LapG-dependent cleavage, biofilm formation, and cell surface localization. J Bacteriol 196, 2775-2788.
    • (2014) J Bacteriol , vol.196 , pp. 2775-2788
    • Boyd, C.D.1    Smith, T.J.2    El-Kirat-Chatel, S.3    Newell, P.D.4    Dufrêne, Y.F.5    O'Toole, G.A.6
  • 9
    • 0014674485 scopus 로고
    • A complementation analysis of the restriction and modification of DNA in Escherichia coli
    • Boyer, H. W. & Roulland-Dussoix, D. (1969). A complementation analysis of the restriction and modification of DNA in Escherichia coli. J Mol Biol 41, 459-472.
    • (1969) J Mol Biol , vol.41 , pp. 459-472
    • Boyer, H.W.1    Roulland-Dussoix, D.2
  • 10
    • 34948885665 scopus 로고    scopus 로고
    • Effects of Fis on Escherichia coli gene expression during different growth stages
    • Bradley, M. D., Beach, M. B., de Koning, A. P., Pratt, T. S. & Osuna, R. (2007). Effects of Fis on Escherichia coli gene expression during different growth stages. Microbiology 153, 2922-2940.
    • (2007) Microbiology , vol.153 , pp. 2922-2940
    • Bradley, M.D.1    Beach, M.B.2    de Koning, A.P.3    Pratt, T.S.4    Osuna, R.5
  • 11
    • 0022432255 scopus 로고
    • Improved oligonucleotide site-directed mutagenesis using M13 vectors
    • Carter, P., Bedouelle, H. & Winter, G. (1985). Improved oligonucleotide site-directed mutagenesis using M13 vectors. Nucleic Acids Res 13, 4431-4443.
    • (1985) Nucleic Acids Res , vol.13 , pp. 4431-4443
    • Carter, P.1    Bedouelle, H.2    Winter, G.3
  • 12
    • 36549035342 scopus 로고    scopus 로고
    • Alginate production by Pseudomonas putida creates a hydrated microenvironment and contributes to biofilm architecture and stress tolerance under water-limiting conditions
    • Chang, W. S., van de Mortel, M., Nielsen, L., Nino de Guzman, G., Li, X. & Halverson, L. J. (2007). Alginate production by Pseudomonas putida creates a hydrated microenvironment and contributes to biofilm architecture and stress tolerance under water-limiting conditions. J Bacteriol 189, 8290-8299.
    • (2007) J Bacteriol , vol.189 , pp. 8290-8299
    • Chang, W.S.1    van de Mortel, M.2    Nielsen, L.3    Nino de Guzman, G.4    Li, X.5    Halverson, L.J.6
  • 14
    • 34248638739 scopus 로고    scopus 로고
    • Silver staining of proteins in polyacrylamide gels
    • Chevallet, M., Luche, S. & Rabilloud, T. (2006). Silver staining of proteins in polyacrylamide gels. Nat Protoc 1, 1852-1858.
    • (2006) Nat Protoc , vol.1 , pp. 1852-1858
    • Chevallet, M.1    Luche, S.2    Rabilloud, T.3
  • 15
    • 0030793821 scopus 로고    scopus 로고
    • Aggregative adherence fimbria II, a second fimbrial antigen mediating aggregative adherence in enteroaggregative Escherichia coli
    • Czeczulin, J. R., Balepur, S., Hicks, S., Phillips, A., Hall, R., Kothary, M. H., Navarro-Garcia, F. & Nataro, J. P. (1997). Aggregative adherence fimbria II, a second fimbrial antigen mediating aggregative adherence in enteroaggregative Escherichia coli. Infect Immun 65, 4135-4145.
    • (1997) Infect Immun , vol.65 , pp. 4135-4145
    • Czeczulin, J.R.1    Balepur, S.2    Hicks, S.3    Phillips, A.4    Hall, R.5    Kothary, M.H.6    Navarro-Garcia, F.7    Nataro, J.P.8
  • 16
    • 35348825386 scopus 로고    scopus 로고
    • Biofilm formation by plantassociated bacteria
    • Danhorn, T. & Fuqua, C. (2007). Biofilm formation by plantassociated bacteria. Annu Rev Microbiol 61, 401-422.
    • (2007) Annu Rev Microbiol , vol.61 , pp. 401-422
    • Danhorn, T.1    Fuqua, C.2
  • 17
    • 0027385020 scopus 로고
    • Early and late responses of TOL promoters to pathway inducers: Identification of postexponential promoters in Pseudomonas putida with lacZ-tet bicistronic reporters
    • de Lorenzo, V., Cases, I., Herrero, M. & Timmis, K. N. (1993). Early and late responses of TOL promoters to pathway inducers: identification of postexponential promoters in Pseudomonas putida with lacZ-tet bicistronic reporters. J Bacteriol 175, 6902-6907.
    • (1993) J Bacteriol , vol.175 , pp. 6902-6907
    • de Lorenzo, V.1    Cases, I.2    Herrero, M.3    Timmis, K.N.4
  • 18
    • 0027461549 scopus 로고
    • Xis and Fis proteins prevent site-specific DNA inversion in lysogens of phage HK022
    • Dorgai, L., Oberto, J. & Weisberg, R. A. (1993). Xis and Fis proteins prevent site-specific DNA inversion in lysogens of phage HK022. J Bacteriol 175, 693-700.
    • (1993) J Bacteriol , vol.175 , pp. 693-700
    • Dorgai, L.1    Oberto, J.2    Weisberg, R.A.3
  • 20
    • 0034005123 scopus 로고    scopus 로고
    • Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds
    • Espinosa-Urgel, M., Salido, A. & Ramos, J. L. (2000). Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds. J Bacteriol 182, 2363-2369.
    • (2000) J Bacteriol , vol.182 , pp. 2363-2369
    • Espinosa-Urgel, M.1    Salido, A.2    Ramos, J.L.3
  • 21
    • 0000527903 scopus 로고
    • Replication of an origincontaining derivative of plasmid RK2 dependent on a plasmid function provided in trans
    • Figurski, D. H. & Helinski, D. R. (1979). Replication of an origincontaining derivative of plasmid RK2 dependent on a plasmid function provided in trans. Proc Natl Acad Sci U S A 76, 1648-1652.
    • (1979) Proc Natl Acad Sci U S A , vol.76 , pp. 1648-1652
    • Figurski, D.H.1    Helinski, D.R.2
  • 22
    • 0026470852 scopus 로고
    • The Fis protein: It's not just for DNA inversion anymore
    • Finkel, S. E. & Johnson, R. C. (1992). The Fis protein: it's not just for DNA inversion anymore. Mol Microbiol 6, 3257-3265.
    • (1992) Mol Microbiol , vol.6 , pp. 3257-3265
    • Finkel, S.E.1    Johnson, R.C.2
  • 23
    • 0017576912 scopus 로고
    • The effects of culture concentration and age, time and temperature on bacterial attachments to polystyrene
    • Fletcher, A. (1977). The effects of culture concentration and age, time and temperature on bacterial attachments to polystyrene. Can J Microbiol 23, 1-6.
    • (1977) Can J Microbiol , vol.23 , pp. 1-6
    • Fletcher, A.1
  • 24
    • 77954835737 scopus 로고    scopus 로고
    • Passing the baton between laps: Adhesion and cohesion in Pseudomonas putida biofilms
    • Fuqua, C. (2010). Passing the baton between laps: adhesion and cohesion in Pseudomonas putida biofilms. Mol Microbiol 77, 533-536.
    • (2010) Mol Microbiol , vol.77 , pp. 533-536
    • Fuqua, C.1
  • 25
    • 76449086560 scopus 로고    scopus 로고
    • Characterization of starvation-induced dispersion in Pseudomonas putida biofilms: Genetic elements and molecular mechanisms
    • Gjermansen, M., Nilsson, M., Yang, L. & Tolker-Nielsen, T. (2010). Characterization of starvation-induced dispersion in Pseudomonas putida biofilms: genetic elements and molecular mechanisms. Mol Microbiol 75, 815-826.
    • (2010) Mol Microbiol , vol.75 , pp. 815-826
    • Gjermansen, M.1    Nilsson, M.2    Yang, L.3    Tolker-Nielsen, T.4
  • 26
    • 0029844676 scopus 로고    scopus 로고
    • FIS is a regulator of metabolism in Escherichia coli
    • González-Gil, G., Bringmann, P. & Kahmann, R. (1996). FIS is a regulator of metabolism in Escherichia coli. Mol Microbiol 22, 21-29.
    • (1996) Mol Microbiol , vol.22 , pp. 21-29
    • González-Gil, G.1    Bringmann, P.2    Kahmann, R.3
  • 27
    • 0025047590 scopus 로고
    • Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gramnegative bacteria
    • Herrero, M., de Lorenzo, V. & Timmis, K. N. (1990). Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gramnegative bacteria. J Bacteriol 172, 6557-6567.
    • (1990) J Bacteriol , vol.172 , pp. 6557-6567
    • Herrero, M.1    de Lorenzo, V.2    Timmis, K.N.3
  • 28
    • 33646795317 scopus 로고    scopus 로고
    • Biofilmformation by Pseudomonas fluorescens WCS365: A role for LapD
    • Hinsa, S. M. & O'Toole,G. A. (2006). Biofilmformation by Pseudomonas fluorescens WCS365: a role for LapD. Microbiology 152, 1375-1383.
    • (2006) Microbiology , vol.152 , pp. 1375-1383
    • Hinsa, S.M.1    O'Toole, G.A.2
  • 29
    • 0042065283 scopus 로고    scopus 로고
    • Transition from reversible to irreversible attachment during biofilm formation by Pseudomonas fluorescens WCS365 requires an ABC transporter and a large secreted protein
    • Hinsa, S. M., Espinosa-Urgel, M., Ramos, J. L. & O'Toole, G. A. (2003). Transition from reversible to irreversible attachment during biofilm formation by Pseudomonas fluorescens WCS365 requires an ABC transporter and a large secreted protein. Mol Microbiol 49, 905-918.
    • (2003) Mol Microbiol , vol.49 , pp. 905-918
    • Hinsa, S.M.1    Espinosa-Urgel, M.2    Ramos, J.L.3    O'Toole, G.A.4
  • 30
    • 0024556150 scopus 로고
    • Engineering hybrid genes without the use of restriction enzymes: Gene splicing by overlap extension
    • Horton, R. M., Hunt, H. D., Ho, S. N., Pullen, J. K. & Pease, L. R. (1989). Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension. Gene 77, 61-68.
    • (1989) Gene , vol.77 , pp. 61-68
    • Horton, R.M.1    Hunt, H.D.2    Ho, S.N.3    Pullen, J.K.4    Pease, L.R.5
  • 31
    • 84857725508 scopus 로고    scopus 로고
    • Fis regulates the competitiveness of Pseudomonas putida on barley roots by inducing biofilm formation
    • Jakovleva, J., Teppo, A., Velts, A., Saumaa, S., Moor, H., Kivisaar, M. & Teras, R. (2012). Fis regulates the competitiveness of Pseudomonas putida on barley roots by inducing biofilm formation. Microbiology 158, 708-720.
    • (2012) Microbiology , vol.158 , pp. 708-720
    • Jakovleva, J.1    Teppo, A.2    Velts, A.3    Saumaa, S.4    Moor, H.5    Kivisaar, M.6    Teras, R.7
  • 32
    • 84866171028 scopus 로고    scopus 로고
    • One-step sequence- and ligation-independent cloning as a rapid and versatile cloning method for functional genomics studies
    • Jeong, J. Y., Yim, H. S., Ryu, J. Y., Lee, H. S., Lee, J. H., Seen, D. S. & Kang, S. G. (2012). One-step sequence- and ligation-independent cloning as a rapid and versatile cloning method for functional genomics studies. Appl Environ Microbiol 78, 5440-5443.
    • (2012) Appl Environ Microbiol , vol.78 , pp. 5440-5443
    • Jeong, J.Y.1    Yim, H.S.2    Ryu, J.Y.3    Lee, H.S.4    Lee, J.H.5    Seen, D.S.6    Kang, S.G.7
  • 33
    • 0022545522 scopus 로고
    • Host protein requirements for in vitro site-specific DNA inversion
    • Johnson, R. C., Bruist, M. F. & Simon, M. I. (1986). Host protein requirements for in vitro site-specific DNA inversion. Cell 46, 531- 539.
    • (1986) Cell , vol.46 , pp. 531-539
    • Johnson, R.C.1    Bruist, M.F.2    Simon, M.I.3
  • 34
    • 43349086724 scopus 로고
    • Two simple media for the demonstration of pyocyanin and fluorescin
    • King, E. O., Ward, M. K. & Raney, D. E. (1954). Two simple media for the demonstration of pyocyanin and fluorescin. J Lab Clin Med 44, 301-307.
    • (1954) J Lab Clin Med , vol.44 , pp. 301-307
    • King, E.O.1    Ward, M.K.2    Raney, D.E.3
  • 35
    • 13244256910 scopus 로고    scopus 로고
    • Reduction of the fitness burden of quinolone resistance in Pseudomonas aeruginosa
    • Kugelberg, E., Löfmark, S., Wretlind, B. & Andersson, D. I. (2005). Reduction of the fitness burden of quinolone resistance in Pseudomonas aeruginosa. J Antimicrob Chemother 55, 22-30.
    • (2005) J Antimicrob Chemother , vol.55 , pp. 22-30
    • Kugelberg, E.1    Löfmark, S.2    Wretlind, B.3    Andersson, D.I.4
  • 36
    • 73449097174 scopus 로고    scopus 로고
    • Gene doctoring: A method for recombineering in laboratory and pathogenic Escherichia coli strains
    • Lee, D. J., Bingle, L. E., Heurlier, K., Pallen, M. J., Penn, C. W., Busby, S. J. & Hobman, J. L. (2009). Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains. BMC Microbiol 9, 252.
    • (2009) BMC Microbiol , vol.9 , pp. 252
    • Lee, D.J.1    Bingle, L.E.2    Heurlier, K.3    Pallen, M.J.4    Penn, C.W.5    Busby, S.J.6    Hobman, J.L.7
  • 38
    • 0033206810 scopus 로고    scopus 로고
    • Tomato seed and root exudate sugars: Composition, utilization by Pseudomonas biocontrol strains and role in rhizosphere colonization
    • Lugtenberg, B. J., Kravchenko, L. V. & Simons,M. (1999). Tomato seed and root exudate sugars: composition, utilization by Pseudomonas biocontrol strains and role in rhizosphere colonization. Environ Microbiol 1, 439-446.
    • (1999) Environ Microbiol , vol.1 , pp. 439-446
    • Lugtenberg, B.J.1    Kravchenko, L.V.2    Simons, M.3
  • 39
    • 80053648189 scopus 로고    scopus 로고
    • Engineering multiple genomic deletions in Gram-negative bacteria: Analysis of the multiresistant antibiotic profile of Pseudomonas putida KT2440
    • Martínez-García, E. & de Lorenzo, V. (2011). Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multiresistant antibiotic profile of Pseudomonas putida KT2440. Environ Microbiol 13, 2702-2716.
    • (2011) Environ Microbiol , vol.13 , pp. 2702-2716
    • Martínez-García, E.1    de Lorenzo, V.2
  • 40
    • 79951794467 scopus 로고    scopus 로고
    • pBAM1: An all-synthetic genetic tool for analysis and construction of complex bacterial phenotypes
    • Martínez-García, E., Calles, B., Arévalo-Rodríguez, M. & de Lorenzo, V. (2011). pBAM1: an all-synthetic genetic tool for analysis and construction of complex bacterial phenotypes. BMC Microbiol 11, 38.
    • (2011) BMC Microbiol , vol.11 , pp. 38
    • Martínez-García, E.1    Calles, B.2    Arévalo-Rodríguez, M.3    de Lorenzo, V.4
  • 41
    • 77954843913 scopus 로고    scopus 로고
    • LapF, the second largest Pseudomonas putida protein, contributes to plant root colonization and determines biofilm architecture
    • Martínez-Gil, M., Yousef-Coronado, F. & Espinosa-Urgel, M. (2010). LapF, the second largest Pseudomonas putida protein, contributes to plant root colonization and determines biofilm architecture. Mol Microbiol 77, 549-561.
    • (2010) Mol Microbiol , vol.77 , pp. 549-561
    • Martínez-Gil, M.1    Yousef-Coronado, F.2    Espinosa-Urgel, M.3
  • 43
    • 84896474875 scopus 로고    scopus 로고
    • Roles of cyclic di-GMP and the Gac system in transcriptional control of the genes coding for the Pseudomonas putida adhesins LapA and LapF
    • Martínez-Gil, M., Ramos-González, M. I. & Espinosa-Urgel, M. (2014). Roles of cyclic di-GMP and the Gac system in transcriptional control of the genes coding for the Pseudomonas putida adhesins LapA and LapF. J Bacteriol 196, 1484-1495.
    • (2014) J Bacteriol , vol.196 , pp. 1484-1495
    • Martínez-Gil, M.1    Ramos-González, M.I.2    Espinosa-Urgel, M.3
  • 44
    • 63349086688 scopus 로고    scopus 로고
    • Comparative proteomic studies of root- microbe interactions
    • Mathesius, U. (2009). Comparative proteomic studies of root- microbe interactions. J Proteomics 72, 353-366.
    • (2009) J Proteomics , vol.72 , pp. 353-366
    • Mathesius, U.1
  • 46
    • 79959813633 scopus 로고    scopus 로고
    • Cyclic diguanylate turnover mediated by the sole GGDEF/ EAL response regulator in Pseudomonas putida: Its role in the rhizosphere and an analysis of its target processes
    • Matilla, M. A., Travieso, M. L., Ramos, J. L. & Ramos-González, M. I. (2011). Cyclic diguanylate turnover mediated by the sole GGDEF/ EAL response regulator in Pseudomonas putida: its role in the rhizosphere and an analysis of its target processes. Environ Microbiol 13, 1745-1766.
    • (2011) Environ Microbiol , vol.13 , pp. 1745-1766
    • Matilla, M.A.1    Travieso, M.L.2    Ramos, J.L.3    Ramos-González, M.I.4
  • 47
    • 0033626325 scopus 로고    scopus 로고
    • Pyoverdines: Pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species
    • Meyer, J. M. (2000). Pyoverdines: pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species. Arch Microbiol 174, 135-142.
    • (2000) Arch Microbiol , vol.174 , pp. 135-142
    • Meyer, J.M.1
  • 48
    • 84866160892 scopus 로고    scopus 로고
    • Epitope of titin A-band-specific monoclonal antibody Tit1 5 H1.1 is highly conserved in several Fn3 domains of the titin molecule. Centriole staining in human, mouse and zebrafish cells
    • Mikelsaar, A. V., Sünter, A., Mikelsaar, R., Toomik, P., Kõiveer, A., Mikelsaar, I. & Juronen, E. (2012a). Epitope of titin A-band-specific monoclonal antibody Tit1 5 H1.1 is highly conserved in several Fn3 domains of the titin molecule. Centriole staining in human, mouse and zebrafish cells. Cell Div 7, 21.
    • (2012) Cell Div , vol.7 , pp. 21
    • Mikelsaar, A.V.1    Sünter, A.2    Mikelsaar, R.3    Toomik, P.4    Kõiveer, A.5    Mikelsaar, I.6    Juronen, E.7
  • 49
    • 84915789186 scopus 로고    scopus 로고
    • Development of new monoclonal antibodies for immunocytochemical characterization of neural stem and differentiated cells
    • Edited by D. T. Sun. Rijecka: Intech
    • Mikelsaar, A. V., Sünter, A., Toomik, P., Karpson, K. & Juronen, E. (2012b). Development of new monoclonal antibodies for immunocytochemical characterization of neural stem and differentiated cells. In Neural Stem Cells and Therapy, pp. 93-118. Edited by D. T. Sun. Rijecka: Intech.
    • (2012) Neural Stem Cells and Therapy , pp. 93-118
    • Mikelsaar, A.V.1    Sünter, A.2    Toomik, P.3    Karpson, K.4    Juronen, E.5
  • 52
    • 62549150834 scopus 로고    scopus 로고
    • LapD is a bis- (39,59)-cyclic dimeric GMP-binding protein that regulates surface attachment by Pseudomonas fluorescens Pf0-1
    • Newell, P. D., Monds, R. D. & O'Toole, G. A. (2009). LapD is a bis- (39,59)-cyclic dimeric GMP-binding protein that regulates surface attachment by Pseudomonas fluorescens Pf0-1. Proc Natl Acad Sci U S A 106, 3461-3466.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 3461-3466
    • Newell, P.D.1    Monds, R.D.2    O'Toole, G.A.3
  • 53
    • 80052519940 scopus 로고    scopus 로고
    • Systematic analysis of diguanylate cyclases that promote biofilm formation by Pseudomonas fluorescens Pf0-1
    • Newell, P. D., Yoshioka, S., Hvorecny, K. L., Monds, R. D. & O'Toole, G. A. (2011). Systematic analysis of diguanylate cyclases that promote biofilm formation by Pseudomonas fluorescens Pf0-1. J Bacteriol 193, 4685-4698.
    • (2011) J Bacteriol , vol.193 , pp. 4685-4698
    • Newell, P.D.1    Yoshioka, S.2    Hvorecny, K.L.3    Monds, R.D.4    O'Toole, G.A.5
  • 54
  • 55
    • 0031970701 scopus 로고    scopus 로고
    • Initiation of biofilm formation in Pseudomonas fluorescens WCS365 proceeds via multiple, convergent signalling pathways: A genetic analysis
    • O'Toole, G. A. & Kolter, R. (1998). Initiation of biofilm formation in Pseudomonas fluorescens WCS365 proceeds via multiple, convergent signalling pathways: a genetic analysis. Mol Microbiol 28, 449-461.
    • (1998) Mol Microbiol , vol.28 , pp. 449-461
    • O'Toole, G.A.1    Kolter, R.2
  • 56
    • 0028953095 scopus 로고
    • Sequence, regulation, and functions of fis in Salmonella typhimurium
    • Osuna, R., Lienau, D., Hughes, K. T. & Johnson, R. C. (1995). Sequence, regulation, and functions of fis in Salmonella typhimurium. J Bacteriol 177, 2021-2032.
    • (1995) J Bacteriol , vol.177 , pp. 2021-2032
    • Osuna, R.1    Lienau, D.2    Hughes, K.T.3    Johnson, R.C.4
  • 57
    • 18444362128 scopus 로고    scopus 로고
    • DksA represses ribosomal gene transcription in Pseudomonas aeruginosa by interacting with RNA polymerase on ribosomal promoters
    • Perron, K., Comte, R. & van Delden, C. (2005). DksA represses ribosomal gene transcription in Pseudomonas aeruginosa by interacting with RNA polymerase on ribosomal promoters. Mol Microbiol 56, 1087-1102.
    • (2005) Mol Microbiol , vol.56 , pp. 1087-1102
    • Perron, K.1    Comte, R.2    van Delden, C.3
  • 58
    • 84867053559 scopus 로고    scopus 로고
    • The nucleoid-associated protein Fis directly modulates the synthesis of cellulose, an essential component of pellicle-biofilms in the phytopathogenic bacterium Dickeya dadantii
    • Prigent-Combaret, C., Zghidi-Abouzid, O., Effantin, G., Lejeune, P., Reverchon, S. & Nasser, W. (2012). The nucleoid-associated protein Fis directly modulates the synthesis of cellulose, an essential component of pellicle-biofilms in the phytopathogenic bacterium Dickeya dadantii. Mol Microbiol 86, 172-186.
    • (2012) Mol Microbiol , vol.86 , pp. 172-186
    • Prigent-Combaret, C.1    Zghidi-Abouzid, O.2    Effantin, G.3    Lejeune, P.4    Reverchon, S.5    Nasser, W.6
  • 59
    • 20444495696 scopus 로고    scopus 로고
    • Analysis of Pseudomonas putida KT2440 gene expression in the maize rhizosphere: In vivo expression technology capture and identification of root-activated promoters
    • Ramos-González, M. I., Campos, M. J. & Ramos, J. L. (2005). Analysis of Pseudomonas putida KT2440 gene expression in the maize rhizosphere: in vivo expression technology capture and identification of root-activated promoters. J Bacteriol 187, 4033-4041.
    • (2005) J Bacteriol , vol.187 , pp. 4033-4041
    • Ramos-González, M.I.1    Campos, M.J.2    Ramos, J.L.3
  • 60
    • 34250012624 scopus 로고    scopus 로고
    • A degradation product of the salicylic acid pathway triggers oxidative stress resulting in down-regulation of Bacillus subtilis biofilm formation on Arabidopsis thaliana roots
    • Rudrappa, T., Quinn, W. J., Stanley-Wall, N. R. & Bais, H. P. (2007). A degradation product of the salicylic acid pathway triggers oxidative stress resulting in down-regulation of Bacillus subtilis biofilm formation on Arabidopsis thaliana roots. Planta 226, 283-297.
    • (2007) Planta , vol.226 , pp. 283-297
    • Rudrappa, T.1    Quinn, W.J.2    Stanley-Wall, N.R.3    Bais, H.P.4
  • 61
    • 63849126614 scopus 로고    scopus 로고
    • Synergistic role of curli and cellulose in cell adherence and biofilm formation of attaching and effacing Escherichia coli and identification of Fis as a negative regulator of curli
    • Saldaña, Z., Xicohtencatl-Cortes, J., Avelino, F., Phillips, A. D., Kaper, J. B., Puente, J. L. & Girón, J. A. (2009). Synergistic role of curli and cellulose in cell adherence and biofilm formation of attaching and effacing Escherichia coli and identification of Fis as a negative regulator of curli. Environ Microbiol 11, 992-1006.
    • (2009) Environ Microbiol , vol.11 , pp. 992-1006
    • Saldaña, Z.1    Xicohtencatl-Cortes, J.2    Avelino, F.3    Phillips, A.D.4    Kaper, J.B.5    Puente, J.L.6    Girón, J.A.7
  • 63
    • 0034750184 scopus 로고    scopus 로고
    • Characterization of phenotypic changes in Pseudomonas putida in response to surface-associated growth
    • Sauer, K. & Camper, A. K. (2001). Characterization of phenotypic changes in Pseudomonas putida in response to surface-associated growth. J Bacteriol 183, 6579-6589.
    • (2001) J Bacteriol , vol.183 , pp. 6579-6589
    • Sauer, K.1    Camper, A.K.2
  • 64
    • 34248679167 scopus 로고    scopus 로고
    • Tricine-SDS-PAGE
    • Schägger, H. (2006). Tricine-SDS-PAGE. Nat Protoc 1, 16-22.
    • (2006) Nat Protoc , vol.1 , pp. 16-22
    • Schägger, H.1
  • 65
    • 0033404486 scopus 로고    scopus 로고
    • A DNA architectural protein couples cellular physiology and DNA topology in Escherichia coli
    • Schneider, R., Travers, A., Kutateladze, T. & Muskhelishvili, G. (1999). A DNA architectural protein couples cellular physiology and DNA topology in Escherichia coli. Mol Microbiol 34, 953-964.
    • (1999) Mol Microbiol , vol.34 , pp. 953-964
    • Schneider, R.1    Travers, A.2    Kutateladze, T.3    Muskhelishvili, G.4
  • 67
    • 0029665023 scopus 로고    scopus 로고
    • Preparation of electrocompetent E. coli using salt-free growth medium
    • Sharma, R. C. & Schimke, R. T. (1996). Preparation of electrocompetent E. coli using salt-free growth medium. Biotechniques 20, 42-44.
    • (1996) Biotechniques , vol.20 , pp. 42-44
    • Sharma, R.C.1    Schimke, R.T.2
  • 68
    • 0035788453 scopus 로고    scopus 로고
    • Roles for Fis and YafK in biofilm formation by enteroaggregative Escherichia coli
    • Sheikh, J., Hicks, S., Dall'Agnol, M., Phillips, A. D. & Nataro, J. P. (2001). Roles for Fis and YafK in biofilm formation by enteroaggregative Escherichia coli. Mol Microbiol 41, 983-997.
    • (2001) Mol Microbiol , vol.41 , pp. 983-997
    • Sheikh, J.1    Hicks, S.2    Dall'Agnol, M.3    Phillips, A.D.4    Nataro, J.P.5
  • 69
    • 0023042283 scopus 로고
    • Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes
    • Studier, F. W. & Moffatt, B. A. (1986). Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J Mol Biol 189, 113-130.
    • (1986) J Mol Biol , vol.189 , pp. 113-130
    • Studier, F.W.1    Moffatt, B.A.2
  • 70
    • 65649091321 scopus 로고    scopus 로고
    • Fis negatively affects binding of Tn4652 transposase by out-competing IHF from the left end of Tn4652
    • Teras, R., Jakovleva, J. & Kivisaar, M. (2009). Fis negatively affects binding of Tn4652 transposase by out-competing IHF from the left end of Tn4652. Microbiology 155, 1203-1214.
    • (2009) Microbiology , vol.155 , pp. 1203-1214
    • Teras, R.1    Jakovleva, J.2    Kivisaar, M.3
  • 71
    • 0035082155 scopus 로고    scopus 로고
    • DNA supercoiling and transcription in Escherichia coli: The FIS connection
    • Travers, A., Schneider, R. & Muskhelishvili, G. (2001). DNA supercoiling and transcription in Escherichia coli: the FIS connection. Biochimie 83, 213-217.
    • (2001) Biochimie , vol.83 , pp. 213-217
    • Travers, A.1    Schneider, R.2    Muskhelishvili, G.3
  • 72
    • 78651267246 scopus 로고    scopus 로고
    • Pseudomonas Genome Database: Improved comparative analysis and population genomics capability for Pseudomonas genomes
    • Winsor, G. L., Lam, D. K. W., Fleming, L., Lo, R., Whiteside, M. D., Yu, N. Y., Hancock, R. E. W. & Brinkman, F. S. L. (2011). Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes. Nucleic Acids Res 39 (Database issue), D596-D600.
    • (2011) Nucleic Acids Res , vol.39 , Issue.Database issue , pp. D596-D600
    • Winsor, G.L.1    Lam, D.K.W.2    Fleming, L.3    Lo, R.4    Whiteside, M.D.5    Yu, N.Y.6    Hancock, R.E.W.7    Brinkman, F.S.L.8
  • 73
    • 67349266694 scopus 로고    scopus 로고
    • Universal sample preparation method for proteome analysis
    • Wiśniewski, J. R., Zougman, A., Nagaraj, N. & Mann, M. (2009). Universal sample preparation method for proteome analysis. Nat Methods 6, 359-362.
    • (2009) Nat Methods , vol.6 , pp. 359-362
    • Wiśniewski, J.R.1    Zougman, A.2    Nagaraj, N.3    Mann, M.4
  • 74
    • 0034730128 scopus 로고    scopus 로고
    • Genetic footprinting with mariner-based transposition in Pseudomonas aeruginosa
    • Wong, S. M. & Mekalanos, J. J. (2000). Genetic footprinting with mariner-based transposition in Pseudomonas aeruginosa. Proc Natl Acad Sci U S A 97, 10191-10196.
    • (2000) Proc Natl Acad Sci U S A , vol.97 , pp. 10191-10196
    • Wong, S.M.1    Mekalanos, J.J.2
  • 75
    • 0028816422 scopus 로고
    • Identification of genes negatively regulated by Fis: Fis and RpoS comodulate growth-phase-dependent gene expression in Escherichia coli
    • Xu, J. & Johnson, R. C. (1995). Identification of genes negatively regulated by Fis: Fis and RpoS comodulate growth-phase-dependent gene expression in Escherichia coli. J Bacteriol 177, 938-947.
    • (1995) J Bacteriol , vol.177 , pp. 938-947
    • Xu, J.1    Johnson, R.C.2
  • 76
    • 69949111853 scopus 로고    scopus 로고
    • Swarming of Pseudomonas aeruginosa is controlled by a broad spectrum of transcriptional regulators, including MetR
    • Yeung, A. T., Torfs, E. C., Jamshidi, F., Bains, M., Wiegand, I., Hancock, R. E. & Overhage, J. (2009). Swarming of Pseudomonas aeruginosa is controlled by a broad spectrum of transcriptional regulators, including MetR. J Bacteriol 191, 5592-5602.
    • (2009) J Bacteriol , vol.191 , pp. 5592-5602
    • Yeung, A.T.1    Torfs, E.C.2    Jamshidi, F.3    Bains, M.4    Wiegand, I.5    Hancock, R.E.6    Overhage, J.7
  • 77
    • 52649091370 scopus 로고    scopus 로고
    • Different, overlapping mechanisms for colonization of abiotic and plant surfaces by Pseudomonas putida
    • Yousef-Coronado, F., Travieso, M. L. & Espinosa-Urgel, M. (2008). Different, overlapping mechanisms for colonization of abiotic and plant surfaces by Pseudomonas putida. FEMS Microbiol Lett 288, 118- 124.
    • (2008) FEMS Microbiol Lett , vol.288 , pp. 118-124
    • Yousef-Coronado, F.1    Travieso, M.L.2    Espinosa-Urgel, M.3
  • 79
    • 33644952730 scopus 로고    scopus 로고
    • Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray
    • Yuste, L., Hervás, A. B., Canosa, I., Tobes, R., Jiménez, J. I., Nogales, J., Pérez-Pérez, M. M., Santero, E., Díaz, E. & other authors (2006). Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray. Environ Microbiol 8, 165-177.
    • (2006) Environ Microbiol , vol.8 , pp. 165-177
    • Yuste, L.1    Hervás, A.B.2    Canosa, I.3    Tobes, R.4    Jiménez, J.I.5    Nogales, J.6    Pérez-Pérez, M.M.7    Santero, E.8    Díaz, E.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.