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Volumn 5, Issue 1, 2010, Pages

Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042

(20)  Chaudhuri, Roy R a   Sebaihia, Mohammed b   Hobman, Jon L c   Webber, Mark A d   Leyton, Denisse L d   Goldberg, Martin D d   Cunningham, Adam F d   Scott Tucker, Anthony d   Ferguson, Paul R d   Thomas, Christopher M d   Frankel, Gad e   Tang, Christoph M e   Dudley, Edward G f   Roberts, Ian S g   Rasko, David A h   Pallen, Mark J d   Parkhill, Julian b   Nataro, James P h   Thomson, Nicholas R b   Henderson, Ian R d  


Author keywords

[No Author keywords available]

Indexed keywords

ACRIFLAVINE; CEFTRIAXONE; CHLORAMPHENICOL; CIPROFLOXACIN; CLOXACILLIN; ERYTHROMYCIN; ETHIDIUM BROMIDE; GENTAMICIN; NALIDIXIC ACID; POLYSACCHARIDE; PROTEIN; SPECTINOMYCIN; STREPTOMYCIN; TETRACYCLINE; TRICLOSAN; VIRULENCE FACTOR; ANTIINFECTIVE AGENT; CARBON; ESCHERICHIA COLI PROTEIN; IRON; OUTER MEMBRANE PROTEIN; PRIMER DNA; YTFM PROTEIN, E COLI;

EID: 77649289609     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0008801     Document Type: Article
Times cited : (148)

References (117)
  • 3
    • 58149498183 scopus 로고    scopus 로고
    • Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69
    • Iguchi A, Thomson NR, Ogura Y, Saunders D, Ooka T, et al. (2009) Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69. J Bacteriol 191: 347-354.
    • (2009) J Bacteriol , vol.191 , pp. 347-354
    • Iguchi, A.1    Thomson, N.R.2    Ogura, Y.3    Saunders, D.4    Ooka, T.5
  • 6
    • 33645062654 scopus 로고    scopus 로고
    • Pathogenesis of enteroaggregative Escherichia coli infection
    • Harrington SM, Dudley EG, Nataro JP (2006) Pathogenesis of enteroaggregative Escherichia coli infection. FEMS Microbiol Lett 254: 12-18.
    • (2006) FEMS Microbiol Lett , vol.254 , pp. 12-18
    • Harrington, S.M.1    Dudley, E.G.2    Nataro, J.P.3
  • 7
    • 0028894779 scopus 로고
    • Heterogeneity of enteroaggregative Escherichia coli virulence demonstrated in volunteers
    • Nataro JP, Deng Y, Cookson S, Cravioto A, Savarino SJ, et al. (1995) Heterogeneity of enteroaggregative Escherichia coli virulence demonstrated in volunteers. J Infect Dis 171: 465-468.
    • (1995) J Infect Dis , vol.171 , pp. 465-468
    • Nataro, J.P.1    Deng, Y.2    Cookson, S.3    Cravioto, A.4    Savarino, S.J.5
  • 8
    • 0036906492 scopus 로고    scopus 로고
    • Characterisation of strains of enteroaggregative Escherichia coli isolated during the infectious intestinal disease study in England
    • Wilson A, Evans J, Chart H, Cheasty T, Wheeler JG, et al. (2001) Characterisation of strains of enteroaggregative Escherichia coli isolated during the infectious intestinal disease study in England. Eur J Epidemiol 17: 1125-1130.
    • (2001) Eur J Epidemiol , vol.17 , pp. 1125-1130
    • Wilson, A.1    Evans, J.2    Chart, H.3    Cheasty, T.4    Wheeler, J.G.5
  • 9
    • 33746612376 scopus 로고    scopus 로고
    • Diarrheagenic Escherichia coli infection in Baltimore, Maryland, and New Haven, Connecticut
    • Nataro JP, Mai V, Johnson J, Blackwelder WC, Heimer R, et al. (2006) Diarrheagenic Escherichia coli infection in Baltimore, Maryland, and New Haven, Connecticut. Clin Infect Dis 43: 402-407.
    • (2006) Clin Infect Dis , vol.43 , pp. 402-407
    • Nataro, J.P.1    Mai, V.2    Johnson, J.3    Blackwelder, W.C.4    Heimer, R.5
  • 10
    • 33747618751 scopus 로고    scopus 로고
    • Enteroaggregative Escherichia coli is a cause of acute diarrheal illness: A meta-analysis
    • Huang DB, Nataro JP, DuPont HL, Kamat PP, Mhatre AD, et al. (2006) Enteroaggregative Escherichia coli is a cause of acute diarrheal illness: a meta-analysis. Clin Infect Dis 43: 556-563.
    • (2006) Clin Infect Dis , vol.43 , pp. 556-563
    • Huang, D.B.1    Nataro, J.P.2    DuPont, H.L.3    Kamat, P.P.4    Mhatre, A.D.5
  • 11
    • 27244433581 scopus 로고    scopus 로고
    • Aggregative adherence fimbriae contribute to the inflammatory response of epithelial cells infected with enteroaggregative Escherichia coli
    • Harrington SM, Strauman MC, Abe CM, Nataro JP (2005) Aggregative adherence fimbriae contribute to the inflammatory response of epithelial cells infected with enteroaggregative Escherichia coli. Cell Microbiol 7: 1565-1578.
    • (2005) Cell Microbiol , vol.7 , pp. 1565-1578
    • Harrington, S.M.1    Strauman, M.C.2    Abe, C.M.3    Nataro, J.P.4
  • 12
    • 13244265848 scopus 로고    scopus 로고
    • Enteroaggregative Escherichia coli pathogenesis
    • Nataro JP (2005) Enteroaggregative Escherichia coli pathogenesis. Curr Opin Gastroenterol 21: 4-8.
    • (2005) Curr Opin Gastroenterol , vol.21 , pp. 4-8
    • Nataro, J.P.1
  • 13
    • 0033945681 scopus 로고    scopus 로고
    • Enteroaggregative Escherichia coli expresses a novel flagellin that causes IL-8 release from intestinal epithelial cells
    • Steiner TS, Nataro JP, Poteet-Smith CE, Smith JA, Guerrant RL (2000) Enteroaggregative Escherichia coli expresses a novel flagellin that causes IL-8 release from intestinal epithelial cells. J Clin Invest 105: 1769-1777.
    • (2000) J Clin Invest , vol.105 , pp. 1769-1777
    • Steiner, T.S.1    Nataro, J.P.2    Poteet-Smith, C.E.3    Smith, J.A.4    Guerrant, R.L.5
  • 14
    • 0031975942 scopus 로고    scopus 로고
    • Enteroaggregative Escherichia coli produce intestinal inflammation and growth impairment and cause interleukin-8 release from intestinal epithelial cells
    • Steiner TS, Lima AA, Nataro JP, Guerrant RL (1998) Enteroaggregative Escherichia coli produce intestinal inflammation and growth impairment and cause interleukin-8 release from intestinal epithelial cells. J Infect Dis 177: 88-96.
    • (1998) J Infect Dis , vol.177 , pp. 88-96
    • Steiner, T.S.1    Lima, A.A.2    Nataro, J.P.3    Guerrant, R.L.4
  • 15
    • 0032881401 scopus 로고    scopus 로고
    • Involvement of the enteroaggregative Escherichia coli plasmid-encoded toxin in causing human intestinal damage
    • Henderson IR, Hicks S, Navarro-Garcia F, Elias WP, Philips AD, et al. (1999) Involvement of the enteroaggregative Escherichia coli plasmid-encoded toxin in causing human intestinal damage. Infect Immun 67: 5338-5344.
    • (1999) Infect Immun , vol.67 , pp. 5338-5344
    • Henderson, I.R.1    Hicks, S.2    Navarro-Garcia, F.3    Elias, W.P.4    Philips, A.D.5
  • 17
    • 0031818658 scopus 로고    scopus 로고
    • Enteroaggregative Escherichia coli as a potential cause of diarrheal disease in adults infected with human immunodeficiency virus
    • Wanke CA, Mayer H, Weber R, Zbinden R, Watson DA, et al. (1998) Enteroaggregative Escherichia coli as a potential cause of diarrheal disease in adults infected with human immunodeficiency virus. J Infect Dis 178: 185-190.
    • (1998) J Infect Dis , vol.178 , pp. 185-190
    • Wanke, C.A.1    Mayer, H.2    Weber, R.3    Zbinden, R.4    Watson, D.A.5
  • 19
    • 0032734808 scopus 로고    scopus 로고
    • Characterization of pic, a secreted protease of Shigella flexneri and enteroaggregative Escherichia coli
    • Henderson IR, Czeczulin J, Eslava C, Noriega F, Nataro JP (1999) Characterization of pic, a secreted protease of Shigella flexneri and enteroaggregative Escherichia coli. Infect Immun 67: 5587-5596.
    • (1999) Infect Immun , vol.67 , pp. 5587-5596
    • Henderson, I.R.1    Czeczulin, J.2    Eslava, C.3    Noriega, F.4    Nataro, J.P.5
  • 20
    • 33747080208 scopus 로고    scopus 로고
    • Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli
    • Dudley EG, Thomson NR, Parkhill J, Morin NP, Nataro JP (2006) Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli. Mol Microbiol 61: 1267-1282.
    • (2006) Mol Microbiol , vol.61 , pp. 1267-1282
    • Dudley, E.G.1    Thomson, N.R.2    Parkhill, J.3    Morin, N.P.4    Nataro, J.P.5
  • 21
    • 77649312412 scopus 로고    scopus 로고
    • Kroenker R (2008) quantreg: Quantile Regression. R package version 4.24
    • Kroenker R (2008) quantreg: Quantile Regression. R package version 4.24.
  • 22
    • 53849104729 scopus 로고    scopus 로고
    • The pangenome structure of Escherichia coli: Comparative genomic analysis of E. coli commensal and pathogenic isolates
    • Rasko DA, Rosovitz MJ, Myers GS, Mongodin EF, Fricke WF, et al. (2008) The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates. J Bacteriol 190: 6881-6893.
    • (2008) J Bacteriol , vol.190 , pp. 6881-6893
    • Rasko, D.A.1    Rosovitz, M.J.2    Myers, G.S.3    Mongodin, E.F.4    Fricke, W.F.5
  • 23
    • 59249089471 scopus 로고    scopus 로고
    • Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, et al. (2009) Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet 5: e1000344.
    • Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, et al. (2009) Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet 5: e1000344.
  • 24
    • 33645827531 scopus 로고    scopus 로고
    • Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: A comparative genomics approach
    • Chen SL, Hung CS, Xu J, Reigstad CS, Magrini V, et al. (2006) Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: A comparative genomics approach. Proc Natl Acad Sci U S A 103: 5977-5982.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 5977-5982
    • Chen, S.L.1    Hung, C.S.2    Xu, J.3    Reigstad, C.S.4    Magrini, V.5
  • 25
    • 60549112381 scopus 로고    scopus 로고
    • Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains
    • Jaureguy F, Landreau L, Passet V, Diancourt L, Frapy E, et al. (2008) Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains. BMC Genomics 9: 560.
    • (2008) BMC Genomics , vol.9 , pp. 560
    • Jaureguy, F.1    Landreau, L.2    Passet, V.3    Diancourt, L.4    Frapy, E.5
  • 26
    • 34248373709 scopus 로고    scopus 로고
    • Laboratory strains of Escherichia coli: Model citizens or deceitful delinquents growing old disgracefully?
    • Hobman JL, Penn CW, Pallen MJ (2007) Laboratory strains of Escherichia coli: model citizens or deceitful delinquents growing old disgracefully? Mol Microbiol 64: 881-885.
    • (2007) Mol Microbiol , vol.64 , pp. 881-885
    • Hobman, J.L.1    Penn, C.W.2    Pallen, M.J.3
  • 27
    • 0026664159 scopus 로고
    • Drug resistance and adherence to human intestines of enteroaggregative Escherichia coli
    • Yamamoto T, Echeverria P, Yokota T (1992) Drug resistance and adherence to human intestines of enteroaggregative Escherichia coli. J Infect Dis 165: 744-749.
    • (1992) J Infect Dis , vol.165 , pp. 744-749
    • Yamamoto, T.1    Echeverria, P.2    Yokota, T.3
  • 28
    • 67650770116 scopus 로고    scopus 로고
    • Evolution of antimicrobial resistance in enteroaggregative Escherichia coli and enterotoxigenic Escherichia coli causing traveller's diarrhoea
    • Mendez Arancibia E, Pitart C, Ruiz J, Marco F, Gascon J, et al. (2009) Evolution of antimicrobial resistance in enteroaggregative Escherichia coli and enterotoxigenic Escherichia coli causing traveller's diarrhoea. J Antimicrob Chemother 64: 343-347.
    • (2009) J Antimicrob Chemother , vol.64 , pp. 343-347
    • Mendez Arancibia, E.1    Pitart, C.2    Ruiz, J.3    Marco, F.4    Gascon, J.5
  • 29
    • 0032763054 scopus 로고    scopus 로고
    • Antimicrobial resistance of diarrheagenic Escherichia coli isolated from children under the age of 5 years from Ifakara, Tanzania
    • Vila J, Vargas M, Casals C, Urassa H, Mshinda H, et al. (1999) Antimicrobial resistance of diarrheagenic Escherichia coli isolated from children under the age of 5 years from Ifakara, Tanzania. Antimicrob Agents Chemother 43: 3022-3024.
    • (1999) Antimicrob Agents Chemother , vol.43 , pp. 3022-3024
    • Vila, J.1    Vargas, M.2    Casals, C.3    Urassa, H.4    Mshinda, H.5
  • 30
    • 0031183922 scopus 로고    scopus 로고
    • Multidrug-resistant enteroaggregative Escherichia coli associated with persistent diarrhea in Kenyan children
    • Sang WK, Oundo JO, Mwituria JK, Waiyaki PG, Yoh M, et al. (1997) Multidrug-resistant enteroaggregative Escherichia coli associated with persistent diarrhea in Kenyan children. Emerg Infect Dis 3: 373-374.
    • (1997) Emerg Infect Dis , vol.3 , pp. 373-374
    • Sang, W.K.1    Oundo, J.O.2    Mwituria, J.K.3    Waiyaki, P.G.4    Yoh, M.5
  • 31
    • 0034776986 scopus 로고    scopus 로고
    • Susceptibility patterns of enteroaggregative Escherichia coli associated with traveller's diarrhoea: Emergence of quinolone resistance
    • Vila J, Vargas M, Ruiz J, Espasa M, Pujol M, et al. (2001) Susceptibility patterns of enteroaggregative Escherichia coli associated with traveller's diarrhoea: emergence of quinolone resistance. J Med Microbiol 50: 996-1000.
    • (2001) J Med Microbiol , vol.50 , pp. 996-1000
    • Vila, J.1    Vargas, M.2    Ruiz, J.3    Espasa, M.4    Pujol, M.5
  • 33
    • 0028796058 scopus 로고
    • Dual mode of energy coupling by the oxyanion-translocating ArsB protein
    • Dey S, Rosen BP (1995) Dual mode of energy coupling by the oxyanion-translocating ArsB protein. J Bacteriol 177: 385-389.
    • (1995) J Bacteriol , vol.177 , pp. 385-389
    • Dey, S.1    Rosen, B.P.2
  • 34
    • 33747154459 scopus 로고    scopus 로고
    • Multidrug-resistance efflux pumps - not just for resistance
    • Piddock LJ (2006) Multidrug-resistance efflux pumps - not just for resistance. Nat Rev Microbiol 4: 629-636.
    • (2006) Nat Rev Microbiol , vol.4 , pp. 629-636
    • Piddock, L.J.1
  • 36
    • 27944458391 scopus 로고    scopus 로고
    • Enteroaggregative Escherichia coli isolated from Chinese diarrhea patients with high-pathogenicity island of Yersinia is involved in synthesis of siderophore yersiniabactin
    • Hu J, Kan B, Liu ZH, Yu SY (2005) Enteroaggregative Escherichia coli isolated from Chinese diarrhea patients with high-pathogenicity island of Yersinia is involved in synthesis of siderophore yersiniabactin. World J Gastroenterol 11: 5816-5820.
    • (2005) World J Gastroenterol , vol.11 , pp. 5816-5820
    • Hu, J.1    Kan, B.2    Liu, Z.H.3    Yu, S.Y.4
  • 37
    • 33748670718 scopus 로고    scopus 로고
    • A new ferrous iron-uptake transporter, EfeU (YcdN), from Escherichia coli
    • Grosse C, Scherer J, Koch D, Otto M, Taudte N, et al. (2006) A new ferrous iron-uptake transporter, EfeU (YcdN), from Escherichia coli. Mol Microbiol 62: 120-131.
    • (2006) Mol Microbiol , vol.62 , pp. 120-131
    • Grosse, C.1    Scherer, J.2    Koch, D.3    Otto, M.4    Taudte, N.5
  • 38
    • 18544371009 scopus 로고    scopus 로고
    • Metals, toxicity and oxidative stress
    • Valko M, Morris H, Cronin MT (2005) Metals, toxicity and oxidative stress. Curr Med Chem 12: 1161-1208.
    • (2005) Curr Med Chem , vol.12 , pp. 1161-1208
    • Valko, M.1    Morris, H.2    Cronin, M.T.3
  • 39
    • 34548213103 scopus 로고    scopus 로고
    • A common mechanism of cellular death induced by bactericidal antibiotics
    • Kohanski MA, Dwyer DJ, Hayete B, Lawrence CA, Collins JJ (2007) A common mechanism of cellular death induced by bactericidal antibiotics. Cell 130: 797-810.
    • (2007) Cell , vol.130 , pp. 797-810
    • Kohanski, M.A.1    Dwyer, D.J.2    Hayete, B.3    Lawrence, C.A.4    Collins, J.J.5
  • 40
    • 0141891398 scopus 로고    scopus 로고
    • Regulation of expression of the 2-deoxy-D-ribose utilization regulon, deoQKPX, from Salmonella enterica serovar typhimurium
    • Christensen M, Borza T, Dandanell G, Gilles AM, Barzu O, et al. (2003) Regulation of expression of the 2-deoxy-D-ribose utilization regulon, deoQKPX, from Salmonella enterica serovar typhimurium. J Bacteriol 185: 6042-6050.
    • (2003) J Bacteriol , vol.185 , pp. 6042-6050
    • Christensen, M.1    Borza, T.2    Dandanell, G.3    Gilles, A.M.4    Barzu, O.5
  • 41
    • 1242342950 scopus 로고    scopus 로고
    • Application of AgaR repressor and dominant repressor variants for verification of a gene cluster involved in N-acetylgalactosamine metabolism in Escherichia coli K-12
    • Ray WK, Larson TJ (2004) Application of AgaR repressor and dominant repressor variants for verification of a gene cluster involved in N-acetylgalactosamine metabolism in Escherichia coli K-12. Mol Microbiol 51: 813-826.
    • (2004) Mol Microbiol , vol.51 , pp. 813-826
    • Ray, W.K.1    Larson, T.J.2
  • 42
    • 0033910128 scopus 로고    scopus 로고
    • Pathways for the utilization of N-acetyl-galactosamine and galactosamine in Escherichia coli
    • Brinkkotter A, Kloss H, Alpert C, Lengeler JW (2000) Pathways for the utilization of N-acetyl-galactosamine and galactosamine in Escherichia coli. Mol Microbiol 37: 125-135.
    • (2000) Mol Microbiol , vol.37 , pp. 125-135
    • Brinkkotter, A.1    Kloss, H.2    Alpert, C.3    Lengeler, J.W.4
  • 43
    • 66549128947 scopus 로고    scopus 로고
    • The Pic protease of enteroaggregative Escherichia coli promotes intestinal colonization and growth in the presence of mucin
    • Harrington SM, Sheikh J, Henderson IR, Ruiz-Perez F, Cohen PS, et al. (2009) The Pic protease of enteroaggregative Escherichia coli promotes intestinal colonization and growth in the presence of mucin. Infect Immun 77: 2465-2473.
    • (2009) Infect Immun , vol.77 , pp. 2465-2473
    • Harrington, S.M.1    Sheikh, J.2    Henderson, I.R.3    Ruiz-Perez, F.4    Cohen, P.S.5
  • 44
    • 34249667242 scopus 로고    scopus 로고
    • L-Sorbose utilization by virulent Escherichia coli and Shigella: Different metabolic adaptation of pathotypes
    • Lehmacher A, Bockemuhl J (2007) L-Sorbose utilization by virulent Escherichia coli and Shigella: different metabolic adaptation of pathotypes. Int J Med Microbiol 297: 245-254.
    • (2007) Int J Med Microbiol , vol.297 , pp. 245-254
    • Lehmacher, A.1    Bockemuhl, J.2
  • 45
    • 0020402503 scopus 로고
    • Genes for l-sorbose utilization in Escherichia coli
    • Woodward MJ, Charles HP (1982) Genes for l-sorbose utilization in Escherichia coli. J Gen Microbiol 128: 1969-1980.
    • (1982) J Gen Microbiol , vol.128 , pp. 1969-1980
    • Woodward, M.J.1    Charles, H.P.2
  • 46
    • 33750951690 scopus 로고    scopus 로고
    • The Escherichia coli argW-dsdCXA genetic island is highly variable, and E. coli K1 strains commonly possess two copies of dsdCXA
    • Moritz RL, Welch RA (2006) The Escherichia coli argW-dsdCXA genetic island is highly variable, and E. coli K1 strains commonly possess two copies of dsdCXA. J Clin Microbiol 44: 4038-4048.
    • (2006) J Clin Microbiol , vol.44 , pp. 4038-4048
    • Moritz, R.L.1    Welch, R.A.2
  • 47
    • 0033998811 scopus 로고    scopus 로고
    • A common regulator for the operons encoding the enzymes involved in D-galactarate, D-glucarate, and D-glycerate utilization in Escherichia coli
    • Monterrubio R, Baldoma L, Obradors N, Aguilar J, Badia J (2000) A common regulator for the operons encoding the enzymes involved in D-galactarate, D-glucarate, and D-glycerate utilization in Escherichia coli. J Bacteriol 182: 2672-2674.
    • (2000) J Bacteriol , vol.182 , pp. 2672-2674
    • Monterrubio, R.1    Baldoma, L.2    Obradors, N.3    Aguilar, J.4    Badia, J.5
  • 48
    • 0032514651 scopus 로고    scopus 로고
    • Evolution of enzymatic activities in the enolase superfamily: Characterization of the (D)-glucarate/galactarate catabolic pathway in Escherichia coli
    • Hubbard BK, Koch M, Palmer DR, Babbitt PC, Gerlt JA (1998) Evolution of enzymatic activities in the enolase superfamily: characterization of the (D)-glucarate/galactarate catabolic pathway in Escherichia coli. Biochemistry 37: 14369-14375.
    • (1998) Biochemistry , vol.37 , pp. 14369-14375
    • Hubbard, B.K.1    Koch, M.2    Palmer, D.R.3    Babbitt, P.C.4    Gerlt, J.A.5
  • 49
    • 0030735584 scopus 로고    scopus 로고
    • The D-allose operon of Escherichia coli K-12
    • Kim C, Song S, Park C (1997) The D-allose operon of Escherichia coli K-12. J Bacteriol 179: 7631-7637.
    • (1997) J Bacteriol , vol.179 , pp. 7631-7637
    • Kim, C.1    Song, S.2    Park, C.3
  • 50
    • 0032748206 scopus 로고    scopus 로고
    • D-Allose catabolism of Escherichia coli: Involvement of alsI and regulation of als regulon expression by allose and ribose
    • Poulsen TS, Chang YY, Hove-Jensen B (1999) D-Allose catabolism of Escherichia coli: involvement of alsI and regulation of als regulon expression by allose and ribose. J Bacteriol 181: 7126-7130.
    • (1999) J Bacteriol , vol.181 , pp. 7126-7130
    • Poulsen, T.S.1    Chang, Y.Y.2    Hove-Jensen, B.3
  • 51
    • 7744237727 scopus 로고    scopus 로고
    • Pyruvate formate lyase and acetate kinase are essential for anaerobic growth of Escherichia coli on xylose
    • Hasona A, Kim Y, Healy FG, Ingram LO, Shanmugam KT (2004) Pyruvate formate lyase and acetate kinase are essential for anaerobic growth of Escherichia coli on xylose. J Bacteriol 186: 7593-7600.
    • (2004) J Bacteriol , vol.186 , pp. 7593-7600
    • Hasona, A.1    Kim, Y.2    Healy, F.G.3    Ingram, L.O.4    Shanmugam, K.T.5
  • 52
    • 0347479229 scopus 로고    scopus 로고
    • Molecular basis of bacterial outer membrane permeability revisited
    • Nikaido H (2003) Molecular basis of bacterial outer membrane permeability revisited. Microbiol Mol Biol Rev 67: 593-656.
    • (2003) Microbiol Mol Biol Rev , vol.67 , pp. 593-656
    • Nikaido, H.1
  • 53
    • 64649088018 scopus 로고    scopus 로고
    • Outer membrane permeability and antibiotic resistance
    • Delcour AH (2009) Outer membrane permeability and antibiotic resistance. Biochim Biophys Acta 1794: 808-816.
    • (2009) Biochim Biophys Acta , vol.1794 , pp. 808-816
    • Delcour, A.H.1
  • 54
    • 0020597554 scopus 로고
    • Porin channels in Escherichia coli: Studies with liposomes reconstituted from purified proteins
    • Nikaido H, Rosenberg EY (1983) Porin channels in Escherichia coli: studies with liposomes reconstituted from purified proteins. J Bacteriol 153: 241-252.
    • (1983) J Bacteriol , vol.153 , pp. 241-252
    • Nikaido, H.1    Rosenberg, E.Y.2
  • 55
    • 0030934759 scopus 로고    scopus 로고
    • Active efflux of bile salts by Escherichia coli
    • Thanassi DG, Cheng LW, Nikaido H (1997) Active efflux of bile salts by Escherichia coli. J Bacteriol 179: 2512-2518.
    • (1997) J Bacteriol , vol.179 , pp. 2512-2518
    • Thanassi, D.G.1    Cheng, L.W.2    Nikaido, H.3
  • 56
    • 0019814049 scopus 로고
    • Mutants of Escherichia coli that are resistant to certain beta-lactam compounds lack the ompF porin
    • Harder KJ, Nikaido H, Matsuhashi M (1981) Mutants of Escherichia coli that are resistant to certain beta-lactam compounds lack the ompF porin. Antimicrob Agents Chemother 20: 549-552.
    • (1981) Antimicrob Agents Chemother , vol.20 , pp. 549-552
    • Harder, K.J.1    Nikaido, H.2    Matsuhashi, M.3
  • 57
    • 67649861380 scopus 로고    scopus 로고
    • The porin OmpD from nontyphoidal Salmonella is a key target for a protective B1b cell antibody response
    • Gil-Cruz C, Bobat S, Marshall JL, Kingsley RA, Ross EA, et al. (2009) The porin OmpD from nontyphoidal Salmonella is a key target for a protective B1b cell antibody response. Proc Natl Acad Sci U S A 106: 9803-9808.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 9803-9808
    • Gil-Cruz, C.1    Bobat, S.2    Marshall, J.L.3    Kingsley, R.A.4    Ross, E.A.5
  • 60
    • 15744405122 scopus 로고    scopus 로고
    • Protein targeting by the bacterial twin-arginine translocation (Tat) pathway
    • Berks BC, Palmer T, Sargent F (2005) Protein targeting by the bacterial twin-arginine translocation (Tat) pathway. Curr Opin Microbiol 8: 174-181.
    • (2005) Curr Opin Microbiol , vol.8 , pp. 174-181
    • Berks, B.C.1    Palmer, T.2    Sargent, F.3
  • 61
    • 23944463004 scopus 로고    scopus 로고
    • Salmonella enterica serotype Typhimurium fimbrial proteins serve as antigens during infection of mice
    • Humphries A, Deridder S, Baumler AJ (2005) Salmonella enterica serotype Typhimurium fimbrial proteins serve as antigens during infection of mice. Infect Immun 73: 5329-5338.
    • (2005) Infect Immun , vol.73 , pp. 5329-5338
    • Humphries, A.1    Deridder, S.2    Baumler, A.J.3
  • 62
    • 0030764794 scopus 로고    scopus 로고
    • Adhesion to and invasion of HeLa cells by pathogenic Escherichia coli carrying the afa-3 gene cluster are mediated by the AfaE and AfaD proteins, respectively
    • Jouve M, Garcia MI, Courcoux P, Labigne A, Gounon P, et al. (1997) Adhesion to and invasion of HeLa cells by pathogenic Escherichia coli carrying the afa-3 gene cluster are mediated by the AfaE and AfaD proteins, respectively. Infect Immun 65: 4082-4089.
    • (1997) Infect Immun , vol.65 , pp. 4082-4089
    • Jouve, M.1    Garcia, M.I.2    Courcoux, P.3    Labigne, A.4    Gounon, P.5
  • 63
    • 0344562871 scopus 로고    scopus 로고
    • The structural gene for microcin H47 encodes a peptide precursor with antibiotic activity
    • Rodriguez E, Gaggero C, Lavina M (1999) The structural gene for microcin H47 encodes a peptide precursor with antibiotic activity. Antimicrob Agents Chemother 43: 2176-2182.
    • (1999) Antimicrob Agents Chemother , vol.43 , pp. 2176-2182
    • Rodriguez, E.1    Gaggero, C.2    Lavina, M.3
  • 64
    • 33845929576 scopus 로고    scopus 로고
    • Transcriptional regulation of the yghJ-pppA-yghG-gspCDEFGHIJKLM cluster, encoding the type II secretion pathway in enterotoxigenic Escherichia coli
    • Yang J, Baldi DL, Tauschek M, Strugnell RA, Robins-Browne RM (2007) Transcriptional regulation of the yghJ-pppA-yghG-gspCDEFGHIJKLM cluster, encoding the type II secretion pathway in enterotoxigenic Escherichia coli. J Bacteriol 189: 142-150.
    • (2007) J Bacteriol , vol.189 , pp. 142-150
    • Yang, J.1    Baldi, D.L.2    Tauschek, M.3    Strugnell, R.A.4    Robins-Browne, R.M.5
  • 65
    • 0037076418 scopus 로고    scopus 로고
    • Identification of a protein secretory pathway for the secretion of heat-labile enterotoxin by an enterotoxigenic strain of Escherichia coli
    • Tauschek M, Gorrell RJ, Strugnell RA, Robins-Browne RM (2002) Identification of a protein secretory pathway for the secretion of heat-labile enterotoxin by an enterotoxigenic strain of Escherichia coli. Proc Natl Acad Sci U S A 99: 7066-7071.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 7066-7071
    • Tauschek, M.1    Gorrell, R.J.2    Strugnell, R.A.3    Robins-Browne, R.M.4
  • 66
    • 0026082664 scopus 로고
    • ToxR regulates the production of lipoproteins and the expression of serum resistance in Vibrio cholerae
    • Parsot C, Taxman E, Mekalanos JJ (1991) ToxR regulates the production of lipoproteins and the expression of serum resistance in Vibrio cholerae. Proc Natl Acad Sci U S A 88: 1641-1645.
    • (1991) Proc Natl Acad Sci U S A , vol.88 , pp. 1641-1645
    • Parsot, C.1    Taxman, E.2    Mekalanos, J.J.3
  • 67
    • 0347169865 scopus 로고    scopus 로고
    • Pullulanase: Model protein substrate for the general secretory pathway of gram-negative bacteria
    • Pugsley AP, Francetic O, Hardie K, Possot OM, Sauvonnet N, et al. (1997) Pullulanase: model protein substrate for the general secretory pathway of gram-negative bacteria. Folia Microbiol (Praha) 42: 184-192.
    • (1997) Folia Microbiol (Praha) , vol.42 , pp. 184-192
    • Pugsley, A.P.1    Francetic, O.2    Hardie, K.3    Possot, O.M.4    Sauvonnet, N.5
  • 68
    • 57049125692 scopus 로고    scopus 로고
    • Bacterial flagella and Type III secretion: Case studies in the evolution of complexity
    • Pallen MJ, Gophna U (2007) Bacterial flagella and Type III secretion: case studies in the evolution of complexity. Genome Dyn 3: 30-47.
    • (2007) Genome Dyn , vol.3 , pp. 30-47
    • Pallen, M.J.1    Gophna, U.2
  • 69
    • 14544267783 scopus 로고    scopus 로고
    • The Flag-2 locus, an ancestral gene cluster, is potentially associated with a novel flagellar system from Escherichia coli
    • Ren CP, Beatson SA, Parkhill J, Pallen MJ (2005) The Flag-2 locus, an ancestral gene cluster, is potentially associated with a novel flagellar system from Escherichia coli. J Bacteriol 187: 1430-1440.
    • (2005) J Bacteriol , vol.187 , pp. 1430-1440
    • Ren, C.P.1    Beatson, S.A.2    Parkhill, J.3    Pallen, M.J.4
  • 70
    • 2442646490 scopus 로고    scopus 로고
    • The ETT2 gene cluster, encoding a second type III secretion system from Escherichia coli, is present in the majority of strains but has undergone widespread mutational attrition
    • Ren CP, Chaudhuri RR, Fivian A, Bailey CM, Antonio M, et al. (2004) The ETT2 gene cluster, encoding a second type III secretion system from Escherichia coli, is present in the majority of strains but has undergone widespread mutational attrition. J Bacteriol 186: 3547-3560.
    • (2004) J Bacteriol , vol.186 , pp. 3547-3560
    • Ren, C.P.1    Chaudhuri, R.R.2    Fivian, A.3    Bailey, C.M.4    Antonio, M.5
  • 71
    • 33748506880 scopus 로고    scopus 로고
    • EilA, a HilA-like regulator in enteroaggregative Escherichia coli
    • Sheikh J, Dudley EG, Sui B, Tamboura B, Suleman A, et al. (2006) EilA, a HilA-like regulator in enteroaggregative Escherichia coli. Mol Microbiol 61: 338-350.
    • (2006) Mol Microbiol , vol.61 , pp. 338-350
    • Sheikh, J.1    Dudley, E.G.2    Sui, B.3    Tamboura, B.4    Suleman, A.5
  • 72
    • 0041842499 scopus 로고    scopus 로고
    • Glucoamylase-like domains in the alpha- and beta-subunits of phosphorylase kinase
    • Pallen MJ (2003) Glucoamylase-like domains in the alpha- and beta-subunits of phosphorylase kinase. Protein Sci 12: 1804-1807.
    • (2003) Protein Sci , vol.12 , pp. 1804-1807
    • Pallen, M.J.1
  • 73
    • 67749127364 scopus 로고    scopus 로고
    • Role of periplasmic chaperones and BamA (YaeT/Omp85) in folding and secretion of intimin from enteropathogenic Escherichia coli strains
    • Bodelon G, Marin E, Fernandez LA (2009) Role of periplasmic chaperones and BamA (YaeT/Omp85) in folding and secretion of intimin from enteropathogenic Escherichia coli strains. J Bacteriol 191: 5169-5179.
    • (2009) J Bacteriol , vol.191 , pp. 5169-5179
    • Bodelon, G.1    Marin, E.2    Fernandez, L.A.3
  • 76
    • 0346492803 scopus 로고    scopus 로고
    • PicU, a second serine protease autotransporter of uropathogenic Escherichia coli
    • Parham NJ, Srinivasan U, Desvaux M, Foxman B, Marrs CF, et al. (2004) PicU, a second serine protease autotransporter of uropathogenic Escherichia coli. FEMS Microbiol Lett 230: 73-83.
    • (2004) FEMS Microbiol Lett , vol.230 , pp. 73-83
    • Parham, N.J.1    Srinivasan, U.2    Desvaux, M.3    Foxman, B.4    Marrs, C.F.5
  • 77
    • 34547857405 scopus 로고    scopus 로고
    • Autotransporter proteins: Novel targets at the bacterial cell surface
    • Wells TJ, Tree JJ, Ulett GC, Schembri MA (2007) Autotransporter proteins: novel targets at the bacterial cell surface. FEMS Microbiol Lett 274: 163-172.
    • (2007) FEMS Microbiol Lett , vol.274 , pp. 163-172
    • Wells, T.J.1    Tree, J.J.2    Ulett, G.C.3    Schembri, M.A.4
  • 79
    • 33846183762 scopus 로고    scopus 로고
    • Characterisation of YtfM, a second member of the Omp85 family in Escherichia coli
    • Stegmeier JF, Gluck A, Sukumaran S, Mantele W, Andersen C (2007) Characterisation of YtfM, a second member of the Omp85 family in Escherichia coli. Biol Chem 388: 37-46.
    • (2007) Biol Chem , vol.388 , pp. 37-46
    • Stegmeier, J.F.1    Gluck, A.2    Sukumaran, S.3    Mantele, W.4    Andersen, C.5
  • 80
    • 60749102331 scopus 로고    scopus 로고
    • Membrane protein architects: The role of the BAM complex in outer membrane protein assembly
    • Knowles TJ, Scott-Tucker A, Overduin M, Henderson IR (2009) Membrane protein architects: the role of the BAM complex in outer membrane protein assembly. Nat Rev Microbiol 7: 206-214.
    • (2009) Nat Rev Microbiol , vol.7 , pp. 206-214
    • Knowles, T.J.1    Scott-Tucker, A.2    Overduin, M.3    Henderson, I.R.4
  • 81
    • 43449107064 scopus 로고    scopus 로고
    • Fold and function of polypeptide transport-associated domains responsible for delivering unfolded proteins to membranes
    • Knowles TJ, Jeeves M, Bobat S, Dancea F, McClelland D, et al. (2008) Fold and function of polypeptide transport-associated domains responsible for delivering unfolded proteins to membranes. Mol Microbiol 68: 1216-1227.
    • (2008) Mol Microbiol , vol.68 , pp. 1216-1227
    • Knowles, T.J.1    Jeeves, M.2    Bobat, S.3    Dancea, F.4    McClelland, D.5
  • 83
    • 0037154255 scopus 로고    scopus 로고
    • A genome-scale analysis for identification of genes required for growth or survival of Haemophilus influenzae
    • Akerley BJ, Rubin EJ, Novick VL, Amaya K, Judson N, et al. (2002) A genome-scale analysis for identification of genes required for growth or survival of Haemophilus influenzae. Proc Natl Acad Sci U S A 99: 966-971.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 966-971
    • Akerley, B.J.1    Rubin, E.J.2    Novick, V.L.3    Amaya, K.4    Judson, N.5
  • 84
    • 33645504808 scopus 로고    scopus 로고
    • Genomic comparison of Escherichia coli K1 strains isolated from the cerebrospinal fluid of patients with meningitis
    • Yao Y, Xie Y, Kim KS (2006) Genomic comparison of Escherichia coli K1 strains isolated from the cerebrospinal fluid of patients with meningitis. Infect Immun 74: 2196-2206.
    • (2006) Infect Immun , vol.74 , pp. 2196-2206
    • Yao, Y.1    Xie, Y.2    Kim, K.S.3
  • 85
    • 2142751620 scopus 로고    scopus 로고
    • Proteus mirabilis genes that contribute to pathogenesis of urinary tract infection: Identification of 25 signature-tagged mutants attenuated at least 100-fold
    • Burall LS, Harro JM, Li X, Lockatell CV, Himpsl SD, et al. (2004) Proteus mirabilis genes that contribute to pathogenesis of urinary tract infection: identification of 25 signature-tagged mutants attenuated at least 100-fold. Infect Immun 72: 2922-2938.
    • (2004) Infect Immun , vol.72 , pp. 2922-2938
    • Burall, L.S.1    Harro, J.M.2    Li, X.3    Lockatell, C.V.4    Himpsl, S.D.5
  • 86
    • 44949154589 scopus 로고    scopus 로고
    • UpaG, a new member of the trimeric autotransporter family of adhesins in uropathogenic Escherichia coli
    • Valle J, Mabbett AN, Ulett GC, Toledo-Arana A, Wecker K, et al. (2008) UpaG, a new member of the trimeric autotransporter family of adhesins in uropathogenic Escherichia coli. J Bacteriol 190: 4147-4161.
    • (2008) J Bacteriol , vol.190 , pp. 4147-4161
    • Valle, J.1    Mabbett, A.N.2    Ulett, G.C.3    Toledo-Arana, A.4    Wecker, K.5
  • 87
    • 59849101362 scopus 로고    scopus 로고
    • The type VI secretion system: Translocation of effectors and effector-domains
    • Pukatzki S, McAuley SB, Miyata ST (2009) The type VI secretion system: translocation of effectors and effector-domains. Current Opinion in Microbiology 12: 11-17.
    • (2009) Current Opinion in Microbiology , vol.12 , pp. 11-17
    • Pukatzki, S.1    McAuley, S.B.2    Miyata, S.T.3
  • 88
    • 33747080208 scopus 로고    scopus 로고
    • Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli
    • Dudley EG, Thomson NR, Parkhill J, Morin NP, Nataro JP (2006) Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli. Mol Microbiol 61: 1267-1282.
    • (2006) Mol Microbiol , vol.61 , pp. 1267-1282
    • Dudley, E.G.1    Thomson, N.R.2    Parkhill, J.3    Morin, N.P.4    Nataro, J.P.5
  • 89
    • 59249089471 scopus 로고    scopus 로고
    • Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, et al. (2009) Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet 5: e1000344.
    • Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, et al. (2009) Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet 5: e1000344.
  • 90
    • 33748082663 scopus 로고    scopus 로고
    • How to become a uropathogen: Comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains
    • Brzuszkiewicz E, Brüggemann H, Liesegang H, Emmerth M, Ölschläger T, et al. (2006) How to become a uropathogen: Comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains. Proc Natl Acad Sci USA 103: 12879-12884.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 12879-12884
    • Brzuszkiewicz, E.1    Brüggemann, H.2    Liesegang, H.3    Emmerth, M.4    Ölschläger, T.5
  • 91
    • 33645827531 scopus 로고    scopus 로고
    • Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: A comparative genomics approach
    • Chen SL, Hung C-S, Xu J, Reigstad CS, Magrini V, et al. (2006) Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: A comparative genomics approach. Proc Natl Acad Sci U S A 103: 5977-5982.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 5977-5982
    • Chen, S.L.1    Hung, C.-S.2    Xu, J.3    Reigstad, C.S.4    Magrini, V.5
  • 92
    • 34247846229 scopus 로고    scopus 로고
    • The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes
    • Johnson TJ, Kariyawasam S, Wannemuehler Y, Mangiamele P, Johnson SJ, et al. (2007) The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes. J Bacteriol 189: 3228-3236.
    • (2007) J Bacteriol , vol.189 , pp. 3228-3236
    • Johnson, T.J.1    Kariyawasam, S.2    Wannemuehler, Y.3    Mangiamele, P.4    Johnson, S.J.5
  • 93
    • 33744974779 scopus 로고    scopus 로고
    • A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus
    • Mougous J, Cuff M, Raunser S, Shen A, Zhou M, et al. (2006) A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Science 312: 1526-1530.
    • (2006) Science , vol.312 , pp. 1526-1530
    • Mougous, J.1    Cuff, M.2    Raunser, S.3    Shen, A.4    Zhou, M.5
  • 94
    • 0035145396 scopus 로고    scopus 로고
    • Plasmid-encoded toxin of enteroaggregative Escherichia coli is internalized by epithelial cells
    • Navarro-Garcia F, Canizalez-Roman A, Luna J, Sears C, Nataro JP (2001) Plasmid-encoded toxin of enteroaggregative Escherichia coli is internalized by epithelial cells. Infect Immun 69: 1053-1060.
    • (2001) Infect Immun , vol.69 , pp. 1053-1060
    • Navarro-Garcia, F.1    Canizalez-Roman, A.2    Luna, J.3    Sears, C.4    Nataro, J.P.5
  • 95
    • 0033801659 scopus 로고    scopus 로고
    • Pet toxin from enteroaggregative Escherichia coli produces cellular damage associated with fodrin disruption
    • Villaseca JM, Navarro-Garcia F, Mendoza-Hernandez G, Nataro JP, Cravioto A, et al. (2000) Pet toxin from enteroaggregative Escherichia coli produces cellular damage associated with fodrin disruption. Infect Immun 68: 5920-5927.
    • (2000) Infect Immun , vol.68 , pp. 5920-5927
    • Villaseca, J.M.1    Navarro-Garcia, F.2    Mendoza-Hernandez, G.3    Nataro, J.P.4    Cravioto, A.5
  • 96
    • 0027407951 scopus 로고
    • Enteroaggregative Escherichia coli heat-stable enterotoxin 1 represents another subfamily of E. coli heat-stable toxin
    • Savarino SJ, Fasano A, Watson J, Martin BM, Levine MM, et al. (1993) Enteroaggregative Escherichia coli heat-stable enterotoxin 1 represents another subfamily of E. coli heat-stable toxin. Proc Natl Acad Sci U S A 90: 3093-3097.
    • (1993) Proc Natl Acad Sci U S A , vol.90 , pp. 3093-3097
    • Savarino, S.J.1    Fasano, A.2    Watson, J.3    Martin, B.M.4    Levine, M.M.5
  • 97
    • 0842267074 scopus 로고    scopus 로고
    • Expression, purification, and biochemical characterization of enteroaggregative Escherichia coli heat-stable enterotoxin 1
    • Menard LP, Lussier JG, Lepine F, Paiva de Sousa C, Dubreuil JD (2004) Expression, purification, and biochemical characterization of enteroaggregative Escherichia coli heat-stable enterotoxin 1. Protein Expr Purif 33: 223-231.
    • (2004) Protein Expr Purif , vol.33 , pp. 223-231
    • Menard, L.P.1    Lussier, J.G.2    Lepine, F.3    Paiva de Sousa, C.4    Dubreuil, J.D.5
  • 98
    • 66649132042 scopus 로고    scopus 로고
    • The structure of a cytolytic alpha-helical toxin pore reveals its assembly mechanism
    • Mueller M, Grauschopf U, Maier T, Glockshuber R, Ban N (2009) The structure of a cytolytic alpha-helical toxin pore reveals its assembly mechanism. Nature 459: 726-730.
    • (2009) Nature , vol.459 , pp. 726-730
    • Mueller, M.1    Grauschopf, U.2    Maier, T.3    Glockshuber, R.4    Ban, N.5
  • 99
    • 35448991375 scopus 로고    scopus 로고
    • Alternate SlyA and H-NS nucleoprotein complexes control hlyE expression in Escherichia coli K-12
    • Lithgow JK, Haider F, Roberts IS, Green J (2007) Alternate SlyA and H-NS nucleoprotein complexes control hlyE expression in Escherichia coli K-12. Mol Microbiol 66: 685-698.
    • (2007) Mol Microbiol , vol.66 , pp. 685-698
    • Lithgow, J.K.1    Haider, F.2    Roberts, I.S.3    Green, J.4
  • 100
    • 33750475603 scopus 로고    scopus 로고
    • Serologic evidence for effective production of cytolysin A in Salmonella enterica serovars typhi and paratyphi A during human infection
    • von Rhein C, Hunfeld KP, Ludwig A (2006) Serologic evidence for effective production of cytolysin A in Salmonella enterica serovars typhi and paratyphi A during human infection. Infect Immun 74: 6505-6508.
    • (2006) Infect Immun , vol.74 , pp. 6505-6508
    • von Rhein, C.1    Hunfeld, K.P.2    Ludwig, A.3
  • 101
    • 51349147187 scopus 로고    scopus 로고
    • Occurrence and characteristics of the cytolysin A gene in Shigella strains and other members of the family Enterobacteriaceae
    • von Rhein C, Bauer S, Simon V, Ludwig A (2008) Occurrence and characteristics of the cytolysin A gene in Shigella strains and other members of the family Enterobacteriaceae. FEMS Microbiol Lett 287: 143-148.
    • (2008) FEMS Microbiol Lett , vol.287 , pp. 143-148
    • von Rhein, C.1    Bauer, S.2    Simon, V.3    Ludwig, A.4
  • 102
    • 0033022996 scopus 로고    scopus 로고
    • Structure, assembly and regulation of expression of capsules in Escherichia coli
    • Whitfield C, Roberts IS (1999) Structure, assembly and regulation of expression of capsules in Escherichia coli. Mol Microbiol 31: 1307-1319.
    • (1999) Mol Microbiol , vol.31 , pp. 1307-1319
    • Whitfield, C.1    Roberts, I.S.2
  • 103
    • 0025084040 scopus 로고
    • Molecular analysis of the Escherichia coli K5 kps locus: Identification and characterization of an inner-membrane capsular polysaccharide transport system
    • Smith AN, Boulnois GJ, Roberts IS (1990) Molecular analysis of the Escherichia coli K5 kps locus: identification and characterization of an inner-membrane capsular polysaccharide transport system. Mol Microbiol 4: 1863-1869.
    • (1990) Mol Microbiol , vol.4 , pp. 1863-1869
    • Smith, A.N.1    Boulnois, G.J.2    Roberts, I.S.3
  • 104
    • 47049106441 scopus 로고    scopus 로고
    • Differential regulation by magnesium of the two MsbB paralogs of Shigella flexneri
    • Goldman SR, Tu Y, Goldberg MB (2008) Differential regulation by magnesium of the two MsbB paralogs of Shigella flexneri. J Bacteriol 190: 3526-3537.
    • (2008) J Bacteriol , vol.190 , pp. 3526-3537
    • Goldman, S.R.1    Tu, Y.2    Goldberg, M.B.3
  • 105
    • 43349093477 scopus 로고    scopus 로고
    • The shf gene of a Shigella flexneri homologue on the virulent plasmid pAA2 of enteroaggregative Escherichia coli 042 is required for firm biofilm formation
    • Fujiyama R, Nishi J, Imuta N, Tokuda K, Manago K, et al. (2008) The shf gene of a Shigella flexneri homologue on the virulent plasmid pAA2 of enteroaggregative Escherichia coli 042 is required for firm biofilm formation. Curr Microbiol 56: 474-480.
    • (2008) Curr Microbiol , vol.56 , pp. 474-480
    • Fujiyama, R.1    Nishi, J.2    Imuta, N.3    Tokuda, K.4    Manago, K.5
  • 106
    • 33749515943 scopus 로고    scopus 로고
    • An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination
    • Tobe T, Beatson SA, Taniguchi H, Abe H, Bailey CM, et al. (2006) An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination. Proc Natl Acad Sci U S A 103: 14941-14946.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 14941-14946
    • Tobe, T.1    Beatson, S.A.2    Taniguchi, H.3    Abe, H.4    Bailey, C.M.5
  • 108
    • 25444524604 scopus 로고    scopus 로고
    • Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: Implications for the microbial "pan-genome
    • Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, et al. (2005) Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome". Proc Natl Acad Sci U S A 102: 13950-13955.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 13950-13955
    • Tettelin, H.1    Masignani, V.2    Cieslewicz, M.J.3    Donati, C.4    Medini, D.5
  • 109
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 110
    • 0028168856 scopus 로고
    • A codon-based model of nucleotide substitution for protein-coding DNA sequences
    • Goldman N, Yang Z (1994) A codon-based model of nucleotide substitution for protein-coding DNA sequences. Mol Biol Evol 11: 725-736.
    • (1994) Mol Biol Evol , vol.11 , pp. 725-736
    • Goldman, N.1    Yang, Z.2
  • 111
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: Phylogenetic analysis by maximum likelihood
    • Yang Z (2007) PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol 24: 1586-1591.
    • (2007) Mol Biol Evol , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 112
    • 0030807655 scopus 로고    scopus 로고
    • BIONJ: An improved version of the NJ algorithm based on a simple model of sequence data
    • Gascuel O (1997) BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data. Mol Biol Evol 14: 685-695.
    • (1997) Mol Biol Evol , vol.14 , pp. 685-695
    • Gascuel, O.1
  • 113
    • 44949172578 scopus 로고    scopus 로고
    • The Escherichia coli biofilm-promoting protein Antigen 43 does not contribute to intestinal colonization
    • de Luna MG, Scott-Tucker A, Desvaux M, Ferguson P, Morin NP, et al. (2008) The Escherichia coli biofilm-promoting protein Antigen 43 does not contribute to intestinal colonization. FEMS Microbiol Lett 284: 237-246.
    • (2008) FEMS Microbiol Lett , vol.284 , pp. 237-246
    • de Luna, M.G.1    Scott-Tucker, A.2    Desvaux, M.3    Ferguson, P.4    Morin, N.P.5
  • 114
    • 0034924241 scopus 로고    scopus 로고
    • Determination of minimum inhibitory concentrations
    • Andrews J (2001) Determination of minimum inhibitory concentrations. J Antimicrob Chemother 48 Suppl 1: 5-16.
    • (2001) J Antimicrob Chemother , vol.48 , Issue.SUPPL. 1 , pp. 5-16
    • Andrews, J.1
  • 116
    • 0034911878 scopus 로고    scopus 로고
    • Phenotype microarrays for high-throughput phenotypic testing and assay of gene function
    • Bochner BR, Gadzinski P, Panomitros E (2001) Phenotype microarrays for high-throughput phenotypic testing and assay of gene function. Genome Res 11: 1246-1255.
    • (2001) Genome Res , vol.11 , pp. 1246-1255
    • Bochner, B.R.1    Gadzinski, P.2    Panomitros, E.3
  • 117
    • 0043032929 scopus 로고    scopus 로고
    • Phenotype microarray analysis of Escherichia coli K-12 mutants with deletions of all two-component systems
    • Zhou L, Lei XH, Bochner BR, Wanner BL (2003) Phenotype microarray analysis of Escherichia coli K-12 mutants with deletions of all two-component systems. J Bacteriol 185: 4956-4972.
    • (2003) J Bacteriol , vol.185 , pp. 4956-4972
    • Zhou, L.1    Lei, X.H.2    Bochner, B.R.3    Wanner, B.L.4


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