메뉴 건너뛰기




Volumn 1343, Issue , 2015, Pages 249-264

Analysis of DNA methylation by pyrosequencing

Author keywords

Assay design; Biomarker detection; Bisulfide conversation; DNA CpG methylation; Global methylation; Pyrosequencing technique; SNPs

Indexed keywords

BIOLOGICAL MARKER; BISULFITE; GENOMIC DNA;

EID: 84942848443     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-2963-4_19     Document Type: Chapter
Times cited : (82)

References (24)
  • 1
    • 77957970301 scopus 로고    scopus 로고
    • Epigenetic modifi cations and human disease
    • Portela A, Esteller M (2010) Epigenetic modifi cations and human disease. Nat Biotechnol 28:1057-1068
    • (2010) Nat Biotechnol , vol.28 , pp. 1057-1068
    • Portela, A.1    Esteller, M.2
  • 2
    • 0242584454 scopus 로고    scopus 로고
    • Chromosomal instability and tumors promoted by DNA hypomethylation
    • Eden A, Gaudet F, Waghmare A et al (2003) Chromosomal instability and tumors promoted by DNA hypomethylation. Science 300:455
    • (2003) Science , vol.300
    • Eden, A.1    Gaudet, F.2    Waghmare, A.3
  • 3
    • 56649115881 scopus 로고    scopus 로고
    • Epigenetic regulation of telomeres in human cancer
    • Vera E, Canela A, Fraga MF et al (2008) Epigenetic regulation of telomeres in human cancer. Oncogene 27:6817-6833
    • (2008) Oncogene , vol.27 , pp. 6817-6833
    • Vera, E.1    Canela, A.2    Fraga, M.F.3
  • 4
    • 0037372003 scopus 로고    scopus 로고
    • Epigenetic regulation of gene expression: How the genome integrates intrinsic and environmental signals
    • Jaenisch R, Bird A (2003) Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals. Nat Genet 33 Suppl:245-254
    • (2003) Nat Genet , vol.33 , pp. 245-254
    • Jaenisch, R.1    Bird, A.2
  • 5
    • 33744936286 scopus 로고    scopus 로고
    • The epigenetic face of systemic lupus erythematosus
    • Ballestar E, Esteller M, Richardson BC (2006) The epigenetic face of systemic lupus erythematosus. J Immunol 176:7143-7147
    • (2006) J Immunol , vol.176 , pp. 7143-7147
    • Ballestar, E.1    Esteller, M.2    Richardson, B.C.3
  • 7
    • 77953825565 scopus 로고    scopus 로고
    • DNA methylation as a biomarker for cardiovascular disease risk
    • Kim M, Long TI, Arakawa K et al (2010) DNA methylation as a biomarker for cardiovascular disease risk. PLoS One 5, e9692
    • (2010) Plos One , vol.5
    • Kim, M.1    Long, T.I.2    Arakawa, K.3
  • 8
    • 3142672297 scopus 로고    scopus 로고
    • DNA methylation polymorphisms precede any histological sign of atherosclerosis in mice lacking apolipoprotein
    • Lund G, Andersson L, Lauria M et al (2004) DNA methylation polymorphisms precede any histological sign of atherosclerosis in mice lacking apolipoprotein E. J Biol Chem 279: 29147-29154
    • (2004) E. J Biol Chem , vol.279 , pp. 29147-29154
    • Lund, G.1    Ersson, L.2    Lauria, M.3
  • 9
    • 33847065486 scopus 로고    scopus 로고
    • The epigenomics of cancer
    • Jones PA, Baylin SB (2007) The epigenomics of cancer. Cell 128:683-692
    • (2007) Cell , vol.128 , pp. 683-692
    • Jones, P.A.1    Baylin, S.B.2
  • 10
    • 0034523641 scopus 로고    scopus 로고
    • Cytosine methylation and human cancer
    • Warnecke PM, Bestor TH (2000) Cytosine methylation and human cancer. Curr Opin Oncol 12:68-73
    • (2000) Curr Opin Oncol , vol.12 , pp. 68-73
    • Warnecke, P.M.1    Bestor, T.H.2
  • 11
    • 70449725209 scopus 로고    scopus 로고
    • Epigenetic mechanisms in neurological diseases: Genes, syndromes, and therapies
    • Urdinguio RG, Sanchez-Mut JV, Esteller M (2009) Epigenetic mechanisms in neurological diseases: genes, syndromes, and therapies. Lancet Neurol 8:1056-1072
    • (2009) Lancet Neurol , vol.8 , pp. 1056-1072
    • Urdinguio, R.G.1    Sanchez-Mut, J.V.2    Esteller, M.3
  • 12
    • 84858753280 scopus 로고    scopus 로고
    • Environmental exposure, estrogen and two X chromosomes are required for disease development in an epigenetic model of lupus
    • Strickland FM, Hewagama A, Lu Q et al (2012) Environmental exposure, estrogen and two X chromosomes are required for disease development in an epigenetic model of lupus. J Autoimmun 38:J135-J143
    • (2012) J Autoimmun , vol.38 , pp. J135-J143
    • Strickland, F.M.1    Hewagama, A.2    Lu, Q.3
  • 13
    • 0032540905 scopus 로고    scopus 로고
    • A sequencing method based on real-time pyrophosphate
    • Ronaghi M, Uhlen M, Nyren P (1998) A sequencing method based on real-time pyrophosphate. Science 281:363-365
    • (1998) Science , vol.281 , pp. 363-365
    • Ronaghi, M.1    Uhlen, M.2    Nyren, P.3
  • 14
    • 49649107703 scopus 로고    scopus 로고
    • DNA methylation controls Foxp3 gene expression
    • Polansky JK, Kretschmer K, Freyer J et al (2008) DNA methylation controls Foxp3 gene expression. Eur J Immunol 38:1654-1663
    • (2008) Eur J Immunol , vol.38 , pp. 1654-1663
    • Polansky, J.K.1    Kretschmer, K.2    Freyer, J.3
  • 15
    • 33846980131 scopus 로고    scopus 로고
    • Epigenetic control of the foxp3 locus in regulatory T cells
    • Floess S, Freyer J, Siewert C et al (2007) Epigenetic control of the foxp3 locus in regulatory T cells. PLoS Biol 5, e38
    • (2007) Plos Biol , vol.5
    • Floess, S.1    Freyer, J.2    Siewert, C.3
  • 16
    • 34250773899 scopus 로고    scopus 로고
    • Comprehensive epigenetic profi ling identifi es multiple distal regulatory elements directing transcription of the gene encoding interferon-gamma
    • Schoenborn JR, Dorschner MO, Sekimata M et al (2007) Comprehensive epigenetic profi ling identifi es multiple distal regulatory elements directing transcription of the gene encoding interferon-gamma. Nat Immunol 8:732-742
    • (2007) Nat Immunol , vol.8 , pp. 732-742
    • Schoenborn, J.R.1    Dorschner, M.O.2    Sekimata, M.3
  • 17
    • 2342557977 scopus 로고    scopus 로고
    • A simple method for estimating global DNA methylation using bisulfi te PCR of repetitive DNA elements
    • Yang AS, Estecio MR, Doshi K et al (2004) A simple method for estimating global DNA methylation using bisulfi te PCR of repetitive DNA elements. Nucleic Acids Res 32, e38
    • (2004) Nucleic Acids Res , vol.32
    • Yang, A.S.1    Estecio, M.R.2    Doshi, K.3
  • 18
    • 24044479394 scopus 로고    scopus 로고
    • Estimating the total mouse DNA methylation according to the B1 repetitive elements
    • Jeong KS, Lee S (2005) Estimating the total mouse DNA methylation according to the B1 repetitive elements. Biochem Biophys Res Commun 335:1211-1216
    • (2005) Biochem Biophys Res Commun , vol.335 , pp. 1211-1216
    • Jeong, K.S.1    Lee, S.2
  • 19
    • 84863554447 scopus 로고    scopus 로고
    • Maternal micronutrient supplementation suppresses T cell chemokine receptor expression and function in f1 mice
    • Delaney C, Hoeltzel M, Garg SK et al (2012) Maternal micronutrient supplementation suppresses T cell chemokine receptor expression and function in f1 mice. J Nutr 142: 1329-1335
    • (2012) J Nutr , vol.142 , pp. 1329-1335
    • Delaney, C.1    Hoeltzel, M.2    Garg, S.K.3
  • 20
    • 33645778580 scopus 로고    scopus 로고
    • Pyrosequencing protocol requiring a unique biotinylated primer
    • Royo JL, Pascual MH, Salinas A et al (2006) Pyrosequencing protocol requiring a unique biotinylated primer. Clin Chem Lab Med 44: 435-441
    • (2006) Clin Chem Lab Med , vol.44 , pp. 435-441
    • Royo, J.L.1    Pascual, M.H.2    Salinas, A.3
  • 21
    • 33744918070 scopus 로고    scopus 로고
    • DNA methylation changes after 5-aza-2’- deoxycytidine therapy in patients with leukemia
    • Yang AS, Doshi KD, Choi SW et al (2006) DNA methylation changes after 5-aza-2’- deoxycytidine therapy in patients with leukemia. Cancer Res 66:5495-5503
    • (2006) Cancer Res , vol.66 , pp. 5495-5503
    • Yang, A.S.1    Doshi, K.D.2    Choi, S.W.3
  • 22
    • 33847026146 scopus 로고    scopus 로고
    • Changes in DNA methylation patterns in subjects exposed to low-dose benzene
    • Bollati V, Baccarelli A, Hou L et al (2007) Changes in DNA methylation patterns in subjects exposed to low-dose benzene. Cancer Res 67:876-880
    • (2007) Cancer Res , vol.67 , pp. 876-880
    • Bollati, V.1    Baccarelli, A.2    Hou, L.3
  • 23
    • 60849100524 scopus 로고    scopus 로고
    • Decline in genomic DNA methylation through aging in a cohort of elderly subjects
    • Bollati V, Schwartz J, Wright R et al (2009) Decline in genomic DNA methylation through aging in a cohort of elderly subjects. Mech Ageing Dev 130:234-239
    • (2009) Mech Ageing Dev , vol.130 , pp. 234-239
    • Bollati, V.1    Schwartz, J.2    Wright, R.3
  • 24
    • 65249142729 scopus 로고    scopus 로고
    • Rapid DNA methylation changes after exposure to traffi c particles
    • Baccarelli A, Wright RO, Bollati V et al (2009) Rapid DNA methylation changes after exposure to traffi c particles. Am J Respir Crit Care Med 179:572-578
    • (2009) Am J Respir Crit Care Med , vol.179 , pp. 572-578
    • Baccarelli, A.1    Wright, R.O.2    Bollati, V.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.