-
1
-
-
23944475626
-
Mechanisms of, and barriers to, horizontal gene transfer between bacteria
-
Thomas CM, Nielsen KM (2005) Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat Rev Microbiol 3(9):711-721.
-
(2005)
Nat Rev Microbiol
, vol.3
, Issue.9
, pp. 711-721
-
-
Thomas, C.M.1
Nielsen, K.M.2
-
2
-
-
67949083649
-
Competition favours reduced cost of plasmids to host bacteria
-
Haft RJ, Mittler JE, Traxler B (2009) Competition favours reduced cost of plasmids to host bacteria. ISME J 3(7):761-769.
-
(2009)
ISME J
, vol.3
, Issue.7
, pp. 761-769
-
-
Haft, R.J.1
Mittler, J.E.2
Traxler, B.3
-
3
-
-
84875737333
-
Salmonella enterica serovar Typhimurium skills to succeed in the host: Virulence and regulation
-
Fàbrega A, Vila J (2013) Salmonella enterica serovar Typhimurium skills to succeed in the host: Virulence and regulation. Clin Microbiol Rev 26(2):308-341.
-
(2013)
Clin Microbiol Rev
, vol.26
, Issue.2
, pp. 308-341
-
-
Fàbrega, A.1
Vila, J.2
-
4
-
-
84864798613
-
Relaxosome function and conjugation regulation in F-like plasmids - A structural biology perspective
-
Wong JJ, Lu J, Glover JN (2012) Relaxosome function and conjugation regulation in F-like plasmids - a structural biology perspective. Mol Microbiol 85(4):602-617.
-
(2012)
Mol Microbiol
, vol.85
, Issue.4
, pp. 602-617
-
-
Wong, J.J.1
Lu, J.2
Glover, J.N.3
-
5
-
-
0347504844
-
FinO is an RNA chaperone that facilitates sense-antisense RNA interactions
-
Arthur DC, et al. (2003) FinO is an RNA chaperone that facilitates sense-antisense RNA interactions. EMBO J 22(23):6346-6355.
-
(2003)
EMBO J
, vol.22
, Issue.23
, pp. 6346-6355
-
-
Arthur, D.C.1
-
6
-
-
84910072410
-
Social behavior and decision making in bacterial conjugation
-
Koraimann G, Wagner MA (2014) Social behavior and decision making in bacterial conjugation. Front Cell Infect Microbiol 4:54.
-
(2014)
Front Cell Infect Microbiol
, vol.4
, pp. 54
-
-
Koraimann, G.1
Wagner, M.A.2
-
7
-
-
77954746762
-
Regulation of bacterial conjugation in microaerobiosis by host-encoded functions ArcAB and sdhABCD
-
Serna A, Espinosa E, Camacho EM, Casadesús J (2010) Regulation of bacterial conjugation in microaerobiosis by host-encoded functions ArcAB and sdhABCD. Genetics 184(4):947-958.
-
(2010)
Genetics
, vol.184
, Issue.4
, pp. 947-958
-
-
Serna, A.1
Espinosa, E.2
Camacho, E.M.3
Casadesús, J.4
-
8
-
-
0036016823
-
Conjugal transfer of the virulence plasmid of Salmonella enterica is regulated by the leucine-responsive regulatory protein and DNA adenine methylation
-
Camacho EM, Casadesús J (2002) Conjugal transfer of the virulence plasmid of Salmonella enterica is regulated by the leucine-responsive regulatory protein and DNA adenine methylation. Mol Microbiol 44(6):1589-1598.
-
(2002)
Mol Microbiol
, vol.44
, Issue.6
, pp. 1589-1598
-
-
Camacho, E.M.1
Casadesús, J.2
-
9
-
-
40449131944
-
Conjugal transfer of the Salmonella enterica virulence plasmid in the mouse intestine
-
García-Quintanilla M, Ramos-Morales F, Casadesús J (2008) Conjugal transfer of the Salmonella enterica virulence plasmid in the mouse intestine. J Bacteriol 190(6):1922-1927.
-
(2008)
J Bacteriol
, vol.190
, Issue.6
, pp. 1922-1927
-
-
García-Quintanilla, M.1
Ramos-Morales, F.2
Casadesús, J.3
-
10
-
-
33751099309
-
Bile-induced curing of the virulence plasmid in Salmonella enterica serovar Typhimurium
-
García-Quintanilla M, Prieto AI, Barnes L, Ramos-Morales F, Casadesús J (2006) Bile-induced curing of the virulence plasmid in Salmonella enterica serovar Typhimurium. J Bacteriol 188(22):7963-7965.
-
(2006)
J Bacteriol
, vol.188
, Issue.22
, pp. 7963-7965
-
-
García-Quintanilla, M.1
Prieto, A.I.2
Barnes, L.3
Ramos-Morales, F.4
Casadesús, J.5
-
11
-
-
84863924309
-
Bacterial small RNA regulators: Versatile roles and rapidly evolving variations
-
pii: a003798
-
Gottesman S, Storz G (2010) Bacterial small RNA regulators: Versatile roles and rapidly evolving variations. Cold Spring Harb Perspect Biol 3(12)pii: a003798.
-
(2010)
Cold Spring Harb Perspect Biol
, vol.3
, Issue.12
-
-
Gottesman, S.1
Storz, G.2
-
12
-
-
84939502874
-
Target activation by regulatory RNAs in bacteria
-
Papenfort K, Vanderpool CK (2015) Target activation by regulatory RNAs in bacteria. FEMS Microbiol Rev 39(3):362-378.
-
(2015)
FEMS Microbiol Rev
, vol.39
, Issue.3
, pp. 362-378
-
-
Papenfort, K.1
Vanderpool, C.K.2
-
13
-
-
84875457350
-
Bacterial small RNA-based negative regulation: Hfq and its accomplices
-
De Lay N, Schu DJ, Gottesman S (2013) Bacterial small RNA-based negative regulation: Hfq and its accomplices. J Biol Chem 288(12):7996-8003.
-
(2013)
J Biol Chem
, vol.288
, Issue.12
, pp. 7996-8003
-
-
De Lay, N.1
Schu, D.J.2
Gottesman, S.3
-
14
-
-
79960433506
-
Hfq and its constellation of RNA
-
Vogel J, Luisi BF (2011) Hfq and its constellation of RNA. Nat Rev Microbiol 9(8):578-589.
-
(2011)
Nat Rev Microbiol
, vol.9
, Issue.8
, pp. 578-589
-
-
Vogel, J.1
Luisi, B.F.2
-
15
-
-
33644909105
-
Hfq is a regulator of F-plasmid TraJ and TraM synthesis in Escherichia coli
-
Will WR, Frost LS (2006) Hfq is a regulator of F-plasmid TraJ and TraM synthesis in Escherichia coli. J Bacteriol 188(1):124-131.
-
(2006)
J Bacteriol
, vol.188
, Issue.1
, pp. 124-131
-
-
Will, W.R.1
Frost, L.S.2
-
16
-
-
80053226878
-
The RpoS-mediated general stress response in Escherichia coli
-
Battesti A, Majdalani N, Gottesman S (2011) The RpoS-mediated general stress response in Escherichia coli. Annu Rev Microbiol 65:189-213.
-
(2011)
Annu Rev Microbiol
, vol.65
, pp. 189-213
-
-
Battesti, A.1
Majdalani, N.2
Gottesman, S.3
-
17
-
-
84906330407
-
Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coli
-
Mika F, Hengge R (2014) Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coli. RNA Biol 11(5):494-507.
-
(2014)
RNA Biol
, vol.11
, Issue.5
, pp. 494-507
-
-
Mika, F.1
Hengge, R.2
-
18
-
-
70350176597
-
Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA
-
Papenfort K, et al. (2009) Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA. Mol Microbiol 74(1):139-158.
-
(2009)
Mol Microbiol
, vol.74
, Issue.1
, pp. 139-158
-
-
Papenfort, K.1
-
19
-
-
77953090678
-
Positive regulation by small RNAs and the role of Hfq
-
Soper T, Mandin P, Majdalani N, Gottesman S, Woodson SA (2010) Positive regulation by small RNAs and the role of Hfq. Proc Natl Acad Sci USA 107(21):9602-9607.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.21
, pp. 9602-9607
-
-
Soper, T.1
Mandin, P.2
Majdalani, N.3
Gottesman, S.4
Woodson, S.A.5
-
20
-
-
0035100582
-
Regulation of RpoS by a novel small RNA: The characterization of RprA
-
Majdalani N, Chen S, Murrow J, St John K, Gottesman S (2001) Regulation of RpoS by a novel small RNA: The characterization of RprA. Mol Microbiol 39(5):1382-1394.
-
(2001)
Mol Microbiol
, vol.39
, Issue.5
, pp. 1382-1394
-
-
Majdalani, N.1
Chen, S.2
Murrow, J.3
St John, K.4
Gottesman, S.5
-
21
-
-
0036437019
-
Regulation and mode of action of the second small RNA activator of RpoS translation, RprA
-
Majdalani N, Hernandez D, Gottesman S (2002) Regulation and mode of action of the second small RNA activator of RpoS translation, RprA. Mol Microbiol 46(3):813-826.
-
(2002)
Mol Microbiol
, vol.46
, Issue.3
, pp. 813-826
-
-
Majdalani, N.1
Hernandez, D.2
Gottesman, S.3
-
22
-
-
84914147142
-
The Cpx envelope stress response regulates and is regulated by small noncoding RNAs
-
Vogt SL, Evans AD, Guest RL, Raivio TL (2014) The Cpx envelope stress response regulates and is regulated by small noncoding RNAs. J Bacteriol 196(24):4229-4238.
-
(2014)
J Bacteriol
, vol.196
, Issue.24
, pp. 4229-4238
-
-
Vogt, S.L.1
Evans, A.D.2
Guest, R.L.3
Raivio, T.L.4
-
23
-
-
25144451503
-
The Rcs phosphorelay: A complex signal transduction system
-
Majdalani N, Gottesman S (2005) The Rcs phosphorelay: A complex signal transduction system. Annu Rev Microbiol 59:379-405.
-
(2005)
Annu Rev Microbiol
, vol.59
, pp. 379-405
-
-
Majdalani, N.1
Gottesman, S.2
-
24
-
-
83055178971
-
Just scratching the surface: An expanding view of the Cpx envelope stress response
-
Vogt SL, Raivio TL (2012) Just scratching the surface: An expanding view of the Cpx envelope stress response. FEMS Microbiol Lett 326(1):2-11.
-
(2012)
FEMS Microbiol Lett
, vol.326
, Issue.1
, pp. 2-11
-
-
Vogt, S.L.1
Raivio, T.L.2
-
25
-
-
78049423172
-
Turn-over of the small non-coding RNA RprA in E. coli is influenced by osmolarity
-
Madhugiri R, Basineni SR, Klug G (2010) Turn-over of the small non-coding RNA RprA in E. coli is influenced by osmolarity. Mol Genet Genomics 284(4):307-318.
-
(2010)
Mol Genet Genomics
, vol.284
, Issue.4
, pp. 307-318
-
-
Madhugiri, R.1
Basineni, S.R.2
Klug, G.3
-
26
-
-
54849408366
-
Effect of Hfq on RprA-rpoS mRNA pairing: Hfq-RNA binding and the influence of the 5′ rpoS mRNA leader region
-
Updegrove T, Wilf N, Sun X, Wartell RM (2008) Effect of Hfq on RprA-rpoS mRNA pairing: Hfq-RNA binding and the influence of the 5′ rpoS mRNA leader region. Biochemistry 47(43):11184-11195.
-
(2008)
Biochemistry
, vol.47
, Issue.43
, pp. 11184-11195
-
-
Updegrove, T.1
Wilf, N.2
Sun, X.3
Wartell, R.M.4
-
27
-
-
33745900506
-
Limited role for the DsrA and RprA regulatory RNAs in rpoS regulation in Salmonella enterica
-
Jones AM, Goodwill A, Elliott T (2006) Limited role for the DsrA and RprA regulatory RNAs in rpoS regulation in Salmonella enterica. J Bacteriol 188(14):5077-5088.
-
(2006)
J Bacteriol
, vol.188
, Issue.14
, pp. 5077-5088
-
-
Jones, A.M.1
Goodwill, A.2
Elliott, T.3
-
28
-
-
84860742976
-
The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium
-
Kröger C, et al. (2012) The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium. Proc Natl Acad Sci USA 109(20):E1277-E1286.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.20
, pp. E1277-E1286
-
-
Kröger, C.1
-
29
-
-
50649097486
-
The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA
-
Soper TJ, Woodson SA (2008) The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA. RNA 14(9):1907-1917.
-
(2008)
RNA
, vol.14
, Issue.9
, pp. 1907-1917
-
-
Soper, T.J.1
Woodson, S.A.2
-
30
-
-
0035954304
-
Novel small RNA-encoding genes in the intergenic regions of Escherichia coli
-
Argaman L, et al. (2001) Novel small RNA-encoding genes in the intergenic regions of Escherichia coli. Curr Biol 11(12):941-950.
-
(2001)
Curr Biol
, vol.11
, Issue.12
, pp. 941-950
-
-
Argaman, L.1
-
31
-
-
84867577054
-
An atlas of Hfq-bound transcripts reveals 3′ UTRs as a genomic reservoir of regulatory small RNAs
-
Chao Y, Papenfort K, Reinhardt R, Sharma CM, Vogel J (2012) An atlas of Hfq-bound transcripts reveals 3′ UTRs as a genomic reservoir of regulatory small RNAs. EMBO J 31(20):4005-4019.
-
(2012)
EMBO J
, vol.31
, Issue.20
, pp. 4005-4019
-
-
Chao, Y.1
Papenfort, K.2
Reinhardt, R.3
Sharma, C.M.4
Vogel, J.5
-
32
-
-
50849105413
-
Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
-
Sittka A, et al. (2008) Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq. PLoS Genet 4(8):e1000163.
-
(2008)
PLoS Genet
, vol.4
, Issue.8
, pp. e1000163
-
-
Sittka, A.1
-
33
-
-
33751383274
-
SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay
-
Papenfort K, et al. (2006) SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay. Mol Microbiol 62(6):1674-1688.
-
(2006)
Mol Microbiol
, vol.62
, Issue.6
, pp. 1674-1688
-
-
Papenfort, K.1
-
34
-
-
78049365859
-
Mechanism of positive regulation by DsrA and RprA small noncoding RNAs: Pairing increases translation and protects rpoS mRNA from degradation
-
McCullen CA, Benhammou JN, Majdalani N, Gottesman S (2010) Mechanism of positive regulation by DsrA and RprA small noncoding RNAs: Pairing increases translation and protects rpoS mRNA from degradation. J Bacteriol 192(21):5559-5571.
-
(2010)
J Bacteriol
, vol.192
, Issue.21
, pp. 5559-5571
-
-
McCullen, C.A.1
Benhammou, J.N.2
Majdalani, N.3
Gottesman, S.4
-
35
-
-
84858863122
-
Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coli
-
Mika F, et al. (2012) Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coli. Mol Microbiol 84(1):51-65.
-
(2012)
Mol Microbiol
, vol.84
, Issue.1
, pp. 51-65
-
-
Mika, F.1
-
36
-
-
84864013022
-
Salmonella biofilm development depends on the phosphorylation status of RcsB
-
Latasa C, et al. (2012) Salmonella biofilm development depends on the phosphorylation status of RcsB. J Bacteriol 194(14):3708-3722.
-
(2012)
J Bacteriol
, vol.194
, Issue.14
, pp. 3708-3722
-
-
Latasa, C.1
-
37
-
-
0345276576
-
The csgD promoter, a control unit for biofilm formation in Salmonella typhimurium
-
Gerstel U, Römling U (2003) The csgD promoter, a control unit for biofilm formation in Salmonella typhimurium. Res Microbiol 154(10):659-667.
-
(2003)
Res Microbiol
, vol.154
, Issue.10
, pp. 659-667
-
-
Gerstel, U.1
Römling, U.2
-
38
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31(13):3406-3415.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.13
, pp. 3406-3415
-
-
Zuker, M.1
-
39
-
-
84859988230
-
Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA
-
Corcoran CP, et al. (2012) Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA. Mol Microbiol 84(3):428-445.
-
(2012)
Mol Microbiol
, vol.84
, Issue.3
, pp. 428-445
-
-
Corcoran, C.P.1
-
40
-
-
4644237189
-
Fast and effective prediction of microRNA/target duplexes
-
Rehmsmeier M, Steffen P, Hochsmann M, Giegerich R (2004) Fast and effective prediction of microRNA/target duplexes. RNA 10(10):1507-1517.
-
(2004)
RNA
, vol.10
, Issue.10
, pp. 1507-1517
-
-
Rehmsmeier, M.1
Steffen, P.2
Hochsmann, M.3
Giegerich, R.4
-
41
-
-
2442507109
-
Transcriptional regulation of Salmonella enterica serovar Typhimurium genes by bile
-
Prouty AM, et al. (2004) Transcriptional regulation of Salmonella enterica serovar Typhimurium genes by bile. FEMS Immunol Med Microbiol 41(2):177-185.
-
(2004)
FEMS Immunol Med Microbiol
, vol.41
, Issue.2
, pp. 177-185
-
-
Prouty, A.M.1
-
43
-
-
63049110964
-
The Rcs two-component system regulates expression of lysozyme inhibitors and is induced by exposure to lysozyme
-
Callewaert L, Vanoirbeek KG, Lurquin I, Michiels CW, Aertsen A (2009) The Rcs two-component system regulates expression of lysozyme inhibitors and is induced by exposure to lysozyme. J Bacteriol 191(6):1979-1981.
-
(2009)
J Bacteriol
, vol.191
, Issue.6
, pp. 1979-1981
-
-
Callewaert, L.1
Vanoirbeek, K.G.2
Lurquin, I.3
Michiels, C.W.4
Aertsen, A.5
-
44
-
-
40449091818
-
The Rcs phosphorelay is a cell envelope stress response activated by peptidoglycan stress and contributes to intrinsic antibiotic resistance
-
Laubacher ME, Ades SE (2008) The Rcs phosphorelay is a cell envelope stress response activated by peptidoglycan stress and contributes to intrinsic antibiotic resistance. J Bacteriol 190(6):2065-2074.
-
(2008)
J Bacteriol
, vol.190
, Issue.6
, pp. 2065-2074
-
-
Laubacher, M.E.1
Ades, S.E.2
-
45
-
-
84919922342
-
Detecting envelope stress by monitoring β-barrel assembly
-
Cho SH, et al. (2014) Detecting envelope stress by monitoring β-barrel assembly. Cell 159(7):1652-1664.
-
(2014)
Cell
, vol.159
, Issue.7
, pp. 1652-1664
-
-
Cho, S.H.1
-
46
-
-
84855798152
-
The architecture and ppGpp-dependent expression of the primary transcriptome of Salmonella typhimurium during invasion gene expression
-
Ramachandran VK, Shearer N, Jacob JJ, Sharma CM, Thompson A (2012) The architecture and ppGpp-dependent expression of the primary transcriptome of Salmonella Typhimurium during invasion gene expression. BMC Genomics 13:25.
-
(2012)
BMC Genomics
, vol.13
, pp. 25
-
-
Ramachandran, V.K.1
Shearer, N.2
Jacob, J.J.3
Sharma, C.M.4
Thompson, A.5
-
47
-
-
33846947959
-
The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase
-
Typas A, Becker G, Hengge R (2007) The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase. Mol Microbiol 63(5):1296-1306.
-
(2007)
Mol Microbiol
, vol.63
, Issue.5
, pp. 1296-1306
-
-
Typas, A.1
Becker, G.2
Hengge, R.3
-
48
-
-
0037094370
-
Construction of targeted single copy lac fusions using lambda Red and FLP-mediated site-specific recombination in bacteria
-
Ellermeier CD, Janakiraman A, Slauch JM (2002) Construction of targeted single copy lac fusions using lambda Red and FLP-mediated site-specific recombination in bacteria. Gene 290(1-2):153-161.
-
(2002)
Gene
, vol.290
, Issue.1-2
, pp. 153-161
-
-
Ellermeier, C.D.1
Janakiraman, A.2
Slauch, J.M.3
-
49
-
-
32044462728
-
The incoherent feed-forward loop accelerates the response-time of the gal system of Escherichia coli
-
Mangan S, Itzkovitz S, Zaslaver A, Alon U (2006) The incoherent feed-forward loop accelerates the response-time of the gal system of Escherichia coli. J Mol Biol 356(5):1073-1081.
-
(2006)
J Mol Biol
, vol.356
, Issue.5
, pp. 1073-1081
-
-
Mangan, S.1
Itzkovitz, S.2
Zaslaver, A.3
Alon, U.4
-
50
-
-
84928339787
-
Stress sigma factor RpoS degradation and translation are sensitive to the state of central metabolism
-
Battesti A, Majdalani N, Gottesman S (2015) Stress sigma factor RpoS degradation and translation are sensitive to the state of central metabolism. Proc Natl Acad Sci USA 112(16):5159-5164.
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, Issue.16
, pp. 5159-5164
-
-
Battesti, A.1
Majdalani, N.2
Gottesman, S.3
-
51
-
-
34249079154
-
Network motifs: Theory and experimental approaches
-
Alon U (2007) Network motifs: Theory and experimental approaches. Nat Rev Genet 8(6):450-461.
-
(2007)
Nat Rev Genet
, vol.8
, Issue.6
, pp. 450-461
-
-
Alon, U.1
-
52
-
-
78650266413
-
Chronic and acute infection of the gall bladder by Salmonella typhi: Understanding the carrier state
-
Gonzalez-Escobedo G, Marshall JM, Gunn JS (2011) Chronic and acute infection of the gall bladder by Salmonella Typhi: Understanding the carrier state. Nat Rev Microbiol 9(1):9-14.
-
(2011)
Nat Rev Microbiol
, vol.9
, Issue.1
, pp. 9-14
-
-
Gonzalez-Escobedo, G.1
Marshall, J.M.2
Gunn, J.S.3
-
53
-
-
56649102307
-
F-pili dynamics by live-cell imaging
-
Clarke M, Maddera L, Harris RL, Silverman PM (2008) F-pili dynamics by live-cell imaging. Proc Natl Acad Sci USA 105(46):17978-17981.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.46
, pp. 17978-17981
-
-
Clarke, M.1
Maddera, L.2
Harris, R.L.3
Silverman, P.M.4
-
54
-
-
30744437713
-
Characterization of the opposing roles of H-NS and TraJ in transcriptional regulation of the F-plasmid tra operon
-
Will WR, Frost LS (2006) Characterization of the opposing roles of H-NS and TraJ in transcriptional regulation of the F-plasmid tra operon. J Bacteriol 188(2):507-514.
-
(2006)
J Bacteriol
, vol.188
, Issue.2
, pp. 507-514
-
-
Will, W.R.1
Frost, L.S.2
-
55
-
-
0035172604
-
Evidence that F-plasmid proteins TraV, TraK and TraB assemble into an envelope-spanning structure in Escherichia coli
-
Harris RL, Hombs V, Silverman PM (2001) Evidence that F-plasmid proteins TraV, TraK and TraB assemble into an envelope-spanning structure in Escherichia coli. Mol Microbiol 42(3):757-766.
-
(2001)
Mol Microbiol
, vol.42
, Issue.3
, pp. 757-766
-
-
Harris, R.L.1
Hombs, V.2
Silverman, P.M.3
-
56
-
-
0028985657
-
The yeast two-hybrid system for studying protein-protein interactions
-
Luban J, Goff SP (1995) The yeast two-hybrid system for studying protein-protein interactions. Curr Opin Biotechnol 6(1):59-64.
-
(1995)
Curr Opin Biotechnol
, vol.6
, Issue.1
, pp. 59-64
-
-
Luban, J.1
Goff, S.P.2
-
57
-
-
77955155869
-
Base pairing small RNAs and their roles in global regulatory networks
-
Beisel CL, Storz G (2010) Base pairing small RNAs and their roles in global regulatory networks. FEMS Microbiol Rev 34(5):866-882.
-
(2010)
FEMS Microbiol Rev
, vol.34
, Issue.5
, pp. 866-882
-
-
Beisel, C.L.1
Storz, G.2
-
58
-
-
84883805211
-
The role of miRNAs in regulating gene expression networks
-
Gurtan AM, Sharp PA (2013) The role of miRNAs in regulating gene expression networks. J Mol Biol 425(19):3582-3600.
-
(2013)
J Mol Biol
, vol.425
, Issue.19
, pp. 3582-3600
-
-
Gurtan, A.M.1
Sharp, P.A.2
-
59
-
-
0142027814
-
Structure and function of the feed-forward loop network motif
-
Mangan S, Alon U (2003) Structure and function of the feed-forward loop network motif. Proc Natl Acad Sci USA 100(21):11980-11985.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.21
, pp. 11980-11985
-
-
Mangan, S.1
Alon, U.2
-
60
-
-
79251559383
-
The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli
-
Beisel CL, Storz G (2011) The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli. Mol Cell 41(3):286-297.
-
(2011)
Mol Cell
, vol.41
, Issue.3
, pp. 286-297
-
-
Beisel, C.L.1
Storz, G.2
-
61
-
-
84899952321
-
Interplay of transcriptional and small RNA-dependent control mechanisms regulates chitosugar uptake in Escherichia coli and Salmonella
-
Plumbridge J, Bossi L, Oberto J, Wade JT, Figueroa-Bossi N (2014) Interplay of transcriptional and small RNA-dependent control mechanisms regulates chitosugar uptake in Escherichia coli and Salmonella. Mol Microbiol 92(4):648-658.
-
(2014)
Mol Microbiol
, vol.92
, Issue.4
, pp. 648-658
-
-
Plumbridge, J.1
Bossi, L.2
Oberto, J.3
Wade, J.T.4
Figueroa-Bossi, N.5
-
62
-
-
80052799967
-
Discriminating tastes: Physiological contributions of the Hfq-binding small RNA Spot 42 to catabolite repression
-
Beisel CL, Storz G (2011) Discriminating tastes: Physiological contributions of the Hfq-binding small RNA Spot 42 to catabolite repression. RNA Biol 8(5):766-770.
-
(2011)
RNA Biol
, vol.8
, Issue.5
, pp. 766-770
-
-
Beisel, C.L.1
Storz, G.2
-
63
-
-
3843080648
-
An active type IV secretion system encoded by the F plasmid sensitizes Escherichia coli to bile salts
-
Bidlack JE, Silverman PM (2004) An active type IV secretion system encoded by the F plasmid sensitizes Escherichia coli to bile salts. J Bacteriol 186(16):5202-5209.
-
(2004)
J Bacteriol
, vol.186
, Issue.16
, pp. 5202-5209
-
-
Bidlack, J.E.1
Silverman, P.M.2
-
64
-
-
84857467931
-
Adaptation and pre-adaptation of Salmonella enterica to bile
-
Hernández SB, Cota I, Ducret A, Aussel L, Casadesús J (2012) Adaptation and pre-adaptation of Salmonella enterica to bile. PLoS Genet 8(1):e1002459.
-
(2012)
PLoS Genet
, vol.8
, Issue.1
-
-
Hernández, S.B.1
Cota, I.2
Ducret, A.3
Aussel, L.4
Casadesús, J.5
-
65
-
-
37749018166
-
Activation of the Cpx regulon destabilizes the F plasmid transfer activator, TraJ, via the HslVU protease in Escherichia coli
-
Lau-Wong IC, Locke T, Ellison MJ, Raivio TL, Frost LS (2008) Activation of the Cpx regulon destabilizes the F plasmid transfer activator, TraJ, via the HslVU protease in Escherichia coli. Mol Microbiol 67(3):516-527.
-
(2008)
Mol Microbiol
, vol.67
, Issue.3
, pp. 516-527
-
-
Lau-Wong, I.C.1
Locke, T.2
Ellison, M.J.3
Raivio, T.L.4
Frost, L.S.5
-
66
-
-
84901483005
-
S-controlled small RNAs in Salmonella
-
S-controlled small RNAs in Salmonella. PLoS One 9(5):e96918.
-
(2014)
PLoS One
, vol.9
, Issue.5
-
-
Lévi-Meyrueis, C.1
-
67
-
-
14244256556
-
Genome-wide analysis of the general stress response network in Escherichia coli: SigmaS-dependent genes, promoters, and sigma factor selectivity
-
Weber H, Polen T, Heuveling J, Wendisch VF, Hengge R (2005) Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. J Bacteriol 187(5):1591-1603.
-
(2005)
J Bacteriol
, vol.187
, Issue.5
, pp. 1591-1603
-
-
Weber, H.1
Polen, T.2
Heuveling, J.3
Wendisch, V.F.4
Hengge, R.5
-
68
-
-
84858866772
-
A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli
-
Thomason MK, Fontaine F, De Lay N, Storz G (2012) A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli. Mol Microbiol 84(1):17-35.
-
(2012)
Mol Microbiol
, vol.84
, Issue.1
, pp. 17-35
-
-
Thomason, M.K.1
Fontaine, F.2
De Lay, N.3
Storz, G.4
-
69
-
-
0026663301
-
Surface exclusion specificity of the TraT lipoprotein is determined by single alterations in a five-amino-acid region of the protein
-
Harrison JL, Taylor IM, Platt K, O'Connor CD (1992) Surface exclusion specificity of the TraT lipoprotein is determined by single alterations in a five-amino-acid region of the protein. Mol Microbiol 6(19):2825-2832.
-
(1992)
Mol Microbiol
, vol.6
, Issue.19
, pp. 2825-2832
-
-
Harrison, J.L.1
Taylor, I.M.2
Platt, K.3
O'Connor, C.D.4
-
70
-
-
22644442538
-
HilD, HilC and RtsA constitute a feed forward loop that controls expression of the SPI1 type three secretion system regulator hilA in Salmonella enterica serovar Typhimurium
-
Ellermeier CD, Ellermeier JR, Slauch JM (2005) HilD, HilC and RtsA constitute a feed forward loop that controls expression of the SPI1 type three secretion system regulator hilA in Salmonella enterica serovar Typhimurium. Mol Microbiol 57(3):691-705.
-
(2005)
Mol Microbiol
, vol.57
, Issue.3
, pp. 691-705
-
-
Ellermeier, C.D.1
Ellermeier, J.R.2
Slauch, J.M.3
-
71
-
-
84876234571
-
Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis
-
Papenfort K, Sun Y, Miyakoshi M, Vanderpool CK, Vogel J (2013) Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis. Cell 153(2): 426-437.
-
(2013)
Cell
, vol.153
, Issue.2
, pp. 426-437
-
-
Papenfort, K.1
Sun, Y.2
Miyakoshi, M.3
Vanderpool, C.K.4
Vogel, J.5
-
72
-
-
84858860817
-
A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD
-
Fröhlich KS, Papenfort K, Berger AA, Vogel J (2012) A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD. Nucleic Acids Res 40(8):3623-3640.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.8
, pp. 3623-3640
-
-
Fröhlich, K.S.1
Papenfort, K.2
Berger, A.A.3
Vogel, J.4
-
73
-
-
84922440514
-
Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation
-
Papenfort K, Förstner KU, Cong JP, Sharma CM, Bassler BL (2015) Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation. Proc Natl Acad Sci USA 112(7):E766-E775.
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, Issue.7
, pp. E766-E775
-
-
Papenfort, K.1
Förstner, K.U.2
Cong, J.P.3
Sharma, C.M.4
Bassler, B.L.5
-
74
-
-
70350433251
-
Salmonella type III secretion effector SlrP is an E3 ubiquitin ligase for mammalian thioredoxin
-
Bernal-Bayard J, Ramos-Morales F (2009) Salmonella type III secretion effector SlrP is an E3 ubiquitin ligase for mammalian thioredoxin. J Biol Chem 284(40):27587-27595.
-
(2009)
J Biol Chem
, vol.284
, Issue.40
, pp. 27587-27595
-
-
Bernal-Bayard, J.1
Ramos-Morales, F.2
-
75
-
-
0029018327
-
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter
-
Guzman LM, Belin D, Carson MJ, Beckwith J (1995) Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter. J Bacteriol 177(14):4121-4130.
-
(1995)
J Bacteriol
, vol.177
, Issue.14
, pp. 4121-4130
-
-
Guzman, L.M.1
Belin, D.2
Carson, M.J.3
Beckwith, J.4
-
76
-
-
0030861452
-
Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements
-
Lutz R, Bujard H (1997) Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements. Nucleic Acids Res 25(6):1203-1210.
-
(1997)
Nucleic Acids Res
, vol.25
, Issue.6
, pp. 1203-1210
-
-
Lutz, R.1
Bujard, H.2
-
77
-
-
2142854105
-
Single-copy green fluorescent protein gene fusions allow accurate measurement of Salmonella gene expression in vitro and during infection of mammalian cells
-
Hautefort I, Proença MJ, Hinton JC (2003) Single-copy green fluorescent protein gene fusions allow accurate measurement of Salmonella gene expression in vitro and during infection of mammalian cells. Appl Environ Microbiol 69(12):7480-7491.
-
(2003)
Appl Environ Microbiol
, vol.69
, Issue.12
, pp. 7480-7491
-
-
Hautefort, I.1
Proença, M.J.2
Hinton, J.C.3
-
78
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko KA, Wanner BL (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97(12):6640-6645.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, Issue.12
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
79
-
-
42549165769
-
Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis
-
Papenfort K, et al. (2008) Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis. Mol Microbiol 68(4):890-906.
-
(2008)
Mol Microbiol
, vol.68
, Issue.4
, pp. 890-906
-
-
Papenfort, K.1
-
80
-
-
0035910078
-
Epitope tagging of chromosomal genes in Salmonella
-
Uzzau S, Figueroa-Bossi N, Rubino S, Bossi L (2001) Epitope tagging of chromosomal genes in Salmonella. Proc Natl Acad Sci USA 98(26):15264-15269.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, Issue.26
, pp. 15264-15269
-
-
Uzzau, S.1
Figueroa-Bossi, N.2
Rubino, S.3
Bossi, L.4
-
81
-
-
0344237410
-
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria
-
Vogel J, et al. (2003) RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria. Nucleic Acids Res 31(22):6435-6443.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.22
, pp. 6435-6443
-
-
Vogel, J.1
-
82
-
-
0036225054
-
Envelope instability in DNA adenine methylase mutants of Salmonella enterica
-
Pucciarelli MG, Prieto AI, Casadesús J, García-del Portillo F (2002) Envelope instability in DNA adenine methylase mutants of Salmonella enterica. Microbiology 148(Pt 4):1171-1182.
-
(2002)
Microbiology
, vol.148
, Issue.4
, pp. 1171-1182
-
-
Pucciarelli, M.G.1
Prieto, A.I.2
Casadesús, J.3
García-del Portillo, F.4
-
83
-
-
0019407618
-
Aromatic-dependent Salmonella typhimurium are non-virulent and effective as live vaccines
-
Hoiseth SK, Stocker BA (1981) Aromatic-dependent Salmonella typhimurium are non-virulent and effective as live vaccines. Nature 291(5812):238-239.
-
(1981)
Nature
, vol.291
, Issue.5812
, pp. 238-239
-
-
Hoiseth, S.K.1
Stocker, B.A.2
-
84
-
-
79551474108
-
Virulence plasmid interchange between strains ATCC 14028, LT2, and SL1344 of Salmonella enterica serovar Typhimurium
-
García-Quintanilla M, Casadesús J (2011) Virulence plasmid interchange between strains ATCC 14028, LT2, and SL1344 of Salmonella enterica serovar Typhimurium. Plasmid 65(2):169-175.
-
(2011)
Plasmid
, vol.65
, Issue.2
, pp. 169-175
-
-
García-Quintanilla, M.1
Casadesús, J.2
-
85
-
-
33845713571
-
The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium
-
Sittka A, Pfeiffer V, Tedin K, Vogel J (2007) The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium. Mol Microbiol 63(1):193-217.
-
(2007)
Mol Microbiol
, vol.63
, Issue.1
, pp. 193-217
-
-
Sittka, A.1
Pfeiffer, V.2
Tedin, K.3
Vogel, J.4
|