A systematic study of normalization methods for Infinium 450K methylation data using whole-genome bisulfite sequencing data

Epigenetics

Volumn 10, Issue 7, 2015, Pages 662-669

  Wang, Ting ^a   Guan, Weihua ^b   Lin, Jerome ^c   Boutaoui, Nadia ^a   Canino, Glorisa ^d   Luo, Jianhua ^e   Celedón, Juan Carlos ^a   Chen, Wei ^a,c  

^a CHILDREN S HOSPITAL OF PITTSBURGH   (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

^c UNIVERSITY OF PITTSBURGH GRADUATE SCHOOL OF PUBLIC HEALTH   (United States)

^d UNIVERSITY OF PUERTO RICO   (Puerto Rico)

^e UNIVERSITY OF PITTSBURGH SCHOOL OF MEDICINE   (United States)

Author keywords

DNA methylation; Epigenetics; Illumina 450K; Microarray; Normalization; Whole genome bisulfite sequencing (WGBS)

Indexed keywords

BISULFITE; HYDROGEN SULFITE; SULFITE;

ARTICLE; COMPARATIVE STUDY; DNA FRAGMENTATION; DNA METHYLATION; DNA METHYLATION ASSAY; FLUORESCENCE; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC ASSOCIATION; GENETIC VARIABILITY; HUMAN; ILLUMINA INFINIUM HUMAN METHYLATION 450; CHEMISTRY; CPG ISLAND; GENOME-WIDE ASSOCIATION STUDY; HIGH THROUGHPUT SEQUENCING; HUMAN GENOME; LEUKOCYTE; MATHEMATICAL PHENOMENA; METABOLISM; PROCEDURES;

CPG ISLANDS; DNA METHYLATION; GENOME, HUMAN; GENOME-WIDE ASSOCIATION STUDY; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; LEUKOCYTES; MATHEMATICAL CONCEPTS; SULFITES;

EID: 84943756057     PISSN: 15592294     EISSN: 15592308     Source Type: Journal    
DOI: 10.1080/15592294.2015.1057384     Document Type: Article

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